EP3234841A4 - Computer-implemented system and method for identifying similar patients - Google Patents

Computer-implemented system and method for identifying similar patients Download PDF

Info

Publication number
EP3234841A4
EP3234841A4 EP15871055.8A EP15871055A EP3234841A4 EP 3234841 A4 EP3234841 A4 EP 3234841A4 EP 15871055 A EP15871055 A EP 15871055A EP 3234841 A4 EP3234841 A4 EP 3234841A4
Authority
EP
European Patent Office
Prior art keywords
computer
implemented system
identifying similar
similar patients
patients
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
EP15871055.8A
Other languages
German (de)
French (fr)
Other versions
EP3234841A1 (en
Inventor
Gaurav Singal
Mary Pat Lancelotta
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Foundation Medicine Inc
Original Assignee
Foundation Medicine Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Foundation Medicine Inc filed Critical Foundation Medicine Inc
Publication of EP3234841A1 publication Critical patent/EP3234841A1/en
Publication of EP3234841A4 publication Critical patent/EP3234841A4/en
Pending legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H80/00—ICT specially adapted for facilitating communication between medical practitioners or patients, e.g. for collaborative diagnosis, therapy or health monitoring
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • G16B50/10—Ontologies; Annotations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/60—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for patient-specific data, e.g. for electronic patient records
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/70—ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for mining of medical data, e.g. analysing previous cases of other patients

Landscapes

  • Engineering & Computer Science (AREA)
  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biophysics (AREA)
  • Databases & Information Systems (AREA)
  • Public Health (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Bioethics (AREA)
  • Chemical & Material Sciences (AREA)
  • Epidemiology (AREA)
  • Primary Health Care (AREA)
  • Analytical Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Pathology (AREA)
  • Data Mining & Analysis (AREA)
  • Medical Treatment And Welfare Office Work (AREA)
EP15871055.8A 2014-12-17 2015-12-17 Computer-implemented system and method for identifying similar patients Pending EP3234841A4 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201462093397P 2014-12-17 2014-12-17
PCT/US2015/066325 WO2016100638A1 (en) 2014-12-17 2015-12-17 Computer-implemented system and method for identifying similar patients

Publications (2)

Publication Number Publication Date
EP3234841A1 EP3234841A1 (en) 2017-10-25
EP3234841A4 true EP3234841A4 (en) 2018-08-29

Family

ID=56127583

Family Applications (1)

Application Number Title Priority Date Filing Date
EP15871055.8A Pending EP3234841A4 (en) 2014-12-17 2015-12-17 Computer-implemented system and method for identifying similar patients

Country Status (5)

Country Link
EP (1) EP3234841A4 (en)
AU (2) AU2015364605B2 (en)
CA (1) CA2970931C (en)
HK (1) HK1245444A1 (en)
WO (1) WO2016100638A1 (en)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP6991134B2 (en) 2015-10-09 2022-01-12 ガーダント ヘルス， インコーポレイテッド Population-based treatment recommendations using cell-free DNA
CN109072309B (en) 2016-02-02 2023-05-16 夸登特健康公司 Cancer evolution detection and diagnosis
US20190362807A1 (en) * 2016-09-29 2019-11-28 Koninklijke Philips N.V. Genomic variant ranking system for clinical trial matching
WO2018192831A1 (en) 2017-04-20 2018-10-25 Koninklijke Philips N.V. Learning and applying contextual similarities between entities
CN111512395A (en) 2017-12-19 2020-08-07 皇家飞利浦有限公司 Learning and applying background similarity between entities

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20140336943A1 (en) * 2013-01-05 2014-11-13 Foundation Medicine, Inc. System and method for managing genomic testing results

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20020052761A1 (en) * 2000-05-11 2002-05-02 Fey Christopher T. Method and system for genetic screening data collection, analysis, report generation and access
US20090287503A1 (en) * 2008-05-16 2009-11-19 International Business Machines Corporation Analysis of individual and group healthcare data in order to provide real time healthcare recommendations

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20140336943A1 (en) * 2013-01-05 2014-11-13 Foundation Medicine, Inc. System and method for managing genomic testing results

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
ALBERT-LÁSZLÓ BARABÁSI ET AL: "Network medicine: a network-based approach to human disease", NATURE REVIEWS GENETICS, vol. 12, no. 1, 20 July 2011 (2011-07-20), GB, pages 56 - 68, XP055407343, ISSN: 1471-0056, DOI: 10.1038/nrg2918 *
ANONYMOUS: "Graph database - Wikipedia", 7 December 2014 (2014-12-07), XP055488065, Retrieved from the Internet <URL:https://en.wikipedia.org/w/index.php?title=Graph_database&oldid=637006716> [retrieved on 20180626] *
G. BEBEK ET AL: "Network biology methods integrating biological data for translational science", BRIEFINGS IN BIOINFORMATICS., vol. 13, no. 4, 5 March 2012 (2012-03-05), GB, pages 446 - 459, XP055407350, ISSN: 1467-5463, DOI: 10.1093/bib/bbr075 *
See also references of WO2016100638A1 *

Also Published As

Publication number Publication date
WO2016100638A1 (en) 2016-06-23
AU2021202244A1 (en) 2021-05-13
AU2021202244B2 (en) 2023-02-16
EP3234841A1 (en) 2017-10-25
HK1245444A1 (en) 2018-08-24
CA2970931C (en) 2023-05-23
CA2970931A1 (en) 2016-06-23
AU2015364605A1 (en) 2017-05-25
AU2015364605B2 (en) 2021-01-28

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