EP1501869A2 - Phosphoryliertes histon h2b als apoptosemarker - Google Patents

Phosphoryliertes histon h2b als apoptosemarker

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Publication number
EP1501869A2
EP1501869A2 EP02756877A EP02756877A EP1501869A2 EP 1501869 A2 EP1501869 A2 EP 1501869A2 EP 02756877 A EP02756877 A EP 02756877A EP 02756877 A EP02756877 A EP 02756877A EP 1501869 A2 EP1501869 A2 EP 1501869A2
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EP
European Patent Office
Prior art keywords
antibody
seq
mstl
sapapkkgskk
cells
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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EP02756877A
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English (en)
French (fr)
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EP1501869A4 (de
Inventor
C. David Allis
Wang L. Cheung
Kozo Ajiro
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of Virginia UVA
University of Virginia Patent Foundation
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University of Virginia UVA
University of Virginia Patent Foundation
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Application filed by University of Virginia UVA, University of Virginia Patent Foundation filed Critical University of Virginia UVA
Priority claimed from PCT/US2002/024405 external-priority patent/WO2003014142A2/en
Publication of EP1501869A2 publication Critical patent/EP1501869A2/de
Publication of EP1501869A4 publication Critical patent/EP1501869A4/de
Withdrawn legal-status Critical Current

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/44Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material not provided for elsewhere, e.g. haptens, metals, DNA, RNA, amino acids
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/48Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase
    • C12Q1/485Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase involving kinase
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/80Immunoglobulins specific features remaining in the (producing) cell, i.e. intracellular antibodies or intrabodies
    • C07K2317/82Immunoglobulins specific features remaining in the (producing) cell, i.e. intracellular antibodies or intrabodies functional in the cytoplasm, the inner aspect of the cell membrane, the nucleus or the mitochondria
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2440/00Post-translational modifications [PTMs] in chemical analysis of biological material
    • G01N2440/14Post-translational modifications [PTMs] in chemical analysis of biological material phosphorylation
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2500/00Screening for compounds of potential therapeutic value
    • G01N2500/04Screening involving studying the effect of compounds C directly on molecule A (e.g. C are potential ligands for a receptor A, or potential substrates for an enzyme A)
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2510/00Detection of programmed cell death, i.e. apoptosis

Definitions

  • the present invention is directed to antibodies that bind to histone epitopes created by postranslational modification of the histone protein, compositions comprising such antibodies, and the use of such compositions as diagnostic and screening tools. More particularly, the present invention is directed to a histone modification that is associated with apoptosis.
  • Apoptosis is programmed cell death, a naturally occurring process involved in both the development and aging of cells. It is the process whereby the body can rid itself of unwanted, old, or damaged cells. Apoptosis is the physiological counte ⁇ art of cell proliferation. It is essential for both biological processes such as normal tissue turnover, embryonic development, and maturation of the immune system, including pathological processes, such as hormone deprivation, thermal stress and metabolic stress. (Wyllie, A. H., in Bowen and Lockshin (eds.) Cell Death in Biology and Pathology (Chapman and Hall, 1981), at 9-34). As more is learned of programed cell death it is becoming apparent that there may be several different mechanisms in which programmed cell death occurs.
  • the cell death is characterized by a decrease in cell volume, a condensation of chromatin, cellular budding, and the fragmentation of DNA into a ladder of 180 base pair (bp) oligomers with 3'-OH free ends, a hallmark of apoptosis.
  • Cell membranes maintain their integrity through the process, and lysosomes remain intact. No inflammatory response occurs during the process of apoptosis. Affected cells undergo phagocytosis by adjacent normal cells and by some macrophages. Alternatively, other mechanisms of cell death have recently been described wherein the cell organelles themselves are fragmented. As used herein the term "apoptosis" is intended to cover all forms of programed cell death.
  • the biochemical effector pathways that underlie the apoptotic mechanisms are as yet unknown. It has been suggested that the apoptotic mechanism involves one or more Ca 2+ /Mg 2+ -dependent endogenous endonucleases (Arends et al., (1990) Am. J. Pathol. 136:593-608); transglutaminase activity (Fesus et al., (1987) FEBS Lett. 224:104-108; Taress et al., (1992) J. Biol. Chem. Cell 75:653-660); and the generation of oxygen radicals (Hockenberry et al., (1993) Cell 75:241-251; Butke and Sandstrom (1994) Immun. Today 15:7-10). It appears that gene expression is required for apoptosis as this process can be stopped by inhibitors of RNA or protein synthesis (Martin et al., (1988) J. Cell Biol. 106:829-844).
  • Apoptosis can be activated by a number of intrinsic or extrinsic signals. These signals include the following: mild physical signals, such as ionization radiation, ultraviolet radiation, or hyperthermia; low to medium doses of toxic compounds, such as azides or hydrogen peroxides; chemotherapeutic drugs, such as etoposides and teniposides, cytokines such as tumour necrosis factors and transforming growth factors; and stimulation of T-cell receptors.
  • mild physical signals such as ionization radiation, ultraviolet radiation, or hyperthermia
  • toxic compounds such as azides or hydrogen peroxides
  • chemotherapeutic drugs such as etoposides and teniposides, cytokines such as tumour necrosis factors and transforming growth factors
  • stimulation of T-cell receptors include the following: mild physical signals, such as ionization radiation, ultraviolet radiation, or hyperthermia; low to medium doses of toxic compounds, such as azides or hydrogen peroxides; chemotherapeutic drugs, such as
  • the fundamental unit of eukaryotic chromatin is the nucleosome, a particle containing 146 base pairs of DNA wrapped around a histone core octamer (two copies each of histone H3, H4, H2A, and H2B). How nucleosomal arrays are then packaged into higher-order chromatin fibers that, in turn, define distinct functional domains is poorly understood.
  • Histone post-translational modifications acetylation, phosphorylation, methylation, etc.
  • distinct patterns of covalently- modified histones can act as 'signaling platforms' (i.e. a 'histone code') to recruit and bind nuclear factors that mediate downstream functions by mechanisms that remain unclear.
