EP3904527A4 - Method and device for fixed-point editing of nucleotide sequence stored with data - Google Patents

Method and device for fixed-point editing of nucleotide sequence stored with data Download PDF

Info

Publication number
EP3904527A4
EP3904527A4 EP18944810.3A EP18944810A EP3904527A4 EP 3904527 A4 EP3904527 A4 EP 3904527A4 EP 18944810 A EP18944810 A EP 18944810A EP 3904527 A4 EP3904527 A4 EP 3904527A4
Authority
EP
European Patent Office
Prior art keywords
data
fixed
nucleotide sequence
sequence stored
point editing
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
EP18944810.3A
Other languages
German (de)
French (fr)
Other versions
EP3904527A1 (en
Inventor
Zhi PING
Xiaoluo HUANG
Shihong CHEN
Chen CHAI
Yue Shen
Xun Xu
Huanming Yang
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
BGI Shenzhen Co Ltd
Original Assignee
BGI Shenzhen Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by BGI Shenzhen Co Ltd filed Critical BGI Shenzhen Co Ltd
Publication of EP3904527A1 publication Critical patent/EP3904527A1/en
Publication of EP3904527A4 publication Critical patent/EP3904527A4/en
Pending legal-status Critical Current

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Classifications

    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N3/00—Computing arrangements based on biological models
    • G06N3/12—Computing arrangements based on biological models using genetic models
    • G06N3/123—DNA computing
    • G—PHYSICS
    • G11—INFORMATION STORAGE
    • G11C—STATIC STORES
    • G11C13/00—Digital stores characterised by the use of storage elements not covered by groups G11C11/00, G11C23/00, or G11C25/00
    • G11C13/0002—Digital stores characterised by the use of storage elements not covered by groups G11C11/00, G11C23/00, or G11C25/00 using resistive RAM [RRAM] elements
    • G11C13/0009—RRAM elements whose operation depends upon chemical change
    • G11C13/0014—RRAM elements whose operation depends upon chemical change comprising cells based on organic memory material
    • G11C13/0019—RRAM elements whose operation depends upon chemical change comprising cells based on organic memory material comprising bio-molecules
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay

Landscapes

  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Organic Chemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Computational Linguistics (AREA)
  • Biomedical Technology (AREA)
  • Data Mining & Analysis (AREA)
  • Evolutionary Computation (AREA)
  • Computing Systems (AREA)
  • General Physics & Mathematics (AREA)
  • Mathematical Physics (AREA)
  • Software Systems (AREA)
  • Artificial Intelligence (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
EP18944810.3A 2018-12-26 2018-12-26 Method and device for fixed-point editing of nucleotide sequence stored with data Pending EP3904527A4 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/CN2018/123858 WO2020132935A1 (en) 2018-12-26 2018-12-26 Method and device for fixed-point editing of nucleotide sequence stored with data

Publications (2)

Publication Number Publication Date
EP3904527A1 EP3904527A1 (en) 2021-11-03
EP3904527A4 true EP3904527A4 (en) 2022-08-10

Family

ID=71125899

Family Applications (1)

Application Number Title Priority Date Filing Date
EP18944810.3A Pending EP3904527A4 (en) 2018-12-26 2018-12-26 Method and device for fixed-point editing of nucleotide sequence stored with data

Country Status (4)

Country Link
US (1) US20220064705A1 (en)
EP (1) EP3904527A4 (en)
CN (1) CN113228193B (en)
WO (1) WO2020132935A1 (en)

Families Citing this family (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2017363146B2 (en) 2016-11-16 2023-11-02 Catalog Technologies, Inc. Systems for nucleic acid-based data storage
JP7364604B2 (en) 2018-03-16 2023-10-18 カタログ テクノロジーズ， インコーポレイテッド Chemical methods for nucleic acid-based data storage
EP3966823A1 (en) 2019-05-09 2022-03-16 Catalog Technologies, Inc. Data structures and operations for searching, computing, and indexing in dna-based data storage
CA3157804A1 (en) 2019-10-11 2021-04-15 Catalog Technologies, Inc. Nucleic acid security and authentication
AU2022245140A1 (en) * 2021-03-24 2023-09-28 Catalog Technologies, Inc. Fixed point number representation and computation circuits
EP4451278A1 (en) * 2021-12-17 2024-10-23 BGI Shenzhen Method and system for storing information using dna
CN114758703B (en) * 2022-06-14 2022-09-13 深圳先进技术研究院 Data information storage method based on recombinant plasmid DNA molecules
CN114958828B (en) * 2022-06-14 2024-04-19 深圳先进技术研究院 Data information storage method based on DNA molecular medium

