EP0932680A2 - Compositions and methods for the prevention and diagnosis of human granulocytic ehrlichiosis - Google Patents

Compositions and methods for the prevention and diagnosis of human granulocytic ehrlichiosis

Info

Publication number
EP0932680A2
EP0932680A2 EP97909914A EP97909914A EP0932680A2 EP 0932680 A2 EP0932680 A2 EP 0932680A2 EP 97909914 A EP97909914 A EP 97909914A EP 97909914 A EP97909914 A EP 97909914A EP 0932680 A2 EP0932680 A2 EP 0932680A2
Authority
EP
European Patent Office
Prior art keywords
aohge
polypeptide
polypeptides
kda
antibodies
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
EP97909914A
Other languages
German (de)
French (fr)
Inventor
Erol Fikrig
Stephen W. Barthold
Jacob Ijdo
Wei Sun
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Yale University
Original Assignee
Yale University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Yale University filed Critical Yale University
Publication of EP0932680A2 publication Critical patent/EP0932680A2/en
Withdrawn legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • C07K14/29Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria from Richettsiales (O)
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04Antibacterial agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

Definitions

  • This invention relates to compositions and methods useful for studying the pathogenicity of and for the prevention, treatment and diagnosis of human granulocytic ehrlichiosis (HGE) .
  • HGE human granulocytic ehrlichiosis
  • this invention relates to polypeptides and DNA sequences which encode them, from the agent of HGE, referred to herein as "aoHGE".
  • aoHGE agent of HGE
  • Such polypeptides and DNA sequences are useful to detect the presence of aoHGE in humans, to diagnose human granulocytic ehrlichiosis and related disorders caused by aoHGE infection, and to elicit an immune response which is effective to prevent or lessen the severity, for some period of time, of aoHGE infection.
  • This invention also relates to vaccines comprising aoHGE, one or more of the aoHGE polypeptides or antibodies of this invention. Also within the scope of this invention are diagnostic kits comprising the aoHGE polypeptides, DNA sequences encoding them or antibodies of this invention.
  • This invention also relates to methods for selecting protective aoHGE polypeptides and antibodies. Methods for using the aforementioned polypeptides, DNA sequences and antibodies are also within the scope of this invention.
  • the causative agent of human granulocytic ehrlichiosis is a recently identified bacteria of the genus Ehrlichia which has not yet been named. It is sometimes referred to as E. microti or as "the agent of HGE" [S.R. Telford et al., "Perpetuation of the Agent of Human Granulocytic Ehrlichiosis In a Deer Tick- Rodent Cycle," Proc . Na tl . Acad. Sci . USA, 93, pp. 6209-6214 (1996)].
  • the Ehrlichia which causes human granulocytic ehrlichiosis will be referred to herein as "aoHGE.”
  • the tick vector has been shown to be Ixodes scapulari s (also referred to as Ixodes dammini ) in the Ixodes ri cinus complex [S. et al . , Proc . Na tl . Acad. Sci . USA, 93, supra ] .
  • Ticks acquire aoHGE by feeding on an infected host. Humans are infected by the bite of infected ticks. Not unexpectedly, the disease is prevalent in regions of the country where Lyme disease and babesiosis, diseases also associated with I. scapularis, are common [L.A.
  • human granulocytic ehrlichiosis is becoming a recognized human health problem in endemic areas and the incidence of the disease is expected to rise over the next several years.
  • Human granulocytic ehrlichiosis is transmitted by ticks that carry a number of different pathogens including Babesia mi croti , the agent of babesiosis, and Borrelia burgdorferi , the agent of Lyme disease.
  • a greater understanding of human granulocytic ehrlichiosis may provide insight into clinical symptoms that result in misdiagnosis of other tick-borne infections, most notably Lyme disease.
  • the present invention solves the problems referred to above by providing means to study, diagnose, prevent and treat aoHGE infection and human granulocytic ehrlichiosis and related disorders caused by aoHGE infection. More particularly, this invention provides aoHGE polypeptides, DNA sequences that encode the polypeptides, antibodies directed against the polypeptides and compositions and methods comprising the aoHGE polypeptides, DNA sequences and antibodies. This invention further provides a single or multicomponent vaccine comprising aoHGE or one or more aoHGE polypeptides or antibodies of this invention.
  • This invention provides DNA sequences that code for the aoHGE polypeptides of this invention, recombinant DNA molecules that are characterized by those DNA sequences, unicellular hosts transformed with those DNA seq ent s and molecules, and methods of using those sequences, molecules and hosts to produce the aoHGE polypeptides and multicomponent vaccines of this invention.
  • DNA sequences of this invention are also advantageously used in methods and means for the diagnosis of aoHGE infection and human granulocytic ehrlichiosis .
  • diagnostic means and methods characterized by aoHGE polypeptides, DNA sequences encoding them or antibodies directed against these polypeptides. These means and methods are useful for the detection of human granulocytic ehrlichiosis and aoHGE infection. They are also useful in following the course of treatment against such infection. In patients previously inoculated with the vaccines of this invention, the detection means and methods disclosed herein are also useful for determining if booster inoculations are appropriate.
  • This invention further provides an immunocompetent, non-human, mammalian model for human granulocytic ehrlichiosis for use in studying the pathology of the disease and in screening for aoHGE polypeptides and antibodies that are capable of protecting a treated subject against aoHGE infection or human granulocytic ehrlichiosis and related disorders caused by aoHGE infection.
  • this invention also provides methods for the identification and isolation of additional aoHGE polypeptides, as well as compositions and methods comprising such polypeptides.
  • Figure 1A-D depicts the DNA and amino acid sequences of the E6 polypeptide of aoHGE isolate NCH-1 (SEQ ID NOS: 1 and 2) .
  • Figure 2A-D depicts the DNA and amino acid sequences of the E7 polypeptide of aoHGE isolate NCH-1 (SEQ ID NOS: 3 and 4) .
  • Figure 3 depicts the amino acid sequence of the 44-1 polypeptide from the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 5) .
  • Figure 4 depicts the amino acid sequence of the 44-2 polypeptide from the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 6) .
  • Figure 5A-B depicts the DNA sequence of the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 10) .
  • Figure 6 depicts the amino acid sequence of the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: ) , and indicates the position of the 44-1 and 44-2 polypeptides.
  • Figure 7 depicts the amino acid sequence of the 80-1 polypeptide from the 80 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 7) .
  • x indicates the amino acid positions in which a characteristic chromatogram was not obtained.
  • Figure 8 shows the ELISA and IFA antibody titers in sera from aoHGE infected mice to aoHGE-HL-60 antigen at 10, 17 and 24 days after tick-borne infection. Titers are expressed as the last positive 2-fold reciprocal dilution of serum, 4 mice/interval.
  • Figure 9 shows immunoblot results of serum samples from 18 aoHGE patients. Titers 1:80 and above were considered positive. ND: not done, a: acute serum, c: convalescent serum. For patient 18, there were two convalescent sera, one at 3 weeks and one at 6 weeks after tick bite.
  • Figure 10 depicts the 5' and 3' primers used to amplify the e ⁇ gene (SEQ ID NOS: 8 and 9) .
  • the underlined portion of the 3' primer indicates the inserted Xhol site.
  • the underlined portion of the 5' primer indicates the inserted EcoRI site.
  • Figure 11A-C depicts the DNA sequence of the eM4 polypeptide of aoHGE isolate NCH-1 (SEQ ID NO: 12) .
  • Figure 12A-B depicts the amino acid sequence of the eM4 polypeptide of aoHGE isolate NCH-1 (SEQ ID NO: 12).
  • Figure 13A-B depicts the DNA sequence designated E5-3A (SEQ ID NO: ), which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
  • Figure 14A-B depicts the DNA sequence designated E5-3B (SEQ ID NO: ), which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
  • Figure 15A-B depicts the DNA sequence designated E5-5A (SEQ ID NO: ), which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
  • Figure 16 depicts the DNA sequence designated E5-5B (SEQ ID NO: ) , which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
  • Figure 17A-C depicts the DNA sequence designated E5-6 (SEQ ID NO: ) , which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
  • Figure 18 is a matrix plot depicting a region of homology between approximately nucleotides 200-400 and 600-1000 the E5-3B DNA sequence and approximately nucleotides 400-600 and 900-1200, respectively, of the 44-kDa DNA sequence.
  • Figure 19 is a matrix plot depicting a region of homology between approximately nucleotides 300-650 of the E5-5B DNA sequence and approximately nucleotides 900-1200 of the 44-kDa DNA sequence.
  • Figure 20 is a matrix plot depicting a region of homology between approximately nucleotides 1000-1400 and 1700-1900 of the E5-5B DNA sequence and approximately nucleotides 400-600 and 900-1300 of the 44-kDa DNA sequence.
  • This invention relates to aoHGE polypeptides and DNA sequences encoding them, antibodies directed against those polypeptides, compositions comprising the polypeptides, DNA sequences or antibodies, and methods for identifying additional aoHGE polypeptides and antibodies and methods for the detection, treatment and prevention of human granulocytic ehrlichiosis and related disorders ⁇ aused by aoHGE infection.
  • this invention provides a 40-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
  • this invention provides a 44-kDa aoHGE polypeptide and fragments 44-1 and 44-2 thereof, ind compositions and methods comprising the polypeptide and fragments.
  • this invention provides a 65-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide. In another embodiment, this invention provides a 80-kDa aoHGE polypeptide and the 80-1 fragment thereof, and compositions and methods comprising the polypeptide and fragment. In another embodiment, this invention provides a 94-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
  • this invention provides a 105-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
  • this invention provides a 110-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
  • this invention provides a 115-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
  • this invention provides a 125-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide. In another embodiment, this invention provides an E6 polypeptide and compositions and methods comprising the polypeptide.
  • this invention provides an E7 polypeptide encoded and compositions and methods comprising the polypeptide.
  • this invention provides an eM4 polypeptide encoded and compositions and methods comprising the polypeptide.
  • this invention provides an E5-3A, E5-3B, E5-5A, E5-5B and E5-6 DNA ssequences, and compositions and methods comprising them.
  • the preferred compositions and methods of each of the aforementioned embodiments are characterized by immunogenic aoHGE polypeptides.
  • an "immunogenic aoHGE polypeptide" is any aoHGE polypeptide that, when administered to an animal, is capable of eliciting a corresponding antibody.
  • immunogenic aoHGE polypeptides are intended to include additional aoHGE polypeptides which may be identified according to the methods disclosed herein.
  • compositions and methods of each of the aforementioned embodiments are characterized by aoHGE polypeptides which elicit in treated animals, the formation of an immune response which is effective to prevent or lessen the severity, for some period of time, of aoHGE infection.
  • this invention provides a vaccine comprising aoHGE, one or more aoHGE polypeptides of this invention or one or more antibodies directed against aoHGE or a polypeptide of this invention.
  • aoHGE polypeptides provided by this invention are substantially free of an Ehrli chia bacterium or fragments thereof, and thus may be used in a variety of applications without the risk of unintentional infection or contamination with undesired Ehrlichia components. Accordingly, the aoHGE polypeptides of this invention are particularly advantageous in compositions and methods for the diagnosis and prevention of aoHGE infection.
  • a polypeptide that is "substantially free of an Ehrli chia bacterium or fragments thereof" is a polypeptide that, when introduced into an animal susceptible to aoHGE infection, fails to produce any Ehrlichia bacteria detectable by microscopic examination of a blood or tissue smear, by PCR amplification using aoHGE specific primers, by m si tu hybridization with aoHGE specific probes or by any other method for detecting aoHGE infection.
  • it is a polypeptide that is detectable as a single band on an immunoblot probed with polyclonal anti-aoHGE anti-serum.
  • this invention provides immunodominant aoHGE polypeptides.
  • an "immunodominant aoHGE polypeptide” denotes an aoHGE polypeptide, or derivative thereof, that is recognized by antibodies elicited by infection with aoHGE, but which is substantially less reactive with antibodies elicited by infection with other bacteria.
  • an "immunodominant region" of an aoHGE polypeptide denotes a region of an aoHGE polypeptide, or derivatives thereof, that is recognized by antibodies elicited by aoHGE infection but that is substantially less reactive than the full-length aoHGE protein when reacted with antibodies elicited by infection with other bacteria.
  • substantially less reactive means, that when reacted in an ELISA or on an immunoblot with patient serum which contains antibodies elicited by infection with bacteria other than aoHGE, the level of reactivity would be at least 10-fold lower than the level of reactivity with serum from patients infected with aoHGE .
  • the immunodominant polypeptides would be bound at a level at least 50-fold lower than the level of binding that occurs with antibodies in sera from patients infected with aoHGE. Most preferably, there would be no detectable binding.
  • this invention provides antibodies directed against the aoHGE polypeptides of this invention, and pharmaceutically effective compositions and methods comprising those antibodies.
  • the antibodies of this embodiment are those that are reactive with the aoHGE polypeptides of this invention, and are effective to diagnose, treat or protect against aoHGE infection and human granulocytic ehrlichiosis.
  • Such antibodies may be used in a variety of applications, including to detect the presence of aoHGE, to screen for expression of novel aoHGE polypeptides, to purify novel aoHGE polypeptides, to block or bind to the aoHGE polypeptides, to direct molecules to the surface of aoHGE or aoHGE infected cells and to prevent or lessen the severity, for some period of time, of aoHGE infection.
  • this invention relates to diagnostic means and methods characterized by the aoHGE polypeptides, DNA sequences or antibodies of the invention.
  • This invention further provides an immunocompetent nonhuman, mammalian model for human HGE.
  • the laborato__, mouse model, described herein, is characterized by clinical features that closely mimic HGE in humans.
  • the mouse model is useful for selecting the preferred aoHGE polypeptides and antibodies of this invention that are effective to protect against aoHGE infection and human granulocytic ehrlichiosis .
  • a further embodiment of this invention is a novel diagnostic assay for detecting the presence of aoHGE in a biological sample.
  • the assay provided herein tests the ability of the biological sample to produce aoHGE infection in infant laboratory mice.
  • the infant mice are 5 days old or less.
  • the mice are 3 days old or less.
  • the mice are 1 day of age.
  • an "aoHGE polypeptide” is a polypeptide encoded by a DNA sequence of aoHGE.
  • aoHGE polypeptides include the 40, 44, 65, 80, 94, 110, 115, or 125-kDa polypeptide expressed by aoHGE, as described in Example I, infra, an E6, E7 or eM4 polypeptide or fragments or derivatives thereof.
  • an "aoHGE polypeptide” includes polypeptides encoded by a DNA sequence of any organism that causes HGE.
  • a "40-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrlichia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 40-kDa aoHGE polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and the 40-kDa aoHGE polypeptide of (a) or
  • aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 40-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • a "44-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a polypeptide of (a) -(f);
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a polypeptide of (a) -(f);
  • a "65-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • a derivative of a 65-kDa aoHGE polypeptide of (a) or (b) said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ;
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 65-kDa aoHGE polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and the 65-kDa aoHGE polypeptide of (a) or
  • aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 65-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • an "80-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • a "94-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chi a bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 94-kDa aoHGE polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides than are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 94-kDa aoHGE polypeptide of (a) or (b) or (c) ; and (f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 94-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • a "105-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive witn a 105-kDa aoHGE polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 105-kDa aoHGE polypeptide of (a) or
  • aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 105-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • a "110-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 110-kDa aoHGE polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 110-kDa aoHGE polypeptide of (a) or
  • aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 110-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • a "115-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of
  • Ehrli chia bacterium or fragments thereof which is selected from the group consisting of: (a) a 115-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof;
  • a derivative of a 115-kDa aoHGE polypeptide of (a) or (b) said derivative being at least 80% identical in ammo acid sequence to the corresponding polypeptide of (a) or (b) ;
  • aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 115-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • a "125-kDa aoHGE polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 125-kDa aoHGE polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 125-kDa aoHGE polypeptide of (a) or
  • aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 125-kDa aoHGE polypeptide of (a) or (b) or (c) .
  • an "E6 polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • a derivative of an E6 polypeptide of (a) or (b) said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b);
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with an E6 polypeptide of (a) or (b) or (c) ;
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and an E6 polypeptide of (a) or (b) or (c) ;
  • an "E7 polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptide ⁇ that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with an E7 polypeptide of (a) - (c);
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and an E7 polypeptide of (a) -(c); and (g) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with an E7 polypeptide of (a) -(c).
  • an "eM4 polypeptide” denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
  • aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a polypeptide of (a) or (b) or (c);
  • aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a polypeptide of (a) or (b) or (c) ; and (f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a polypeptide of (a) or (b) or (c) .
  • a "serotypic variant" of an aoHGE polypeptide of this invention also referred to herein as a “variant” is any naturally occurring aoHGE polypeptide which may be encoded, in whole or in part, by a DNA sequence which hybridizes, at 20-27°C below Tm, to any portion of the DNA sequence encoding the aoHGE polypeptide disclosed herein.
  • aoHGE polypeptides include those polypeptides encoded by DNA sequences of which any portion may be amplified by using the polymerase chain reaction and oligonucleotide primers derived from any portion of the DNA sequence encoding the aoHGE polypeptide.
  • a "protective aoHGE polypeptide” is any aoHGE polypeptide that, when administered to an animal, is capable of eliciting an immune response that is effective to prevent or lessen the severity, for some period of time, of aoHGE infection or HGE.
  • Preventing or lessening the severity of infection may be evidenced by a change in the physiological manifestations of aoHGE infection, including fever, myalgia, arthralgia, anemia, leukocytopenia, thrombocytopenia, neutropenia, elevated hepatic enzyme levels, gastro-intestinal or pulmonary hemorrhaging and other disorders caused by aoHGE infection.
  • aoHGE infection including fever, myalgia, arthralgia, anemia, leukocytopenia, thrombocytopenia, neutropenia, elevated hepatic enzyme levels, gastro-intestinal or pulmonary hemorrhaging and other disorders caused by aoHGE infection.
  • it may be evidenced by a decrease in the level of aoHGE in infected ticks which have fed on treated animals.
  • probes and oligonucleotide primers derived from the DNA encoding an aoHGE ⁇ polypeptide may be used to isolate and clone further variants of aoHGE proteins from other aoHGE isolates and perhaps from other rickettsia as well, which are useful in the methods and compositions of this invention.
  • a "derivative" an aoHGE polypeptide is a polypeptide in which one or more physical, chemical, or biological properties has been altered.
  • Such modifications include, but are not limited to: amino acid substitutions, modifications, additions or deletions; alterations in the pattern of lipidation, glycosylation or phosphorylation; reactions of free amino, carboxyl, or hydroxyl side groups of the amino acid residues present in the polypeptide with other organic and non-organic molecules; and other modifications, any of which may result in changes in primary, secondary or tertiary structure.
  • a "protective epitope” is (1) an epitope which is recognized by a protective antibody, and/or (2) an epitope which, when used to immunize an animal, elicits an immune response sufficient to prevent or lessen the severity for some period of time, of aoHGE infection or HGE.
  • preventing or lessening the severity of infection may be evidenced by a change in the physiological manifestations of aoHGE infection including fever, myalgia, arthralgia, anemia, leukocytopenia, thrombocytopenia, neutropenia, elevated hepatic enzyme levels, gastro-intestinal or pulmonary hemorrhaging, and other related disorders.
  • a protective epitope may comprise a T cell epitope, a B cell epitope, or combinations thereof.
  • a "protective antibody” is an antibody that confers protection, for some period of time, against aoHGE infection or any one of the physiological disorders associated with aoHGE infection or HGE.
  • T cell epitope is an epitope which, when presented to T cells by antigen presenting cells, results in a T cell response such as clonal expansion or expression of lymphokines or other irrvrtiunostimulatory molecules.
  • a T cell epitope may also be an epitope recognized by cytotoxic T cells that may affect intracellular aoHGE infection.
  • a strong T cell epitope is a T cell epitope which elicits a strong T cell response.
  • B cell epitope is the simplest spatial conformation of an antigen which reacts with a specific antibody.
  • a "therapeutically effective amount" of a polypeptide or of an antibody is the amount that, when administered to an animal, elicits an. immune response that is effective to prevent or lessen the severity, for some period of time, of aoHGE infection.
  • an “an anti-aoHGE polypeptide antibody, " also referred to as “an antibody of this invention, " is an antibody directed against an aoHGE polypeptide of this invention.
  • an antibody of this invention may be directed against a 40-kDa, 44-kDa, 65-kDa, 80-kDa, 94-KDa, 110-kDa, 115- kDa, 125-kDa polypeptide expressed by aoHGE, as described in Example I, infra, an E6, E7 or eM4 polypeptide, or a fragment, derivative or serotypic variant of the aforementioned polypeptides.
  • An anti- aoHGE polypeptide antibody of this invention includes antibodies directed against polypeptides expressed by aoHGE, or fragments or derivatives thereof, that are immunologically cross-reactive with any one of the aforementioned polypeptides.
  • an anti-aoHGE polypeptide antibody of this invention includes antibodies directed against other aoHGE polypeptides identified according to methods taught herein.
  • an "anti-aoHGE polypeptide antibody” is an immunoglobulin molecule, or portion thereof, that is immunologically reactive with an aoHGE polypeptide of the present invention and that was either elicited by immunization with aoHGE or an aoHGE polypeptide of this invention or was isolated or identified by its reactivity with an aoHGE polypeptide of this invention.
  • An anti-aoHGE polypeptide antibody may be an intact immunoglobulin molecule or a portion of an immunoglobulin molecule that contains an intact antigen binding site, including those portions known in the art as F(v), Fab, Fab' and F(ab')2. It should be understood that an anti-aoHGE polypeptide antibody may also be a protective antibody.
  • the aoHGE polypeptides disclosed herein are immunologically reactive with antisera generated by infection of a mammalian host with aoHGE . Accordingly, they are useful in methods and compositions to diagnose human granulocytic ehrlichiosis, and in therapautic compositions to stimulate immunological clearance of aoHGE during ongoing infection. In addition, because at least some, if not all of the aoHGE polypeptides disclosed herein are protective surface proteins of aoHGE, they are particularly useful in single and multicomponent vaccines against human granulocytic ehrlichiosis.
  • multicomponent vaccines are preferred because such vaccines may be formulated to more closely resemble the immunogens presented by replication- competent aoHGE, and because such vaccines are more likely to confer broad-spectrum protection than a vaccine comprising only a single aoHGE polypeptide.
  • Multicomponent vaccines according to this invention may also contain polypeptides which characterize other vaccines useful for immunization against diseases other than human granulocytic ehrlichiosis such as, for example, Lyme disease, human monocytic ehrlichiosis, babesiosis, diphtheria, polio, hepatitis, and measles. Such multicomponent vaccines are typically incorporated into a single composition.
  • compositions and methods of this invention comprise aoHGE polypeptides having enhanced immunogenicity.
  • Such polypeptides may result when the native forms of the polypeptides or fragments thereof are modified or subjected to treatments to enhance their immunogenic character in the intended recipient.
  • aoHGE polypeptides of this invention may be modified by coupling to dinitrophenol groups or arsanilic acid, or by denaturation with heat and/or SDS.
  • the polypeptides are small, chemically synthesized polypeptides, it may be desirable to couple them to an immunogenic carrier.
  • the coupling must not interfere with the ability of either the polypeptide or the carrier to function appropriately.
  • Useful immunogenic carriers are well known in the art.
  • examples of such carriers are keyhole limpet hemocyanm (KLH) ; albumins such as bovme serum albumin (BSA) and ovalbumm, PPD (purified protein derivative of tuberculin) ; red blood cells; tetanus toxoid; cholera toxoid; agarose beads; activated carbon; or bentonite.
  • KLH keyhole limpet hemocyanm
  • BSA bovme serum albumin
  • PPD purified protein derivative of tuberculin
  • red blood cells tetanus toxoid
  • cholera toxoid agarose beads
  • activated carbon or bentonite.
  • Modification of the ammo acid sequence of the aoHGE polypeptides disclosed herein in order to alter the lipidation state is also a method which may be used to increase their lmmunogenicity or alter their biochemical properties.
  • the polypeptides may also be prepared with the objective of increasing stability or rendering the molecules more amenable to purification and preparation.
  • One such technique is to express the polypeptides as fusion proteins comprising other aoHGE or non-aoHGE sequences.
  • derivatives of the aoHGE polypeptides may be prepared by a variety of methods, including by m vi tro manipulation of the DNA encoding the native polypeptides and subsequent expression of the modified DNA, by chemical synthesis of derivatized DNA sequences, or by chemical or biological manipulation of expressed amino acid sequences.
  • derivatives may be produced by substitution of one or more amino acids with a different natural amino acid, an amino acid derivative or non-native amino acid.
  • conservative substitution is preferred, e.g., 3-methylhistidine may be substituted for histidine, 4-hydroxyproline may be substituted for proline, 5-hydroxylysine may be substituted for lysine, and the like.
  • Causing amino acid substitutions which are less conservative may also result in desired derivatives, e.g., by causing changes in charge, conformation and other biological properties.
  • substitutions would include for example, substitution of a hydrophilic residue for a hydrophobic residue, substitution of a cysteine or proline for another residue, substitution of a residue having a small side chain for a residue having a bulky side chain or substitution of a residue having a net positive charge for a residue having a net negative charge.
  • the derivatives may be readily assayed according to the methods disclosed herein to determine the presence or absence of the desired characteristics.
  • the immunogenicity, immunodominance and/or protectiveness of a derivative of this invention can be readily determined using methods disclosed in the Examples.
  • the aoHGE polypeptides disclosed herein are prepared as part of a larger fusion protein.
  • an aoHGE polypeptide of this invention may be fused at its N- terminus or C-terminus to a different immunogenic aoHGE polypeptide, to a non-aoHGE polypeptide or to combinations thereof, to produce fusion proteins comprising the aoHGE polypeptide.