  • H2A.X phosphorylation of a relatively minor histone variant
  • H2B phosphorylation In mammalian cells, the only major core histone modification that has been uniquely associated with apoptosis is histone H2B phosphorylation, although the responsible sites of phosphorylation in its amino terminus are poorly defined. In keeping, the H2B amino terminal tail, but not other histone tails, is essential for chromatin condensation xrxXenopus cell-free systems that induce chromatin condensation.
  • the present invention is directed to a specific histone (H2B) post- translational modification (serine 14 phosphorylation) that specifically correlates with the onset of apoptotic chromatin condensation and DNA fragmentation in human HL- 60 cells. Furthermore, the present invention describes an antibody that specifically binds to this apoptosis marker (hereafter the "S14P antibody”) and the use of that antibody to diagnose and treat various disease states.
  • H2B histone
  • S14P antibody an antibody that specifically binds to this apoptosis marker
  • apoptosis When apoptosis is unregulated, disease results. Unregulated apoptosis is involved in diseases such as cancer, heart disease, neurodegenerative disorders, autoimmune disorders, and viral and bacterial infections. Cancer, for example, not only triggers cells to proliferate but also blocks apoptosis. Cancer is partly a failure of apoptosis wherein the orders for the cells to kill themselves by apoptosis are blocked. New cancer treatments that involve inducing apoptosis are being researched.
  • the present invention is directed to a marker uniquely associated with programmed cell death.
  • the marker is a post translational modification (phosphorylation of serine 14) of the amino-terminus of histone H2B.
  • the present invention is directed to antibodies that specifically bind to the epitope created by the modification of histone H2B and serve as markers of cells undergoing apoptosis.
  • the present invention is also directed to the kinase, Mstl, responsible for phosphorylating serine 14 of histone H2B and assays for identifying compounds capable of modifying Mstl activity.
  • Fig. 1 sho ws the data from an ELIS A demonstrating that the SI 4P antibody recognizes only the H2B phosphoserine 14 peptides, and this activity can be inhibited by the H2B phosphoserine 14 peptide but not the unmodified peptide.
  • the peptides were coated onto ELIS A plates in the indicated amounts by incubating the peptides in PBS overnight at 4°C. The well was blocked using PBST (PBS containing 0.5%Tween-20) for 1 hour and washed three times with PBST.
  • Anti-phos(S 14) H2B serum was added at 1 :2000 dilution to each well for 2 hours and then followed by more washing.
  • nucleic acid encompasses RNA as well as single and double-stranded DNA and cDNA.
  • nucleic acid encompasses RNA as well as single and double-stranded DNA and cDNA.
  • nucleic acid encompasses RNA as well as single and double-stranded DNA and cDNA.
  • nucleic acid encompasses RNA as well as single and double-stranded DNA and cDNA.
  • nucleic acid DNA
  • RNA and similar terms also include nucleic acid analogs, i.e. analogs having other than a phosphodiester backbone.
  • peptide nucleic acids which are known in the art and have peptide bonds instead of phosphodiester bonds in the backbone, are considered within the scope of the present invention.
  • peptide encompasses a sequence of 3 or more amino acids wherein the amino acids are naturally occurring or synthetic (non-naturally occurring) amino acids.
  • Peptide mimetics include peptides having one or more of the following modifications:
  • peptides wherein one or more of the peptidyl ⁇ C(O)NR ⁇ linkages (bonds) have been replaced by a non-peptidyl linkage such as a ⁇ CH2_carbamate linkage ( ⁇ CH 2 OC(O)NR-), aphosphonate linkage, a -CH2_sulfonamide (-CH 2 -S(O) 2 NR-) linkage, a urea ( ⁇ NHC(O)NH ⁇ ) linkage, a — CH2 -secondary amine linkage, or with an alkylated peptidyl linkage (-C(O)NR-) wherein R is C 1.C4 alkyl;
  • a non-peptidyl linkage such as a ⁇ CH2_carbamate linkage ( ⁇ CH 2 OC(O)NR-), aphosphonate linkage, a -CH2_sulfonamide (-CH 2 -S(O) 2 NR-) linkage, a urea (
  • R and R ⁇ are hydrogen or C .C4 alkyl with the proviso that
  • R and R1 are not both hydrogen; 3. peptides wherein the C terminus is derivatized to —C(O)R2 where R 2 is selected from the group consisting of Cj .C4 alkoxy, and --NR3R4 where R3 and R4 are independently selected from the group consisting of hydrogen and C1..C4 alkyl.
  • Naturally occurring amino acid residues in peptides are abbreviated as recommended by the TUPAC-TUB Biochemical Nomenclature Commission as follows: Phenylalanine is Phe or F; Leucine is Leu or L; Isoleucine is lie or I;
  • Methionine is Met or M; Norleucine is Nle; Naline is Nat or N; Serine is Ser or S;
  • Proline is Pro or P; Threonine is Thr or T; Alanine is Ala or A; Tyrosine is Tyr or Y; Histidine is His or H; Glutamine is Gin or Q; Asparagine is Asn or N; Lysine is Lys or K; Aspartic Acid is Asp or D; Glutamic Acid is Glu or E; Cysteine is Cys or C; Tryptophan is T ⁇ or W; Arginine is Arg or R; Glycine is Gly or G, and X is any amino acid.
  • Other naturally occurring amino acids include, by way of example, 4-hydroxyproline, 5-hydroxylysine, and the like.
  • conservative amino acid substitution is defined herein as exchanges within one of the following five groups: I. Small aliphatic, nonpolar or slightly polar residues: Ala, Ser, Thr, Pro, Gly; II. Polar, negatively charged residues and their amides:
  • purified and like terms relate to the isolation of a molecule or compound in a form that is substantially free (i.e. at least 60% free, preferably 80% free, and most preferably greater than 90% free) from other components with which they are naturally associated.
  • operably linked refers to a juxtaposition wherein the components are configured so as to perform their usual function.
  • control sequences or promoters operably linked to a coding sequence are capable of effecting the expression of the coding sequence.