Citations (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2013178801A2 (en) * 2012-06-01 2013-12-05 European Molecular Biology Laboratory High-capacity storage of digital information in dna
WO2014014991A2 (en) * 2012-07-19 2014-01-23 President And Fellows Of Harvard College Methods of storing information using nucleic acids
WO2017083177A1 (en) * 2015-11-13 2017-05-18 Microsoft Technology Licensing, Llc Error correction for nucleotide data stores
WO2018081566A1 (en) * 2016-10-28 2018-05-03 Integrated Dna Technologies, Inc. Dna data storage using reusable nucleic acids
WO2018094115A1 (en) * 2016-11-16 2018-05-24 Catalog Technologies, Inc. Systems for nucleic acid-based data storage
WO2018132457A1 (en) * 2017-01-10 2018-07-19 Roswell Biotechnologies, Inc. Methods and systems for dna data storage
WO2018148260A1 (en) * 2017-02-13 2018-08-16 Thomson Licensing Apparatus, method and system for digital information storage in deoxyribonucleic acid (dna)
WO2018156792A1 (en) * 2017-02-22 2018-08-30 Twist Bioscience Corporation Nucleic acid based data storage

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102682226B (en) * 2012-04-18 2015-09-30 盛司潼 A kind of nucleic acid sequencing information handling system and method
CN105022935A (en) * 2014-04-22 2015-11-04 中国科学院青岛生物能源与过程研究所 Encoding method and decoding method for performing information storage by means of DNA
CN104293941B (en) * 2014-09-30 2017-01-11 天津华大基因科技有限公司 Method for constructing sequencing library and application of sequencing library
CN104850760B (en) * 2015-03-27 2016-12-21 苏州泓迅生物科技有限公司 The information storing and reading method of artificial-synthetic DNA's storage medium
US10650312B2 (en) * 2016-11-16 2020-05-12 Catalog Technologies, Inc. Nucleic acid-based data storage
CN106845158A (en) * 2017-02-17 2017-06-13 苏州泓迅生物科技股份有限公司 A kind of method that information Store is carried out using DNA

Patent Citations (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2013178801A2 (en) * 2012-06-01 2013-12-05 European Molecular Biology Laboratory High-capacity storage of digital information in dna
WO2014014991A2 (en) * 2012-07-19 2014-01-23 President And Fellows Of Harvard College Methods of storing information using nucleic acids
WO2017083177A1 (en) * 2015-11-13 2017-05-18 Microsoft Technology Licensing, Llc Error correction for nucleotide data stores
WO2018081566A1 (en) * 2016-10-28 2018-05-03 Integrated Dna Technologies, Inc. Dna data storage using reusable nucleic acids
WO2018094115A1 (en) * 2016-11-16 2018-05-24 Catalog Technologies, Inc. Systems for nucleic acid-based data storage
WO2018132457A1 (en) * 2017-01-10 2018-07-19 Roswell Biotechnologies, Inc. Methods and systems for dna data storage
WO2018148260A1 (en) * 2017-02-13 2018-08-16 Thomson Licensing Apparatus, method and system for digital information storage in deoxyribonucleic acid (dna)
WO2018156792A1 (en) * 2017-02-22 2018-08-30 Twist Bioscience Corporation Nucleic acid based data storage

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
See also references of WO2020132935A1 *

Also Published As

Publication number Publication date
EP3904527A1 (en) 2021-11-03
US20220064705A1 (en) 2022-03-03
CN113228193A (en) 2021-08-06
CN113228193B (en) 2023-06-09
WO2020132935A1 (en) 2020-07-02

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