  • fusion proteins comprising aoHGE polypeptides are constructed comprising B cell and/or T cell epitopes from multiple serotypic variants of aoHGE, each variant differing from another with respect to the locations or sequences of the epitopes within the polypeptide.
  • fusion proteins are constructed which comprise one or more of the aoHGE polypeptides fused to other aoHGE polypeptides. Such fusion proteins are particularly effective in the prevention, treatment and diagnosis of human granulocytic ehrlichiosis as caused by a wide spectrum of aoHGE isolates.
  • the aoHGE polypeptides are fused to moieties, such as immunoglobulin domains, which may increase the stability and prolong the in vivo plasma half-life of the polypeptide.
  • moieties such as immunoglobulin domains
  • Such fusions may be prepared without undue experimentation according to methods well known to those of skill in the art, for example, in accordance with the teachings of United States patent 4,946,778, or United States patent 5,116,964.
  • the exact site of the fusion is not critical as long as the polypeptide retains the desired biological activity. Such determinations may be made according to the teachings herein or by other methods known to those of skill in the art.
  • the fusion proteins comprising the aoHGE polypeptides be produced at the DNA level, e.g., by constructing a nucleic acid molecule encoding the fusion protein, transforming host cells with the molecule, inducing the cells to express the fusion protein, and recovering the fusion protein from the cell culture.
  • the fusion proteins may be produced after gene expression according to known methods.
  • the aoHGE polypeptides may also be part of larger multimeric molecules which may be produced recombinantly or may be synthesized chemically. Such multimers may also include the polypeptides fused or coupled to moieties other than amino acids, including lipids and carbohydrates.
  • the multimeric proteins will consist of multipxe T or B cell epitopes or combinations thereof repeated within the same molecule, either randomly, or with spacers (amino acid or otherwise) between them.
  • aoHGE is incorporated into a vaccine. As disclosed in
  • Examples and , animals immunized with such a vaccine produce antibodies that confer protection against aoHGE infection.
  • an aoHGE polypeptide of this invention which is also a protective aoHGE polypeptide is incorporated into a single component vaccine.
  • aoHGE polypeptides of this invention which are also protective aoHGE polypeptides are incorporated into a multicomponent vaccine comprising other protective aoHGE polypeptides.
  • a multicomponent vaccine may also contain protective polypeptides useful for immunization against other diseases such as, for example, Lyme disease, human monocytic ehrlichiosis, babesiosis, diphtheria, polio, hepatitis, and measles.
  • Such a vaccine by virtue of its ability to elicit antibodies to a variety of protective aoHGE polypeptides, will be effective to protect against human granulocytic ehrlichiosis as caused by a broad spectrum of different aoHGE isolates, even those that may not express one or more of the aoHGE proteins.
  • the multicomponent vaccine may contain the aoHGE polypeptides as part of a multimeric molecule m which the various components are covalently associated. Alternatively, it may contain multiple individual components.
  • a multicomponent vaccine may be prepared comprising two or more of the aoHGE polypeptides, wherein each polypeptide is expressed and purified from independent cell cultures and the polypeptides are combined prior to or during formulation.
  • a multicomponent vaccine may be prepared from heterodimers or tetramers wherein the polypeptides have been fused to immunoglobulin chains or portions thereof.
  • a vaccine could comprise, for example, a 44-kDa aoHGE polypeptide fused to an immunoglobulin heavy chain and an E6 aoHGE polypeptide fused to an immunoglobulin light chain, and could be produced by transforming a host cell with DNA encoding the heavy chain fusion and DNA encoding the light chain fusion.
  • the host cell selected should be capable of assembling the two chains appropriately.
  • the heavy and light chain fusions could be produced from separate cell lines and allowed to associate after purification.
  • the multicomponent vaccine will comprise numerous T cell and B cell epitopes of protective aoHGE polypeptides.
  • aoHGE polypeptides of this invention may be administered to an animal via a liposome delivery system in order to enhance their stability and/or immunogenicity .
  • Delivery of the aoHGE polypeptides via liposomes may be particularly advantageous because the liposome may be internalized by phagocytic cells in the treated animal. Such cells, upon ingesting the liposome, would digest the liposomal membrane and subsequently present the polypeptides to the immune system in conjunction with other molecules required to elicit a strong immune response.
  • the liposome system may be any variety of unilamellar vesicles, multilamellar vesicles, or stable plurilamellar vesicles, and may be prepared and administered according to methods well known to those of skill in the art, for example in accordance with the teachings of United States patents 5,169,637, 4,762,915, 5,000,958 or 5,185,154.
  • any of the aoHGE polypeptides of this invention may be used in the form of a pharmaceutically acceptable salt.
  • Suitable acids and bases which are capable of forming salts with the polypeptides of the present invention are well known to those of skill in the art, and include inorganic and organic acids and bases .
  • this invention we describe a method which comprises the steps of treating an animal with a therapeutically effective amount of an aoHGE polypeptide, or a fusion protein or a multimeric protein comprising an aoHGE polypeptide, in a manner sufficient to prevent or lessen the severity, for some period of time, of aoHGE infection.
  • the polypeptides that are preferred for use in such methods are those that contain protective epitopes.
  • Such protective epitopes may be B cell epitopes, T cell epitopes, or combinations thereof.
  • a method which comprises the steps of treating an animal with a multicomponent vaccine comprising a therapeutically effective amount of an aoHGE polypeptide, or a fusion protein or multimeric protein comprising such polypeptide in a manner sufficient to prevent or lessen the severity, for some period of time, of aoHGE infection.
  • the polypeptides, fusion proteins and multimeric proteins that are preferred for use in such methods are those that contain protective epitopes, which may be B cell epitopes, T cell epitopes, or combinations thereof.
  • polypeptides, fusion proteins and multimeric proteins for use in these compositions and methods are those containing both strong T cell and B cell epitopes. Without being bound by theory, we believe that this is the best way to stimulate high titer antibodies that are effective to neutralize aoHGE infection.
  • Such preferred polypeptides will be internalized by B cells expressing surface immunoglobulin that recognizes the B cell epitope (s). The B cells will then process the antigen and present it to T cells. The T cells will recognize the T cell epitope (s) and respond by proliferating and producing lymphokines which in turn cause B cells to differentiate into antibody producing plasma cells.
  • a closed autocatalytic circuit exists which will result in the amplification of both B and T cell responses, leading ultimately to production of a strong immune response which includes high titer antibodies against the aoHGE polypeptide.
  • T H 1 T-helper cells type 1
  • T H 2 T-helper cells type 2
  • T H 1 or T H 2 cells may also be favored by the mode of administration of the polypeptide.
  • aoHGE polypeptides may be administered in certain doses or with particular adjuvants and immunomodulators, for example with interferon-gamma or interleuken-12 (T H 1 response) or interleukin-4 or interleuken-10 (T H 2 response) .
  • overlapping fragments of the aoHGE polypeptides of this invention are constructed as described herein.
  • the polypeptides that contain B cell epitopes may be identified in a variety of ways for example by their ability to (1) remove protective antibodies from polyclonal antiserum directed against the polypeptide or (2) elicit an immune response which is effective to prevent or lessen the severity of aoHGE infection.
  • polypeptides may be used to produce monoclonal antibodies which are screened for their ability to confer protection against aoHGE infection when used to immunize naive animals. Once a given monoclonal antibody is found to confer protection, the particular epitope that is recognized by that antibody may then be identified.
  • the polypeptides that contain T cell epitopes may be identified in vi tro by testing them for their ability to stimulate proliferation and/or cytokine production by T cell clones generated from humans of various HLA types, from the lymph nodes, spleens, or peripheral blood lymphocytes of C3H or other laboratory mice, or from domestic animals.
  • Compositions comprising multiple T cell epitopes recognized by individuals with different Class II antigens are useful for prevention and treatment of human granulocytic ehrlichiosis in a broad spectrum of patients .
  • an aoHGE polypeptide containing a B cell epitope is fused to one or more other immunogenic aoHGE polypeptides containing strong T cell epitopes.
  • the fusion protein that carries both strong T cell and B cell epitopes is able to participate in elicitation of a high titer antibody response effective to neutralize infection with aoHGE.
  • Strong T cell epitopes may also be provided by non-aoHGE molecules. For example, strong T cell epitopes have been observed in hepatitis B virus core antigen (HBcAg) .
  • B cell epitopes of the aoHGE polypeptides are fused to segments of HBcAG or to other antigens which contain strong T cell epitopes, to produce a fusion protein that can elicit a high titer antibody response against aoHGE.
  • aoHGE polypeptides of this invention may be prepared by recombinant means, chemical means, or combinations thereof.
  • the polypeptides may be generated by recombinant means using the DNA sequences of aoHGE isolate NCH-1 as set forth in the sequence listings contained herein.
  • DNA encoding serotypic variants of the polypeptides may likewise be cloned, e.g., using PCR and oligonucleotide primers derived from the sequences herein disclosed.
  • Oligonucleotide primers and other nucleic acid probes derived from the genes encoding the aoHGE polypeptides of this invention may also be used to isolate and clone other related proteins from aoHGE an. ' related rickettsia which may contain regions of DNA sequence homologous to the DNA sequences of this invention.
  • the DNA sequences of this invention may also be used in PCR reactions to detect the presence of aoHGE in a suspected infected sample. If the aoHGE polypeptides of this invention are produced recombinantly, they may be expressed in unicellular hosts. As is well known to one of skill in the art, in order to obtain high expression levels of foreign DNA sequences m a host, the sequences are generally operatively linked to transcriptional and translational expression control sequences that are functional in the chosen host. Preferably, the expression control sequences, and the gene of interest, will be contained in an expression vector that further comprises a selection marker.
  • the DNA sequences encoding the polypeptides of this invention may or may not encode a signal sequence. If the expression host is eukaryotic, it generally is preferred that a signal sequence be encoded so that the mature protein is secreted from the eukaryotic host. An ammo terminal methionine may or may not be present on the expressed polypeptides of this invention. f Lue terminal methionine is not cleaved by the expression host, it may, if desired, be chemically removed by standard techniques. A wide variety of expression host/vector combinations may be employed in expressing the DNA sequences of this invention.
  • Useful expression vectors for eukaryotic hosts include, for example, vectors comprising expression control sequences from SV40, bovme papilloma virus, adenovirus, adeno-associated virus, cytomegalovirus and retroviruses including lentiviruses .
  • Useful expression vectors for bacterial hosts include bacterial plasmids, such as those from E.
  • coli including pBluesc ⁇ pt, pGEX-2T, pUC vectors, col El, pCRl, pBR322, pMB9 and their derivatives, pET- 15, wider host range plasmids, such as RP4, phage DNAs, e.g., the numerous derivatives of phage lambda, e.g. ⁇ GTIO and ⁇ GTll, and other phages .
  • Useful expression vectors for yeast cells include the 2 ⁇ plasmid and derivatives thereof.
  • Useful vectors for insect cells include pVL 941.
  • any of a wide variety of expression control sequences -- sequences that control the expression of a DNA sequence when operatively linked to it — may be used in these vectors to express the DNA sequences of this invention.
  • Such useful expression control sequences include the expression control sequences associated with structural genes of the foregoing expression vectors.
  • useful expression control sequences include, for example, the early and late promoters of SV40 or adenovirus, the lac system, the trp system, the TAC or TRC system, the T3 and T7 promoters, the major operator and promoter regions of phage lambda, the control regions of fd coat protein, the promoter for 3-phosphoglycerate k ase or other glycolytic enzymes, the promoters of acid phosphatase, e.g., Pho5, the promoters of the yeast ⁇ - matmg system and other constitutive and mducible promoter sequences known to control the expression of genes of prokaryotic or eukaryotic cells or their viruses, and various combinations thereof.
  • the early and late promoters of SV40 or adenovirus the lac system, the trp system, the TAC or TRC system, the T3 and T7 promoters, the major operator and promoter regions of phage lambda, the control regions of fd coat protein, the promote
  • DNA sequences encoding the aoHGE polypeptides of this invention are cloned in the expression vector lambda ZAP II (Stratagene, La Jolla, CA) , in which expression from the lac promoter may be induced by IPTG.
  • DNA encoding the aoHGE polypeptides of this invention is inserted in frame into an expression vector that allows high level expression of the polypeptide as a glutathione S- transferase fusion protein.
  • a fusion protein thus contains amino acids encoded by the vector sequences as well as amino acids of the aoHGE polypeptide.
  • a wide variety of unicellular host cells are useful in expressing the DNA sequences of this invention. These hosts may include well known eukaryotic and prokaryotic hosts, such as strains of E.
  • the host in selecting a vector, the host must be considered because the vector must be replicated in it.
  • the vector's copy number, the ability to control that copy number, the ability to control integration, if any, and the expression of any other proteins encoded by the vector, such as antibiotic or other selection markers, should also be considered.
  • an expression control sequence a variety of factors should also be considered. These include, for example, the relative strength of the promoter sequence, its controllability, and its compatibility with the DNA sequence of this invention, particularly with regard to potential secondary structures. Unicellular hosts should be selected by consideration of their compatibility with the chosen vector, the toxicity of the product coded for by the DNA sequences of this invention, their secretion characteristics, their ability to fold the polypeptide correctly, their fermentation or culture requirements, and the ease of purification from them of the products coded for by the DNA sequences of this invention.
  • the molecules comprising the aoHGE polypeptides encoded by the DNA sequences of this invention may be isolated from the fermentation or cell culture and purified using any of a variety of conventional methods including: liquid chromatography such as normal or reversed phase, using HPLC, FPLC and the like; affinity chromatography (such as with inorganic ligands or monoclonal antibodies) ; size exclusion chromatography; immobilized metal chelate chromatography; gel electrophoresis ; and the like.
  • liquid chromatography such as normal or reversed phase, using HPLC, FPLC and the like
  • affinity chromatography such as with inorganic ligands or monoclonal antibodies
  • size exclusion chromatography such as with inorganic ligands or monoclonal antibodies
  • immobilized metal chelate chromatography immobilized metal chelate chromatography
  • gel electrophoresis and the like.
  • the aoHGE polypeptides may be generated by any of several chemical techniques. For example, they may be prepared using the solid-phase synthetic technique originally described by R. B. Mer ⁇ field, "Solid Phase Peptide Synthesis. I. The Synthesis Of A Tetrapeptide", J. Am. Chem. Soc. 83, pp. 2149-54 (1963) , or they may be prepared by synthesis in solution. A summary of peptide synthesis techniques may be found in E. Gross & H. J. Memhofer, 4 The Peptides : Analysis, Synthesis, Biol ogy; Modern Techniques Of Peptide And Ammo Acid Analysi s, John Wiley & Sons, (1981) and M. Bodanszky, Principles Of Peptide Synthesis, Sp ⁇ nger-Verlag (1984).
  • these synthetic methods comprise the sequential addition of one or more ammo acid residues to a growing peptide chain.
  • peptide coupling agents are used to facilitate this reaction.
  • peptide coupling agents suitable for the uses described herein see M. Bodansky, supra .
  • a suitable, selectively removable protecting group is utilized for ammo acids containing a reactive side g ⁇ oup, e.g., lysine.
  • antibodies directed against the aoHGE polypeptides are generated. Such antibodies are immunoglobulin molecules or portions thereof that are immunologically reactive with an aoHGE polypeptide of the present invention. It should be understood that the antibodies of this invention include antibodies immunologically reactive with fusion proteins and multimeric proteins comprising an aoHGE polypeptide. Antibodies directed against an aoHGE polypeptide may be generated by a variety of means including infection of a mammalian host with aoHGE, or by immunization of a mammalian host with an aoHGE polypeptide of the present invention.
  • Such antibodies may be polyclonal or monoclonal, it is preferred that they are monoclonal.
  • compositions and re granulocytic e r..: example, the level of aoHGE in infected ticks may be decreased by allowing them to feed on the blood of animals immunized with the aoHGE polypeptides of th.._ invention.
  • the antibodies of this invention also hav- variety of other uses. For example, they are use- reagents to screen for expression of the aoHGE polypeptides, either in libraries constructed from aoHGE DNA or from other samples in which the protei- may be present.
  • the antibodies of this mventio- are also useful to purify or remove polypeptides frc- given sample, to block or bind to specific epitopes z - the polypeptides and to direct various molecules, sue as toxins, to the surface of aoHGE .
  • mice are preferred as ar animal model.
  • any animal that is susceptible to infection with aoHGE nay be useful mice are not only susceptible to aoHGE infection but are also afflicted with clinical symptoms of a d ⁇ sea_ that is remarkably similar to human granulocytic ehrlichiosis in humans.
  • the humoral r esDO" of mice infected with aoHGE by tick transmission has been shown to be strongly similar to the human hjrc response.
  • a polypeptide is use:, . _::ere with a pharmaceutically c z z z _, 3 z.c as complete or incomplete Fre building::' I muramyl dipeptides) or I ⁇ 3I ⁇ .g complexes ) .
  • Such adjuvants ma ;p: ⁇ e from rapid dispersal by sea::a-.
  • tr.a the immunization sche:_- ⁇ .. :r more administrations cf ⁇ " :cread out over several weeks.
  • _ e - - ⁇ D or antibodies of this invention have : - to e effective in the screening prc: ⁇ . : ⁇ e used in a therapeutically erf-: pharmaceutical compositions and ⁇ - _ prevent human granulocytic ehrl_ ⁇ invention may be _ "er.tional depot forms.
  • Such dosage forms may include ,:e_ ⁇ t ⁇ cally acceptable carriers and adjuvants : . . are known to those of skill in the art.
  • eietable fatty acids water, salts or e_ trcyt s such as protamine sulfate, disodium hyiroge ⁇ phosphate, sodium chloride, zinc salts, colloidal silica, magnesium trisilicate, polyvinyl pyr roiidone, cellulose-based substances, and polyethylene glycol.
  • Adjuvants for topical or gel base fcrr.s may be selected from the group consisting of so ⁇ -:n ⁇ carboxymethylcellulose, polyacrylates, pc-_. oxyethylene-polyoxypropylene-block polymers, pc_.ethyiene glycol, and wood wax alcohols.
  • the vaccines and compositions of this invention may also include other components or be s c:e:t to other treatments during preparation to er.r.ar.oe their immunogenic character or to improve their tc_ .ra ee in patients.
  • compositions comprising an antibody of this in .::::: may be administered by a. variety of dosage ::. - and regimens similar to those used for other p . . :z irrmunotherapies and well known to those of
  • the aoHGE polypeptides may be formulated and administered to the patient using methods and compositions similar to those employed for other pharmaceutically important polypeptides (e.g., the vaccine against hepatitis) .
  • Any pharmaceutically acceptable dosage route including parenteral, intravenous, intramuscular, mtralesional or subcutaneous injection, may be used to administer the polypeptide or antibody composition.
  • the composition may be administered to the patient in any pharmaceutically acceptable dosage form including those which may be administered to a patient intravenously as bolus or by continued infusion over a period of hours, days, weeks or months, intramuscularly -- including paravertebrally and periarticularly — subcutaneously, intracutaneously, mtra-articularly, trasynovially, mtrathecally, mtralesionally, periostally or by oral or topical routes.
  • the compositions of the invention are in the form of a unit dose and will usually be administered to the patient intramuscularly.
  • aoHGE polypeptides or antibodies of this invention may be administered to the patient at one time or over a series of treatments.
  • the most effective mode of administration and dosage regimen will depend upon the level of lmmunogenicity, the particular composition and/or adjuvant used for treatment, the severity and course of the expected infection, previous therapy, the patient's health status and response to immunization, and the judgment of the treating physician.
  • the more highly immunogenic the polypeptide, the lower ⁇ or of immunizations, ecessary treatment time will ⁇ e -5 administered with an osa ⁇ 'lli consist of 10 ⁇ g - . -y eptide, and preferably, -1000 ⁇ g.
  • an osa ⁇ 'lli consist of 10 ⁇ g - . -y eptide, and preferably, -1000 ⁇ g.
  • Useful I5C0M, simple metal salts ⁇ oil based adjuvants - " round's adjuvant.
  • -s ea the polypeptide -Ision with the
  • E. coli excressmg proteins corner- :_ng an aoriGE polypeptide are administered orally to nc-"-man -nimals according to "etno ⁇ s -nnown _n tne art, decrease or lessen the :e'er-ty of ao- ' C ⁇ infect- Fir example, a palatable re:. er.
  • oa::er ⁇ a expre _ng an aoHGE polypeptide, a-ine or -n ::e form of a --5 ion protein or multimeric protein, may oe aomm_ste: - .Mtn animal food to be oon:-me ⁇ cy ⁇ __ ⁇ mice or "er animals that harbor
  • .ot e -mbodiment
  • the antibodies of :;.:.- on as well as the aoHGE polypeptides of :n. .tio.n, and the DNA sequences encoding them are . .5 diagnostic agents for detecting infect::: oHG ⁇ .
  • the polypeptides are capable of bindm: co ⁇ y molecules produced in animals, including tnat are infected with aoHGE, and the an:: are oapabie of binding to aoHGE or an_.ige..s :
  • agents may be included in a kit which may also e instructions for use and other appropriate ; , preferably a means for detecting when tne tioe or antibody is bound.
  • the • :e :r antibody may be labeled with a detection m- .: allows for the detection of the polypeptide :•.
  • the detection means may be a fluorescent labeling agent such as fluorescem isocyanate (FIC) , fluorescein isothiocyanate (FITC) , and the like, an enzyme, such as horseradish peroxidase (HRP) , glucose oxidase or the like, a radioactive element such as 125I or Cr that produces gamma ray emissions, or a radioactive element that emits positrons which produce gamma rays upon encounters with electrons present in the test solution, such as C, 0, or N. Binding may also be detected by other methods, for example via avid -biotm complexes.
  • FIC fluorescem isocyanate
  • FITC fluorescein isothiocyanate
  • an enzyme such as horseradish peroxidase (HRP) , glucose oxidase or the like, a radioactive element such as 125I or Cr that produces gamma ray emissions, or a radioactive element that emits posi
  • monoclonal antibody molecules produced by a hybridoma can be metabolically labeled by incorporation of radioisotope-conta mg ammo acids m the culture medium, or polypeptides may be conjugated or coupled to a detection means through activated functional groups.
  • the diagnostic kits of the present invention may be used to detect the presence of a quantity of aoHGE or anti-aoHGE antibodies a oody fluid sample such as serum, plasma or urine.
  • a oody fluid sample such as serum, plasma or urine.
  • an aoHGE polypeptide or an antibody of the present invention is bound to a solid support typically by adsorption from an aqueous medium.
  • Useful solid matrices are well known in the art, and include crosslmked dextran; agarose; polystyrene; polyvmylchlo ⁇ de; cross-linked polyacrylamide; nitrocellulose or nylon-based materials; tubes, plates or the wells of microtiter plates.
  • polypeptides or antibodies of the present invention may be used as diagnostic agents in solution form or as a substantially dry powder, e.g., in lyophilized form.
  • aoHGE polypeptides and antibodies directed against those polypeptides provide much more specific diagnostic reagents than whole aoHGE and thus may alleviate such pitfalls as false positive and false negative results.
  • aoHGE polypeptides of this invention that are selectively expressed in the infected host and not in cultured aoHGE, and antibodies directed against such polypeptides, allow detection of antigens and antibodies m samples that are undetectable by diagnostic methods using lysates of cultured spirochetes as the antigen.
  • One skilled m the art will realize that it may also be advantageous in the preparation of detection reagents to utilize epitopes from more than one aoHGE protein and antibodies directed against such epitopes. It may be particularly advantageous to use epitopes of aoHGE polypeptides that elicit antibodies early in aoHGE infection m combination with epitopes from other aoHGE polypeptides that elicit antibodies that occur m the later stages of human granulocytic ehrlichiosis. Diagnostic reagents containing multiple epitopes which are reactive with antibodies appearing at different are useful to detect the presence of anti-aoHGE antibodies throughout the course of infection and to diagnose human granulocytic ehrlichiosis at all stages.
  • a diagnostic kit comprising diagnostic reagents to detect aoHGE as well as other pathogens found in the same tick vector, for example, Borrelia burgdorferi and Babesia mi croti , and instructions for their use.
  • the polypeptides and antibodies of the present invention, and compositions and methods comprising them, may also be useful for detection, prevention, and treatment of other infections caused by ⁇ ckettsia which may contain surface proteins sharing ammo acid sequence or conformational similarities with the aoHGE polypeptides of the present invention, for example, Ehrlichia equi and Ehrli chia phagocytophila .
  • the following examples are set forth. These examples are for purposes of illustration only, and are not to be construed as limiting the scope of the invention in any manner.
  • mice We established the laboratory mouse as an animal model in which to investigate the pathogenesis of HGE and to screen the aoHGE polypeptides and antibodies of the present invention for their ability to elicit an immune response effective to treat or protect against aoHGE infection and/or human granulocytic ehrlichiosis. We chose to use mice because of the extensive lmmunologic, biologic and genetic parameters available for manipulation.
  • mice We examined the susceptibility of various strains of mice to infection with the NCH-1 isolate of the HGE agent. We inoculated the mice via tick-borne infection or syringe oculatin by several different routes. [S.W. Barthold et al . , J. Inf .Pis. , (in press).] We chose mice having maximum genetic disparity and representing different H-2 haplotypes. The mice used for these studies included C3H/HeJ, C3H/HeN and C3H/Smn.CIcrHsd/sc ⁇ d mice, purchased from the Jackson Laboratory (Bar Harbor, ME.), NCI Animal Production Program, Frederick Cancer Research Center (Fede ⁇ ck, MD) , and Harlan Sprague Dawley, Inc. (Indianapolis,
  • CD-I mice were purchased from Charles River Breeding Laboratories (Wilmington, MA) .
