EP1766043A4 - Systemes informatiques et procedes pour la construction de classifieurs biologiques et leurs utilisations - Google Patents

Systemes informatiques et procedes pour la construction de classifieurs biologiques et leurs utilisations

Info

Publication number
EP1766043A4
EP1766043A4 EP05766673A EP05766673A EP1766043A4 EP 1766043 A4 EP1766043 A4 EP 1766043A4 EP 05766673 A EP05766673 A EP 05766673A EP 05766673 A EP05766673 A EP 05766673A EP 1766043 A4 EP1766043 A4 EP 1766043A4
Authority
EP
European Patent Office
Prior art keywords
methods
computer systems
classifiers
constructing biological
constructing
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP05766673A
Other languages
German (de)
English (en)
Other versions
EP1766043A2 (fr
Inventor
Choong-Chin Liew
Adam Dempsey
Tom Yager
Samuel Chao
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
StageZero Life Sciences Ltd
Original Assignee
Genenews Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Genenews Ltd filed Critical Genenews Ltd
Publication of EP1766043A2 publication Critical patent/EP1766043A2/fr
Publication of EP1766043A4 publication Critical patent/EP1766043A4/fr
Withdrawn legal-status Critical Current

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G—PHYSICS
    • G06—COMPUTING; CALCULATING OR COUNTING
    • G06F—ELECTRIC DIGITAL DATA PROCESSING
    • G06F18/00—Pattern recognition
    • G06F18/20—Analysing
    • G06F18/21—Design or setup of recognition systems or techniques; Extraction of features in feature space; Blind source separation
    • G06F18/211—Selection of the most significant subset of features
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20—Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/10—Signal processing, e.g. from mass spectrometry [MS] or from PCR
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/20—Supervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding

Landscapes

  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Medical Informatics (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Data Mining & Analysis (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Evolutionary Computation (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Chemical & Material Sciences (AREA)
  • Public Health (AREA)
  • Bioethics (AREA)
  • Genetics & Genomics (AREA)
  • Databases & Information Systems (AREA)
  • Epidemiology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Software Systems (AREA)
  • Signal Processing (AREA)
  • General Engineering & Computer Science (AREA)
  • General Physics & Mathematics (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
EP05766673A 2004-06-19 2005-06-20 Systemes informatiques et procedes pour la construction de classifieurs biologiques et leurs utilisations Withdrawn EP1766043A4 (fr)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US58131204P 2004-06-19 2004-06-19
US58197704P 2004-06-21 2004-06-21
US64347505P 2005-01-12 2005-01-12
US66372205P 2005-03-22 2005-03-22
PCT/US2005/022071 WO2006002240A2 (fr) 2004-06-19 2005-06-20 Systemes informatiques et procedes pour la construction de classifieurs biologiques et leurs utilisations

Publications (2)

Publication Number Publication Date
EP1766043A2 EP1766043A2 (fr) 2007-03-28
EP1766043A4 true EP1766043A4 (fr) 2012-05-30

Family

ID=35782316

Family Applications (1)

Application Number Title Priority Date Filing Date
EP05766673A Withdrawn EP1766043A4 (fr) 2004-06-19 2005-06-20 Systemes informatiques et procedes pour la construction de classifieurs biologiques et leurs utilisations

Country Status (3)

Country Link
EP (1) EP1766043A4 (fr)
CA (1) CA2571180A1 (fr)
WO (1) WO2006002240A2 (fr)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2004263896A1 (en) 2003-08-08 2005-02-17 Genenews Inc. Osteoarthritis biomarkers and uses thereof
US20080085524A1 (en) * 2006-08-15 2008-04-10 Prometheus Laboratories Inc. Methods for diagnosing irritable bowel syndrome
US20100094560A1 (en) * 2006-08-15 2010-04-15 Prometheus Laboratories Inc. Methods for diagnosing irritable bowel syndrome
EP2206063A1 (fr) 2007-10-16 2010-07-14 Koninklijke Philips Electronics N.V. Estimation de marqueurs de diagnostic
US20110111432A1 (en) * 2008-03-12 2011-05-12 Manel Jordana Diagnostic method for peanut allergy
EP2483813A1 (fr) 2009-10-01 2012-08-08 Chipdx LLC Système et procédé de classification de patients
US20200026822A1 (en) * 2018-07-22 2020-01-23 LifeNome Inc. System and method for polygenic phenotypic trait predisposition assessment using a combination of dynamic network analysis and machine learning
CN111223520B (zh) * 2019-11-20 2023-09-12 云南省烟草农业科学研究院 一种预测烟草尼古丁含量的全基因组选择模型及其应用
CN112232387B (zh) * 2020-09-29 2024-02-06 南京财经大学 基于lselm-rfe的粮食作物病害症状的有效特征识别方法
CN113096734B (zh) * 2021-05-11 2021-12-14 中国科学院水生生物研究所 一种筛选用于二倍体群体亲子鉴定的分子标记组合的方法

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030104499A1 (en) * 2001-03-12 2003-06-05 Monogen, Inc. Cell-based detection and differentiation of lung cancer

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7324926B2 (en) * 1999-04-09 2008-01-29 Whitehead Institute For Biomedical Research Methods for predicting chemosensitivity or chemoresistance
CA2505416A1 (fr) * 2002-11-21 2004-06-10 Wyeth Methodes de diagnostic de rcc et autres tumeurs solides

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20030104499A1 (en) * 2001-03-12 2003-06-05 Monogen, Inc. Cell-based detection and differentiation of lung cancer

Also Published As

Publication number Publication date
WO2006002240A8 (fr) 2006-10-26
WO2006002240A3 (fr) 2006-06-15
WO2006002240A2 (fr) 2006-01-05
EP1766043A2 (fr) 2007-03-28
CA2571180A1 (fr) 2006-01-05

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RIC1 Information provided on ipc code assigned before grant

Ipc: G06K 9/62 20060101ALI20120420BHEP

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