EP3226163A4 - Procédé de création de modèle de prédiction de trait et procédé de prédiction de trait - Google Patents

Procédé de création de modèle de prédiction de trait et procédé de prédiction de trait Download PDF

Info

Publication number
EP3226163A4
EP3226163A4 EP15862302.5A EP15862302A EP3226163A4 EP 3226163 A4 EP3226163 A4 EP 3226163A4 EP 15862302 A EP15862302 A EP 15862302A EP 3226163 A4 EP3226163 A4 EP 3226163A4
Authority
EP
European Patent Office
Prior art keywords
trait prediction
model creation
trait
prediction model
creation method
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP15862302.5A
Other languages
German (de)
English (en)
Other versions
EP3226163A1 (fr
Inventor
Tsuyoshi HACHIYA
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Iwate Medical University
Original Assignee
Iwate Medical University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Iwate Medical University filed Critical Iwate Medical University
Publication of EP3226163A1 publication Critical patent/EP3226163A1/fr
Publication of EP3226163A4 publication Critical patent/EP3226163A4/fr
Withdrawn legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06N—COMPUTING ARRANGEMENTS BASED ON SPECIFIC COMPUTATIONAL MODELS
    • G06N7/00—Computing arrangements based on specific mathematical models
    • G06N7/01—Probabilistic graphical models, e.g. probabilistic networks
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F17/00—Digital computing or data processing equipment or methods, specially adapted for specific functions
    • G06F17/10—Complex mathematical operations
    • G06F17/16—Matrix or vector computation, e.g. matrix-matrix or matrix-vector multiplication, matrix factorization
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/40—Population genetics; Linkage disequilibrium
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
    • G16B5/20—Probabilistic models
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16H—HEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H10/00—ICT specially adapted for the handling or processing of patient-related medical or healthcare data
    • G16H10/60—ICT specially adapted for the handling or processing of patient-related medical or healthcare data for patient-specific data, e.g. for electronic patient records

Landscapes

  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Theoretical Computer Science (AREA)
  • Medical Informatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Evolutionary Biology (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Physiology (AREA)
  • Chemical & Material Sciences (AREA)
  • General Physics & Mathematics (AREA)
  • Data Mining & Analysis (AREA)
  • Mathematical Physics (AREA)
  • Software Systems (AREA)
  • Public Health (AREA)
  • Epidemiology (AREA)
  • Mathematical Analysis (AREA)
  • Mathematical Optimization (AREA)
  • Pure & Applied Mathematics (AREA)
  • Computational Mathematics (AREA)
  • Databases & Information Systems (AREA)
  • Artificial Intelligence (AREA)
  • Evolutionary Computation (AREA)
  • Probability & Statistics with Applications (AREA)
  • General Engineering & Computer Science (AREA)
  • Algebra (AREA)
  • Computing Systems (AREA)
  • Primary Health Care (AREA)
  • Bioethics (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Ecology (AREA)
EP15862302.5A 2014-11-25 2015-11-25 Procédé de création de modèle de prédiction de trait et procédé de prédiction de trait Withdrawn EP3226163A4 (fr)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
JP2014238252A JP6312253B2 (ja) 2014-11-25 2014-11-25 形質予測モデル作成方法および形質予測方法
PCT/JP2015/083068 WO2016084844A1 (fr) 2014-11-25 2015-11-25 Procédé de création de modèle de prédiction de trait et procédé de prédiction de trait

Publications (2)

Publication Number Publication Date
EP3226163A1 EP3226163A1 (fr) 2017-10-04
EP3226163A4 true EP3226163A4 (fr) 2018-08-29

Family

ID=56074396

Family Applications (1)

Application Number Title Priority Date Filing Date
EP15862302.5A Withdrawn EP3226163A4 (fr) 2014-11-25 2015-11-25 Procédé de création de modèle de prédiction de trait et procédé de prédiction de trait

Country Status (5)

Country Link
US (2) US20170337483A1 (fr)
EP (1) EP3226163A4 (fr)
JP (1) JP6312253B2 (fr)
CN (1) CN107004066B (fr)
WO (1) WO2016084844A1 (fr)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP6716143B2 (ja) * 2016-10-12 2020-07-01 学校法人 岩手医科大学 脳梗塞発症リスクの予測モデル作成方法および予測方法
CN107545153B (zh) * 2017-10-25 2021-06-11 桂林电子科技大学 一种基于卷积神经网络的核小体分类预测方法
US20220101147A1 (en) * 2018-12-28 2022-03-31 Osaka University System and method for predicting trait information of individuals
JP2020154179A (ja) * 2019-03-20 2020-09-24 ヤフー株式会社 情報処理装置、情報処理方法および情報処理プログラム
JP2020154178A (ja) * 2019-03-20 2020-09-24 ヤフー株式会社 情報処理装置、情報処理方法および情報処理プログラム
CN111028883B (zh) * 2019-11-20 2023-07-18 广州达美智能科技有限公司 基于布尔代数的基因处理方法、装置及可读存储介质
CN111199773B (zh) * 2020-01-20 2023-03-28 中国农业科学院北京畜牧兽医研究所 一种精细定位性状关联基因组纯合片段的评估方法
EP4158638A4 (fr) * 2020-05-27 2023-11-29 23Andme, Inc. Plate-forme d'apprentissage automatique pour génération de modèles de risque
US10966170B1 (en) 2020-09-02 2021-03-30 The Trade Desk, Inc. Systems and methods for generating and querying an index associated with targeted communications
CN114496076B (zh) * 2022-04-01 2022-07-05 微岩医学科技(北京)有限公司 一种基因组遗传分层联合分析方法及系统

