EP2281883A4 - Method for determination of dna methylation - Google Patents

Method for determination of dna methylation

Info

Publication number
EP2281883A4
EP2281883A4 EP09728349A EP09728349A EP2281883A4 EP 2281883 A4 EP2281883 A4 EP 2281883A4 EP 09728349 A EP09728349 A EP 09728349A EP 09728349 A EP09728349 A EP 09728349A EP 2281883 A4 EP2281883 A4 EP 2281883A4
Authority
EP
European Patent Office
Prior art keywords
determination
dna methylation
methylation
dna
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP09728349A
Other languages
German (de)
French (fr)
Other versions
EP2281883A1 (en
Inventor
Yoshitaka Tomigahara
Hideo Satoh
Hirokazu Tarui
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Sumitomo Chemical Co Ltd
Original Assignee
Sumitomo Chemical Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Sumitomo Chemical Co Ltd filed Critical Sumitomo Chemical Co Ltd
Publication of EP2281883A1 publication Critical patent/EP2281883A1/en
Publication of EP2281883A4 publication Critical patent/EP2281883A4/en
Withdrawn legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6804—Nucleic acid analysis using immunogens
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/5308—Immunoassay; Biospecific binding assay; Materials therefor for analytes not provided for elsewhere, e.g. nucleic acids, uric acid, worms, mites
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/154—Methylation markers
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y10—TECHNICAL SUBJECTS COVERED BY FORMER USPC
    • Y10T—TECHNICAL SUBJECTS COVERED BY FORMER US CLASSIFICATION
    • Y10T436/00—Chemistry: analytical and immunological testing
    • Y10T436/14—Heterocyclic carbon compound [i.e., O, S, N, Se, Te, as only ring hetero atom]
    • Y10T436/142222—Hetero-O [e.g., ascorbic acid, etc.]
    • Y10T436/143333—Saccharide [e.g., DNA, etc.]
EP09728349A 2008-04-04 2009-04-06 Method for determination of dna methylation Withdrawn EP2281883A4 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
JP2008098006A JP2009247260A (en) 2008-04-04 2008-04-04 Method for determining dna methylation
PCT/JP2009/057411 WO2009123367A1 (en) 2008-04-04 2009-04-06 Method for determination of dna methylation

Publications (2)

Publication Number Publication Date
EP2281883A1 EP2281883A1 (en) 2011-02-09
EP2281883A4 true EP2281883A4 (en) 2011-08-24

Family

ID=41135710

Family Applications (1)

Application Number Title Priority Date Filing Date
EP09728349A Withdrawn EP2281883A4 (en) 2008-04-04 2009-04-06 Method for determination of dna methylation

Country Status (6)

Country Link
US (1) US20110039273A1 (en)
EP (1) EP2281883A4 (en)
JP (1) JP2009247260A (en)
KR (1) KR20100134087A (en)
CN (1) CN102046787A (en)
WO (1) WO2009123367A1 (en)

Families Citing this family (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102329873A (en) * 2011-10-10 2012-01-25 复旦大学 Quantitative sequencing method for genome DNA modifications in full genome range
WO2015025862A1 (en) * 2013-08-21 2015-02-26 富士レビオ株式会社 Method and kit for measuring modified nucleic-acid base using heterogeneous nucleic acid probe
EP3037532A4 (en) * 2013-08-21 2017-05-03 Fujirebio Inc. Method for measuring modified nucleobase using solid phase probe, and kit for same
WO2015025864A1 (en) * 2013-08-21 2015-02-26 富士レビオ株式会社 Method for measuring modified nucleic-acid base using absorbent polynucleotide and kit therefor
CN105992634B (en) 2013-08-30 2019-06-14 华盛顿大学商业中心 Selective modification polymer subunits are to improve the analysis based on nano-pore
JP6497323B2 (en) 2014-01-20 2019-04-10 富士レビオ株式会社 Method for measuring modified nucleobase using guide probe and kit therefor
JP7144037B2 (en) * 2018-07-25 2022-09-29 国立大学法人山口大学 Diagnostic biomarkers for cancer
CN112063717B (en) * 2020-09-17 2022-09-20 山东大学深圳研究院 Application of MDM2 as marker in early diagnosis of hepatitis B virus-related hepatocellular carcinoma and detection kit

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005123942A2 (en) * 2004-06-18 2005-12-29 Novartis Forschungsstiftung, Zweigniederlassung Friedrich Miescher Institute For Biomedical Research Analysis of methylated nucleic acid

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20090298054A1 (en) * 2004-07-18 2009-12-03 Epigenomics Ag Epigenetic methods and nucleic acids for the detection of breast cell proliferative disorders
JPWO2007119518A1 (en) * 2006-03-28 2009-08-27 国立大学法人 東京大学 Anti-methylated DNA antibody and method for producing the same
JP4924014B2 (en) * 2006-09-27 2012-04-25 住友化学株式会社 DNA methylation measurement method

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005123942A2 (en) * 2004-06-18 2005-12-29 Novartis Forschungsstiftung, Zweigniederlassung Friedrich Miescher Institute For Biomedical Research Analysis of methylated nucleic acid

Also Published As

Publication number Publication date
KR20100134087A (en) 2010-12-22
WO2009123367A1 (en) 2009-10-08
EP2281883A1 (en) 2011-02-09
CN102046787A (en) 2011-05-04
US20110039273A1 (en) 2011-02-17
JP2009247260A (en) 2009-10-29

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