  • solid support relates to a solvent insoluble substrate that is capable of forming linkages (preferably covalent bonds) with soluble molecules.
  • the support can be either biological in nature, such as, without limitation, a cell or bacteriophage particle, or synthetic, such as, without limitation, an acrylamide derivative, glass, plastic, agarose, cellulose, nylon, silica, or magnetized particles.
  • the support can be in particulate form or a monolythic strip or sheet.
  • the surface of such supports may be solid or porous and of any convenient shape.
  • the terms “complementary” or “complementarity” are used in reference to polynucleotides (i.e., a sequence of nucleotides) related by the base-pairing rules. For example, for the sequence “A-G-T,” is complementary to the sequence “T-C-A.”
  • “Therapeutic agent,” “pharmaceutical agent” or “drug” refers to any therapeutic or prophylactic agent which may be used in the treatment (including the prevention, diagnosis, alleviation, or cure) of a malady, affliction, disease or injury in a patient.
  • the term “treating” includes alleviating the symptoms associated with a specific disorder or condition and/or preventing or eliminating said symptoms.
  • treating cancer includes preventing or slowing the growth and/or division of cancer cells as well as killing cancer cells.
  • the term "pharmaceutically acceptable carrier” encompasses any of the standard pharmaceutical carriers, such as a phosphate buffered saline solution, water and emulsions such as an oil/water or water/oil emulsion, and various types of wetting agents.
  • antigenic fragment of H2B serine 14 encompasses both natural peptide fragments of the amino terminus of histone H2B (including the peptide fragments SAPAPKKGSKK (SEQ ID NO: 1) and
  • SAPAPKKGSKK (SEQ ID NO: 2)) and synthetic equivalents of those fragments.
  • antibody refers to a polyclonal or monoclonal antibody or a binding fragment thereof such as Fab, F(ab')2 and Fv fragments.
  • S in bold face type
  • Ser when used in the context of an amino acid sequence, will represent a serine amino acid that has been phosphorylated.
  • Ser(P) of "S(P)” as used herein, also refer to the phosphorylated form of the amino acid serine.
  • S14P antibody is an antibody that binds specifically to the sequence CSAPAPKKGSKK (SEQ ID NO: 3); and the term “S 14 antibody” is an antibody that binds specifically to the sequence CSAPAPKKGSKK
  • biologically active fragments of the S14P antibody encompasses natural or synthetic portions of the respective full-length antibody that are capable of specific binding to the peptide CSAPAPKKGSKK (SEQ ID NO: 3).
  • a "linker” is a molecule (or group of molecules) that serves to chemically link two disparate entities. For example a peptide linker chemically links two polypeptides via a peptide bond.
  • parenteral includes administration subcutaneously, intravenously or intramuscularly.
  • the present invention is directed to the discovery that modification of the amino terminus of the histone H2B protein, and homologous proteins from other species, can serve as a marker of apoptosis. More particularly, applicants have discovered that the amino terminus of histone H2B protrudes from the surface of the chromatin and the serine amino acid at the 14th position from the amino terminus (Serl4) is selectively phosphorylated in vivo in cells that will undergo or have already begun the process of apoptosis. Therefore, in accordance with one aspect of the present invention phosphorylation of Serl4 of histone H2B serves as a marker of apoptosis in vertebrate species, and antibodies recognizing this portion of the protein have use as important diagnostic tools.
  • One aspect of the present invention is directed to antigens used to produce antibodies specific to the amino terminus of the phosphorylated histone H2B protein (Phos H2B).
  • Phos H2B phosphorylated histone H2B protein
  • a purified antigenic fragment of the amino terminus of Phos H2B or a synthetic equivalent thereof is provided.
  • the antigen comprises an amino acid fragment comprising the sequence CSAPAPKKGSKK (SEQ ID NO: 3), wherein C is an artificial cysteine residue added to the native H2B sequence.
  • the antigen consists of the sequence SAPAPKKGSKK (SEQ ID NO: 1) or an amino acid sequences that differ from SAPAPKKGSKK (SEQ ID NO: 1) by one or more conservative amino acid substitutions.
  • the present invention also encompasses an antigen that comprises the non-phosporylated H2B sequence: SAPAPKKGSKK (SEQ ID NO: 2).
  • the purified antigen comprises a polypeptide linked to a suitable carrier, such as bovine serum albumin or Keyhole limpet hemocyanin.
  • a suitable carrier such as bovine serum albumin or Keyhole limpet hemocyanin.
  • the present invention is also directed to nucleic acid sequences that encode for the peptide sequence SAPAPKKGSKK (SEQ ID NO: 2).
  • a Phos H2B antibody that binds specifically to the sequence CSAPAPKKGSKK (SEQ ID NO: 3; the "S14P antibody”), and an Unmodified H2B antibody is provided that binds specifically to the sequence CSAPAPKKGSKK (SEQ ID NO: 2; the "S14 antibody”).
  • One method used to generate the S14P antibody or the S 14 antibody involves administration of the respective antigen to a laboratory animal, typically a rabbit, to trigger production of antibodies specific for the antigen.
  • the dose and regiment of antigen administration to trigger antibody production as well as the methods for purification of the antibody are well known to those skilled in the art.
  • such antibodies can be raised by administering the antigen of interest subcutaneously to New Zealand white rabbits which have first been bled to obtain pre- immune serum.
  • the antigens can be injected at a total volume of 100 ul per site at six different sites.
  • Each injected material will contain synthetic surfactant adjuvant pluronic polyols, or pulverized acrylamide gel containing the protein or polypeptide after SDS-polyacrylamide gel electrophoresis.
  • the rabbits are then bled two weeks after the first injection and periodically boosted with the same antigen three times every six weeks. A sample of serum is then collected 10 days after each boost. Polyclonal antibodies are then recovered from the serum by affinity chromatography using the corresponding antigen to capture the antibody. Ultimately, the rabbits are euthenized with pentobarbital 150 mg/Kg IN. This and other procedures for raising polyclonal antibodies are disclosed in E. Harlow, et. al., editors, Antibodies: A Laboratory Manual (1988), which is hereby inco ⁇ orated by reference. The specificity of antibodies may be determined by enzyme-linked immunosorbent assay or immunoblotting, or similar methods known to those skilled in the art.