  • mice To examine the course of tick-borne aoHGE infection, we placed 5 aoHGE-mfected nymphal ticks on naive C3H mice and allowed them to feed to repletion. All of the mice became infected, having visible morulae in peripheral blood smears at 5-10 days after tick feeding. We necropsied 4 mice with verified infection and 4 age-matched control mice at days 5, 10, 17 and 24 after tick feeding.
  • mice exhibited transient splenomegaly and we were able to culture aoHGE from peripheral blood and spleen from all mice on days 17 and 24. All infected mice also developed detectable antibodies to aoHGE by day 10.
  • Infected mice developed transient hematologic aberrations similar to those described in human HGE including leukopenia, with a reduction in total leukocytes, granulocytes and lymphocytes, and anemia. Morulae were found only granulocytes. At all time points, there was marked hematopoiesis in spleens and bone marrow of all infected mice and the lungs of most infected mice showed perivascular lymphoid nodules indicative of antigenic stimulation.
  • mice To assess the susceptibility of mice to syringe inoculation, we inoculated 3-5 week old mice both intraperitoneally and subcutaneously with 0.1 ml of serial dilutions (undiluted, 1:10, 1:100 and 1:000) of blood from aoHGE-mfected SCID mice (10% granulocytes with morulae) .
  • aoHGE-mfected SCID mice 10% granulocytes with morulae
  • mice We collected blood from the mice on days 7, 14, 17 and 21 after inoculation and examined peripheral blood smears for morulae to establish aoHGE infection. Mice inoculated by both routes became infected, although they appeared to be more susceptible to infection by l.p. inoculation.
  • Xenodiagnosis occurrence of aoHGE infection in unmfected ticks which feed on infected mice
  • mice remained persistently infected for up to 55 days.
  • mice infected with aoHGE by syringe inoculation at days 5, 10, 30 and 60 after inoculation.
  • mice remained persistently infected for at least 55 days after inoculation, and had a 100% correlation between infection, seroconversion, and disease.
  • mice of various ages We inoculated groups of 4-5 mice at 1 day, 3 days , 5 days, 1 week and 3 weeks of age by l.p. injection with 0.1 ml of infected SCID mouse blood and assessed infection by hematocrit, spleen weight, morulae and PCR at 10 days after inoculation. e ⁇ .:covered that mice moculated at 1 day and 3 days had a significantly higher percent of granulocytes with morulae than older mice. All infected mice had increased spleen weights.
  • aoHGE polypeptides that elicit a humoral response in an infected animal, including humans, we probed lysates of aoHGE-infected HL-60 cells with sera from patients infected with aoHGE and from mice experimentally infected with aoHGE .
  • HL-60 cells American Type Culture Collection 240-CCL
  • Iscove's modified Dulbecco's medium supplemented with 20% fetal bovme serum, with no added antibiotic, maintained at 37°C with 5% carbon dioxide.
  • C3H specific pathogen free mice Jackson Laboratories, Bar Harbor, ME
  • mice by placing five hardened nymphs on each mouse and allowing the ticks to feed to repletion.
  • antibodies m the human anti-aoHGE antisera reacted with aoHGE proteins having molecular weights of 40, 44, 65, 80, 94, 105, 110, 115 and 125 kDa.
  • the murine sera additionally reacted with aoHGE proteins with molecular weights of 25, 34 and 35 kDa and proteins with molecular weights between 40 and 44 kDa.
  • Sera from mice infected by tick bite, but not sera from mice infected by syringe reacted with an 80 kDa aoHGE protein.
  • aoHGE from infected HL-60 cells prepared as described in Example III, as follows.
  • aoHGE NCH-1 isolate
  • the critical steps were adequate lysis of the HL-60 cells while leaving the aoHGE cells intact so that subsequent incubation with excess RNase and DNase (to eliminate HL-60 RNA and DNA) does not affect the aoHGE.
  • the N- terminal amino acid sequence of the 80-kDa protein which we designated the 80-1 polypeptide, is set forth in SEQ ID NO: 7.
  • GenBank Genetics Computer Group Program (University of Wisconsin Biotechnology Center, Madison, WI).
  • ECPNAK E. coli
  • HSP70 human heat shock protein 70.
  • the most closely homologous protein identified in the database is the B . burgdorferi HSP- 70.
  • a search of the Genbank Database revealed that the 44-1 polypeptide is approximately 70% homologous with a region from ammo acid 130-138 of the major surface protein 2 (MSP-2) of Anaplasma margmal e .
  • the 44-2 polypeptide is homologous with a region of MSP-2 from ammo acid 362-372.
  • the MSP-2 protein is encoded by a gene which is one member of a large family of genes with a high degree of homology m A. margmal e genome.
  • A. margmale is an important veterinary erythroparasitic pathogen and MSP-2 may confer protection against A. margmale infection [G.H.
  • aoHGE polypeptides from the NCH-1 isolate and from other strains of aoHGE, which are useful for the detection, treatment or prevention of human granulocytic ehrlichiosis or for the study of the pathenogenesis of the disease may be isolated and sequenced without undue experimentation according to the methods described herein.
  • genomic aoHGE DNA may be isolated according to any of a variety of methods known in the art. See, for example, J. Sambrook et al . , supra .
  • PCR amplification of the regions of the DNA encoding the 44 kDa aoHGE polypeptide may be performed by any of a variety of methods known m the art.
  • ⁇ he D fR product may be isolated and purified according to any methods known in the art, for example, isolating the product by agaraose gel electrophoresis and purifying using gene clean (BIO 101) according to the manufacturer's instructions.
  • aoHGE polypeptides To identify immunodominant aoHGE polypeptides, we performed an immunoblot of lysates of aoHGE NCH-1 infected HL-60 cells proteins, prepared as described in Example III, using twenty sera from 13 patients with documented E. chaff eensis infection. Dr. J.G. Olson (CDC, Atlanta, GA) kindly provided the patient sera. None of the E. chaff eensi s sera reacted with the 40, 44, 65 and 80 kDa aoHGE proteins. One sera out of the twenty reacted weakly with the 110 kDa aoHGE protein and another was reactive with a 120-kDa aoHGE protein.
  • Immunoscreenmg Kit (Stratagene) . We induced protein production from the recombinant plaques with lOmM IPTG and transferred the proteins to duplicate plaque lifts on nitrocellulose filters according to methods well known in the art.
  • Example VIII Cloning of Immunogenic aoHGE Genes Screening of an aoHGE NCH-1 genomic expression library, prepared as described in Example VII, revealed seven clones that reacted with human and mouse antisera.
  • one of skill in the art could readily generate a nested set of deletions in the DNA insert with the Erase-A-Base System (Promega, Madison, WI) (e.g., using Smal to generate the 5' blunt end and BstXI to generate a 3' overhang), and then sequence the subclones using, e.g., the Sequenase Kit (United States Biochemical Corp., Cleveland, OH) and reconstruct the entire sequence using MacVector (International Biotechnology, Inc., New Haven, CT) .
  • Erase-A-Base System Promega, Madison, WI
  • Smal to generate the 5' blunt end and BstXI to generate a 3' overhang
  • sequence the subclones using, e.g., the Sequenase Kit (United States Biochemical Corp., Cleveland, OH) and reconstruct the entire sequence using MacVector (International Biotechnology, Inc., New Haven, CT) .
  • the sequence of the plasmid inserts from clones E6 and E7 were determined by the Yale Protein Purification and Analysis Facility using the Circumvent Thermal Cycle Dideoxy DNA sequencing kit (New England Biolabs) . Conditions for denaturation, annealing and extension were: 94° C for 30 sec, 55° C for 20 sec, and 72° C for 20 sec, respectively.
  • the DNA sequence of clone E6 is set forth in SEQ ID NO: 1.
  • the deduced ammo acid sequence is set forth in SEQ ID NO: 2.
  • sequences E5-3A, E5-3B, E5- 5A, E5-5B and E5-6 are set forth in Figures 13-17, respectively.
  • sequences E5-3B, E5- 5B and E5-6 have regions of substantial homology with regions of the 44-kDa protein.
  • nucleotides 400-600 and 900-1300, approximately, of the 44-kDa protein define regions of homology among the sequences.
  • Example IX - Expression of the E6 Polypeptide To express the aoHGE genes of this invention, we utilized the pGEX-2T vector, which is capable of directing expression of cloned inserts as glutathione S-transferase fusion proteins [see J. Sears et al., "Molecular Mapping of OspA-Mediated Immunity to Lyme Borreliosis", J. Immunol. , 147, pp. 1995-2000 (1991)].
  • the vector also contains a thrombm cleavage site immediately following the GT protein, thus, allowing the recovery of recombinant proteins without the GT fusion partner.
  • aoHGE polypeptides of this invention may be recombinantly expressed without a fusion partner using techniques well known m the art.
  • Example IX After inducing protein expression as described m Example IX, we place the E. coli in phosphate buffered saline (PBS) with 1% Triton and subject them to sonication. We purify the glutathione S-transferase-aoHGE polypeptide fusion protein (GT-E6) from cell lysates as follows.
  • PBS phosphate buffered saline
  • GT-E6 glutathione S-transferase-aoHGE polypeptide fusion protein
  • mice We generate antibodies directed against the aoHGE polypeptides of this invention as follows.
  • mice Frrederick Cancer Research Center
  • antibodies directed against aoHGE polypeptides of this invention can be obtained by immunizing mice with cells expressing a DNA sequence encoding an aoHGE polypeptide of this invention.
  • I_FA indirect immunofluorescence assay
  • mice We then challenge the mice with the various isolates of aoHGE to determine if active immunization elicits a protective immune response against a range of aoHGE isolates. We then sacrifice the mice and evaluate for infection and disease as described supra . We identify protective aoHGE polypeptides by their ability to prevent aoHGE infection or disease.
  • mice with purified recombinant aoHGE polypeptides prepared as described in Example 10 we immunize mice with purified recombinant aoHGE polypeptides prepared as described in Example 10, and boost periodically.
  • As a control we inject mice with purified glutathione S- transferase. After the final boost, we bleed the mice and prepare an immunoblot as described in Example III, to determine if the mice are synthesizing antibody against the recombinant protein.
  • protective recombinant aoHGE polypeptides by their ability to prevent aoHGE infection and disease.
  • One way to identify regions of aoHGE proteins that contain protective B-cell epitopes is to determine which regions of the protein are recognized by monoclonal antibodies that confer protection against aoHGE infection.
  • Binding of the protective monoclonal antibody to a fragment indicates that the fragment contains a protective (B cell) epitope.
  • This example does not necessarily imply that the epitope recognized by the monoclonal antibody is the only protective epitope in the aoHGE protein. Nor does it imply that the region encoding the B-cell epitope recognized by the monoclonal antibody does not also contain a T-cell epitope. However, it does illustrate one method that may be used to identify protective epitopes of aoHGE proteins .
  • Another way to identify regions of aoHGE proteins that contain B cell epitopes is to use aoHGE polypeptide fusion proteins to absorb antibodies from protective polyclonal serum.
  • the various T7-aoHGE or aoHGE-glutathione S-transferase fusion proteins are coupled to CnBr activated Sepharore in order to construct a column, using standard techniques.
  • aoHGE polypeptides of this invention were able to elicit an immune response that is effective to protect against aoHGE infection.
  • CFA complete Freund's adjuvant
  • IFA incomplete Freund's adjuvant
  • mice Fourteen days after the final boost, we bled the mice and examined the sera from each animal for aoHGE antibodies by probing lysates of aoHGE-infected HL-60 cells in immunoblot as descrioed Example I.
  • aoHGE-immunized mice had high titers of aoHGE-specifIC antibodies, detectable by immunoblot at a serum dilution of at least 1:2,000.
  • mice actively immunized and sham immunized mice by syringe and tick-borne inoculation.
  • mice actively immunized with purified, -killed aoHGE with 100 ⁇ l of blood from a mouse that had been infected with aoHGE for 2 weeks.
  • mice 10 days after challenge and evaluated for aoHGE infection by PCR using aoHGE specific 16S ribosomal DNA primers [P. Pancholi et al . , "Ixodes dammmi as a Potential Vector of Human Granulocytic Ehrlichiosis, " J. Inf. Dis . , 172, pp.
  • mice developed aoHGE infection, based on aoHGE-specific DNA the blood. In contrast, no aoHGE DNA could be detected in the blood of 4 of 5 mice vaccinated with purified, -killed aoHGE .
  • tick inoculation we placed 3-4 aoHGE-mfected I. dammmi nymphs which had fed to repletion on CD-I mice that had been infected for 2 weeks with aoHGE .
  • the aoHGE infection rate of the ticks was 85% as determined by visual inspection of the salivary glands using the Feulgen reaction [S.R. Telford et al., Proc . Na tl . Acad. Sci . USA, 93, pp. 6209-6214, supra ] .
  • the ticks were allowed to engorge to repletion on immunized and control mice.
  • mice were examined for aoHGE by PCR using aoHGE specific 16S rDNA, supra .
  • aoHGE has a chromosome that migrates at approximately 700 kb in pulse-field gel electrophoresis .
  • To determine which epitopes of aoHGE polypeptides are able to elicit such antibodies we immunize mice with the various aoHGE polypeptide fusion proteins, and challenge the mice with various isolates of aoHGE as described, supra .
  • mice with aoHGE polypeptide fusion protein were immunized with aoHGE and boost.
  • ticks infected with aoHGE as described m Example III, on mice immunized with GT (control), with aoHGE-GT fusion proteins. After feeding to repletion, the ticks are allowed to naturally detach over water. Approximately ten days post-repletion, we homogenize individual ticks in PBS and spot aliquots on slides. We allow the slides to air-dry, fix in cold acetone and assay by direct or indirect immunofluorescence .
  • mice were passively immunized with normal mouse serum.
  • aoHGE antiserum diluted 1:5 PBS was administered to mice.
  • mice were passively immunized with normal mouse serum.
  • One day following passive immunization we challenged immunized and control mice with aoHGE by intraperitoneal inoculation with 50 ⁇ l of blood from mice that had been infected with NCH-1 isolate two weeks earlier, an by tick transmission using 3-4 aoHGE infected ticks. Mice were boosted with 200 ⁇ l of aoHGE antiserum diluted 1:5 with PBS on days 4, 8 and 12 after challenge.
  • serial dilution PCR amplified DNA was discernible serum from control mice at a dilution of 10 3 -10 8 whereas product could only be obtained from serum of immunized mice up to a dilution of 10 3 .
  • the PCR assay can detect a single aoHGE organism. Accordingly, passive immunization either conferred complete protection or lessened the severity of aoHGE infection.
  • mice In terms of clinical symptoms, the control mice but not the protected mice exhibited neutropenia (462 cell/mm 3 ⁇ 280 SD compared 3,240 cells/mm 3 ⁇ 1,340 SD) and splenomegaly (0.27 g ⁇ 0.05 SD compared to 0.12g ⁇ 0.03 SD) .
  • anti-aoHGE monoclonal antibodies by fusion of spleen cells from mice infected with aoHGE to mouse P3X63Ag8 myeloma cells, according to methods well known to those of skill in the art. We then determine the isotypes of the monoclonals, and select antibodies reactive with aoHGE for aoHGE immunization studies .
  • mice We then passively immunize mice with supernatant from monoclonal antibody producing cells, and challenge the animals with aoHGE. We then sacrifice the mice and examine the blood and tissues for signs of aoHGE infection and disease.
  • mice immunized with recombinant aoHGE polypeptides confers protection.
  • One of skill in the art would understand that to detect a protective effect, one can vary the experimental conditions.
  • antiserum by immunization with a recombinant polypeptide without GT, collect antiserum at a different time point when the titer is higher, passively immunize with more antiserum, decrease the aoHGE challenge dose, or other means known in the art.
  • the gene fragments could be cloned into pGEMEX (Promega, Madison, WS) and expressed as T7 gene 10 fusion proteins. Such proteins would be insoluble and thus easily purified by recovery of the insoluble pellet fraction followed by solubilization m denaturants such as urea.
  • the fragments could be expressed as glutathione S-transferase fusion proteins as described above. We then transform appropriate host cells and induce expression of the fragments.
  • One way to identify fragments that contain protective B-cell epitopes is to use the individual purified fragments to actively immunize mice, as described above. After challenge of the mice with aoHGE, we determine the presence of infection by blood and spleen cultures in HL-60 cells and by examination of peripheral blood smears for granulocytic morulae.
  • Another technique to identify protective epitopes is to use the various fragments to immunize mice, allow ticks infected with aoHGE to feed on the mice, and then determine whether the immune response elicited by the fragments is sufficient to cause a decrease in the level of aoHGE in the ticks. Any epitopes which elicit such a response, even if they are not sufficient by themselves to confer protection against subsequent infection with aoHGE, may be useful in a multicomponent vaccine.
  • the protective epitopes are able to elicit antibodies that will protect against subsequent infection with isolates of aoHGE other than the isolate from which the protective polypeptide was cloned. We then design a vaccine around those epitopes. If none of the protective epitopes is able to confer protection against infection with other isolates of aoHGE, it may be particularly advantageous to isolate the corresponding aoHGE polypeptides from those isolates. A multicomponent vaccine may then be constructed that comprises multiple epitopes from several different aoHGE isolates. Such a vaccine will, thus, elicit antibodies that will confer protection against a variety of different isolates.
  • Example XXIV Identification of T cell epitopes Stimulation in animals of a humoral immune response containing high titer neutralizing antibodies will be facilitated by antigens containing both T cell and B cell epitopes.
  • T cell lines Shortly after priming, we harvest the lymph nodes and generate m vi tro T cell lines. These T cell lines are then cloned using limiting dilution and soft agar techniques. We use these T cell clones to determine which polypeptides contain T cell epitopes. The T cell clones are stimulated with the various polypeptides and syngeneic antigen presenting cells. Exposure of the T cell clones to the polypeptides that contain T cell epitopes in the presence of antigen presenting cells causes the T cells to proliferate, which we measure by 3 H-Thymidme incorporation. We also measure lymphokine production by the stimulated T cell clones by standard methods .
  • T cell epitopes of the polypeptides recognized by human T cells we isolate T cell clones from aoHGE-infected patients of multiple
  • T cell epitopes are identified by stimulating the clones with the various polypeptides
  • T cell epitopes are then correlated with Class II HLA antigens such as DR, DP, and DQ.
  • Class II HLA antigens such as DR, DP, and DQ.
  • the correlation is performed by utilization of B lymphoblastoid cell lines expressing various HLA genes.
  • a given T cell clone is mixed with the appropriate B lymphoblastoid cell line and an aoHGE polypeptide, the B cell will be able to present the polypeptide to the T cell.
  • T cell epitopes may be identified by adoptive transfer of T cells from mice immunized with various of the aoHGE polypeptides of this invention to naive mice, according to methods well known to those of skill in the art. [See, for example, M.S. DeSouza et al., "Long-Term Study of Cell-Mediated Responses to Borrelia burgdorferi in the Laboratory Mouse", Infect. Immun., 61, pp. 1814-22 (1993)].
  • T and B cell epitopes After identifying T cell epitopes of the aoHGE polypeptides, we construct recombinant proteins comprising these epitopes as well as the B cell epitopes recognized by neutralizing antibodies. These fusion proteins, by virtue of containing both T cell and B cell epitopes, permit antigen presentation to T cells by B cells expressing surface immunoglobulin. These T cells in turn stimulate B cells that express surface lmmunoglobin, leading to the production of high titer neutralizing antibodies. We also construct fusion proteins from the aoHGE polypeptides by linking regions of the polypeptides determined to contain B cell epitopes to strong T cell epitopes of other antigens.
  • oligonucleotide homologous to am o acids 120 to 140 of the Hepatitis B virus core antigen. This region of the core antigen has been shown to contain a strong T cell epitope [D.R. Millich, et al., supra 1.
  • the oligonucleotide is then ligated to the 5' and 3' ends of segments of DNA encoding the B cell epitopes recognized by neutralizing antibodies.
  • the recombinant DNA molecules are then used to express a fusion protein comprising a B cell epitope from the aoHGE polypeptide and a T cell epitope from the core antigen, thus enhancing the lmmunogenicity of the polypeptide.
  • fusion proteins comprising epitopes of the aoHGE polypeptides as well as epitopes of the tetanus toxoid protein.
  • Bacterial flagellm are potent stimulators of cellular and humoral responses, and can be used as vectors for protective antigens [S.M.C. Newton, C. Jacob, B. Stocker, "Immune Response To Cholera Toxin Epitope Inserted In Salmonella Flagellm", Science, 244, pp. 70-72 (1989) ] .
  • fusion proteins comprising B cell epitopes from one of the aoHGE polypeptides and T cell epitopes from a different aoHGE polypeptide or other immunogenic aoHGE polypeptides.
  • fusion proteins comprising T cell epitopes from aoHGE polypeptides and B cell epitopes from an aoHGE polypeptide and/or other immunogenic aoHGE polypeptides. Construction of these fusion proteins is accomplished by recombinant DNA techniques well known to those of skill in the art. Fusion proteins and antibodies directed against them, are used in methods and composition to detect, treat, and prevent human granulocytic ehrlichiosis as caused by infection with aoHGE .
  • mice We use 0.1 ml of this suspension to orally inoculate mice. Inoculation may be performed by gavage using a ball tipped metal needle. We boost the mice with the same amount of bacteria on days 10, 20, 30 and 40. We inoculate control mice in a similar fashion with bacteria lacking the pl97-aoHGE polypeptide plasmid. We bleed the mice 7 days after the second and fourth boosts and conduct immunoblots on extracts of aoHGE, as described in Example I, to detect and quantify antibodies against the aoHGE polypeptide. Fourteen days after the last boost, we challenge the mice by inoculation with aoHGE and evaluate for infection and disease.
  • AAT TAT TTA ATT TTT TAT AAA AAT AAC TGC CAA TAT TTA TAT GAA GTA 240 Asn Tyr Leu He Phe Tyr Lys Asn Asn Cys Gin Tyr Leu Tyr Glu Val 65 70 75 80
  • MOLECULE TYPE other nucleic acid
  • MOLECULE TYPE other nucleic acid
  • MOLECULE TYPE DNA (genomic) (ix) FEATURE:
  • GAAGAGGAGC AAAGTCCTGC GCTTGATGTG ATAAGTAGTG AATTGCCTAA GGATGACATT 240
  • TCTCCTGTGT TTGGAGAAGA AGAGCGTGCC GAAGAAGATT TTGATGTGTA TCAAGATCCA 960 GTAGAAGTGG ATGATGAGGG AGTTGCTGAT TCTTCTGAGG ATTTAGAGGC TGATTCTGGT 1020

Landscapes

  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Communicable Diseases (AREA)
  • General Chemical & Material Sciences (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biochemistry (AREA)
  • Gastroenterology & Hepatology (AREA)
  • Oncology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Genetics & Genomics (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Animal Behavior & Ethology (AREA)
  • Public Health (AREA)
  • Veterinary Medicine (AREA)
  • Peptides Or Proteins (AREA)
  • Medicines Containing Antibodies Or Antigens For Use As Internal Diagnostic Agents (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

Methods and compositions for the prevention, treatment and diagnosis of human granulocytic ehrlichiosis. aoHGE polypeptides, serotypic variants thereof, fragments thereof and derivatives thereof. Fusion proteins and multimeric proteins comprising same. Vaccines comprising aoHGE polypeptides alone or in addition to other protective aoHGE polypeptides. DNA sequences, recombinant DNA molecules and transformed host cells useful in the compositions and methods. Antibodies directed against the aoHGE polypeptides, and diagnostic kits comprising the polypeptides or antibodies.

Description

COMPOSITIONS AND METHODS FOR THE
PREVENTION AND DIAGNOSIS OF HUMAN GRANULOCYTIC EHRLICHIOSIS
This application claims priority under 35
U.S.C. § 120 from pending United States provisional application Serial Number 60/027,180, filed October 1, 1996.
This invention was made with government support under Grant numbers Al 26815, Al 37993 and Al 39002 awarded by the National Institutes of Health. The government has certain rights in the invention.
TECHNICAL FIELD OF THE INVENTION
This invention relates to compositions and methods useful for studying the pathogenicity of and for the prevention, treatment and diagnosis of human granulocytic ehrlichiosis (HGE) .
More particularly, this invention relates to polypeptides and DNA sequences which encode them, from the agent of HGE, referred to herein as "aoHGE". Such polypeptides and DNA sequences are useful to detect the presence of aoHGE in humans, to diagnose human granulocytic ehrlichiosis and related disorders caused by aoHGE infection, and to elicit an immune response which is effective to prevent or lessen the severity, for some period of time, of aoHGE infection. Also within the scope of this invention are antibodies directed against aoHGE polypeptides, compositions including vaccines comprising the antibodies.
This invention also relates to vaccines comprising aoHGE, one or more of the aoHGE polypeptides or antibodies of this invention. Also within the scope of this invention are diagnostic kits comprising the aoHGE polypeptides, DNA sequences encoding them or antibodies of this invention.
This invention also relates to methods for selecting protective aoHGE polypeptides and antibodies. Methods for using the aforementioned polypeptides, DNA sequences and antibodies are also within the scope of this invention.
BACKGROUND OF THE INVENTION
Human ehrlichioses are emerging zoonotic infections caused by gram-negative obligate intracellular bacteria of the genus Ehrli chia [J.S.