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20130246033A1 (en) * 2012-03-14 2013-09-19 Microsoft Corporation Predicting phenotypes of a living being in real-time
US20140066320A1 (en) * 2012-09-04 2014-03-06 Microsoft Corporation Identifying causal genetic markers for a specified phenotype

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2006503346A (ja) * 2001-12-03 2006-01-26 ディーエヌエー・プリント・ジェノミックス・インコーポレイテッド 分類ツリー分析を含む遺伝子学的分類における使用のための方法および装置
JP2008152592A (ja) * 2006-12-19 2008-07-03 Hitachi Ltd 個体間の遺伝的非類似度の解析方法およびシステム
FR2934698B1 (fr) * 2008-08-01 2011-11-18 Commissariat Energie Atomique Procede de prediction pour le pronostic ou le diagnostic ou la reponse therapeutique d'une maladie et notamment du cancer de la prostate et dispositif permettant la mise en oeuvre du procede.
JP5852902B2 (ja) * 2012-02-27 2016-02-03 株式会社エヌ・ティ・ティ・データ 遺伝子間相互作用解析システム、その方法及びプログラム

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20130246033A1 (en) * 2012-03-14 2013-09-19 Microsoft Corporation Predicting phenotypes of a living being in real-time
US20140066320A1 (en) * 2012-09-04 2014-03-06 Microsoft Corporation Identifying causal genetic markers for a specified phenotype

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
See also references of WO2016084844A1 *

Also Published As

Publication number Publication date
CN107004066B (zh) 2020-10-23
EP3226163A1 (fr) 2017-10-04
JP2016099901A (ja) 2016-05-30
JP6312253B2 (ja) 2018-04-18
CN107004066A (zh) 2017-08-01
WO2016084844A1 (fr) 2016-06-02
US20170337483A1 (en) 2017-11-23
US20200342342A1 (en) 2020-10-29

Similar Documents

Publication Publication Date Title
EP3177502B8 (fr) Dispositif de commande intégrale de train et méthode correspondante
GB2524060B (en) Controller and method
EP3219467A4 (fr) Appareil de fabrication et procédé de fabrication
EP3226163A4 (fr) Procédé de création de modèle de prédiction de trait et procédé de prédiction de trait
EP3226451A4 (fr) Dispositif et procédé
EP3195926A4 (fr) Dispositif et procédé pour la fabrication d'eau avec un gaz dissous
EP3182322A4 (fr) Procédé de capture d'écran et appareil
EP3136787A4 (fr) Dispositif et procédé
GB201501258D0 (en) Controller and method
EP3151604A4 (fr) Dispositif et procédé
EP3154443A4 (fr) Dispositif et procédé de réparation tissulaire
GB201514381D0 (en) Kit and Method
EP3211578B8 (fr) Procédé et appareil de vérification
EP3123942A4 (fr) Programme de prédiction de jour d'ovulation et procédé de prédiction de jour d'ovulation
EP3236533A4 (fr) Structure de connexion de module-bloc de jonction et procédé de connexion
EP3240216A4 (fr) Dispositif et procédé
EP3119051A4 (fr) Dispositif de génération de probabilité et procédé associé
EP3160180A4 (fr) Dispositif et procédé
EP3125598A4 (fr) Dispositif et procédé
IL246831B (en) A method for the production of 1-indanols and 1-indanamines
EP3104659A4 (fr) Appareil et procédé
EP3119120A4 (fr) Appareil et procédé
EP3144329A4 (fr) Copolymère réticulé et son procédé de production
HK1220676A1 (zh) 配置件和方法
EP3236604A4 (fr) Dispositif et procédé

Legal Events

Date Code Title Description
STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: THE INTERNATIONAL PUBLICATION HAS BEEN MADE

PUAI Public reference made under article 153(3) epc to a published international application that has entered the european phase

Free format text: ORIGINAL CODE: 0009012

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: REQUEST FOR EXAMINATION WAS MADE

17P Request for examination filed

Effective date: 20170623

AK Designated contracting states

Kind code of ref document: A1

Designated state(s): AL AT BE BG CH CY CZ DE DK EE ES FI FR GB GR HR HU IE IS IT LI LT LU LV MC MK MT NL NO PL PT RO RS SE SI SK SM TR

AX Request for extension of the european patent

Extension state: BA ME

DAV Request for validation of the european patent (deleted)
DAX Request for extension of the european patent (deleted)
A4 Supplementary search report drawn up and despatched

Effective date: 20180727

RIC1 Information provided on ipc code assigned before grant

Ipc: G06F 19/18 20110101ALI20180723BHEP

Ipc: G16H 10/60 20180101AFI20180723BHEP

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: EXAMINATION IS IN PROGRESS

17Q First examination report despatched

Effective date: 20190918

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: EXAMINATION IS IN PROGRESS

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: EXAMINATION IS IN PROGRESS

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: THE APPLICATION IS DEEMED TO BE WITHDRAWN

18D Application deemed to be withdrawn

Effective date: 20230601