  • the present invention also encompasses monoclonal antibodies that specifically bind to either the H2B S14P antigen (i.e. a fragment of the amino terminus of histone H2B containing the phosphorylated serine 14 amino acid) or the unmodified H2B S14 antigen (i.e. a fragment of the amino terminus of histone H2B containing the unphosphorylated serine 14 amino acid).
  • Monoclonal antibody production may be effected using techniques well-known to those skilled in the art. Basically, the process involves first obtaining immune cells (lymphocytes) from the spleen of a mammal (e.g., mouse) which has been previously immunized with the antigen of interest either in vivo or in vitro.
  • the antibody-secreting lymphocytes are then fused with myeloma cells or transformed cells, which are capable of replicating indefinitely in cell culture, thereby producing an immortal, immunoglobulin-secreting cell line.
  • the resulting fused cells, or hybridomas are cultured, and the resulting colonies screened for the production of the desired monoclonal antibodies. Colonies producing such antibodies are cloned, and grown either in vivo or in vitro to produce large quantities of antibody.
  • One embodiment of the invention is directed to a hybridoma cell line which produces monoclonal antibodies which bind the H2B S14P or the H2B S14 antigens.
  • a description of the theoretical basis and practical methodology of fusing such cells is set forth in Kohler and Milstein, Nature, 256:495 (1975), which is hereby inco ⁇ orated by reference.
  • fragments of antibodies can retain binding specificity for a particular antigen.
  • Antibody fragments can be generated by several methods, including, but not limited to proteolysis or synthesis using recombinant DNA technology.
  • An example of such an embodiment is selective proteolysis of the H2B S14P or the H2B S14 antibody by papain to generate Fab fragments, or by pepsin to generate a F(ab')2 fragment.
  • These antibody fragments can be made by conventional procedures, as described in J. Goding, Monoclonal Antibodies: Principles and Practice, pp. 98-118 (N.Y. Academic Press 1983), which is hereby inco ⁇ orated by reference.
  • Other fragments of the H2B S14P or the H2B S14 antibodies which retain the specific binding of the whole antibody can be generated by other means known to those skilled in the art.
  • the antibodies are labeled. It is not intended that the present invention be limited to any particular detection system or label.
  • the antibody may be labeled with a fluorophore, a radioisotope, or a non-isotopic labeling reagent such as biotin or digoxigenin; antibodies containing biotin may be detected using "detection reagents" such as avidin conjugated to any desirable label such as a fluorochrome.
  • the histone specific antibodies of the present invention are indirectly labeled through the use of a secondary antibody, wherein the secondary antibody is labeled and is specific for the primary (histone specific) antibody.
  • the histone specific antibody may be directly labeled with a radioisotope or fluorochrome such as FITC or rhodamine; in such cases secondary detection reagents may not be required for the detection of the labeled probe.
  • the presence of the modified histones in the blood can then be detected through the use of the relevant labeled antibody.
  • the antibodies or fragments of the present invention can be combined with a carrier or diluent to form a composition.
  • the carrier is a pharmaceutically acceptable carrier.
  • carrier refers to a diluent, adjuvant, excipient or vehicle with which an active agent is administered.
  • Such carriers and diluents include sterile liquids such as phosphate buffered saline solution, water, oils and emulsions such as an oil/water or water/oil emulsion, and various types of wetting agents including those agents approved by a regulatory agency of the US Federal government or listed in the US Pharmacopeia for use in animals, including humans.
  • the compositions may further include the addition of a surfactant and other pharmaceutically and physiologically acceptable carrier, including adjuvants, excipients or stabilizers.
  • Illustrative oils are those of petroleum, animal, vegetable, or synthetic origin, for example, peanut oil, soybean oil, or mineral oil.
  • liquid carriers In general, water, saline, aqueous dextrose, and related sugar solution, and glycols such as, propylene glycol or polyethylene glycol, are preferred liquid carriers, particularly for injectable solutions.
  • Histone H2B phosphorylation in mammalian apoptotic cells An association with D ⁇ A fragmentation, J Biol Chem. 2000 Jan 7;275(l):439-43).
  • H2B Serl4 phosphorylation with respect to apoptosis appears to apply only to vertebrate species since Serl4 and surrounding sequences are well conserved from frogs to humans, but are not observed in flies or worms.
  • This chromatin modification has been demonstrated in human, mouse and Xenopus cells but staining with ⁇ -Phos (Ser 14) H2B (the S14P antibody) was not seen in invertebrates such as C. elegans.
  • Ser32 in H2B also appears to be a 'vertebrate addition', and some evidence has suggested that this may also be a site of apoptotic H2B phosphorylation, at least in HL-60 cells.
  • Ser36 in the H2B amino terminus a site which is conserved from yeast to humans and is present in flies and worms. Whether Ser36 in H2B, or the equivalent residue in invertebrates, is phosphorylated during their apoptotic programs is not known. However, the fact that yeast appear to contain this site make it likely that phosphorylation here, if it occurs at all, has other biological functions outside of apoptosis.
  • histone H2B serine 14 phosphorylation occurs immediately before DNA laddering suggesting that histone H2B phosphorylation might be involved in or act as a 'trigger ' for DNA fragmentation during apoptosis.
  • Several nucleases that cleave internucleosomal DNA during apoptosis have been identified.
  • histone HI and HMG enhance nuclease function, and thus, phosphorylated H2B could lead to chromatin structural alterations that enhance accessibility of key DNase activities to chromatin or facilitate their recruitment to the chromatin.
  • compositions comprising the S14P antibody, or a bioactive fragment thereof, and a carrier or diluent can be used in conjunction with a method to detect cells that are destine to enter into apoptosis or cells that already are in apoptosis.
  • the antibodies of the present invention can be used to detect cells that fail to be induced into the apoptosis process and thus serve as a marker for identifying precancer/cancerous cells and tissues.