Dumler et al . , "Ehrlichial diseases of humans: emerging tick-borne infections," Clin . Infect . Dis . , 20, pp. 1102-10 (1995); J. Dumler and D. Walker, "Emergence of the Ehrlichioses as Human Health Problems, " Emerging Infectious Diseases, 2, pp. 18-29 (1996)]. Two distinct human ehrlichioses occur in the United States: a human monocytic ehrlichiosis, caused by Ehrlichia chaffeensi s, which specifically infects monocytes, and human granulocytic ehrlichiosis, which infects granulocytes . The causative agent of human granulocytic ehrlichiosis is a recently identified bacteria of the genus Ehrlichia which has not yet been named. It is sometimes referred to as E. microti or as "the agent of HGE" [S.R. Telford et al., "Perpetuation of the Agent of Human Granulocytic Ehrlichiosis In a Deer Tick- Rodent Cycle," Proc . Na tl . Acad. Sci . USA, 93, pp. 6209-6214 (1996)]. The Ehrlichia which causes human granulocytic ehrlichiosis will be referred to herein as "aoHGE."
Although many veterinary ehrlichioses have been described over the last several decades, human ehrlichioses have only recently been characterized. E. chaff eensis was discovered in 1990 and HGE was first described in 1994 [S.M. Chen et al., "Identification of a Granulocytotropic Ehrlichia Species As the Etiologic Agent of Human Disease," J. Clin . Microbiol . , 32, pp. 589-595 (1994)]. Since 1994, more than 200 cases of human granulocytic ehrlichiosis have been documented, predominantly in upper midwestern and northeastern states, but also "in the northwest [D. Walker et al., "Emergence of the Ehrlichioses as Human Health Problems," Emerging Infecti ous Di seases, 2 , pp. 18-29 (1996) ] . Human granulocytic ehrlichiosis is associated with a wide range of clinical symptoms. The illness is most commonly char -terized by influenza-like symptoms (including fever, myalgia and headache), leukopenia, anemia, thrombocytopenia and elevated serum transaminase levels [J. Dumler et al., "Ehrlichial Diseases of Humans: Emerging Tick-borne Infections," Clin . Infect . Di s . , 20, pp. 1102-1110 (1995)]. The spectrum of symptoms ranges from undiagnosed, subclinical infection to severe disease including gastrointestinal and pulmonary hemorrhage and death. Furthermore, in some cases of human granulocytic ehrlichiosis, opportunistic infections have been demonstrated, suggesting altered neutrophil function as well as possible defects in acquired immune responses [D. Walker et al., Emerging Infectious Diseases, supra ] . The detection of ehrlichial DNA by PCR twenty- eight days after the onset of symptoms m a patient who was not treated with antibiotics suggests that the bacteria may persist within the host [D. Walker et al . , Emerging Infectious Diseases, supra] .
Human ehrlichioses are tick-borne infections. Although many vertebrates are potentially infected with aoHGE, the white-footed mouse ( Peromyscus leucopus) has been identified as the major animal reservoir for aoHGE [S.R. Telford, III et al . , "Perpetuation of the Agent of Human Granulocytic Ehrlichiosis In a Deer Tick- Rodent Cycle," Proc . Na tl . Acad. Sci . USA, 93, pp.
6209-6214 (1996) ] . The tick vector has been shown to be Ixodes scapulari s (also referred to as Ixodes dammini ) in the Ixodes ri cinus complex [S. et al . , Proc . Na tl . Acad. Sci . USA, 93, supra ] . Ticks acquire aoHGE by feeding on an infected host. Humans are infected by the bite of infected ticks. Not unexpectedly, the disease is prevalent in regions of the country where Lyme disease and babesiosis, diseases also associated with I. scapularis, are common [L.A. Magnarelli et al., "Coexistence of antibodies To Tick- borne Pathogens of Babesiosis, Ehrlichiosis and Lyme Borreliosis in Human Sera, J. Clin. Mi crobi ol . , 33, pp. 3054-3057 (1995)]. In endemic areas of Connecticut and in Westchester County in New York, up to 50% of ticks collected may carry aoHGE and approximately 20% may simultaneously be infected with B. burgdorferi (the agent of Lyme disease) [D. Fish, unpublished data] .
Diagnosis of human granulocytic ehrlichiosis is difficult. Currently, the most definitive method for diagnosing acute infection is identification of the organism, and the characteristic morulae, within the cytoplasm of granulocytes in a peripheral blood smear. However, because less than 1% of the granulocytes may be infected and because the patient usually exhibits leukopenia, detection of the intracytoplasmic inclusions is unreliable and results in a substantial number of false negative diagnoses.
Direct cultivation of aoHGE in HL-60 cells and the development of granulocytic morulae in the peripheral blood of mice inoculated with patient serum has recently been reported [S. et al., supra ] . However, these methods are expensive and labor- intensive and have not yet been used for diagnosis. PCR analysis based on aoHGE specific 16S ribosomal DNA sequences shows some promise but also may produce false-positive and false-negative results. Nor does PCR indicate the existence of viable organisms. Immunofluorescent serology using as antigen cells infected with E. equi , to which aoHGE is closely related, has been moderately successful for diagnosing aoHGE. However, serologic testing is not yet standardized, and results may vary between laboratories and commercial kits, causing false negative and, more commonly, false positive results. In addition, the disease often goes unrecognized, as the ticks are small and easy to miss. Unlike Lyme disease, aoHGE infection does not produce a characteristic rash. Accordingly, there is an urgent need to identify aoHGE proteins for diagnostic use. No reliable laboratory model for human granulocytic ehrlichiosis has been developed. In order to study the pathogenesis of human granulocytic ehrlichiosis and to develop agents and methods to prevent and diagnose the disease, a cost-effective animal model which mimics the human disease and the immune response to selected aoHGE antigens is required.
Human granulocytic ehrlichiosis is a potentially fatal disease if antibiotic therapy is not initiated in a timely fashion. As prevention of tick infestation is imperfect, and human granulocytic ehrlichiosis may be missed or misdiagnosed when it does appear, there is a great need for vaccines against the disease. No aoHGE polypeptides for use in vaccines have been identified to date. Thus, there exists an urgent need for the determination of the antigens of aoHGE and related proteins which are able to elicit a protective immune response.
In addition, human granulocytic ehrlichiosis is becoming a recognized human health problem in endemic areas and the incidence of the disease is expected to rise over the next several years. Human granulocytic ehrlichiosis is transmitted by ticks that carry a number of different pathogens including Babesia mi croti , the agent of babesiosis, and Borrelia burgdorferi , the agent of Lyme disease. A greater understanding of human granulocytic ehrlichiosis may provide insight into clinical symptoms that result in misdiagnosis of other tick-borne infections, most notably Lyme disease.
DISCLOSURE OF THE INVENTION The present invention solves the problems referred to above by providing means to study, diagnose, prevent and treat aoHGE infection and human granulocytic ehrlichiosis and related disorders caused by aoHGE infection. More particularly, this invention provides aoHGE polypeptides, DNA sequences that encode the polypeptides, antibodies directed against the polypeptides and compositions and methods comprising the aoHGE polypeptides, DNA sequences and antibodies. This invention further provides a single or multicomponent vaccine comprising aoHGE or one or more aoHGE polypeptides or antibodies of this invention.
This invention provides DNA sequences that code for the aoHGE polypeptides of this invention, recombinant DNA molecules that are characterized by those DNA sequences, unicellular hosts transformed with those DNA seq ent s and molecules, and methods of using those sequences, molecules and hosts to produce the aoHGE polypeptides and multicomponent vaccines of this invention. DNA sequences of this invention are also advantageously used in methods and means for the diagnosis of aoHGE infection and human granulocytic ehrlichiosis .
Also within the scope of this invention are diagnostic means and methods characterized by aoHGE polypeptides, DNA sequences encoding them or antibodies directed against these polypeptides. These means and methods are useful for the detection of human granulocytic ehrlichiosis and aoHGE infection. They are also useful in following the course of treatment against such infection. In patients previously inoculated with the vaccines of this invention, the detection means and methods disclosed herein are also useful for determining if booster inoculations are appropriate.
This invention further provides an immunocompetent, non-human, mammalian model for human granulocytic ehrlichiosis for use in studying the pathology of the disease and in screening for aoHGE polypeptides and antibodies that are capable of protecting a treated subject against aoHGE infection or human granulocytic ehrlichiosis and related disorders caused by aoHGE infection.
Finally, this invention also provides methods for the identification and isolation of additional aoHGE polypeptides, as well as compositions and methods comprising such polypeptides.
BRIEF DESCRIPTION OF THE DRAWINGS
Figure 1A-D depicts the DNA and amino acid sequences of the E6 polypeptide of aoHGE isolate NCH-1 (SEQ ID NOS: 1 and 2) . Figure 2A-D depicts the DNA and amino acid sequences of the E7 polypeptide of aoHGE isolate NCH-1 (SEQ ID NOS: 3 and 4) .
Figure 3 depicts the amino acid sequence of the 44-1 polypeptide from the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 5) . Figure 4 depicts the amino acid sequence of the 44-2 polypeptide from the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 6) .
Figure 5A-B depicts the DNA sequence of the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 10) . Figure 6 depicts the amino acid sequence of the 44 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: ) , and indicates the position of the 44-1 and 44-2 polypeptides. Figure 7 depicts the amino acid sequence of the 80-1 polypeptide from the 80 kDa protein of aoHGE isolate NCH-1 (SEQ ID NO: 7) . x indicates the amino acid positions in which a characteristic chromatogram was not obtained. Figure 8 shows the ELISA and IFA antibody titers in sera from aoHGE infected mice to aoHGE-HL-60 antigen at 10, 17 and 24 days after tick-borne infection. Titers are expressed as the last positive 2-fold reciprocal dilution of serum, 4 mice/interval. Figure 9 shows immunoblot results of serum samples from 18 aoHGE patients. Titers 1:80 and above were considered positive. ND: not done, a: acute serum, c: convalescent serum. For patient 18, there were two convalescent sera, one at 3 weeks and one at 6 weeks after tick bite.
Figure 10 depicts the 5' and 3' primers used to amplify the eβ gene (SEQ ID NOS: 8 and 9) . The underlined portion of the 3' primer indicates the inserted Xhol site. The underlined portion of the 5' primer indicates the inserted EcoRI site.
Figure 11A-C depicts the DNA sequence of the eM4 polypeptide of aoHGE isolate NCH-1 (SEQ ID NO: 12) . Figure 12A-B depicts the amino acid sequence of the eM4 polypeptide of aoHGE isolate NCH-1 (SEQ ID
NO: ) .
Figure 13A-B depicts the DNA sequence designated E5-3A (SEQ ID NO: ), which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
Figure 14A-B depicts the DNA sequence designated E5-3B (SEQ ID NO: ), which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
Figure 15A-B depicts the DNA sequence designated E5-5A (SEQ ID NO: ), which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
Figure 16 depicts the DNA sequence designated E5-5B (SEQ ID NO: ) , which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
Figure 17A-C depicts the DNA sequence designated E5-6 (SEQ ID NO: ) , which was isolated from a genomic aoHGE isolate NCH-1 library using oligonucleotide probes derived from the 44-kDa DNA sequence (SEQ ID NO: 10) .
Figure 18 is a matrix plot depicting a region of homology between approximately nucleotides 200-400 and 600-1000 the E5-3B DNA sequence and approximately nucleotides 400-600 and 900-1200, respectively, of the 44-kDa DNA sequence.
Figure 19 is a matrix plot depicting a region of homology between approximately nucleotides 300-650 of the E5-5B DNA sequence and approximately nucleotides 900-1200 of the 44-kDa DNA sequence.
Figure 20 is a matrix plot depicting a region of homology between approximately nucleotides 1000-1400 and 1700-1900 of the E5-5B DNA sequence and approximately nucleotides 400-600 and 900-1300 of the 44-kDa DNA sequence.
DETAILED DESCRIPTION OF THE INVENTION This invention relates to aoHGE polypeptides and DNA sequences encoding them, antibodies directed against those polypeptides, compositions comprising the polypeptides, DNA sequences or antibodies, and methods for identifying additional aoHGE polypeptides and antibodies and methods for the detection, treatment and prevention of human granulocytic ehrlichiosis and related disorders ^aused by aoHGE infection.
More specifically, in one embodiment, this invention provides a 40-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide. In another embodiment, this invention provides a 44-kDa aoHGE polypeptide and fragments 44-1 and 44-2 thereof, ind compositions and methods comprising the polypeptide and fragments.
In another embodiment, this invention provides a 65-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide. In another embodiment, this invention provides a 80-kDa aoHGE polypeptide and the 80-1 fragment thereof, and compositions and methods comprising the polypeptide and fragment. In another embodiment, this invention provides a 94-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides a 105-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides a 110-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides a 115-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides a 125-kDa aoHGE polypeptide and compositions and methods comprising the polypeptide. In another embodiment, this invention provides an E6 polypeptide and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides an E7 polypeptide encoded and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides an eM4 polypeptide encoded and compositions and methods comprising the polypeptide.
In another embodiment, this invention provides an E5-3A, E5-3B, E5-5A, E5-5B and E5-6 DNA ssequences, and compositions and methods comprising them. The preferred compositions and methods of each of the aforementioned embodiments are characterized by immunogenic aoHGE polypeptides. As used herein, an "immunogenic aoHGE polypeptide" is any aoHGE polypeptide that, when administered to an animal, is capable of eliciting a corresponding antibody. In particular, immunogenic aoHGE polypeptides are intended to include additional aoHGE polypeptides which may be identified according to the methods disclosed herein. The most preferred compositions and methods of each of the aforementioned embodiments are characterized by aoHGE polypeptides which elicit in treated animals, the formation of an immune response which is effective to prevent or lessen the severity, for some period of time, of aoHGE infection.
In another preferred embodiment, this invention provides a vaccine comprising aoHGE, one or more aoHGE polypeptides of this invention or one or more antibodies directed against aoHGE or a polypeptide of this invention.
All of the aoHGE polypeptides provided by this invention, and the DNA sequences encoding them, are substantially free of an Ehrli chia bacterium or fragments thereof, and thus may be used in a variety of applications without the risk of unintentional infection or contamination with undesired Ehrlichia components. Accordingly, the aoHGE polypeptides of this invention are particularly advantageous in compositions and methods for the diagnosis and prevention of aoHGE infection.
As used herein, a polypeptide that is "substantially free of an Ehrli chia bacterium or fragments thereof" is a polypeptide that, when introduced into an animal susceptible to aoHGE infection, fails to produce any Ehrlichia bacteria detectable by microscopic examination of a blood or tissue smear, by PCR amplification using aoHGE specific primers, by m si tu hybridization with aoHGE specific probes or by any other method for detecting aoHGE infection. Alternatively, it is a polypeptide that is detectable as a single band on an immunoblot probed with polyclonal anti-aoHGE anti-serum.
In another preferred embodiment, this invention provides immunodominant aoHGE polypeptides. As used herein, an "immunodominant aoHGE polypeptide" denotes an aoHGE polypeptide, or derivative thereof, that is recognized by antibodies elicited by infection with aoHGE, but which is substantially less reactive with antibodies elicited by infection with other bacteria. As used herein, an "immunodominant region" of an aoHGE polypeptide denotes a region of an aoHGE polypeptide, or derivatives thereof, that is recognized by antibodies elicited by aoHGE infection but that is substantially less reactive than the full-length aoHGE protein when reacted with antibodies elicited by infection with other bacteria. As used herein, "substantially less reactive" means, that when reacted in an ELISA or on an immunoblot with patient serum which contains antibodies elicited by infection with bacteria other than aoHGE, the level of reactivity would be at least 10-fold lower than the level of reactivity with serum from patients infected with aoHGE . More preferably, the immunodominant polypeptides would be bound at a level at least 50-fold lower than the level of binding that occurs with antibodies in sera from patients infected with aoHGE. Most preferably, there would be no detectable binding. In yet another embodiment, this invention provides antibodies directed against the aoHGE polypeptides of this invention, and pharmaceutically effective compositions and methods comprising those antibodies. The antibodies of this embodiment are those that are reactive with the aoHGE polypeptides of this invention, and are effective to diagnose, treat or protect against aoHGE infection and human granulocytic ehrlichiosis. Such antibodies may be used in a variety of applications, including to detect the presence of aoHGE, to screen for expression of novel aoHGE polypeptides, to purify novel aoHGE polypeptides, to block or bind to the aoHGE polypeptides, to direct molecules to the surface of aoHGE or aoHGE infected cells and to prevent or lessen the severity, for some period of time, of aoHGE infection.
In still another embodiment, this invention relates to diagnostic means and methods characterized by the aoHGE polypeptides, DNA sequences or antibodies of the invention. This invention further provides an immunocompetent nonhuman, mammalian model for human HGE. The laborato__, mouse model, described herein, is characterized by clinical features that closely mimic HGE in humans. Thus, the mouse model is useful for selecting the preferred aoHGE polypeptides and antibodies of this invention that are effective to protect against aoHGE infection and human granulocytic ehrlichiosis .
A further embodiment of this invention is a novel diagnostic assay for detecting the presence of aoHGE in a biological sample. The assay provided herein tests the ability of the biological sample to produce aoHGE infection in infant laboratory mice. In a preferred embodiment, the infant mice are 5 days old or less. In a more preferred embodiment, the mice are 3 days old or less. In the most preferred embodiment, the mice are 1 day of age.
In order to further define this invention, the following terms and definitions are herein provided. As used herein, an "aoHGE polypeptide" is a polypeptide encoded by a DNA sequence of aoHGE. For example, aoHGE polypeptides include the 40, 44, 65, 80, 94, 110, 115, or 125-kDa polypeptide expressed by aoHGE, as described in Example I, infra, an E6, E7 or eM4 polypeptide or fragments or derivatives thereof. As used herein, an "aoHGE polypeptide" includes polypeptides encoded by a DNA sequence of any organism that causes HGE.
As used herein, a "40-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrlichia bacterium or fragments thereof and which is selected from the group consisting of:
(a) a 40-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof; (b) fragments comprising at least 8 amino acids taken as a block from the 40-kDa aoHGE polypeptide of
(a) ;
(c) derivatives of a 40-kDa aoHGE polypeptide of (a) or (b) , said derivatives being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ;
(d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 40-kDa aoHGE polypeptide of (a) or (b) or (c) ;
(e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and the 40-kDa aoHGE polypeptide of (a) or
(b) or (c) ; and
(f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 40-kDa aoHGE polypeptide of (a) or (b) or (c) . As used herein, a "44-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) the 44-kDa aoHGE protein having the amino acid sequence of SEQ ID NO: , and serotypic variants thereof;
(b) the 44-1 polypeptide of SEQ ID NO: 5;
(c) the 44-2 polypeptide of SEQ ID NO: 6;
(d) a polypeptide encoded by a DNA sequence which hybridizes to a DNA sequence encoding the polypeptide of (a) under stringent conditions; (e) fragments comprising at least 8 amino acids taken as a block from any one of the polypeptides of (a) -(d);
(f) a derivative of a polypeptide of (a) -(e), said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) -(e);
(g) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a polypeptide of (a) -(f); (h) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a polypeptide of (a) -(f); and
(i) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a polypeptide of (a)-(f).
As used herein, a "65-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) a 65-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof; (b) fragments comprising at least 8 amino acids taken as a block from the 65-kDa aoHGE polypeptide of (a) ;
(c) a derivative of a 65-kDa aoHGE polypeptide of (a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ; (d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 65-kDa aoHGE polypeptide of (a) or (b) or (c) ;
(e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and the 65-kDa aoHGE polypeptide of (a) or
(b) or (c) ; and (f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 65-kDa aoHGE polypeptide of (a) or (b) or (c) .
As used herein, an "80-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) an 80-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof;
(b) the 80-1 polypeptide of SEQ ID NO: 7;
(c) fragments comprising at lease 8 amino acids taken as a block from the 80-kDa aoHGE polypeptide of (a) or (b) ; (d) a derivative of a polypeptide of (a) -(c), said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) -(c); (e) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a polypeptide of (a) -(d); (f) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a polypeptide of (a) -(d); and
(g) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a polypeptide of (a) -(d).
As used herein, a "94-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chi a bacterium or fragments thereof and which is selected from the group consisting of:
(a) a 94-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof; (b) fragments comprising at least 8 amino acids taken as a block from the 94-kDa aoHGE polypeptide of (a);
(c) a derivative of a 94-kDa aoHGE polypeptide of (a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ;
(d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 94-kDa aoHGE polypeptide of (a) or (b) or (c) ;
(e) aoHGE polypeptides than are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 94-kDa aoHGE polypeptide of (a) or (b) or (c) ; and (f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 94-kDa aoHGE polypeptide of (a) or (b) or (c) .
As used herein, a "105-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) a 105-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof;
(b) fragments comprising at least 8 amino acids taken as a block from the 105-kDa aoHGE polypeptide of (a) ; (c) a derivative of a 105-kDa aoHGE polypeptide of
(a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ;
(d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive witn a 105-kDa aoHGE polypeptide of (a) or (b) or (c) ;
(e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 105-kDa aoHGE polypeptide of (a) or
(b) or (c) ; and
(f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 105-kDa aoHGE polypeptide of (a) or (b) or (c) .
As used herein, a "110-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) a 110-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof;
(b) fragments comprising at least 8 amino acids taken as a block from the 100-kDa aoHGE polypeptide of (a); (c) a derivative of a 110-kDa aoHGE polypeptide of
(a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ;
(d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 110-kDa aoHGE polypeptide of (a) or (b) or (c) ;
(e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 110-kDa aoHGE polypeptide of (a) or
(b) or (c) ; and
(f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 110-kDa aoHGE polypeptide of (a) or (b) or (c) .
As used herein, a "115-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of
Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of: (a) a 115-kDa aoHGE protein appearing as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof;
(b) fragments comprising at least 8 amino acids taken as a block from the 115-kDa aoHGE polypeptide of (a) ;
(c) a derivative of a 115-kDa aoHGE polypeptide of (a) or (b) , said derivative being at least 80% identical in ammo acid sequence to the corresponding polypeptide of (a) or (b) ; (d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 115-kDa aoHGE polypeptide of (a) or (b) or (c) ; (e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 115-kDa polypeptide of (a) or (b) or (c) ; and
(f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 115-kDa aoHGE polypeptide of (a) or (b) or (c) .
As used herein, a "125-kDa aoHGE polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) a 125-kDa aoHGE protein appearing as a single band on a Western blots after reacting with sera from an animal infected with aoHGE, and serotypic variants thereof; (b) fragments comprising at least 8 ammo acids taken as a block from the 125-kDa aoHGE polypeptide of (a) ; (c) a derivative of a 125-kDa aoHGE polypeptide of
(a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ; (d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a 125-kDa aoHGE polypeptide of (a) or (b) or (c) ; (e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a 125-kDa aoHGE polypeptide of (a) or
(b) or (c) ; and
(f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a 125-kDa aoHGE polypeptide of (a) or (b) or (c) .
As used herein, an "E6 polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) an E6 protein of having the amino acid sequence set forth in SEQ ID NO: 2 and serotypic variants thereof;
(b) fragments comprising at least 8 amino acids taken as a block from the E6 polypeptide of (a) ;
(c) a derivative of an E6 polypeptide of (a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b); (d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with an E6 polypeptide of (a) or (b) or (c) ;
(e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and an E6 polypeptide of (a) or (b) or (c) ; and
(f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with an E6 polypeptide of (a) or (b) or (c) . As used herein, an "E7 polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) an E7 protein having the amino acid sequence set forth in SEQ ID NO: 4 and serotypic variants thereof;
(b) fragments comprising at least 8 amino acids taken as a block from the E7 protein of (a) ;
(c) a derivative of an E7 polypeptide of (a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a)or (b);
(e) aoHGE polypeptideε that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with an E7 polypeptide of (a) - (c);
(f) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and an E7 polypeptide of (a) -(c); and (g) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with an E7 polypeptide of (a) -(c).
As used herein, an "eM4 polypeptide" denotes a polypeptide which is substantially free of Ehrli chia bacterium or fragments thereof and which is selected from the group consisting of:
(a) the eM4 polypeptide having an amino acid sequence encoded by the DNA sequence of SEQ ID NO: 12, and serotypic variants thereof;
(b) fragments comprising at least 8 amino acids taken as a block from the polypeptide of (a) ;
(c) a derivative of a polypeptide of (a) or (b) , said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a) or (b) ;
(d) aoHGE polypeptides that are immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with a polypeptide of (a) or (b) or (c);
(e) aoHGE polypeptides that are capable of eliciting antibodies that are immunologically reactive with aoHGE and a polypeptide of (a) or (b) or (c) ; and (f) aoHGE polypeptides that are immunologically reactive with antibodies elicited by immunization with a polypeptide of (a) or (b) or (c) .
As used herein, a "serotypic variant" of an aoHGE polypeptide of this invention, also referred to herein as a "variant", is any naturally occurring aoHGE polypeptide which may be encoded, in whole or in part, by a DNA sequence which hybridizes, at 20-27°C below Tm, to any portion of the DNA sequence encoding the aoHGE polypeptide disclosed herein.
One of skill in the art will understand that serotypic variants of aoHGE polypeptides include those polypeptides encoded by DNA sequences of which any portion may be amplified by using the polymerase chain reaction and oligonucleotide primers derived from any portion of the DNA sequence encoding the aoHGE polypeptide. As used herein, a "protective aoHGE polypeptide" is any aoHGE polypeptide that, when administered to an animal, is capable of eliciting an immune response that is effective to prevent or lessen the severity, for some period of time, of aoHGE infection or HGE. Preventing or lessening the severity of infection may be evidenced by a change in the physiological manifestations of aoHGE infection, including fever, myalgia, arthralgia, anemia, leukocytopenia, thrombocytopenia, neutropenia, elevated hepatic enzyme levels, gastro-intestinal or pulmonary hemorrhaging and other disorders caused by aoHGE infection. ma be evidenced by a decrease in or absence of aoHGE in the treated animal. And, it may be evidenced by a decrease in the level of aoHGE in infected ticks which have fed on treated animals.
