EP3345003A4 - Identification de protéines en l'absence d'identifications de peptides - Google Patents
Identification de protéines en l'absence d'identifications de peptides Download PDFInfo
- Publication number
- EP3345003A4 EP3345003A4 EP16840911.8A EP16840911A EP3345003A4 EP 3345003 A4 EP3345003 A4 EP 3345003A4 EP 16840911 A EP16840911 A EP 16840911A EP 3345003 A4 EP3345003 A4 EP 3345003A4
- Authority
- EP
- European Patent Office
- Prior art keywords
- proteins
- absence
- identification
- peptide identifications
- identifications
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6803—General methods of protein analysis not limited to specific proteins or families of proteins
- G01N33/6848—Methods of protein analysis involving mass spectrometry
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/10—Signal processing, e.g. from mass spectrometry [MS] or from PCR
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
-
- H—ELECTRICITY
- H01—ELECTRIC ELEMENTS
- H01J—ELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
- H01J49/00—Particle spectrometers or separator tubes
- H01J49/0027—Methods for using particle spectrometers
- H01J49/0036—Step by step routines describing the handling of the data generated during a measurement
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US201562212282P | 2015-08-31 | 2015-08-31 | |
PCT/IB2016/054990 WO2017037563A1 (fr) | 2015-08-31 | 2016-08-19 | Identification de protéines en l'absence d'identifications de peptides |
Publications (2)
Publication Number | Publication Date |
---|---|
EP3345003A1 EP3345003A1 (fr) | 2018-07-11 |
EP3345003A4 true EP3345003A4 (fr) | 2019-05-15 |
Family
ID=58188507
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP16840911.8A Withdrawn EP3345003A4 (fr) | 2015-08-31 | 2016-08-19 | Identification de protéines en l'absence d'identifications de peptides |
Country Status (2)
Country | Link |
---|---|
EP (1) | EP3345003A4 (fr) |
WO (1) | WO2017037563A1 (fr) |
Families Citing this family (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
JP7386234B2 (ja) * | 2018-08-31 | 2023-11-24 | ディーエイチ テクノロジーズ デベロップメント プライベート リミテッド | 複合試料内の関連化合物の同定およびスコア化 |
KR20200087700A (ko) * | 2019-01-11 | 2020-07-21 | 난토믹스, 엘엘씨 | 질량 분석법에 의한 sdhb 단백질 발현의 평가 |
Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2005057208A1 (fr) * | 2003-12-03 | 2005-06-23 | Prolexys Pharmaceuticals, Inc. | Procede d'identification de peptides et de proteines |
US20120049058A1 (en) * | 2009-05-08 | 2012-03-01 | Grothe Jr Robert A | Methods and Systems for Matching Product Ions to Precursor in Tandem Mass Spectrometry |
WO2012035412A2 (fr) * | 2010-09-15 | 2012-03-22 | Dh Technologies Development Pte. Ltd. | Acquisition indépendante des données d'appariement de bibliothèque de spectres de production et de spectres de référence |
US8530831B1 (en) * | 2012-03-13 | 2013-09-10 | Wisconsin Alumni Research Foundation | Probability-based mass spectrometry data acquisition |
WO2014195783A1 (fr) * | 2013-06-05 | 2014-12-11 | Dh Technologies Development Pte. Ltd. | Techniques d'acquisition swathtm indépendantes des données pour la détection de contaminants protéiques issus des cellules hôtes dans des produits protéiques biothérapiques |
Family Cites Families (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US8063359B2 (en) * | 2007-10-08 | 2011-11-22 | University Of Central Florida Research Foundation, Inc. | Systems and methods for identifying substances contained in a material |
-
2016
- 2016-08-19 EP EP16840911.8A patent/EP3345003A4/fr not_active Withdrawn
- 2016-08-19 WO PCT/IB2016/054990 patent/WO2017037563A1/fr active Application Filing
Patent Citations (6)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2005057208A1 (fr) * | 2003-12-03 | 2005-06-23 | Prolexys Pharmaceuticals, Inc. | Procede d'identification de peptides et de proteines |
US20120049058A1 (en) * | 2009-05-08 | 2012-03-01 | Grothe Jr Robert A | Methods and Systems for Matching Product Ions to Precursor in Tandem Mass Spectrometry |
WO2012035412A2 (fr) * | 2010-09-15 | 2012-03-22 | Dh Technologies Development Pte. Ltd. | Acquisition indépendante des données d'appariement de bibliothèque de spectres de production et de spectres de référence |
US20150144778A1 (en) * | 2010-09-15 | 2015-05-28 | Ronald F. Bonner | Data Independent Acquisition of Product Ion Spectra and Reference Spectra Library Matching |
US8530831B1 (en) * | 2012-03-13 | 2013-09-10 | Wisconsin Alumni Research Foundation | Probability-based mass spectrometry data acquisition |
WO2014195783A1 (fr) * | 2013-06-05 | 2014-12-11 | Dh Technologies Development Pte. Ltd. | Techniques d'acquisition swathtm indépendantes des données pour la détection de contaminants protéiques issus des cellules hôtes dans des produits protéiques biothérapiques |
Non-Patent Citations (3)
Title |
---|
L. C. GILLET ET AL: "Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis", MOLECULAR & CELLULAR PROTEOMICS, vol. 11, no. 6, 18 January 2012 (2012-01-18), XP055201307, ISSN: 1535-9476, DOI: 10.1074/mcp.O111.016717 * |
See also references of WO2017037563A1 * |
YING S. TING ET AL: "Peptide-Centric Proteome Analysis: An Alternative Strategy for the Analysis of Tandem Mass Spectrometry Data", MOLECULAR & CELLULAR PROTEOMICS, vol. 14, no. 9, 27 July 2015 (2015-07-27), US, pages 2301 - 2307, XP055574543, ISSN: 1535-9476, DOI: 10.1074/mcp.O114.047035 * |
Also Published As
Publication number | Publication date |
---|---|
EP3345003A1 (fr) | 2018-07-11 |
WO2017037563A1 (fr) | 2017-03-09 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: THE INTERNATIONAL PUBLICATION HAS BEEN MADE |
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PUAI | Public reference made under article 153(3) epc to a published international application that has entered the european phase |
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STAA | Information on the status of an ep patent application or granted ep patent |
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17P | Request for examination filed |
Effective date: 20180322 |
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AK | Designated contracting states |
Kind code of ref document: A1 Designated state(s): AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR |
|
AX | Request for extension of the european patent |
Extension state: BA ME |
|
DAV | Request for validation of the european patent (deleted) | ||
DAX | Request for extension of the european patent (deleted) | ||
A4 | Supplementary search report drawn up and despatched |
Effective date: 20190411 |
|
RIC1 | Information provided on ipc code assigned before grant |
Ipc: G01N 33/68 20060101AFI20190405BHEP Ipc: G16B 40/00 20190101ALI20190405BHEP Ipc: H01J 49/00 20060101ALI20190405BHEP |
|
STAA | Information on the status of an ep patent application or granted ep patent |
Free format text: STATUS: THE APPLICATION IS DEEMED TO BE WITHDRAWN |
|
18D | Application deemed to be withdrawn |
Effective date: 20210302 |