  • cells are cultured in the presence of an apoptosis inducing agent (such as the etoposide, NP-16) and the cells then fixed and stained to determine if a substantial population of cells fail to enter apoptosis relative to a control population of cells.
  • an apoptosis inducing agent such as the etoposide, NP-16
  • Such a method can be used to analyze cells recovered in a biopsy to diagnose malignancies and determine the aggressiveness of a tumor and thus the selection of treatment strategies.
  • a method for detecting the presence of apoptotic cells or cells about to become apoptotic in a vertebrate species, including humans comprises the steps of first isolating a biological sample from the vertebrate species, wherein the biological sample comprises the species' chromatin.
  • the biological sample comprises tissues or cells isolated from the individual vertebrate species.
  • the chromatin i.e. genomic DNA associated with histones
  • individual histones are purified from the biological sample prior to contacting the purified chromatin/histones with the S14P antibody.
  • cells isolated from the vertebrate species can be fixed and directly stained with the antibody.
  • chromatin or histones isolated from the individual are contacted with the S14P antibody under conditions suitable for specific binding of the antibody to its target. Non-specific bound S14P is subsequently removed and the immunocomplexes formed between the chromatin and the S14P antibody are identified and quantitated as an indicator of the presence of apoptotic cells in the vertebrate species.
  • the S14P antibody is labeled, or alternatively a labeled secondary antibody (specific for the S14P antibody or histone H2B) is used, to identify and quantitate the formation of the immunocomplexes.
  • the amount of immunocomplexes formed is directly proportional to the amount of phosphorylated S14 histone H2B that is present in the sample and is thus indicative of apoptotic activity in the individual that served as a source of the biological sample.
  • the detection of an abnormal level of apoptotic activity serves as a diagnostic of various disease states, including cancer.
  • the method of identifying/quantitating the formation of the immunocomplexes comprises the steps of fixing or binding cells, or the purified chromatin, to a solid support and probing with labeled S14P antibody, wherein non-specifically bound antibody is removed by washing with buffered solutions.
  • the formation of the immunocomplexes can be identified by immunoprecipitation.
  • the S14P antibody is immobilized on a solid support and the immobilized antibody is contacted with the isolated chromatin/histones.
  • the formation of immunocomplexes is then identified by washing the bound antibody with a buffered solution and contacting the bound antibody with a second labeled antibody that specifically binds to histone H2B at a site separate and distinct from the S14P epitope.
  • Mstl mammalian Ste20-like kinase 1
  • Mstl is a ubiquitously expressed serine/threonine kinase whose cellular function is unknown.
  • Mstl is a member of the sterile 20-like superfamily of which -30 related kinases exist in humans.
  • This kinase is typically regarded as an upstream regulator of MAPK pathways with roles in apoptosis, mo ⁇ hogenesis and cytoskeletal rearrangements.
  • the kinase is know to be cleaved by activated effector caspase 3, releasing a C- terminal regulatory region, and the activated N-terminal catalytic domain. This activated domain then induces apoptosis in a pathway where physiological substrates were previously unknown.
  • one substrate for Mstl is the 14th serine residue of histone 2B.
  • chromatin changes such as condensation and DNA fragmentation have been viewed as the last committed step of apoptosis.
  • caspase inhibitors has not been effective to decrease cell death after the initial stress (such as ischemia) has occurred.
  • effector caspases initiate the death pathway leading to defined chromatin changes, caspases are no longer needed.
  • effective prevention of cell death may be best brought about by combining caspase inhibitors with drugs that target downstream activities such as Mstl that affect chromatin changes during apoptosis.
  • a method is provided for inhibiting cell death by treating cells with caspases inhibitors and an inhibitor of Mstl .
  • a method for detecting the kinase activity of a sample, and more particularly Mstl activity.
  • the method comprises contacting a peptide comprising the sequence CSAPAPKKGSKK (SEQ ID NO: 2) for a predetermined length of time with a sample that is suspected of having kinase activity.
  • the amount of S14P antibody that binds to the substrate is a direct correlation of the extent the substrate was phosphorylated during the predetermined time length and thus indicates the kinase activity of the sample.
  • This assay can also be used to screen for potential modulators of Mstl activity, including inhibitors and stimulants of Mstl activity.
  • a method of screening for inhibitors of MstT activity comprises the steps of providing a sample, wherein the sample comprises a kinase (i.e. Mstl) and a substrate that is methylated by that kinase (for example the peptide CSAPAPKKGSKK; SEQ ID NO: 2 will be used as the substrate for Mstl activity), adding a potential inhibitor of the kinase to the sample, and incubating the sample for a predeterminied length of time under conditions that are typically (i.e. in the absence of an inhibitor compound) favorable/permissive for kinase activity.
  • a kinase i.e. Mstl
  • a substrate that is methylated by that kinase for example the peptide CSAPAPKKGSKK; SEQ ID NO: 2 will be used as the substrate for Mstl activity
  • the sample is incubated for a time that allows for at least half of the substrate to be modified, assuming maximal kinase activity.
  • the substrate is recovered and contacted with an antibody that binds specifically to the phosphorylated substrate, but not the non-phosphorylated substrate.
  • the antibody specifically binds to the peptide CSAPAPKKGSKK (SEQ ID NO: 3). Quantifying the amount of S14P antibody that is bound to the substrate peptide is a direct correlation of the level activity of the kinase in the sample.
  • a method for screening a library of compounds to isolate modifiers of Mstl activity comprises the steps of first providing an Mstl substrate that has been equally portioned into separate reaction chambers (typically separate wells of a microtiter dish).
  • the Mstl substrate is a protein/peptide comprising the sequence SAPAPKKGSKK (SEQ ID NO: 2) and in one embodiment the peptide is covalently bound to the surface of the microtiter dish either directly or indirectly through a linker.
  • the Mstl substrate is then contacted with the Mstl enzyme, and members of the compound library to form a kinase reaction mixture.
  • a single candidate modulating compound is add to each well, however in an alternative embodiment 2 or more compound library members are added to each individual reaction chamber.