One of skill in the art will understand that probes and oligonucleotide primers derived from the DNA encoding an aoHGE polypeptide may be used to isolate and clone further variants of aoHGE proteins from other aoHGE isolates and perhaps from other rickettsia as well, which are useful in the methods and compositions of this invention. As used herein, a "derivative" an aoHGE polypeptide is a polypeptide in which one or more physical, chemical, or biological properties has been altered. Such modifications include, but are not limited to: amino acid substitutions, modifications, additions or deletions; alterations in the pattern of lipidation, glycosylation or phosphorylation; reactions of free amino, carboxyl, or hydroxyl side groups of the amino acid residues present in the polypeptide with other organic and non-organic molecules; and other modifications, any of which may result in changes in primary, secondary or tertiary structure.
As used herein, a "protective epitope" is (1) an epitope which is recognized by a protective antibody, and/or (2) an epitope which, when used to immunize an animal, elicits an immune response sufficient to prevent or lessen the severity for some period of time, of aoHGE infection or HGE. Again, preventing or lessening the severity of infection may be evidenced by a change in the physiological manifestations of aoHGE infection including fever, myalgia, arthralgia, anemia, leukocytopenia, thrombocytopenia, neutropenia, elevated hepatic enzyme levels, gastro-intestinal or pulmonary hemorrhaging, and other related disorders. It may be evidenced by a decrease in the level of aoHGE in the treated animal. And, it may also be evidenced by a decrease in the level of aoHGE in infected ticks feeding on treated animals. A protective epitope may comprise a T cell epitope, a B cell epitope, or combinations thereof.
As used herein, a "protective antibody" is an antibody that confers protection, for some period of time, against aoHGE infection or any one of the physiological disorders associated with aoHGE infection or HGE.
As used herein, a "T cell epitope" is an epitope which, when presented to T cells by antigen presenting cells, results in a T cell response such as clonal expansion or expression of lymphokines or other irrvrtiunostimulatory molecules. A T cell epitope may also be an epitope recognized by cytotoxic T cells that may affect intracellular aoHGE infection. A strong T cell epitope is a T cell epitope which elicits a strong T cell response.
As used herein, a "B cell epitope" is the simplest spatial conformation of an antigen which reacts with a specific antibody.
As used herein, a "therapeutically effective amount" of a polypeptide or of an antibody is the amount that, when administered to an animal, elicits an. immune response that is effective to prevent or lessen the severity, for some period of time, of aoHGE infection.
As used herein, an "an anti-aoHGE polypeptide antibody, " also referred to as "an antibody of this invention, " is an antibody directed against an aoHGE polypeptide of this invention. For example, an antibody of this invention may be directed against a 40-kDa, 44-kDa, 65-kDa, 80-kDa, 94-KDa, 110-kDa, 115- kDa, 125-kDa polypeptide expressed by aoHGE, as described in Example I, infra, an E6, E7 or eM4 polypeptide, or a fragment, derivative or serotypic variant of the aforementioned polypeptides. An anti- aoHGE polypeptide antibody of this invention includes antibodies directed against polypeptides expressed by aoHGE, or fragments or derivatives thereof, that are immunologically cross-reactive with any one of the aforementioned polypeptides. Finally, an anti-aoHGE polypeptide antibody of this invention includes antibodies directed against other aoHGE polypeptides identified according to methods taught herein.
As used herein, an "anti-aoHGE polypeptide antibody" is an immunoglobulin molecule, or portion thereof, that is immunologically reactive with an aoHGE polypeptide of the present invention and that was either elicited by immunization with aoHGE or an aoHGE polypeptide of this invention or was isolated or identified by its reactivity with an aoHGE polypeptide of this invention.
An anti-aoHGE polypeptide antibody may be an intact immunoglobulin molecule or a portion of an immunoglobulin molecule that contains an intact antigen binding site, including those portions known in the art as F(v), Fab, Fab' and F(ab')2. It should be understood that an anti-aoHGE polypeptide antibody may also be a protective antibody.
The aoHGE polypeptides disclosed herein are immunologically reactive with antisera generated by infection of a mammalian host with aoHGE . Accordingly, they are useful in methods and compositions to diagnose human granulocytic ehrlichiosis, and in therapautic compositions to stimulate immunological clearance of aoHGE during ongoing infection. In addition, because at least some, if not all of the aoHGE polypeptides disclosed herein are protective surface proteins of aoHGE, they are particularly useful in single and multicomponent vaccines against human granulocytic ehrlichiosis. In this regard, multicomponent vaccines are preferred because such vaccines may be formulated to more closely resemble the immunogens presented by replication- competent aoHGE, and because such vaccines are more likely to confer broad-spectrum protection than a vaccine comprising only a single aoHGE polypeptide. Multicomponent vaccines according to this invention may also contain polypeptides which characterize other vaccines useful for immunization against diseases other than human granulocytic ehrlichiosis such as, for example, Lyme disease, human monocytic ehrlichiosis, babesiosis, diphtheria, polio, hepatitis, and measles. Such multicomponent vaccines are typically incorporated into a single composition.
The preferred compositions and methods of this invention comprise aoHGE polypeptides having enhanced immunogenicity. Such polypeptides may result when the native forms of the polypeptides or fragments thereof are modified or subjected to treatments to enhance their immunogenic character in the intended recipient.
Numerous techniques are available and well known to those of skill in the art which may be used, without undue experimentation, to substantially increase the immui ^genicity of the aoHGE polypeptides herein disclosed. For example, aoHGE polypeptides of this invention may be modified by coupling to dinitrophenol groups or arsanilic acid, or by denaturation with heat and/or SDS. Particularly if the polypeptides are small, chemically synthesized polypeptides, it may be desirable to couple them to an immunogenic carrier. The coupling, of course, must not interfere with the ability of either the polypeptide or the carrier to function appropriately. For a review of some general considerations in coupling strategies, see Antibodies. A Laboratory Manual, Cold Spring Harbor Laboratory, ed. E. Harlow and D. Lane (1988) .
Useful immunogenic carriers are well known in the art. Examples of such carriers are keyhole limpet hemocyanm (KLH) ; albumins such as bovme serum albumin (BSA) and ovalbumm, PPD (purified protein derivative of tuberculin) ; red blood cells; tetanus toxoid; cholera toxoid; agarose beads; activated carbon; or bentonite. Modification of the ammo acid sequence of the aoHGE polypeptides disclosed herein in order to alter the lipidation state is also a method which may be used to increase their lmmunogenicity or alter their biochemical properties. For example, the polypeptides or fragments thereof may be expressed with or without the signal and other sequences that may direct addition of lipid moieties.
As will be apparent from the disclosure to follow, the polypeptides may also be prepared with the objective of increasing stability or rendering the molecules more amenable to purification and preparation. One such technique is to express the polypeptides as fusion proteins comprising other aoHGE or non-aoHGE sequences. In accordance with this invention, derivatives of the aoHGE polypeptides may be prepared by a variety of methods, including by m vi tro manipulation of the DNA encoding the native polypeptides and subsequent expression of the modified DNA, by chemical synthesis of derivatized DNA sequences, or by chemical or biological manipulation of expressed amino acid sequences.
For example, derivatives may be produced by substitution of one or more amino acids with a different natural amino acid, an amino acid derivative or non-native amino acid. Those of skill in the art will understand that conservative substitution is preferred, e.g., 3-methylhistidine may be substituted for histidine, 4-hydroxyproline may be substituted for proline, 5-hydroxylysine may be substituted for lysine, and the like. Causing amino acid substitutions which are less conservative may also result in desired derivatives, e.g., by causing changes in charge, conformation and other biological properties. Such substitutions would include for example, substitution of a hydrophilic residue for a hydrophobic residue, substitution of a cysteine or proline for another residue, substitution of a residue having a small side chain for a residue having a bulky side chain or substitution of a residue having a net positive charge for a residue having a net negative charge.
When the result of a given substitution cannot be predicted with certainty, the derivatives may be readily assayed according to the methods disclosed herein to determine the presence or absence of the desired characteristics. In particular, the immunogenicity, immunodominance and/or protectiveness of a derivative of this invention can be readily determined using methods disclosed in the Examples.
In a preferred embodiment of this invention, the aoHGE polypeptides disclosed herein are prepared as part of a larger fusion protein. For example, an aoHGE polypeptide of this invention may be fused at its N- terminus or C-terminus to a different immunogenic aoHGE polypeptide, to a non-aoHGE polypeptide or to combinations thereof, to produce fusion proteins comprising the aoHGE polypeptide.
In a preferred embodiment of this invention, fusion proteins comprising aoHGE polypeptides are constructed comprising B cell and/or T cell epitopes from multiple serotypic variants of aoHGE, each variant differing from another with respect to the locations or sequences of the epitopes within the polypeptide. In a more preferred embodiment, fusion proteins are constructed which comprise one or more of the aoHGE polypeptides fused to other aoHGE polypeptides. Such fusion proteins are particularly effective in the prevention, treatment and diagnosis of human granulocytic ehrlichiosis as caused by a wide spectrum of aoHGE isolates.
In another preferred embodiment of this invention, the aoHGE polypeptides are fused to moieties, such as immunoglobulin domains, which may increase the stability and prolong the in vivo plasma half-life of the polypeptide. Such fusions may be prepared without undue experimentation according to methods well known to those of skill in the art, for example, in accordance with the teachings of United States patent 4,946,778, or United States patent 5,116,964. The exact site of the fusion is not critical as long as the polypeptide retains the desired biological activity. Such determinations may be made according to the teachings herein or by other methods known to those of skill in the art.
It is preferred that the fusion proteins comprising the aoHGE polypeptides be produced at the DNA level, e.g., by constructing a nucleic acid molecule encoding the fusion protein, transforming host cells with the molecule, inducing the cells to express the fusion protein, and recovering the fusion protein from the cell culture. Alternatively, the fusion proteins may be produced after gene expression according to known methods. The aoHGE polypeptides may also be part of larger multimeric molecules which may be produced recombinantly or may be synthesized chemically. Such multimers may also include the polypeptides fused or coupled to moieties other than amino acids, including lipids and carbohydrates.
Preferably, the multimeric proteins will consist of multipxe T or B cell epitopes or combinations thereof repeated within the same molecule, either randomly, or with spacers (amino acid or otherwise) between them.
In a preferred embodiment of this invention, aoHGE is incorporated into a vaccine. As disclosed in
Examples and , animals immunized with such a vaccine produce antibodies that confer protection against aoHGE infection.
In another preferred embodiment of this invention, an aoHGE polypeptide of this invention which is also a protective aoHGE polypeptide is incorporated into a single component vaccine. In a more preferred embodiment of this invention, aoHGE polypeptides of this invention which are also protective aoHGE polypeptides are incorporated into a multicomponent vaccine comprising other protective aoHGE polypeptides. In addition to A multicomponent vaccine may also contain protective polypeptides useful for immunization against other diseases such as, for example, Lyme disease, human monocytic ehrlichiosis, babesiosis, diphtheria, polio, hepatitis, and measles. Such a vaccine, by virtue of its ability to elicit antibodies to a variety of protective aoHGE polypeptides, will be effective to protect against human granulocytic ehrlichiosis as caused by a broad spectrum of different aoHGE isolates, even those that may not express one or more of the aoHGE proteins.
The multicomponent vaccine may contain the aoHGE polypeptides as part of a multimeric molecule m which the various components are covalently associated. Alternatively, it may contain multiple individual components. For example, a multicomponent vaccine may be prepared comprising two or more of the aoHGE polypeptides, wherein each polypeptide is expressed and purified from independent cell cultures and the polypeptides are combined prior to or during formulation.
Alternatively, a multicomponent vaccine may be prepared from heterodimers or tetramers wherein the polypeptides have been fused to immunoglobulin chains or portions thereof. Such a vaccine could comprise, for example, a 44-kDa aoHGE polypeptide fused to an immunoglobulin heavy chain and an E6 aoHGE polypeptide fused to an immunoglobulin light chain, and could be produced by transforming a host cell with DNA encoding the heavy chain fusion and DNA encoding the light chain fusion. One of skill in the art will understand that the host cell selected should be capable of assembling the two chains appropriately. Alternatively, the heavy and light chain fusions could be produced from separate cell lines and allowed to associate after purification. The desirability of including a particular component and the relative proportions of each component may be determined by using the assay systems disclosed herein, or by using other systems known to those in the art. Most preferably, the multicomponent vaccine will comprise numerous T cell and B cell epitopes of protective aoHGE polypeptides.
This invention also contemplates that the aoHGE polypeptides of this invention, either alone or combined, may be administered to an animal via a liposome delivery system in order to enhance their stability and/or immunogenicity . Delivery of the aoHGE polypeptides via liposomes may be particularly advantageous because the liposome may be internalized by phagocytic cells in the treated animal. Such cells, upon ingesting the liposome, would digest the liposomal membrane and subsequently present the polypeptides to the immune system in conjunction with other molecules required to elicit a strong immune response.
The liposome system may be any variety of unilamellar vesicles, multilamellar vesicles, or stable plurilamellar vesicles, and may be prepared and administered according to methods well known to those of skill in the art, for example in accordance with the teachings of United States patents 5,169,637, 4,762,915, 5,000,958 or 5,185,154. In addition, it may be desirable to express the aoHGE polypeptides of this invention, as well as other selected aoHGE polypeptides, as lipoproteins, in order to enhance their binding to liposomes.
Any of the aoHGE polypeptides of this invention may be used in the form of a pharmaceutically acceptable salt. Suitable acids and bases which are capable of forming salts with the polypeptides of the present invention are well known to those of skill in the art, and include inorganic and organic acids and bases . According to this invention, we describe a method which comprises the steps of treating an animal with a therapeutically effective amount of an aoHGE polypeptide, or a fusion protein or a multimeric protein comprising an aoHGE polypeptide, in a manner sufficient to prevent or lessen the severity, for some period of time, of aoHGE infection. The polypeptides that are preferred for use in such methods are those that contain protective epitopes. Such protective epitopes may be B cell epitopes, T cell epitopes, or combinations thereof.
According to another embodiment of this invention, we describe a method which comprises the steps of treating an animal with a multicomponent vaccine comprising a therapeutically effective amount of an aoHGE polypeptide, or a fusion protein or multimeric protein comprising such polypeptide in a manner sufficient to prevent or lessen the severity, for some period of time, of aoHGE infection. Again, the polypeptides, fusion proteins and multimeric proteins that are preferred for use in such methods are those that contain protective epitopes, which may be B cell epitopes, T cell epitopes, or combinations thereof.
The most preferred polypeptides, fusion proteins and multimeric proteins for use in these compositions and methods are those containing both strong T cell and B cell epitopes. Without being bound by theory, we believe that this is the best way to stimulate high titer antibodies that are effective to neutralize aoHGE infection. Such preferred polypeptides will be internalized by B cells expressing surface immunoglobulin that recognizes the B cell epitope (s). The B cells will then process the antigen and present it to T cells. The T cells will recognize the T cell epitope (s) and respond by proliferating and producing lymphokines which in turn cause B cells to differentiate into antibody producing plasma cells. Thus, in this system, a closed autocatalytic circuit exists which will result in the amplification of both B and T cell responses, leading ultimately to production of a strong immune response which includes high titer antibodies against the aoHGE polypeptide.
One of skill in the art will also understand that it may be acr. antageous to administer the aoHGE polypeptides of this invention in a form that will favor the production of T-helper cells type 1 (TH1), which help activate macrophages, and/or T-helper cells type 2 (TH2), which help B cells to generate antibody responses. Aside from administering epitopes which are strong T cell or B cell epitopes, the induction of TH1 or TH2 cells may also be favored by the mode of administration of the polypeptide. For example, aoHGE polypeptides may be administered in certain doses or with particular adjuvants and immunomodulators, for example with interferon-gamma or interleuken-12 (TH1 response) or interleukin-4 or interleuken-10 (TH2 response) .
To prepare the preferred polypeptides of this invention, in one embodiment, overlapping fragments of the aoHGE polypeptides of this invention are constructed as described herein. The polypeptides that contain B cell epitopes may be identified in a variety of ways for example by their ability to (1) remove protective antibodies from polyclonal antiserum directed against the polypeptide or (2) elicit an immune response which is effective to prevent or lessen the severity of aoHGE infection.
Alternatively, the polypeptides may be used to produce monoclonal antibodies which are screened for their ability to confer protection against aoHGE infection when used to immunize naive animals. Once a given monoclonal antibody is found to confer protection, the particular epitope that is recognized by that antibody may then be identified.
As recognition of T cell epitopes is MHC restricted, the polypeptides that contain T cell epitopes may be identified in vi tro by testing them for their ability to stimulate proliferation and/or cytokine production by T cell clones generated from humans of various HLA types, from the lymph nodes, spleens, or peripheral blood lymphocytes of C3H or other laboratory mice, or from domestic animals. Compositions comprising multiple T cell epitopes recognized by individuals with different Class II antigens are useful for prevention and treatment of human granulocytic ehrlichiosis in a broad spectrum of patients .
In a preferred embodiment of the present invention, an aoHGE polypeptide containing a B cell epitope is fused to one or more other immunogenic aoHGE polypeptides containing strong T cell epitopes. The fusion protein that carries both strong T cell and B cell epitopes is able to participate in elicitation of a high titer antibody response effective to neutralize infection with aoHGE. Strong T cell epitopes may also be provided by non-aoHGE molecules. For example, strong T cell epitopes have been observed in hepatitis B virus core antigen (HBcAg) . Furthermore, it has been shown that linkage of one of these segments to segments of the surface antigen of Hepatitis B virus, which are poorly recognized by T cells, results in a major amplification of the anti-HBV surface antigen response, [D.R. Milich et al., "Antibody Production To The Nucleocapsid And Envelope Of The Hepatitis B Virus Primed By A Single Synthetic T Cell Site", Nature. 329, pp. 547-49 (1987) ] .
Therefore, in yet another preferred embodiment, B cell epitopes of the aoHGE polypeptides are fused to segments of HBcAG or to other antigens which contain strong T cell epitopes, to produce a fusion protein that can elicit a high titer antibody response against aoHGE. In addition, it may be particularly advantageous to link an aoHGE polypeptide of this invention to a strong immunogen that is also widely recognized, for example tetanus toxoid.
It will be readily appreciated by one of ordinary skill in the art that the aoHGE polypeptides of this invention, as well as fusion proteins and multimeric proteins containing them, may be prepared by recombinant means, chemical means, or combinations thereof. For example, the polypeptides may be generated by recombinant means using the DNA sequences of aoHGE isolate NCH-1 as set forth in the sequence listings contained herein. DNA encoding serotypic variants of the polypeptides may likewise be cloned, e.g., using PCR and oligonucleotide primers derived from the sequences herein disclosed.
In this regard, it may be particularly desirable to isolate the genes encoding aoHGE polypeptides from isolates that differ antigenically from strain NCH-1, i.e., aoHGE isolates against which aoHGE NCH-1 polypeptides are ineffective to protect, in order to obtain a broad spectrum of different epitopes which would be useful in the methods and compositions of this invention. Oligonucleotide primers and other nucleic acid probes derived from the genes encoding the aoHGE polypeptides of this invention may also be used to isolate and clone other related proteins from aoHGE an.' related rickettsia which may contain regions of DNA sequence homologous to the DNA sequences of this invention. In addition, the DNA sequences of this invention may also be used in PCR reactions to detect the presence of aoHGE in a suspected infected sample. If the aoHGE polypeptides of this invention are produced recombinantly, they may be expressed in unicellular hosts. As is well known to one of skill in the art, in order to obtain high expression levels of foreign DNA sequences m a host, the sequences are generally operatively linked to transcriptional and translational expression control sequences that are functional in the chosen host. Preferably, the expression control sequences, and the gene of interest, will be contained in an expression vector that further comprises a selection marker.
The DNA sequences encoding the polypeptides of this invention may or may not encode a signal sequence. If the expression host is eukaryotic, it generally is preferred that a signal sequence be encoded so that the mature protein is secreted from the eukaryotic host. An ammo terminal methionine may or may not be present on the expressed polypeptides of this invention. f Lue terminal methionine is not cleaved by the expression host, it may, if desired, be chemically removed by standard techniques. A wide variety of expression host/vector combinations may be employed in expressing the DNA sequences of this invention. Useful expression vectors for eukaryotic hosts, include, for example, vectors comprising expression control sequences from SV40, bovme papilloma virus, adenovirus, adeno-associated virus, cytomegalovirus and retroviruses including lentiviruses . Useful expression vectors for bacterial hosts include bacterial plasmids, such as those from E. coli , including pBluescπpt, pGEX-2T, pUC vectors, col El, pCRl, pBR322, pMB9 and their derivatives, pET- 15, wider host range plasmids, such as RP4, phage DNAs, e.g., the numerous derivatives of phage lambda, e.g. λGTIO and λGTll, and other phages . Useful expression vectors for yeast cells include the 2μ plasmid and derivatives thereof. Useful vectors for insect cells include pVL 941. In addition, any of a wide variety of expression control sequences -- sequences that control the expression of a DNA sequence when operatively linked to it — may be used in these vectors to express the DNA sequences of this invention. Such useful expression control sequences include the expression control sequences associated with structural genes of the foregoing expression vectors. Examples of useful expression control sequences include, for example, the early and late promoters of SV40 or adenovirus, the lac system, the trp system, the TAC or TRC system, the T3 and T7 promoters, the major operator and promoter regions of phage lambda, the control regions of fd coat protein, the promoter for 3-phosphoglycerate k ase or other glycolytic enzymes, the promoters of acid phosphatase, e.g., Pho5, the promoters of the yeast α- matmg system and other constitutive and mducible promoter sequences known to control the expression of genes of prokaryotic or eukaryotic cells or their viruses, and various combinations thereof. In a preferred embodiment, DNA sequences encoding the aoHGE polypeptides of this invention are cloned in the expression vector lambda ZAP II (Stratagene, La Jolla, CA) , in which expression from the lac promoter may be induced by IPTG.
In another preferred embodiment, DNA encoding the aoHGE polypeptides of this invention is inserted in frame into an expression vector that allows high level expression of the polypeptide as a glutathione S- transferase fusion protein. Such a fusion protein thus contains amino acids encoded by the vector sequences as well as amino acids of the aoHGE polypeptide. A wide variety of unicellular host cells are useful in expressing the DNA sequences of this invention. These hosts may include well known eukaryotic and prokaryotic hosts, such as strains of E. coli , Pseudomonas, Bacill us, Streptomyces, fungi, yeast, insect cells such as Spodoptera frugiperda (SF9) , animal cells such as CHO and mouse cells, African green monkey cells such as COS 1 , COS 7, BSC 1, BSC 40, and BMT 10, and human cells, as well as plant cells . It should of course be understood that not all vectors and expression control sequences will function equally well zo eλpress the DNA sequences of this invention. Neither will all hosts function equally well with the same expression system. However, one of skill in the art may make a selection among these vectors, expression control sequences and hosts without undue experimentation and without departing from the scope of this invention. For example, in selecting a vector, the host must be considered because the vector must be replicated in it. The vector's copy number, the ability to control that copy number, the ability to control integration, if any, and the expression of any other proteins encoded by the vector, such as antibiotic or other selection markers, should also be considered.
In selecting an expression control sequence, a variety of factors should also be considered. These include, for example, the relative strength of the promoter sequence, its controllability, and its compatibility with the DNA sequence of this invention, particularly with regard to potential secondary structures. Unicellular hosts should be selected by consideration of their compatibility with the chosen vector, the toxicity of the product coded for by the DNA sequences of this invention, their secretion characteristics, their ability to fold the polypeptide correctly, their fermentation or culture requirements, and the ease of purification from them of the products coded for by the DNA sequences of this invention.
Within these parameters, one of skill in the art may select various vector/expression control sequence/host combinations that will express the DNA sequences of this invention on fermentation or in other large scale cultures.
The molecules comprising the aoHGE polypeptides encoded by the DNA sequences of this invention may be isolated from the fermentation or cell culture and purified using any of a variety of conventional methods including: liquid chromatography such as normal or reversed phase, using HPLC, FPLC and the like; affinity chromatography (such as with inorganic ligands or monoclonal antibodies) ; size exclusion chromatography; immobilized metal chelate chromatography; gel electrophoresis ; and the like. One of skill in the art may select the most appropriate isolation and purification techniques without departing from the scope of this invention.
In addition, the aoHGE polypeptides may be generated by any of several chemical techniques. For example, they may be prepared using the solid-phase synthetic technique originally described by R. B. Merπfield, "Solid Phase Peptide Synthesis. I. The Synthesis Of A Tetrapeptide", J. Am. Chem. Soc. 83, pp. 2149-54 (1963) , or they may be prepared by synthesis in solution. A summary of peptide synthesis techniques may be found in E. Gross & H. J. Memhofer, 4 The Peptides : Analysis, Synthesis, Biol ogy; Modern Techniques Of Peptide And Ammo Acid Analysi s, John Wiley & Sons, (1981) and M. Bodanszky, Principles Of Peptide Synthesis, Spπnger-Verlag (1984).