  • the kinase reaction mixture comprising the Mstl substrate, Mstl and the candidate modulating compound is incubated under conditions typically permissive for Mstl kinase activity (i.e. in the absence of a Mstl inhibitor). After an appropriate length of time sufficient to allow for phosphorylation of the Mstl substrate the reaction is stopped and the substrate is recovered.
  • the extent that the substrate is phosphorylated is directly related to the modulating effect of the added library compound on the activity of the Mstl enzyme.
  • Mstl modulating compounds can be used as therapeutics to treat diseases associated with inappropriate apoptotic activity, including cancer.
  • Measuring the phosphorylation of the Mstl substrate can be accomplished using a polypeptide comprising the amino acid sequence SAPAPKKGSKK (SEQ ID NO: 2) as the substrate and the S14P antibody.
  • the substrate is linked to the surface of the reaction vessel directly or indirectly (i.e. through a linking moiety) via covalent, ionic, hydrogen or other chemical bond.
  • the substrate is bound to the surface of the reaction chamber by adding the Mstl substrate to the reaction chamber and incubating in PBS overnight at 4°C.
  • the peptides are covalently linked to the surface of the reaction chamber using standard reactive groups and reactions known to those skilled in the art. After incubating the substrate in the presence of the Mstl enzyme and the potential inhibitor, the reaction mixture is removed from the reaction chamber and the chamber is optionally washed with buffer. The S14P antibody is then added to the reaction chambers under conditions that allow for specific binding to its substrate and then the reaction chambers are washed with buffer to remove non-specifically bound material. In accordance with one embodiment specific binding of the antibody to the peptides is detected through an ELISA reaction. In an alternative embodiment the substrate is not bound to the reaction chamber, and the specific binding of the antibody to the peptides is detected by immunoprecipatation.
  • the antibodies of the present invention have a number of potential uses including their use as markers of apoptosis.
  • Apoptosis has known to occur in cancer, neurodegenerative diseases, stoke etc.
  • the marker can also be used to assess and monitor the progress of a therapeutic treatment.
  • the S14P antibody can also be used as a marker of the changes in chromatin that occurs during apoptosis.
  • the antibodies can also be used to study the signals that are responsible for the histone modification (H2B ser 14 phosphorylation) and how this modification is involved in apoptosis.
  • a kit is provided for detecting apoptotic cells.
  • the kit comprises an antibody that specifically binds to a phosphorylated serine modified peptide comprising the sequence SAPAPKKGSKK (SEQ ID NO: 1).
  • the kit further comprises an antibody that specifically binds to the non-phosphorylated amino terminus of the histone H2B peptide comprising the sequence SAPAPKKGSKK (SEQ ID NO: 2).
  • the antibodies are attached to an insoluble support, wherein the support is either a monolithic solid or is in particular form.
  • the antibodies are monoclonal antibodies and in a further embodiment the antibodies are labeled.
  • the antibodies of the present invention can be packaged in a variety of containers, e.g., vials, tubes, microtiter well plates, bottles, and the like. Other reagents can be included in separate containers and provided with the kit; e.g., positive control samples, negative control samples, buffers, cell culture media, etc.
  • kits further comprise peptides that serve as substrates for kinase activity. More particularly, the peptides comprise the sequence SAPAPKKGSKK (SEQ ID NO: 2). In one preferred embodiment the peptide substrate is covalently bound either directly or through a linking moiety to a solid substrate.
  • the kits of the present invention may further comprise reagents for detecting the antibody once it is bound to the target antigen.
  • reagents for treating cells or tissue to render nuclear proteins accessible for immunological binding may also be included, as may immunofluorescent detection reagents (an anti-immunoglobulin antibody, or anti- histone H2B antibody, derivatized with fluorescein or rhodamine, or a biotinylated anti-immunoglobulin antibody together with avidin or streptavidin derivatized with fluorescein or rhodamine), immunohistochemical or immunocytochemical detection reagents (an anti-immunoglobulin antibody, or anti-histone H2B antibody, derivatized with alkaline phosphatase or horseradish peroxidase, or a biotinylated anti-immunoglobulin antibody together with avidin or streptavidin derivatized with alkaline phosphatase or horseradish peroxidase).
  • immunofluorescent detection reagents an anti-immunoglobulin antibody, or anti
  • the kit includes one or more reagents for immunoperoxidase staining (an anti-immunoglobulin antibody derivatized with horseradish peroxidase, or a biotinylated anti-immunoglobulin antibody together with avidin or streptavidin derivatized with horseradish peroxidase), together with a chromogenic substrate therefor (e.g., diaminobenzidine) .
  • a chromogenic substrate therefor e.g., diaminobenzidine
  • HL-60 cells were cultured in RPMI with 10%FBS whereas 293T, HeLa, HepG2, and IMR90 were grown in DMEM with 10%FBS.
  • Etoposide, anisomycin, and anti-Fas were purchased from Sigma.
  • drugs were used in these concentration 20ug/mL for etoposide, 25ng/mL anisomycin and 15ng/mL anti- Fas.
  • 40-100 J/m 2 was used (Biorad GS Gene Linker UN chamber). After induction of apoptosis the growth media was changed and harvested at various times afterward. Control cells were either treated with DMSO or mock-treated.
  • cells were subjected to any of the following: resuspension in SDS-lysis buffer (Laemmli's sample buffer), nuclear extraction, acid extraction for histones, or genomic DNA extraction.
  • Nuclei were isolated by lysis in detergent and low speed spin as described in Strahl et al., (2001) Curr Biol 11, 996-1000. These nuclei can either be salt extracted for nuclear proteins (see below) or acid extracted in 0.4 N H 2 SO 4 . After incubating on ice for 2-4 hours, high speed centrifugation is done to remove the insoluble pellet. 5.4 % of Percholic acid was added to the supernatant and the precipitated histones were resuspended in water.
  • Genomic DNA was harvested by lysing the cell pellet in lOmM Tris pH 9.0, lmM EDTA, lOmM NaCl, 1% w/v SDS, lmg/mL of proteinase K at 50°C for 4-5 hours. To remove proteins, a phenol/chloroform extraction was performed and then the DNA was precipitated in 0.3M sodium acetate and 70% Ethanol. After centrifugation, the pellet was resuspended in TE and the RNA was digested by adding lmg/mL Rnase A for 1 hour at room temp. DNA was separated in 1.2% agarose TAE gel.
  • Nuclei from HL-60 were extracted in 20mM Hepes pH 7.8, 0.42M NaCl, 1.5mM MgCl 2 , 0.2mM EDTA, 0.5mM PMSF, 0.5mM DTT, 25% (v/v) glycerol for 3-4 hours on ice. After centiftigation at 14K for 20 minutes, soluble fraction was isolated and used for in vitro kinase assay, in-gel kinase assay, and Western blotting (see below). SDS-PAGE was done as described by Laemmli. For in-gel assay, 10- 12% SDS-PAGE gel was polymerized with 0.1 mg/mL chicken core histones or 0.1 mg/mL purified chicken H2B.
  • In-gel was done as essentially described in (Sassone- Corsi et al., (1999) Science 285, 886-891. Briefly, nuclear extracts or fractions were run into these gels. Then to rid the SDS, the gel was washed repeatedly (three times) in 30mM Tris HC1 pH 7.4, lmM DTT, O.lmM EDTA, 20% (v/v) isopropanol for 20 minutes each time. To denature the proteins, the gel was incubated in 8M urea, 30mM Tris HC1 pH 7.4, lmM DTT, O.lmM EDTA for one hour.
  • the gel was then immersed in 30mM Tris HC1 pH 7.4, 5mM MgCl 2 , 2mM MnCl 2 , lmM DTT, lOOmM NaCl, 0.05%) Tween 40 at 4°C overnight to renature the proteins.
  • an in vitro kinase reaction was performed using 50mCi of g- ATP in 30mM Tris HC1 pH 7.4, 5mM MgCl 2 , 2mM MnCl 2 , lmM DTT at 30°C for 2 hours.
  • the gel is then stained with Coomassie Blue, destained, and dried down for autoradiography.
  • Nuclear extract fractionation, in vitro kinase assay and Western blotting Nuclear extracts were fractionated in a superose 6 PC 3.2/300 column
  • the eluent consists of 200mM NaCl, 50mM NaPO 4 pH7.0, 5mM MgCl 2 , 20% v/v glycerol.
  • the flow rate was 40 mL/min at 4°C.
  • the apoptotic fraction containing the caspase cleaved Mstl comes off at molecular weight of approximately 66 kDa whereas, the full length Mstl comes off at around 150 kDa. 10 mL of fractions were used for in vitro kinase reaction and Western blotting.
  • Transfection was done according to the lipofectamine plus kit (Gibco Invitrogen). After 24-48 hours of transfection, 293T cells were harvested in 40mM Hepes pH 7.5, 1% Triton X-100, 0.05% ⁇ P-40, 150 mM NaCl, 50mM NaF, lmM EDTA, lmM EGTA, 10% v/v glycerol, lmM phenylmethylsulfonyl fluoride,
  • IP immunoprecipitation
  • the beads were incubated in lmg of H2B, 40mM Hepes 7.5, 20mM MgCl 2 , O.lmg/mL microcystin, lOmM ATP, lmCi g-P32 ATP for 30 minutes at 30°C.
  • the reaction was separated on 15% SDS-PAGE gel and dried for autoradiography.
  • H2B serine 14 phospho-specific antibody S14P antibody
  • HL-60 human leukemia cell line
  • NP-16 etoposide
  • H2B phosphorylation signal is strongly enhanced at around 4 hours post NP-16 treatment.
  • soluble D ⁇ A was extracted from parallel samples at identical time points.
  • H2B S14 phosphorylation is determined by Western blots using ⁇ -Phos (S14) H2B.
  • H2B (Serl4) phosphorylation is increased during program cell death during developmental sculpturing events
  • H2B Ser 14
  • H2B phosphorylation is also associated with apoptosis in a more physiological model
  • this modification was examined in an animal where programmed cell death is well known and well characterized. Inspection of the primary amino acid sequence of histone H2B amino termini reveals that serine 14 is conserved among vertebrate species, including Xenopus. During metamo ⁇ hosis, reso ⁇ tion occurs in Xenopus laevis tails and clusters of these cells die by developmentally programmed apoptosis. Degenerating tails from stage 64 froglets were examined by immunofluorescence using the S14P antibody.
  • Nuclear extracts from apoptotic cells contain a 34 kDa H2B Serl4 kinase
  • H2B Serl4 phosphorylation
  • HL-60 cells were chosen as a starting point for these studies, since Serl4 phosphorylation of H2B is strongly increased in VP-16-treated HL-60 cells.
  • Nuclear extracts from mock-and VP-16-treated HL-60 cells were used for preliminary kinase assays and Western blots. Firstly it was determined that 'apoptotic' nuclear extracts contain a H2B Serl4 kinase activity that is greatly increased in stimulated cells.
  • a histone H2B-based, in-gel kinase assay was used to search for, and ideally, determine the molecular weight(s) of potential apoptotic H2B kinases in crude apoptotic extracts.
  • H2B or mixtures of core histones as substrate, a prominent apoptotic-induced histone kinase was detected. While numerous bands appear in common between the H2B-containing and the 'no substrate' gels (likely due to autophosphorylation), one band is consistently detected in the H2B-containing gel that has an apparent molecular weight of approximately 34 kDa.
  • Mstl (Mammalian Sterile Twenty) is a caspase-activated Ser/Thr protein kinase of approximately 34 kDa whose activity plays causal role in inducing apoptosis under some biological settings. However, the physiological targets of this kinase, relative to programmed cell death, was previously unknown.
  • nuclear extracts prepared from NP- 16-stimulated HL-60 cells were first probed with an amino terminal antibody to Mstl ( ⁇ - ⁇ -Mstl; this antibody detects the ⁇ -terminal catalytic domain of Mstl, (Graves et al, (1998) EMBO 17, 2224-2234)) to determine if the caspase-cleaved form of Mstl is present in fractions containing 34H2BapoK as detected by the in-gel H2B kinase assay.