Typically, these synthetic methods comprise the sequential addition of one or more ammo acid residues to a growing peptide chain. Often peptide coupling agents are used to facilitate this reaction. For a recitation of peptide coupling agents suitable for the uses described herein see M. Bodansky, supra . Normally, either the ammo or carboxyl group of the first ammo acid residue is protected by a suitable, selectively removable protecting group. A different protecting group is utilized for ammo acids containing a reactive side g^oup, e.g., lysine. A variety of protecting groups known m the field of peptide synthesis and recognized by conventional abbreviations therein, may be found in T. Greene, Protective Groups In Organi c Synthesi s, Academic Press (1981). According to another embodiment of this invention, antibodies directed against the aoHGE polypeptides are generated. Such antibodies are immunoglobulin molecules or portions thereof that are immunologically reactive with an aoHGE polypeptide of the present invention. It should be understood that the antibodies of this invention include antibodies immunologically reactive with fusion proteins and multimeric proteins comprising an aoHGE polypeptide. Antibodies directed against an aoHGE polypeptide may be generated by a variety of means including infection of a mammalian host with aoHGE, or by immunization of a mammalian host with an aoHGE polypeptide of the present invention. Such antibodies may be polyclonal or monoclonal, it is preferred that they are monoclonal. Methods to produce polyclonal and monoclonal antibodies are well known to those of skill in the art. For a review of such methods, see Antibodi es , A Labora tory Manual , supra , and D.E. Yelton, et al . , Ann. Rev, of Biochem., 50, pp. 657-80 (1981). Determination of lmmunoreactivity with an aoHGE polypeptide of this invention may be made by any of several methods well known in the art, including by immunoblot assay and ELISA. An antibody of this invention may also be a hybrid molecule formed from immunoglobulin sequences from different species (e.g., mouse and human ) or from portions of immunoglobulin light and heavy chain sequences from the same species. It may be a molecule that has multiple binding specificities, such as a bifunctional antibody prepared by any one of a number of techniques known to those of skill the art mcluding: the proc^c. ~ disulfide exchange; :~ = ~_ca_ peptide linkers bet ee :Λc introduction of two s-~ :: light chains into human monoclonal an:. _-Ξ several methods know- ie monoclonal antibodies , oc human cells, by SCID- ~ιce capable of producing ' -a-" expression of clonec ~a _- phage-display, or b otr "n additi - ^a the antibodies of t - τe- diphtheria, pseudomc <c gelonin, etc., or an: :_ tetracyclmes and c _^ ~c~-
Ir sum, one = ._ with the teachings c" __ _ variety of methods Λ biological properties invention including -~- decrease the stability toxicity, affinity cr molecule, or to alter render it more s ::c_
One of s antibodies directeα •=_ have utility m ther=. compositions and re: granulocytic e r..: example, the level of aoHGE in infected ticks may be decreased by allowing them to feed on the blood of animals immunized with the aoHGE polypeptides of th.._ invention. The antibodies of this invention also hav- variety of other uses. For example, they are use- reagents to screen for expression of the aoHGE polypeptides, either in libraries constructed from aoHGE DNA or from other samples in which the protei- may be present. Moreover, by virtue of their speci: binding affinities, the antibodies of this mventio- are also useful to purify or remove polypeptides frc- given sample, to block or bind to specific epitopes z - the polypeptides and to direct various molecules, sue as toxins, to the surface of aoHGE .
To screen the aoHGE polypeptides and antibodies of this invention for their ability to confer protection against human granulocytic ehrlichiosis or their ability to lessen the severity aoHGE infection, laboratory mice are preferred as ar animal model. Of course, while any animal that is susceptible to infection with aoHGE nay be useful, mice are not only susceptible to aoHGE infection but are also afflicted with clinical symptoms of a dιsea_ that is remarkably similar to human granulocytic ehrlichiosis in humans. Further, the humoral resDO" of mice infected with aoHGE by tick transmission has been shown to be strongly similar to the human hjrc response. Thus, by administering a particular ao-CI polypeptide or anti-aohGE polypeptide antibody tc ~_ one of skill m the art may determine without ^ α-e experimentation whether that or a^t-c.^ would be useful impositions claimed herein.
The aαr aoHGE polypeptide or antibody of t' e animal may be accomplished by .- = ~sed herein or by a variety of _ _ res. For a detailed discuss:;- : _es, see Antibodi es, A Labora tory Man ^ - , r./, if a polypeptide is use:, . _::ere with a pharmaceutically c z z z _, 3 z.c as complete or incomplete Fre„::' I muramyl dipeptides) or IΞ3I ~.g complexes ) . Such adjuvants ma ;p:ι e from rapid dispersal by sea::a-. deposit, or they may contain ≤_: .mulate the host to secrete factors tr.a: ; for macrophages and other componer.:: :/stem. Preferably, if a polypeptide _: c- :e , the immunization sche:_-~ .. :r more administrations cf ~ " :cread out over several weeks.
Once _ e - - D or antibodies of this invention have : - to e effective in the screening prc:^. : e used in a therapeutically erf-: pharmaceutical compositions and ~-_ prevent human granulocytic ehrl_~ invention may be _ "er.tional depot forms. These inc. t-iα, semi-solid and liquid αcsa - _ _ , ^-- J.1 b , powders, iiquiα ~ - - , -posomes, cap:-. -, suppositories, injectable and infusible sc_.tιor.s . The preferred form depends upon the intended mode of administration and prophylactic app - _catιon. Such dosage forms may include ,:e_ιtιcally acceptable carriers and adjuvants : . . are known to those of skill in the art. These carriers and adjuvants include, for example, RIBI, I Ξ , ion exchangers, alumina, aluminum stearate, 1 tnin, serum proteins, such as human serum albumin, b„::er substances, such as phosphates, glycine, sorbic a:. :, potassium sorbate, partial glyceride mixtures of ε- : = :- -. eietable fatty acids, water, salts or e_ trcyt s such as protamine sulfate, disodium hyirogeπ phosphate, sodium chloride, zinc salts, colloidal silica, magnesium trisilicate, polyvinyl pyr roiidone, cellulose-based substances, and polyethylene glycol. Adjuvants for topical or gel base fcrr.s may be selected from the group consisting of soα-:nα carboxymethylcellulose, polyacrylates, pc-_. oxyethylene-polyoxypropylene-block polymers, pc_.ethyiene glycol, and wood wax alcohols.
The vaccines and compositions of this invention may also include other components or be s c:e:t to other treatments during preparation to er.r.ar.oe their immunogenic character or to improve their tc_ .ra ee in patients.
Compositions comprising an antibody of this in .::::: may be administered by a. variety of dosage ::. - and regimens similar to those used for other p . . :z irrmunotherapies and well known to those of
-n :he art. Generally, the aoHGE polypeptides may be formulated and administered to the patient using methods and compositions similar to those employed for other pharmaceutically important polypeptides (e.g., the vaccine against hepatitis) . Any pharmaceutically acceptable dosage route, including parenteral, intravenous, intramuscular, mtralesional or subcutaneous injection, may be used to administer the polypeptide or antibody composition. For example, the composition may be administered to the patient in any pharmaceutically acceptable dosage form including those which may be administered to a patient intravenously as bolus or by continued infusion over a period of hours, days, weeks or months, intramuscularly -- including paravertebrally and periarticularly — subcutaneously, intracutaneously, mtra-articularly, trasynovially, mtrathecally, mtralesionally, periostally or by oral or topical routes. Preferably, the compositions of the invention are in the form of a unit dose and will usually be administered to the patient intramuscularly.
The aoHGE polypeptides or antibodies of this invention may be administered to the patient at one time or over a series of treatments. The most effective mode of administration and dosage regimen will depend upon the level of lmmunogenicity, the particular composition and/or adjuvant used for treatment, the severity and course of the expected infection, previous therapy, the patient's health status and response to immunization, and the judgment of the treating physician.
For example, in an immunocoπDetent patient, the more highly immunogenic the polypeptide, the lower ~αor of immunizations, ecessary treatment time will αe -5 administered with an osa Λ'lli consist of 10 μg - . -y eptide, and preferably, -1000 μg. Generally, the ce 0.5 mg-3.0 g. nodiment of this invention, mmistereα with an adjuvant, munogenicity. Useful I5C0M, simple metal salts ~α oil based adjuvants - "round's adjuvant. -s ea, the polypeptide -Ision with the
In yet another c referred embodiment, E. coli excressmg proteins corner- :_ng an aoriGE polypeptide are administered orally to nc-"-man -nimals according to "etnoαs -nnown _n tne art, decrease or lessen the :e'er-ty of ao-'CΞ infect- Fir example, a palatable re:. er. of oa::erιa expre" _ng an aoHGE polypeptide, a-ine or -n ::e form of a --5 ion protein or multimeric protein, may oe aomm_ste: - .Mtn animal food to be oon:-meα cy Λ__α mice or "er animals that harbor
In:e::_tn of 5- . aooeria may induce an -----: resco-: ::r r. = . :n :-mo al and cell-
~- -a:e: torn: :-:=. Z -- Z . _aαoff et al., "Oral
.-_-.-:--- "."" - -™ .r_ -~ ."9 Expressing
-_ι . . -. :--- ~e::~ Against Malaria", , , . - -id K.S. Kim et al., "Immunization Cf .s itn Live Escheri chia coli Expressing Eimer ' iir.a Merozoite Recombinant Antigen Induces Protection Against Coccidiosis", I- ,., 5~ , pp. 2434-40 (1989); M.
Dunne et al., " mat Against Human granulocytic er.r.: 5 "J Sz l. .onella Expressing OspA, " Inf. ana m: 63:l ll .995); E. Fikrig et al., "Protection o z y Lyme Borreliosis By Oral Vaccination With Ξ hi a col i Expressing OspA," J_,_ Infec. Pis.. 164: 91 . Moreover eve- of aoHGE infection in ticks feeding on :. may be lessened or eliminated, thus i: no transmission to the next animal . Accoroir. .ot e: -mbodiment, the antibodies of :;.:.- on as well as the aoHGE polypeptides of :n. .tio.n, and the DNA sequences encoding them are . .5 diagnostic agents for detecting infect::: oHGΞ. The polypeptides are capable of bindm: coαy molecules produced in animals, including tnat are infected with aoHGE, and the an:: are oapabie of binding to aoHGE or an_.ige..s : Such d:a: agents may be included in a kit which may also e instructions for use and other appropriate ; , preferably a means for detecting when tne tioe or antibody is bound. For example, the :e :r antibody may be labeled with a detection m- .: allows for the detection of the polypeptide :•. : ■ z : :n.d to an antibody, or for the detection of ; -.nen it is bound to aoHGE or an antigen ::. The detection means may be a fluorescent labeling agent such as fluorescem isocyanate (FIC) , fluorescein isothiocyanate (FITC) , and the like, an enzyme, such as horseradish peroxidase (HRP) , glucose oxidase or the like, a radioactive element such as 125I or Cr that produces gamma ray emissions, or a radioactive element that emits positrons which produce gamma rays upon encounters with electrons present in the test solution, such as C, 0, or N. Binding may also be detected by other methods, for example via avid -biotm complexes.
The linking of the detection means is well known in the art. For instance, monoclonal antibody molecules produced by a hybridoma can be metabolically labeled by incorporation of radioisotope-conta mg ammo acids m the culture medium, or polypeptides may be conjugated or coupled to a detection means through activated functional groups.
The diagnostic kits of the present invention may be used to detect the presence of a quantity of aoHGE or anti-aoHGE antibodies a oody fluid sample such as serum, plasma or urine. Thus, in preferred embodiments, an aoHGE polypeptide or an antibody of the present invention is bound to a solid support typically by adsorption from an aqueous medium. Useful solid matrices are well known in the art, and include crosslmked dextran; agarose; polystyrene; polyvmylchloπde; cross-linked polyacrylamide; nitrocellulose or nylon-based materials; tubes, plates or the wells of microtiter plates. The polypeptides or antibodies of the present invention may be used as diagnostic agents in solution form or as a substantially dry powder, e.g., in lyophilized form. aoHGE polypeptides and antibodies directed against those polypeptides provide much more specific diagnostic reagents than whole aoHGE and thus may alleviate such pitfalls as false positive and false negative results.
In particular, one of skill in the art would understand that aoHGE polypeptides of this invention that are selectively expressed in the infected host and not in cultured aoHGE, and antibodies directed against such polypeptides, allow detection of antigens and antibodies m samples that are undetectable by diagnostic methods using lysates of cultured spirochetes as the antigen.
One skilled m the art will realize that it may also be advantageous in the preparation of detection reagents to utilize epitopes from more than one aoHGE protein and antibodies directed against such epitopes. It may be particularly advantageous to use epitopes of aoHGE polypeptides that elicit antibodies early in aoHGE infection m combination with epitopes from other aoHGE polypeptides that elicit antibodies that occur m the later stages of human granulocytic ehrlichiosis. Diagnostic reagents containing multiple epitopes which are reactive with antibodies appearing at different are useful to detect the presence of anti-aoHGE antibodies throughout the course of infection and to diagnose human granulocytic ehrlichiosis at all stages.
The skilled artisan also will realize that it may be advantageous to prepare a diagnostic kit comprising diagnostic reagents to detect aoHGE as well as other pathogens found in the same tick vector, for example, Borrelia burgdorferi and Babesia mi croti , and instructions for their use. The polypeptides and antibodies of the present invention, and compositions and methods comprising them, may also be useful for detection, prevention, and treatment of other infections caused by πckettsia which may contain surface proteins sharing ammo acid sequence or conformational similarities with the aoHGE polypeptides of the present invention, for example, Ehrlichia equi and Ehrli chia phagocytophila . In order that this invention may be better understood, the following examples are set forth. These examples are for purposes of illustration only, and are not to be construed as limiting the scope of the invention in any manner.
Example I - Development of an Animal Model for HGE
We established the laboratory mouse as an animal model in which to investigate the pathogenesis of HGE and to screen the aoHGE polypeptides and antibodies of the present invention for their ability to elicit an immune response effective to treat or protect against aoHGE infection and/or human granulocytic ehrlichiosis. We chose to use mice because of the extensive lmmunologic, biologic and genetic parameters available for manipulation.
We examined the susceptibility of various strains of mice to infection with the NCH-1 isolate of the HGE agent. We inoculated the mice via tick-borne infection or syringe oculatin by several different routes. [S.W. Barthold et al . , J. Inf .Pis. , (in press).] We chose mice having maximum genetic disparity and representing different H-2 haplotypes. The mice used for these studies included C3H/HeJ, C3H/HeN and C3H/Smn.CIcrHsd/scιd mice, purchased from the Jackson Laboratory (Bar Harbor, ME.), NCI Animal Production Program, Frederick Cancer Research Center (Fedeπck, MD) , and Harlan Sprague Dawley, Inc. (Indianapolis,
IN), respectively. Pregnant outbred Crl : CD-I ( ICR) mice were purchased from Charles River Breeding Laboratories (Wilmington, MA) .
To examine the course of tick-borne aoHGE infection, we placed 5 aoHGE-mfected nymphal ticks on naive C3H mice and allowed them to feed to repletion. All of the mice became infected, having visible morulae in peripheral blood smears at 5-10 days after tick feeding. We necropsied 4 mice with verified infection and 4 age-matched control mice at days 5, 10, 17 and 24 after tick feeding.
All infected mice exhibited transient splenomegaly and we were able to culture aoHGE from peripheral blood and spleen from all mice on days 17 and 24. All infected mice also developed detectable antibodies to aoHGE by day 10.
Infected mice developed transient hematologic aberrations similar to those described in human HGE including leukopenia, with a reduction in total leukocytes, granulocytes and lymphocytes, and anemia. Morulae were found only granulocytes. At all time points, there was marked hematopoiesis in spleens and bone marrow of all infected mice and the lungs of most infected mice showed perivascular lymphoid nodules indicative of antigenic stimulation.
To assess the susceptibility of mice to syringe inoculation, we inoculated 3-5 week old mice both intraperitoneally and subcutaneously with 0.1 ml of serial dilutions (undiluted, 1:10, 1:100 and 1:000) of blood from aoHGE-mfected SCID mice (10% granulocytes with morulae) . We collected blood from the mice on days 7, 14, 17 and 21 after inoculation and examined peripheral blood smears for morulae to establish aoHGE infection. Mice inoculated by both routes became infected, although they appeared to be more susceptible to infection by l.p. inoculation. Xenodiagnosis (occurrence of aoHGE infection in unmfected ticks which feed on infected mice) demonstrated that mice remained persistently infected for up to 55 days.
In a separate experiment, we necropsied mice infected with aoHGE by syringe inoculation at days 5, 10, 30 and 60 after inoculation. We assessed infection by visualization of morulae, culture, PCR and mouse mfectivity at each time point. All of the mice remained infected at 30 days. At 60 days, no infection was detectable by the morulae, PCR or culture assays. However, one mouse remained infected at 60 days, based on a mouse mfectivity assay. The results of these studies showed that mice, upon tick or syringe inoculation, become infected and develop clinical symptoms of a disease that is remarkably similar to HGE humans. Mice remained persistently infected for at least 55 days after inoculation, and had a 100% correlation between infection, seroconversion, and disease. We therefore chose the laboratory mouse as our animal model for HGE in humans because it is a fully immunocompetent adult host that 1) is susceptible to aoHGE infection with small numbers of organisms, 2) develops persistent infection and 3) develops a 100% incidence of hematological symptoms of HGE.
Example II - Infant Mouse Infectivitv Assay
Based on our observation that the mouse mfectivity assay appeared to be the most sensitive assay for detecting the presence of infectious aoHGE, we compared the sensitivity of the assay in mice of various ages. We inoculated groups of 4-5 mice at 1 day, 3 days , 5 days, 1 week and 3 weeks of age by l.p. injection with 0.1 ml of infected SCID mouse blood and assessed infection by hematocrit, spleen weight, morulae and PCR at 10 days after inoculation. e α.:covered that mice moculated at 1 day and 3 days had a significantly higher percent of granulocytes with morulae than older mice. All infected mice had increased spleen weights. We next assessed the sensitivity of our infant mouse mfectivity assay. We inoculated groups of 4 one day old mice l.p. with serial dilutions (undiluted, 1:10 and 1:100) of infected SCID mouse blood. Mice became infected at all inoculum doses as determined by increased spleen weight and visualization of morulae. Based on our results, our infant mouse mfectivity assay is significantly more sensitive than the currently used assays for diagnosing aoHGE infection.
Example III - Isolation and Sequencing of
Immunogenic aoHGE Polypeptides
To identify aoHGE polypeptides that elicit a humoral response in an infected animal, including humans, we probed lysates of aoHGE-infected HL-60 cells with sera from patients infected with aoHGE and from mice experimentally infected with aoHGE .
A. Preparation of aoHGE-infected HL-60 Cells
We grew aoHGE isolate NCH-1 in HL-60 cells according to the previously published methods of Goodman et al., with some modifications [J.L. Goodman et al., "Direct Cultivation of the Causative Agent of Human Granulocytic Ehrlichiosis," N. Engl . J. Med. , 334, pp. 209-215 (1996) ] .
Briefly, we cultured HL-60 cells (American Type Culture Collection 240-CCL) in Iscove's modified Dulbecco's medium supplemented with 20% fetal bovme serum, with no added antibiotic, maintained at 37°C with 5% carbon dioxide.
We inoculated 10 ml HL-60 cells grown to a density of 1 x 107 cells per ml in 70 ml culture flasks with 50μl blood or splenic tissue from mice infected with aoHGE isolate NCH-1. We maintained cell density between 5 x 10s and 1.5 x 107 cells per ml by feeding the cells twice a week. Usually we removed and discarded 5 ml of the culture and added an equal amount of fresh medium. If the cell count was below 5 x 10 per ml, we added fresh HL-60 cells to a final concentration of 1 x 106. We confirmed infection of the HL-60 cells by light microscopy of cultured cells stained with DiffQuick (Baxter, Miami, FL) . B. Patient Sera
We obtained sera from aoHGE patients from L. Magnarelli at the Connecticut Agricultural Experimental Station and S. Telford at Harvard. We obtained 26 convalescent and/or acute serum samples from 18 patients with confirmed aoHGE infection based on the identification of granulocytic morulae in the peripheral blood smear. All patients had fever, headache, malaise and leukopenia and/or thrombocytopenia with or without anemia. In most cases, the human aoHGE sera were obtained 2-8 weeks after the diagnosis of infection. C. Mouse Sera
We prepared anti-aoHGE antiserum as follows. We inoculated naive mice intraperitoneally with peripheral blood from an aoHGE patient. We allowed uninfected J. scapul ari s ticks (S. Telford, Harvard School of Tropical Public Health, Cambridge, MA) to feed to rep-.et.Lwn on infected mice. We placed engorged ticks in mesh-covered vials containing moist plaster of Paris and held them at room temperature until molting into nymphs as described [S.R. Telford et al., "Perpetuation Of The Agent Of Human Granulocytic Ehrlichiosis In A Deer Tick-Rodent Cycle," Proc . Na tl . Acad. Sci . USA, 93, pp.6209-6214 (1996)]. We infected three to four week old random sex
C3H specific pathogen free mice (Jackson Laboratories, Bar Harbor, ME) by placing five hardened nymphs on each mouse and allowing the ticks to feed to repletion. We made daily blood smears for 1 week starting on day five after the ticks had engorged. All mice had verified granulocytic morulae in one or more of the daily blood smears at 5-10 days after tick feeding.
We were able to culture aoHGE in HL-60 cells inoculated as described supra with peripheral blood and pooled splenic homogenates from infected mice at 17 and 24 days after infection. We obtained serum 10, 17 and 24 days after tick feeding.
Those of skill in the art will understand that anti-serum to other isolates of aoHGE, such as the Yale isolate, R01, the Minnesota isolate, or other isolates, may be prepared in the same way. D. Immunoblot Analysis
We prepared lysates for immunoblotting as follows. We pelleted HL-60 cells infected with aoHGE isolate NCH-1 at 2000 rpm and washed twice in PBS. We resuspended the washed cells at one tenth of the original volume, heated to 100°C for 5 min., mixed with loading buffer and placed the cells on a 10% SDS- polyacrylamide minigel (Hoeffer) . We loaded 25 μg of total protein in each lane.
We separated the proteins by electrophoresis and transferred to nitrocellulose. We blocked the strips with 5% dry milk for 1 hour and incubated with a 1:100 dilution of the patient sera (1:500 for mouse sera) for 1 hr . We detected bound antibody using alkaline phosphatase-conjugated F(ab')2 anti-human or anti-mouse immunoglobulin M or G (Sigma) as secondary antibodies and NBT-BCIP. We used lysates of uninfected HL-60 cells, prepared in an identical fashion as a control. As an additional control, we probed lysates of uninfected and aoHGE NCH-1-mfected HL-60 cells with sera from volunteers who did not have aoHGE infection.
As shown in Figure 9, antibodies m the human anti-aoHGE antisera reacted with aoHGE proteins having molecular weights of 40, 44, 65, 80, 94, 105, 110, 115 and 125 kDa. The murine sera additionally reacted with aoHGE proteins with molecular weights of 25, 34 and 35 kDa and proteins with molecular weights between 40 and 44 kDa. Sera from mice infected by tick bite, but not sera from mice infected by syringe, reacted with an 80 kDa aoHGE protein.
Example IV - Characterization of aoHGE Proteins
To characterize the immunogenic aoHGE proteins that are recognized by antibodies in sera of aoHGE infected individuals, we sequenced proteins identified in lmmunoblots conducted as described m Example III.
To perform the protein sequencing, first we purified aoHGE from infected HL-60 cells prepared as described in Example III, as follows. We purified the aoHGE by renografin density gradient centπfugation as described by Hanson et al . , with some modifications [B.A. Hanson et al . , "Some Characteristics of Heavy and Light Bands of Ri cke t tsi a prowa zekn on Renografin Gradients," Infect. Immun . , 34, pp. 596-604 (1981); S.M. Chen et al., "Identification of the Antigenic Constituents of Ehrli chia chaff eensis, " Am. J. Trop. Med. Hyg. , 50, pp. 52- 58 (1994)].
Briefly, we cultured aoHGE (NCH-1 isolate) in HL-60 cells, centπfuged 1000 ml of aoHGE-mfected HL- 60 cells (at least 70% infected cells) at 1500 rpm for 10 mm. and resuspended PBS-glucose (0.02%) and centπfuged again using the same conditions.
We lysed the HL-60 cells by shearing with a 21-gauge needle, pelleted the cellular debris at 2000 rpm for 10 mm., collected the supernatant and incubated it with RNase and DNase (final concentration 50 μg/ml) to remove any human DNA. Using 42% and 30% discontinuous renografin gradient (Hypaque 76, Nycomed Inc., N.Y.), we ultracentrifuged at 22,000 rpm for 75 mm. at 4°C in a swing bucket rotor (Beckman, Fullerton, CA) . We collected aoHGE in a band at he 30% and 42% renografin interface. We collected the interface band in a sterile pipette and dissolved in SPGN (7.5% sucrose, 3.7 mM KH2PO„ and 5 mM l-glutamme), pelleted at 13,000 rpm and resuspended SPGN at a concentration of 2 μg/μl . We stored the suspension at -70°C.
The critical steps were adequate lysis of the HL-60 cells while leaving the aoHGE cells intact so that subsequent incubation with excess RNase and DNase (to eliminate HL-60 RNA and DNA) does not affect the aoHGE.
We isolated aoHGE proteins as a single band on SDS-polyacrylamide gels as previously described [J. Sambrook et al., Molecular Cloninσ: A Laboratory Manual, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y. (1989), p. 18.60 ff.].
Briefly, we dissolved the purified aoHGE in sample buffer (5% 2-mercaptoethanol, 10% glycerol, 2% SDS and 0.8% bromophenol blue in 6,25 mM Tris buffer, pH 6.8) and heated for 10 mins . at 100°C. We electrophoresed 20 μg per lane of pure aoHGE with molecular mass standards (Bio-Rad Laboratories, Hercules, CA) and stained with Comassie Blue. We isolated by excision the 80-kDa band for automated ammo-termmal peptide sequencing by high performance liquid chromatography (HPLC) at the Yale Protein Purification and Analysis Facility. The N- terminal amino acid sequence of the 80-kDa protein, which we designated the 80-1 polypeptide, is set forth in SEQ ID NO: 7. We conducted a search of GenBank with the Genetics Computer Group Program (University of Wisconsin Biotechnology Center, Madison, WI). Our search revealed that the 80-kDa aoHGE polypeptide is most likely a member of the HSP-70 heat shock protein family. The N-termmal ammo acid sequence is homologous with the N-termmal sequences of B . burgdorferi , E. coli (ECPNAK) , and human (HSHSP70) heat shock protein 70. The most closely homologous protein identified in the database is the B . burgdorferi HSP- 70.