  • Western blot analyses show that the cleaved form of Mstl is present in these nuclear extracts, and its molecular weight is similar, if not identical, to the apoptotic-induced H2B kinase.
  • the apoptotic nuclear extract was fractionated using a size exclusion column (Superose 6) to partially purify the kinase.
  • a size exclusion column Superose 6
  • Mstl can phosphorylate histone H2B at serine 14 in vitro and in vivo
  • CMV driven plasmids containing either myc-tagged full length (FL), kinase dead (KD), or a C -terminal truncated form (DC) of Mstl were transfected into 293T cells.
  • Mstl can directly phosphorylate histone H2B at Serl4.
  • Mstl can induce apoptotic-like chromatin condensation when overexpressed in HeLa cells.
  • full length and kinase dead versions of Mstl were transfected into HeLa cells, and western blots of cell extracts were then probed with the S14P antibody.
  • An increase in H2B Serl4 phosphorylation was only detected in cells harboring the Mstl full length construct (WT). Considerably less signal is detected with the kinase dead mutant.
  • ⁇ -PARP poly (ADP-ribose) polymerase which gets cleaved as cells undergo apoptosis and isolated genomic DNA was evaluated for the appearance of characteristic DNA laddering.
  • cleavage of PARP and the appearance of DNA ladder occur immediately after both H2B phosphorylation and cleavage of Mstl (approximately 2.5 hr post induction). While timing differences may reflect differences in detection sensitivity between these apoptotic markers, the data suggest that H2B phosphorylation precedes DNA laddering and hence, may play a role in establishing apoptotic DNA fragmentation by mechanisms that remain unclear. More importantly, the onset of caspase-cleaved Mstl is closely linked to the appearance of H2B Serl4 phosphorylation during the time course of apoptotic induction.
  • H2A.X phosphorylation has also been associated with double-strand DNA breaks. Since NP16 (etoposide) also causes D ⁇ A breaks, the kinetics of H2A.X phosphorylation were also evaluated.
  • H2A.X phosphorylation occurs within one hour of NP16 treatment which suggests that D ⁇ A breaks, induced by NP16, occur early during the apoptotic pathway. Since H2B (Serl4) phosphorylation occurs later than H2A.X phosphorylation, but before (or concurrently with) other well known apoptotic markers, these data suggest that H2B phosphorylation is not simply associated with D ⁇ A breaks. Rather, H2B phosphorylation appears to be a unique chromatin marker for apoptosis in HL-60 cells.
  • H2B Serl4 phosphorylation and cleavage of Mstl are caspase 3 dependent Since caspases are involved in many integral parts of the apoptotic programs, we sought to determine to what extent, if any, H2B Serl4 phosphorylation is controlled by activated, effector caspases.
  • Mstl cleavage is dependent on caspase 3 and the ⁇ -terminal cleavage form of Mstl, missing nuclear export signals ( ⁇ ES; cleaved off by activated Caspase 3), is then translocated into the nucleus. The truncated Mstl then travels into the nucleus and induces chromatin condensation and apoptosis.
  • H2B (Ser 14) phosphorylation is dependent on the cleavage of Mstl, this histone modification should be sensitive to documented caspase 3 inhibitors such as the DEND peptide.
  • HL-60 cells were pre-incubated with varying amounts of z-DEVD-fmk (Trevigen) before subsequent treatment with NP 16 for 4 hours. Cell extracts were then harvested for western analysis. Western blots using Mstl ⁇ -terminal and H2B S14 phos antibodies showed that incubation with 200mM of z-DEVD-fmk inhibited both Mstl cleavage and H2B Serl4 phosphorylation.
  • H2B is a previously unrecognized nuclear substrate for this activity, and hint at the possibility that phosphorylation of H2B at Ser 14 is part of an apototic 'histone code', at least in vertebrates.
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Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB2241782A (en) * 1990-03-08 1991-09-11 Morinaga & Co Serodiagnosis method and the kit used therefor
WO1992011029A1 (en) * 1990-12-17 1992-07-09 The Johns Hopkins University Suppression of immune responses with oligomeric forms of antigen of controlled chemistry
US5637465A (en) * 1993-06-03 1997-06-10 Boehringer Mannheim Gmbh Method for the detection of a programmed or induced cell death of eukaryotic cells

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB2241782A (en) * 1990-03-08 1991-09-11 Morinaga & Co Serodiagnosis method and the kit used therefor
WO1992011029A1 (en) * 1990-12-17 1992-07-09 The Johns Hopkins University Suppression of immune responses with oligomeric forms of antigen of controlled chemistry
US5637465A (en) * 1993-06-03 1997-06-10 Boehringer Mannheim Gmbh Method for the detection of a programmed or induced cell death of eukaryotic cells

Non-Patent Citations (5)

* Cited by examiner, † Cited by third party
Title
AJIRO KOZO: "Histone H2B phosphorylation in mammalian apoptotic cells: An association with DNA fragmentation" JOURNAL OF BIOLOGICAL CHEMISTRY, vol. 275, no. 1, 7 January 2000 (2000-01-07), pages 439-443, XP002353258 ISSN: 0021-9258 *
CHEUNG P; ALLIS C D; SASSONE-CORSI P: "Signaling to chromatin through histone modifications." CELL, vol. 103, no. 2, 13 October 2000 (2000-10-13), pages 263-271, US *
CHEUNG WANG L ET AL: "Apoptotic phosphorylation of histone H2B is mediated by mammalian sterile twenty kinase." CELL, vol. 113, no. 4, 16 May 2003 (2003-05-16), pages 507-517, XP002353259 ISSN: 0092-8674 *
GRAVES J D ET AL: "Both phosphorylation and caspase-mediated cleavage contribute to regulation of the Ste20-like protein kinase Mst1 during CD95/Fas-induced apoptosis." THE JOURNAL OF BIOLOGICAL CHEMISTRY. 4 MAY 2001, vol. 276, no. 18, 4 May 2001 (2001-05-04), pages 14909-14915, ISSN: 0021-9258 *
See also references of WO03014142A2 *

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