We also isolated by excision the 44-kDa band. Our attempts to sequence the ammo-termmal peptide were unsuccessful, suggesting that the ammo-termmal may be blocked. To circumvent this problem, we generated internal fragments of the 44-kDa aoHGE protein by trypsin digestion. The ammo acid sequence of one fragment, designated the 44-1 polypeptide, is set forth in SEQ ID NO: 5. We designated a second fragment of the 44 kDa aoHGE NCH-1 protein as the 44-2 polypeptide. The ammo acid sequence of the 44-2 polypeptide is set forth in SEQ ID NO: 6. Figure 6 illustrates the
A search of the Genbank Database revealed that the 44-1 polypeptide is approximately 70% homologous with a region from ammo acid 130-138 of the major surface protein 2 (MSP-2) of Anaplasma margmal e . The 44-2 polypeptide is homologous with a region of MSP-2 from ammo acid 362-372. The MSP-2 protein is encoded by a gene which is one member of a large family of genes with a high degree of homology m A. margmal e genome. A. margmale is an important veterinary erythroparasitic pathogen and MSP-2 may confer protection against A. margmale infection [G.H. Palmer et al., "The Immunoprotective Anaplasma margmale Major Surface Protein 2 Is Encoded by A Polymorphic Multigene Family," Infec . Immun . , 62, pp. 3808-3816 (1994); G. H. Palmer et al . , "Molecular Basis For Vaccine Development Against Anaplasmosis and Babesiosis," Vet . Parasi tol . , 57, pp. 233-253 (1995)]. Based on its homology with MSP-2, we believe that the 44-kDa aoHGE protein contains protective epitopes.
Those of skill in the art would understand that other aoHGE polypeptides, from the NCH-1 isolate and from other strains of aoHGE, which are useful for the detection, treatment or prevention of human granulocytic ehrlichiosis or for the study of the pathenogenesis of the disease may be isolated and sequenced without undue experimentation according to the methods described herein.
Example V - Isolation of the DNA
Encoding the 44 kDa Protein
To obtain the complete sequence of the 44 kDa aoHGE protein obtained as described in Example IV, and the DNA encoding that protein, we use the ammo acid sequences of the 44-1 and 44-2 aoHGE NCH-1 polypeptide to design synthetic degenerate oligonucleotide primers for PCR amplification of larger regions of the DNA encoding the 44 kDa aoHGE NCH-1 protein from genomic aoHGE DNA.
Those of skill m the art will appreciate that genomic aoHGE DNA may be isolated according to any of a variety of methods known in the art. See, for example, J. Sambrook et al . , supra .
The skilled artisan will further appreciate that PCR amplification of the regions of the DNA encoding the 44 kDa aoHGE polypeptide may be performed by any of a variety of methods known m the art. τhe DfR product may be isolated and purified according to any methods known in the art, for example, isolating the product by agaraose gel electrophoresis and purifying using gene clean (BIO 101) according to the manufacturer's instructions.
Using these amplified products, we screen a genomic or cDNA library of aoHGE DNA to obtain the gene encoding the 44-kDa polypeptide. We then sequence the isolated DNA by any method known the art, for example, the dideoxy chain termination method. Alternatively, synthetic degenerate oligonucleotide primers may be used directly to screen genomic or cDNA libraries of aoHGE.
Those of skill in the art would be able to isolate the DNA encoding other aoHGE polypeptides without undue experimentation using the methods described herein.
Example VI - Identification of Immunodominant aoHGE Polypeptides
To identify immunodominant aoHGE polypeptides, we performed an immunoblot of lysates of aoHGE NCH-1 infected HL-60 cells proteins, prepared as described in Example III, using twenty sera from 13 patients with documented E. chaff eensis infection. Dr. J.G. Olson (CDC, Atlanta, GA) kindly provided the patient sera. None of the E. chaff eensi s sera reacted with the 40, 44, 65 and 80 kDa aoHGE proteins. One sera out of the twenty reacted weakly with the 110 kDa aoHGE protein and another was reactive with a 120-kDa aoHGE protein. In contrast, sera from eighteen patients infected with aoHGE reacted with all the aoHGE proteins. These results suggest that the 40, 44 and 65 kDa aoHGE polypeptides are immunodominant aoHGE polypeptides . We selected E . chaff eensis because it is the causative agent of the other major human ehrlichiosis, human monocytic ehrlichiosis. However, one of skill m the art will understand that antisera from other bacterial infections may also be used. For example, some cross-reactivity between aoHGE antigens and sera from patients with a history of Lyme disease have been reported [G.P. Wormser et al., "False-positive Lyme Disease Serology m Human Granulocytic Ehrlichiosis, " Lancet, 347, pp. 981-982 (1996)].
Those of skill in the art will further understand that other methods well known in the art, such as IFA or ELISA may also be used to identify immunodominant aoHGE proteins and immunodominant regions of aoHGE proteins without undue experimentation using the methods described herein.
Example VII - Construction of An aoHGE
Genomic Expression Library
We constructed an aoHGE genomic DNA expression library Lambda ZAP II (Stratagene) according to previously published methods (La Jolla, CA) [T.T. Lam et al . , Inf. Imrnun.. 62, pp. 290-298 (1994)]. Briefly, we extracted the genomic DNA from the purified aoHGE by phenol/chloroform extraction.
To construct the library, we randomly sheared 50 μg of genomic aoHGE DNA, blunt-ended with SI nuclease, and methylated the EcoRl sites with EcoRl methylase. , then ligated EcoRl linkers to the ends of the DNA molecules, digested with EcoRl and purified the fragments over a sucrose gradient. We isolated fragments of 1 to 9 kb and ligated overnight at 5°C in a 1:1 molar ratio with EcoRl digested, phosphatase treated Lambda ZAP II arms. We plated the packaged DNA with BB4 cells, incubated overnight and isolated the plaques .
Those of skill in the art would understand that aoHGE genomic DNA expression libraries of other isolates of aoHGE may be constructed without undue experimentation according the methods described herein. A. Screening of the Expression Library
We screened the expression library with serum from mice and humans infected with aoHGE to identify genes encoding aoHGE antigens that elicit antibody responses m both humans and mice. Such antigens are potentially useful as diagnostic reagents and m vaccines . To screen the library, we used the picoBlue
Immunoscreenmg Kit (Stratagene) . We induced protein production from the recombinant plaques with lOmM IPTG and transferred the proteins to duplicate plaque lifts on nitrocellulose filters according to methods well known in the art.
We incubated one set of plaque lifts with the human serum from a patient admitted to the Yale-New Haven Hospital and diagnosed as having aoHGE infection. We probed the other set with mice antiserum prepared as described Example III. After washing, we incubated the filters with a 1:5000 dilution of alkaline phosphatase-con ugated goat anti-numan or anti-mouse IgG antibody (Organon Teknika Corp., West Chester, PA), and used nitro blue tetrazolium (NBT) (Stratagene) and 5-bromo-4-chloro-3-mdolyl phosphate (BCIP)
(Stratagene) for color development. We identified seven clones that reacted with both human and mouse aoHGE antisera for further study.
We also screened the aoHGE expression library with sera from mice hyperimmunized with purified heat- killed aoHGE, prepared as described Example III. We identified two additional clones, which we designated clone eM3 and clone eM4.
Example VIII - Cloning of Immunogenic aoHGE Genes Screening of an aoHGE NCH-1 genomic expression library, prepared as described in Example VII, revealed seven clones that reacted with human and mouse antisera.
We excised the pBluescript plasmid from two of the clones, clones E6 and E7, by infection of XL1- Blue E. coli cells and rescued with R408 helper phage according to the manufacturer's instructions. Using the recovered plasmid, we used T3 and T7 universal primers to obtain initial sequences of the plasmids. From that initial sequence of 100-300 bp, we made new primers which we used to extend the sequences 100-300 bp at a time until we obtained the entire sequence.
Alternatively, one of skill in the art could readily generate a nested set of deletions in the DNA insert with the Erase-A-Base System (Promega, Madison, WI) (e.g., using Smal to generate the 5' blunt end and BstXI to generate a 3' overhang), and then sequence the subclones using, e.g., the Sequenase Kit (United States Biochemical Corp., Cleveland, OH) and reconstruct the entire sequence using MacVector (International Biotechnology, Inc., New Haven, CT) .
The sequence of the plasmid inserts from clones E6 and E7 were determined by the Yale Protein Purification and Analysis Facility using the Circumvent Thermal Cycle Dideoxy DNA sequencing kit (New England Biolabs) . Conditions for denaturation, annealing and extension were: 94° C for 30 sec, 55° C for 20 sec, and 72° C for 20 sec, respectively.
Analysis of the DNA sequence of the insert from clone E6 revealed that we had isolated a clone containing at least one complete open reading frame. The DNA sequence of clone E6 is set forth in SEQ ID NO: 1. The deduced ammo acid sequence is set forth in SEQ ID NO: 2. We designated the first complete open reading frame " e6" . We designated the protein encoded by the gene "E6".
Similarly, analysis of the DNA sequence of the insert from clone E7 revealed a partial open reading frame having the DNA sequence set forth in SEQ ID NO: 3. The deduced ammo acid sequence is set forth m SEQ ID NO: 4. We designated the partial open reading frame "e7" and the antigen encoded by the gene "E7".
We conducted a search of GenBank (date) with the Genetics Computer Group Program (University of Wisconsin Biotechnology Center, Madison, WI). Our search revealed that we had isolated two novel aoHGE antigens. The sequence of e6 showed some homology with A. margmale MSP-2.
Using the same techniques, we isolated and sequenced the inserts from clones eM3 and eM .
Analysis of the DNA sequence of the insert from clone eM3 revealed that we had isolated a partial reading frame. Using probes derived from the DNA sequence of clone eM3, we isolated a complete open reading frame from the genomic aoHGE library. Analysis of the DNA sequence revealed that it encoded the 44-kDa protein isolated as described in Example IV. Figure 6 illustrates the location of the 44-1 and 44-2 polypeptides. The DNA and amino acid sequences of the 44-kDa protein are set forth in SEQ ID NOS: 10 and 11, respectively. The DNA sequence of clone eM4 is set forth m SEQ ID NO: 12. The deduced ammo acid sequence is set forth in Figure 12.
Using oligonucleotide primers based on the DNA sequence of clone eM3, we amplified 5 additional DNA sequences using aoHGE genomic DNA as the template. Those sequences, which we designated E5-3A, E5-3B, E5- 5A, E5-5B and E5-6, are set forth in Figures 13-17, respectively. We discovered that sequences E5-3B, E5- 5B and E5-6, have regions of substantial homology with regions of the 44-kDa protein. As seen Figures 18- 20, nucleotides 400-600 and 900-1300, approximately, of the 44-kDa protein, define regions of homology among the sequences.
Based on our discovery of these conserved sequences and of the homology between the 44-kDa protein and the MSP-2 protein in A. margmal e, which is encoded by one member of a large family of genes, we believe that we have discovered a novel aoHGE gene family which we have designated the "44-kDa" gene family. The skilled artisan will recognize that, using techniques that are well known m the art, one can readily synthesize probes and primers derived from the sequences disclosed herein and obtain DNA sequences of other cross-hyb_ιdιzιng members of the novel 44-kDa gene family of this invention.
Example IX - Expression of the E6 Polypeptide To express the aoHGE genes of this invention, we utilized the pGEX-2T vector, which is capable of directing expression of cloned inserts as glutathione S-transferase fusion proteins [see J. Sears et al., "Molecular Mapping of OspA-Mediated Immunity to Lyme Borreliosis", J. Immunol. , 147, pp. 1995-2000 (1991)]. The vector also contains a thrombm cleavage site immediately following the GT protein, thus, allowing the recovery of recombinant proteins without the GT fusion partner.
We first used PCR to amplify the e6 gene lacking the sequences encoding the hydrophobic leader peptides. We chose to delete that sequence to ensure that the polypeptide would be expressed as soluble fusion protein rather than as a lipoprotein, which would be anchored to the cell membrane or might aggregate elsewhere in the cell during or after biosynthesis .
To facilitate subclonmg, we amplified the e6 gene using a 5' primer with an additional EcoRl site and a 3* primer with a Xhol site (SEQ ID NOS: 8 and 9).
We used 50 ng of plasmid DNA excised from initial phage colonies using the R408 helper phage as a template for the genes . We performed the PCR for 30 cycles with initial template denaturation at 94°C for 1 mmute, annealing at 55°C for 1 mmute and extension at 72°C for 2 minutes.
We digested the amplified gene products with EcoRI and Xhol and cioned xnto the corresponding sites m the PMX plasmid. We then used the ligation mixture to transform Escheri chi a coli DH5α according to methods well known to those of skill in the art. We isolated colonies containing the recombinant plasmid on Luna broth plates supplemented with ampicillin.
We induced expression of the e6 gene as a glutathione S-transferase fusion protein by growing the transformed bacteria to logarithmic phase and adding 1 mM ιsopropyl-1-thι-beta-galactosιde (IPTG) for 3 hours.
Alternatively, we subclone the aoHGE gene into the pET15b vector, which is capable of directing expression of cloned inserts as fusion proteins with a series of six ammo terminal histidmes.
Alternatively, the skilled artisan will appreciated that the aoHGE polypeptides of this invention may be recombinantly expressed without a fusion partner using techniques well known m the art.
One of skill in the art could readily express the other aoHGE polypeptides of this invention without undue experimentation following the above-described techniques .
Example X - Purification of Recombinant
Fusion Proteins
After inducing protein expression as described m Example IX, we place the E. coli in phosphate buffered saline (PBS) with 1% Triton and subject them to sonication. We purify the glutathione S-transferase-aoHGE polypeptide fusion protein (GT-E6) from cell lysates as follows.
We separate the cell supernatant and pellet by centrifugation at 800 rpm for 8 mins . and pass the supernatant containing the recombinant fusion proteins over a glutathione-Sepharose 4B column (Pharmacia) according to the manufacturer's instructions. We elute the fusion protein from the column using a solution containing excess glutathione and quantify using the Bradford assay. In addition, to purify the aoHGE proteins without the glutathione S-transferase, we load the glutathione S-transferase fusion proteins over the glutathione-Sepharose 4B column, add thrombm to cleave the recombinant aoHGE protein from the GT and incubate overnight at room temperature. We then elute the proteins with 50 mM Trιs-CaCl2 _NaCl, treat the eluent with anti-thrombm beads and centrifuge at 13,000 rpm.
To purify recombinant fusion proteins expressed m the pET15b vector system, we pass the supernatant containing the recombinant fusion proteins over a nickel column and we elute the fusion protein from the column with EDTA.
To purify aoHGE antigens that are not soluble in E. coli , we add SDS up to a concentration of 0.1% to the lysate to enhance solubility.
One of skill m the art would understand that other aoHGE polypeptides of this invention may be readily purified without undue experimentation using these procedures.
Example XI - Preparation Of Antibodies
Directed Against The Recombinant aoHGE Polypeptides Of This Invention
We generate antibodies directed against the aoHGE polypeptides of this invention as follows. We immunize mice (Frederick Cancer Research Center,
Frederick, MD) subcutaneously with the aoHGE fusion protein expressed as described in Example IX in complete Freund's adjuvant (CFA) and boost with the same amount of antigen in incomplete Freund's adjuvant (IFA) at 14 and 28 days according to published protocols. We immunize control mice in the same manner with recombinant glutathione S-transferase.
Fourteen days after the last boost, we collect sera from the immunized animals and use it to hybridize to Western blots of SDS-PAGE gels of recombinant aoHGE polypeptides. We detect antibodies elicited by the recombinant aoHGE polypeptides by lmmunoblottmg and by ELISA.
Alternatively, a skilled artisan will recognize that antibodies directed against aoHGE polypeptides of this invention can be obtained by immunizing mice with cells expressing a DNA sequence encoding an aoHGE polypeptide of this invention.
Example XII - Detection of Anti-aoHGE Polypeptide Antibodies By IFA and ELISA We detected anti-aoHGE antibodies in the plasma of nιc<_ i h tick-oorne aoHGE infection by indirect immunofluorescence assay (IFA) and ELISA as follows .
We collected plasma from mice infected as described in Example III, at days 5, 10, 17 and 24 after tick-feedmg. We then used the plasma in ELISA and indirect immunofluorescence assay (IFA) with aoHGE- mfected HL-60 cells prepared as described supra as antigen. A. I_FA We suspended infected and uninfected (control) HL-60 cells in culture medium, washed 2x in PBS, air-dried and fixed in cold acetone (-20°C for 10 mm.) on 12-well Teflon®-coated multiwell slides (CEL- LINE, Hewfield, NJ) . We placed twenty μl volumes of serial 2-fold dilutions of plasma form individual infected and control mice (starting at 1:40 dilution) m the wells of antigen-coated slides, incubated in humidified chambers at 37°C for 30 mm., washed 3x in PBS, then flooded with fluoresce -conjugated goat anti-mouse polyvalent immunoglobulin (Sigma, St. Louis, MO) at 1:100 dilution. We then incubated, washed, air- dried the slides, coverslipped over PBS-glycerol and examined under a fluorescence microscope. We included negative control antigen (uninfected HL-60 cells) and negative control plasma (uninfected mice) each time we performed the assay. B. ELISA
To detect and quantify the specific IgM and IgG response to aoHGE, we used a modification of a previously described indirect ELISA [Rikihisa, Y. et al . , "Clinical Histopathological and Immunological Responses of Ponies to Ehrli chia sennetsu and Subsequent Ehrlichia ri sticn Challenge," Infect . Immun . , 56: (1988)].
Briefly, we coated duplicate sets of 96-well microtiter plates (corning Glass Works, Corning, NY) with 1 x 104 aoHGE-mfected or uninfected (control) HL- 60 cells. We fixed the plates m 10% neutral buffered formalin, washed with PBS-Tween 20, then blocked for 1 hr. with 200 μl blocking buffer (3% gelatin in PBS, 0.51 Tween 20). We added 100 μl of serial 2-fold dilutions of plasma samples in PBS-1% BSA, starting at 1:80, to each antigen-coated well and incubated for 1 hour at room temperature. We then washed the plates 3 times with PBST and incubated with 100 μl of horseradish peroxidase-conjugated goat anti-mouse polyvalent immunoglobulin (Sigma, St. Louis, MO) diluted 1:12,000 in PBS-1% BSA as above.
Finally, we added the substrate, 0.4% 3, 3 ', 5, 5' -tetramethylbenzidme (TMB) m an organic base and 0.02% hydrogen peroxide in a citric acid buffer
(Kirkegard and Perry Laboratories, Inc., Gaithersburg, mD) to each well, incubated 10 mm. in darkness at 25°C, then stopped the reaction by adding an equal volume of IN HCL. We measured the optical density (OD) of each well at 450 nm with a UV max ELISA reader (Dynatech Laboratories, Alexandria, VA) .
We determined the signal to noise (S/N) ratio and signal minus noise (S - N) value for each dilution of every plasma sample by dividing and subtracting respectively, the OD of the well with infected cells by the OD of the well with uninfected cells. We determined the cut-off point for each dilution by testing normal mouse sera (N=10), and determining means and standard deviations (3 standard deviations above the means). With -test variablility was approximately 15% when different batches of culture were used.
As sκ^wn m Figure 8, we detected anti-aoHGE antibodies in the plasma of aoHGE infected mice by IFA and ELISA as early as 10 days after infection. The response peaked at 17 days and diminished by 24 days.
Example XIII - Active Immunization Of Mice With E. coli Expressing Recombinant aoHGE Polypeptides
To determine if recombinant aoHGE NCH-1 polypeptides are able to elicit an immune response that is protective against human granulocytic ehrlichiosis, we induce expression of the protein in a culture of E. coli as described supra.
We then inject mice with live E. coli expressing an aoHGE NCH-1 protein and boost for a period of weeks. As a control, we inject mice with E . coli transformed with the vector, pDC197-12. We bleed the mice after the last boost and prepare an immunoblot, as described supra, to determine if the mice are synthesizing antibody against the recombinant aoHGE polypeptide.
We then challenge the mice with the various isolates of aoHGE to determine if active immunization elicits a protective immune response against a range of aoHGE isolates. We then sacrifice the mice and evaluate for infection and disease as described supra . We identify protective aoHGE polypeptides by their ability to prevent aoHGE infection or disease.
Those of skill in the art would be able to identify protective aoHGE polypeptides from other isolates according to the methods described herein.
Example XIV - Active Immunization Of Mice With Purified Recombinant aoHGE Polypeptides
To demonstrate that the immune response generated by immunization with purified recombinant aoHGE polypeptides is sufficient to fully protect against subsequent infection and the clinical manifestations of disease, we immunize mice with purified recombinant aoHGE polypeptides prepared as described in Example 10, and boost periodically. As a control, we inject mice with purified glutathione S- transferase. After the final boost, we bleed the mice and prepare an immunoblot as described in Example III, to determine if the mice are synthesizing antibody against the recombinant protein. We then challenge the mice with various isolates of aoHGE and evaluate them for infection and disease. We identify protective recombinant aoHGE polypeptides by their ability to prevent aoHGE infection and disease.
Example XV - Identification of aoHGE Polypeptide Fragments That Elicit Protective
Antibody Production — B Cell Epitopes
One way to identify regions of aoHGE proteins that contain protective B-cell epitopes is to determine which regions of the protein are recognized by monoclonal antibodies that confer protection against aoHGE infection.
We begin by producing fragments of the aoHGE protein. First, we PCR-amplify portions of the gene using oligonucleotide primers containing EcoRl and BamHl sites. We then clone these fragments into pGEX- 2T in frame with the glutathione S-transferase protein. We then transfo1'"1. E .coli with the recombinant plasmids, and induce expression of the aoHGE polypeptide fragments as glutathione S-transferase fusion proteins. Next, we prepare an immunoblot with whole cell extracts from E.coli expressing either the aoHGE fragment-glutathione S-transferase fusion proteins, or the full length aoHGE polypeptide-glutathione S- transferase fusion protein. We then incubate the immunoblot with a monoclonal antibody previously shown to confer protection against aoHGE infection (see Example XVIII) .
Binding of the protective monoclonal antibody to a fragment indicates that the fragment contains a protective (B cell) epitope. This example does not necessarily imply that the epitope recognized by the monoclonal antibody is the only protective epitope in the aoHGE protein. Nor does it imply that the region encoding the B-cell epitope recognized by the monoclonal antibody does not also contain a T-cell epitope. However, it does illustrate one method that may be used to identify protective epitopes of aoHGE proteins .
Another way to identify regions of aoHGE proteins that contain B cell epitopes is to use aoHGE polypeptide fusion proteins to absorb antibodies from protective polyclonal serum. The various T7-aoHGE or aoHGE-glutathione S-transferase fusion proteins are coupled to CnBr activated Sepharore in order to construct a column, using standard techniques.
We prepare polyclonal anti-aoHGE antiserum as in Example III.
We then pass the serum over the aoHGE polypeptide-fusion protein column, to absorb antibodies which recognize the fusion protein. The residual serum is then used to passively immunize mice, as described supra.
We challenge the immunized mice with aoHGE, sacrifice and examine the tissues and blood for infection and disease. We are able to determine which fusion proteins are able to elicit protective antibodies, because polyclonal rabbit serum containing antibodies which recognize such fusion proteins — containing B cell epitopes — will be depleted of the ability to confer protection to passively immunized mice.
Once we have localized various epitopes to regions of the fusion proteins, we conduct further analyses using short synthetic peptides of 5-35 ammo acids. The use of synthetic peptides allows us to further define each epitope, while eliminating variables contributed by the non-aoHGE portion of the fusion protein.
Example XIV - Active Immunization With
Purified. Heat-killed aoHGE
To determine whether the aoHGE polypeptides of this invention were able to elicit an immune response that is effective to protect against aoHGE infection, we actively hyperimmunized five C3H mice subcutaneously in the back with 15 μg purified, -killed aoHGE, prepared as described in Example IV, m complete Freund's adjuvant (CFA) and boosted twice with an identical amount of antigen in incomplete Freund's adjuvant (IFA) at bi-monthly intervals. Prior to immunization, we dialyzed the purified aoHGE against PBS, and treated at 56°C for 1 hour. We immunized five control mice with 10 μg BSA in an identical fashion.
Fourteen days after the final boost, we bled the mice and examined the sera from each animal for aoHGE antibodies by probing lysates of aoHGE-infected HL-60 cells in immunoblot as descrioed Example I. aoHGE-immunized mice had high titers of aoHGE-specifIC antibodies, detectable by immunoblot at a serum dilution of at least 1:2,000.
We challenged the actively immunized and sham immunized mice by syringe and tick-borne inoculation. For the syringe inoculation, we challenged mice actively immunized with purified, -killed aoHGE with 100 μl of blood from a mouse that had been infected with aoHGE for 2 weeks. We then sacrificed the mice 10 days after challenge and evaluated for aoHGE infection by PCR using aoHGE specific 16S ribosomal DNA primers [P. Pancholi et al . , "Ixodes dammmi as a Potential Vector of Human Granulocytic Ehrlichiosis, " J. Inf. Dis . , 172, pp. 1007-12 (1995)]. All 5 control mice developed aoHGE infection, based on aoHGE-specific DNA the blood. In contrast, no aoHGE DNA could be detected in the blood of 4 of 5 mice vaccinated with purified, -killed aoHGE .
For the tick inoculation, we placed 3-4 aoHGE-mfected I. dammmi nymphs which had fed to repletion on CD-I mice that had been infected for 2 weeks with aoHGE . The aoHGE infection rate of the ticks was 85% as determined by visual inspection of the salivary glands using the Feulgen reaction [S.R. Telford et al., Proc . Na tl . Acad. Sci . USA, 93, pp. 6209-6214, supra ] . The ticks were allowed to engorge to repletion on immunized and control mice.
Fourteen days after the ticks had fallen off the immunized animals, we killed the mice with C02 and obtained blood by cardiac exsangumation. We examined blood smears which were air dried and stained with DiffQuik (200 high power fields/smear) for the presence of morulae and calculated the percentage of aoHGE- infected neutrophils. We considered the presence of 1 or more definitive morulae as a positive.
In addition, at necropsy, we inoculated lOOμl of anticoagulated blood from each mouse into culture flasks containing 5 ml of 5 X 105 to 1 X 106 HL-60 cells per ml. We determined aoHGE infection of the HL-60 cells at 2, 3, 4 and 6 weeks after inoculation.
Finally, mice were examined for aoHGE by PCR using aoHGE specific 16S rDNA, supra .
AS shown in Table 1, 5 of 9 control mice had morulae in peripheral neutrophils, 6 of 9 control mice were culture positive and 9 of 9 control mice were PCR positive for aoHGE DNA in the blood. In contrast, no morulae were detected in blood smears of the immunized mice (Fisher Exact Test, P = 0.015 compared with control mice) and aoHGE could not be cultured from any of the immunized mice (Fisher Exact Test, P = 0.005, compared with control mice). Five of nine immunized mice were PCR positive (Fisher Exact Test, P = 0.041 compared to control mice) .
The p~sif-ve PCR reoults may, in part, be explained by the extreme sensitivity of the assay. In a quantitative PCR study, we detected product using 5 X 10"16 g of aoHGE DNA was used as the template. aoHGE has a chromosome that migrates at approximately 700 kb in pulse-field gel electrophoresis . By estimating that 1 mole of aoHGE has a molecular mass of approximately 4.6 X 108 g (7.0 X 105 bp X 660 g/bp) , we calculate that 1 aoHGE has an approximate molecular mass of 7.6 X 10"16 g (4.6 X 10a g/mole - 6.02 X 1023 organisms/mole), we estimate that the PCR assay can detect a single aoHGE organism.
The data indicate that active immunization with purified, killed aoHGE in CFA elicits a protective immune response.
TABLE 1
Example XVII - Identification of aoHGE
Polypeptide Epitopes That
Elicit Cross-Protective Antibodies
Antibodies elicited in the actively immunized mice that are directed against epitopes that are shared among various isolates of aoHGE, will confer protection against infection with these various isolates of aoHGE. To determine which epitopes of aoHGE polypeptides are able to elicit such antibodies, we immunize mice with the various aoHGE polypeptide fusion proteins, and challenge the mice with various isolates of aoHGE as described, supra . We inoculate C3H mice with various aoHGE isolates to determine which are infective and then inoculate the various infective isolates into mice which have been actively immunized with aoHGE polypeptide fusion proteins. We examine the mice for signs of infection and disease. We design a vaccine around the epitopes that are shown to confer protection against infection with many different isolates of aoHGE.
To determine the longevity of protection, we immunize mice with aoHGE polypeptide fusion protein and boost. We then infect the mice with aoHGE and evaluate for infection and disease at 6 months after challenge.
Example XVIII - Decrease In Spirochete Load In
Ticks Feeding On Immunized Animals
Previous studies with B . burgdorferi have shown that immunization of mice with recombinant OspA can eliminate the spirochetes from ticks feeding on the immunized animals [E. Fikrig et al., "Elimination of Borrelia burgdorferi from vector ticks feeding on OspA- lmmunized mice", Proc. Natl. Acad. Sci., 89, pp. 5418- 5421 (1992)]. Thus, to determine if aoHGE are killed when infected ticks feed on animals immunized with the aoHGE polypeptides of this invention, we conduct the following experiment.
We place ticks, infected with aoHGE as described m Example III, on mice immunized with GT (control), with aoHGE-GT fusion proteins. After feeding to repletion, the ticks are allowed to naturally detach over water. Approximately ten days post-repletion, we homogenize individual ticks in PBS and spot aliquots on slides. We allow the slides to air-dry, fix in cold acetone and assay by direct or indirect immunofluorescence .
For the direct immunofluorescence assay, we incubate the slides with FITC-conjugated anti-aoHGE antiserum, mount under a coverslip and examine on a Zeiss Axioscop® Fluorescent Microscope. We quantify the aoHGE by counting the number of fluorescmg cells m approximately 20 fields per slide.
One of skill in the art would understand that the effect of immunization with other aoHGE polypeptides of this invention on aoHGE in ticks can be readily determined without undue experimentation using the methods taught herein.
Example XIX - Passive Immunization of Mice
To investigate whether passive immunization with anti-aoHGE antserum can confer protection against aoHGE infection and HGE, we performed the following aoHGE immunization study. We produced polyclonal mouse anti-aoHGE antiserum by inoculating C3H mice with 15 μg of heat- killed aoHGE lysate prepared as described in Example IV in complete Freund's adjuvant (CFA) and boosted twice with the same preparation in IFA. We immunized control mice with normal serum. Two weeks after the last boost, we bled the animals for serum.
We then passively immunized 3-5 naive mice mtradermally with 200 μl aoHGE antiserum diluted 1:5 PBS m three separate experiments. Control mice were passively immunized with normal mouse serum. One day following passive immunization, we challenged immunized and control mice with aoHGE by intraperitoneal inoculation with 50 μl of blood from mice that had been infected with NCH-1 isolate two weeks earlier, an by tick transmission using 3-4 aoHGE infected ticks. Mice were boosted with 200 μl of aoHGE antiserum diluted 1:5 with PBS on days 4, 8 and 12 after challenge. On day 14 after challenge, we sacrificed the mice and analyzed their blood and tissues for signs of aoHGE infection and disease. Specifically, we evaluated 100 μl of anticoagulated blood a coulter counter (Antech Diagnostics, Farm gdale, NY) for leukopenia. We also removed and immediately weighed the whole spleen from each animal at necropsy. We assessed infection by examination of peripheral blood smears for morulae, culture m HL-60 cells and by PCR using 16S rDNA aoHGE-specific primers. As set forth in Table 2, morulae were detected in blood smears of 7 of 11 control mice compared to 1 of 12 immunized mice (Fisher Exact Test, P =0.008). Likewise, we recovered aoHGE by culture from 7 of 11 control mice compared to 1 of 12 immunized
Using PCR, aoHGE was amplified from blood in 10 of 11 control mice compared to 4 of 12 immunized mice (Fisher Exact Test, P= 0.001). However, we determined that immunized mice that were PCR positive had fewer aoHGE in peripheral blood than the control mice. Using serial dilution PCR, amplified DNA was discernible serum from control mice at a dilution of 103-108 whereas product could only be obtained from serum of immunized mice up to a dilution of 103. As noted, supra, we estimate that the PCR assay can detect a single aoHGE organism. Accordingly, passive immunization either conferred complete protection or lessened the severity of aoHGE infection.
In terms of clinical symptoms, the control mice but not the protected mice exhibited neutropenia (462 cell/mm3 ± 280 SD compared 3,240 cells/mm3 ± 1,340 SD) and splenomegaly (0.27 g ± 0.05 SD compared to 0.12g ± 0.03 SD) .
TABLE 2
Example XX - Passive Immunization With
An i-aoHGE Monoclonal Antibodies
To determine if immunity to aoHGE infection and disorders caused by such infection can be conferred by passive immunization with an anti-aoHGE monoclonal antibody, we prepare anti-aoHGE monoclonal antibodies by fusion of spleen cells from mice infected with aoHGE to mouse P3X63Ag8 myeloma cells, according to methods well known to those of skill in the art. We then determine the isotypes of the monoclonals, and select antibodies reactive with aoHGE for aoHGE immunization studies .
Those of skill in the art would understand that monoclonal antibodies directed against other isolates of aoHGE and against individual aoHGE proteins may be generated according to the methods described herein.
We then passively immunize mice with supernatant from monoclonal antibody producing cells, and challenge the animals with aoHGE. We then sacrifice the mice and examine the blood and tissues for signs of aoHGE infection and disease.
Example XXI - Passive Immunization With
Antibodies Pirected Against Recombinant aoHGE Polypeptides
To determine if antiserum from animals immunized with recombinant aoHGE polypeptides confers protection, we passively immunize mice with serum from mice immunized with the recombinant aoHGE polypeptide or with E. coli expressing a recombinant aoHGE polypeptide as described in Example IX. We then challenge the passively immunized mice aoHGE shortly after the immunization as desribed, supra . We then sacrifice the mice and examine the blood and tissues for signs of aoHGE infection and disease. One of skill in the art would understand that to detect a protective effect, one can vary the experimental conditions. For example, one could obtain antiserum by immunization with a recombinant polypeptide without GT, collect antiserum at a different time point when the titer is higher, passively immunize with more antiserum, decrease the aoHGE challenge dose, or other means known in the art.
Example XXII - Determination of Protective Epitopes
We construct recombinant genes which will express fragments of the aoHGE polypeptides in order to determine which fragments contain protective epitopes. First, we produce overlapping 200-300 bp fragments which encompass the entire nucleotide sequence of each of the genes, either by restriction enzyme digestion, or by amplification of specific sequences of using PCR and oligonucleotide primers containing restriction endonuclease recognition sequences, as described supra .
We then clone these fragments into an appropriate expression vector, preferably a vector from which the fragments will be expressed as fusion proteins, in order to facilitate purification and increase stability. For example, the gene fragments could be cloned into pGEMEX (Promega, Madison, WS) and expressed as T7 gene 10 fusion proteins. Such proteins would be insoluble and thus easily purified by recovery of the insoluble pellet fraction followed by solubilization m denaturants such as urea. Alternatively, the fragments could be expressed as glutathione S-transferase fusion proteins as described above. We then transform appropriate host cells and induce expression of the fragments.
One way to identify fragments that contain protective B-cell epitopes is to use the individual purified fragments to actively immunize mice, as described above. After challenge of the mice with aoHGE, we determine the presence of infection by blood and spleen cultures in HL-60 cells and by examination of peripheral blood smears for granulocytic morulae.
Another technique to identify protective epitopes is to use the various fragments to immunize mice, allow ticks infected with aoHGE to feed on the mice, and then determine whether the immune response elicited by the fragments is sufficient to cause a decrease in the level of aoHGE in the ticks. Any epitopes which elicit such a response, even if they are not sufficient by themselves to confer protection against subsequent infection with aoHGE, may be useful in a multicomponent vaccine.
Once we have localized various epitopes to particular regions of the fusion proteins, we conduct further analyses using short synthetic peptides of 5-35 ammo acids. The use of synthetic peptides allows us to further define each epitope, while eliminating any variables contributed by the non-aoHGE portion of the fusion protein. Example XXIII - Preparation of a Multicomponent Vaccine
We determine which of the protective epitopes is able to elicit antibodies that will protect against subsequent infection with isolates of aoHGE other than the isolate from which the protective polypeptide was cloned. We then design a vaccine around those epitopes. If none of the protective epitopes is able to confer protection against infection with other isolates of aoHGE, it may be particularly advantageous to isolate the corresponding aoHGE polypeptides from those isolates. A multicomponent vaccine may then be constructed that comprises multiple epitopes from several different aoHGE isolates. Such a vaccine will, thus, elicit antibodies that will confer protection against a variety of different isolates.
A skilled artisan would appreciate that with knowledge of the protective epitopes as determined by the methods described herein, one can readily design a multicomponent vaccine comprising those epitopes and epitopes that have been shown to be protective against other diseases, particularly other diseases known to be transmitted by the J. scapularis tick, such as Lyme disease and babesiosis.
Example XXIV - Identification of T cell epitopes Stimulation in animals of a humoral immune response containing high titer neutralizing antibodies will be facilitated by antigens containing both T cell and B cell epitopes. To identify those polypeptides containing T cell epitopes, we infect mice with aoHGE in complete Freund's adjuvant, as described supra .
Shortly after priming, we harvest the lymph nodes and generate m vi tro T cell lines. These T cell lines are then cloned using limiting dilution and soft agar techniques. We use these T cell clones to determine which polypeptides contain T cell epitopes. The T cell clones are stimulated with the various polypeptides and syngeneic antigen presenting cells. Exposure of the T cell clones to the polypeptides that contain T cell epitopes in the presence of antigen presenting cells causes the T cells to proliferate, which we measure by 3 H-Thymidme incorporation. We also measure lymphokine production by the stimulated T cell clones by standard methods .
To determine T cell epitopes of the polypeptides recognized by human T cells, we isolate T cell clones from aoHGE-infected patients of multiple
HLA types. T cell epitopes are identified by stimulating the clones with the various polypeptides
3 and measuring H-Thymidine incorporation. The various
T cell epitopes are then correlated with Class II HLA antigens such as DR, DP, and DQ. The correlation is performed by utilization of B lymphoblastoid cell lines expressing various HLA genes. When a given T cell clone is mixed with the appropriate B lymphoblastoid cell line and an aoHGE polypeptide, the B cell will be able to present the polypeptide to the T cell.
3 Proliferation is then measured by H-Thymidme incorporation .
Alternatively, T cell epitopes may be identified by adoptive transfer of T cells from mice immunized with various of the aoHGE polypeptides of this invention to naive mice, according to methods well known to those of skill in the art. [See, for example, M.S. DeSouza et al., "Long-Term Study of Cell-Mediated Responses to Borrelia burgdorferi in the Laboratory Mouse", Infect. Immun., 61, pp. 1814-22 (1993)].
We then synthesize a multicomponent vaccine based on different T cell epitopes. Such a vaccine is useful to elicit T cell responses in a broad spectrum of patients with different HLA types.
We also identify stimulating T cell epitopes m other immunogenic aoHGE polypeptides or in non-aoHGE polypeptides and design multicomponent vaccines based on these epitopes in conjunction with B cell and T cell epitopes from the aoHGE polypeptides of this invention.
Example XXV - Construction of fusion proteins
Comprising T and B cell epitopes After identifying T cell epitopes of the aoHGE polypeptides, we construct recombinant proteins comprising these epitopes as well as the B cell epitopes recognized by neutralizing antibodies. These fusion proteins, by virtue of containing both T cell and B cell epitopes, permit antigen presentation to T cells by B cells expressing surface immunoglobulin. These T cells in turn stimulate B cells that express surface lmmunoglobin, leading to the production of high titer neutralizing antibodies. We also construct fusion proteins from the aoHGE polypeptides by linking regions of the polypeptides determined to contain B cell epitopes to strong T cell epitopes of other antigens. We synthesize an oligonucleotide homologous to am o acids 120 to 140 of the Hepatitis B virus core antigen. This region of the core antigen has been shown to contain a strong T cell epitope [D.R. Millich, et al., supra 1. The oligonucleotide is then ligated to the 5' and 3' ends of segments of DNA encoding the B cell epitopes recognized by neutralizing antibodies. The recombinant DNA molecules are then used to express a fusion protein comprising a B cell epitope from the aoHGE polypeptide and a T cell epitope from the core antigen, thus enhancing the lmmunogenicity of the polypeptide.
We also construct fusion proteins comprising epitopes of the aoHGE polypeptides as well as epitopes of the tetanus toxoid protein.
We also construct a plasmid containing the B cell epitopes of various of the aoHGE polypeptides incorporated into the flagellm protein of Salmonella . Bacterial flagellm are potent stimulators of cellular and humoral responses, and can be used as vectors for protective antigens [S.M.C. Newton, C. Jacob, B. Stocker, "Immune Response To Cholera Toxin Epitope Inserted In Salmonella Flagellm", Science, 244, pp. 70-72 (1989) ] .
We cleave the cloned H 1-d flagellm gene of Salmonella muenchens at a unique Eco RV site in the hypervariable region. We then insert blunt ended DNAs encoding protective B cell epitopes of the polypeptides using T4 DNA ligase. The recombinant plasmids are then used to transform non-flagellate strains of Salmonella for use as a vaccine. We immunize mice with live and formalin killed bacteria and assayed for antibody production. In addition, we test spleen cells for proliferative cellular responses to the peptide of interest. Finally we challenge the mice immunized with this agent with aoHGE as described supra. We also construct fusion proteins comprising B cell epitopes from one of the aoHGE polypeptides and T cell epitopes from a different aoHGE polypeptide or other immunogenic aoHGE polypeptides. Additionally, we construct fusion proteins comprising T cell epitopes from aoHGE polypeptides and B cell epitopes from an aoHGE polypeptide and/or other immunogenic aoHGE polypeptides. Construction of these fusion proteins is accomplished by recombinant DNA techniques well known to those of skill in the art. Fusion proteins and antibodies directed against them, are used in methods and composition to detect, treat, and prevent human granulocytic ehrlichiosis as caused by infection with aoHGE .
Example XXVI - Construction Of An aoHGE Fusion
Protein From aoHGE Polypeptides Of Different Isolates
We identify protective epitopes within aoHGE polypeptides from an aoHGE isolate other than NCH-1 by producing overlapping fragments of the protein and testing each the for presence of T cell and B cell epitopes, and/or for the ability to confer protection against aoHGE infection and disease in our animal model system. We then select the fragments which encode both protective epitopes and amino acid sequences that differ from each other and use these fragments to construct aoHGE polypeptide fusion proteins comprising protective epitopes from both isolates. Such fusion proteins confer protection against a broad range of aoHGE isolates. Example XXVII - Oral Immunization Of Mice With aoHGE Polypeptide Fusion Proteins
To determine whether oral vaccination with an aoHGE polypeptide is sufficient to protect mice from infection and disease as caused by aoHGE, we culture E. coli harboring the aoHGE polypeptide-containign plasmid at 30°C. We induce expression of the fusion protein by raising the temperature to 42°C for 2 hours, then harvest the bacteria by centrifugation and resuspend in PBS at a concentration of 1 x 10 bacteria/ml.
We use 0.1 ml of this suspension to orally inoculate mice. Inoculation may be performed by gavage using a ball tipped metal needle. We boost the mice with the same amount of bacteria on days 10, 20, 30 and 40. We inoculate control mice in a similar fashion with bacteria lacking the pl97-aoHGE polypeptide plasmid. We bleed the mice 7 days after the second and fourth boosts and conduct immunoblots on extracts of aoHGE, as described in Example I, to detect and quantify antibodies against the aoHGE polypeptide. Fourteen days after the last boost, we challenge the mice by inoculation with aoHGE and evaluate for infection and disease.
While we have described a number of embodiments of this invention, it is apparent that our basic constructions may be altered to provide other embodiments which utilize the processes and products of this invention. Therefore, it will be appreciated that the scope of this invention is to be defined by the appended claims, rather than by the specific embodiments which have been presented by way of example . SEQUENCE LISTING
(1) GENERAL INFORMATION:
(i) APPLICANT:
(A) NAME: Yale University
(B) STREET: 451 College Street
(C) CITY: New Haven
(D) STATE: CT
(E) COUNTRY: USA
(F) ZIP: 06520
(ii) TITLE OF INVENTION: COMPOSITIONS AND METHODS FOR THE PREVENTION AND DIAGNOSIS OF HUMAN GRANULOCYTIC EHRLICHIOSIS
(iii) NUMBER OF SEQUENCES: 12
(iv) COMPUTER READABLE FORM:
(A) MEDIUM TYPE: Floppy disk
(B) COMPUTER: IBM PC compatible
(C) OPERATING SYSTEM: PC-DOS/MS-DOS
(D) SOFTWARE: Patentln Release #1.0, Version #1.30
(v) CURRENT APPLICATION DATA:
(A) APPLICATION NUMBER: PCT Unassigned
(B) FILING DATE: Concurrently Herewith
(C) CLASSIFICATION:
(vi) PRIOR APPLICATION DATA:
(A) APPLICATION NUMBER: US 60/027,180
(B) FILING DATE: 01-OCT-1996
(2) INFORMATION FOR SEQ ID NO:l:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 1669 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS : double
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: cDNA
(ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 357..974
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:l:
CTCGGGTACA GGTTTTTATA TTTGGAGCTC TTGTACTGTG TTTACCCCGG GATTTATTAT 60
TGGGTAGGCT TGATATTCAG GTTCTATCAT CGCAGCTATT CATGGCGCTA TTACAGATAA 120
ATTTGGAATT TTGTANATTG GTTATCTAGT ATTCTATTAT TGGATTTCTA AGGTAAGACA 180
TAGTGCACAT TGCTTTGAGC ACTAATCGTA TGTCTGGTCG TGAATTATTC ATCTAAACCA 240 ATACTAATTA CAATGCTGCA ATAGTTTTTA GCTATTTAAC CCCGATATCT ATTGCATTGC 300
GGCAGTATTA TTAGAAAAAG ATGGAGCAGA ATATCTACTA GCTAAGGAGT TAGCTT 356
ATG ATG TTG TTA CTG GAC AGA CTG ATA AGC TTG CTG CTG CTC TTG CCA 404 Met Met Leu Leu Leu Asp Arg Leu lie Ser Leu Leu Leu Leu Leu Pro 1 5 10 15
AGA CCT CCG GGA AAG ATA TCG TTC AGT TTG CTA AGG CGG TGG AGA TTT 452 Arg Pro Pro Gly Lys lie Ser Phe Ser Leu Leu Arg Arg Trp Arg Phe 20 25 30
CTG CTC CTA AGA TCG ATG AGA AGG TTT GTG CGA CGA AAG ATC GCG AAG 500 Leu Leu Leu Arg Ser Met Arg Arg Phe Val Arg Arg Lys lie Ala Lys 35 40 45
GTG GGA GTG GTA ATA AAT ACG GTG TTT ACG GAG CGA CTA CCG ATG ATT 548 Val Gly Val Val He Asn Thr Val Phe Thr Glu Arg Leu Pro Met He 50 55 60
CAT CAA CAT ATC CAA GGG CAC GAT GTG GTG CTG CAG GGC ACA ATA GTC 596 His Gin His He Gin Gly His Asp Val Val Leu Gin Gly Thr He Val 65 70 75 80
AGA GTG GAA GTC CAA GCA CTC CAC AGG TTT TGC ATG ACT TTG CGG AGA 644 Arg Val Glu Val Gin Ala Leu His Arg Phe Cys Met Thr Leu Arg Arg 85 90 95
AAA CTC TGT GGA AAT GGT AGT AAG AAC TGG CCC ACA TCA AGC GGC ACT 692 Lys Leu Cys Gly Asn Gly Ser Lys Asn Trp Pro Thr Ser Ser Gly Thr 100 105 110
GGA ACT CCA AAG CCA GAA ACT AAT GAC AAC GCC AAA GCT GTC GCT GGA 740 Gly Thr Pro Lys Pro Glu Thr Asn Asp Asn Ala Lys Ala Val Ala Gly 115 120 125
GAC CTA ACA AAG CTC AAC TCT GAC GAA AAA ACC ATA GTA GCA GGG TTA 788 Asp Leu Thr Lys Leu Asn Ser Asp Glu Lys Thr He Val Ala Gly Leu 130 135 140
TTA GCC AAA ACT ATT GAA GGG GGT GAG GTT GTG GAA ATC AGG GCG TTT 836 Leu Ala Lys Thr He Glu Gly Gly Glu Val Val Glu He Arg Ala Phe 145 150 155 160
CTT CTA CTT TGT GTT TTT GGA TTT TTA TCA ACG ATT GCG AAG GCA GCA 884 Leu Leu Leu Cys Val Phe Gly Phe Leu Ser Thr He Ala Lys Ala Ala 165 170 175
CCA GGT GAA ACC CAT AAT ACT ACT AAT ACG TAT CTC ATA CAC GAC ACA 932 Pro Gly Glu Thr His Asn Thr Thr Asn Thr Tyr Leu He His Asp Thr 180 185 190
TCC ATG CAA TGT CAT CGT ATT GCA CGT CGG AGG ATC AGG AGA 974
Ser Met Gin Cys His Arg He Ala Arg Arg Arg He Arg Arg 195 200 205
TAATATCACA ATTTCCAAAT ATTGATCCTG GGATAAAATC TAGTAACGAC CCCAACAACT 1034
CTAACCCCGC CATAGAAGGT GAAGACACTA CCCAACGAAT CCTAAGTTAA TAATTCTTGC 1094 CTCTCTAATT CACAACTCAT TCGTGTTGCG TTAGGTTAGG CAGAAAATAG GACTTATGGG 1154
ATCGATTCAT TGCCGCTTTA ATCACGACCT AAACTCCACG ACAATGAGTC CTCAAAGTAC 1214
ATACCTTAAT CAAGTCCCAA CGCACTTATG CAAATGCAAT GTCGTAGATT ATAGATTCCT 1274
AAAAACCCAC GATAATAGTC CGTTGAACCA ACTATGGTCC TATTCAATAG ATCCTATAGT 1334
AAAGTCCTAT TCCCATTACT TAATACAACA ACTCTTCAAT CACACGCGAA AGAAAACTGA 1394
AGTGTTCATG AAGGTCCACG CAAAGATGGC GCGCACGAAC CAGTTGAAAA CCACAATACG 1454
TATACAATGG TTCGCAACAT ATAGTTTAGA TACATTATCG GATAAGACGT CTTATAGAAC 1514
GTCAGATTCG CAACGTGTGT TTTGATTTCG GGCATTGTTC ATAAACGGGA ACAAGACTGT 1574
GGGCTATTGA TATGGCGATT ATTTACGTAG TCTTAAGGCC TTAAGCTATA GTTCGAATAG 1634
CTATGGCAGC TGGAGCTCCC CCCGGGCATG GGTTA 1669
(2) INFORMATION FOR SEQ ID NO: 2:
(i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 206 amino acids
(B) TYPE: amino acid (D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:2:
Met Met Leu Leu Leu Asp Arg Leu He Ser Leu Leu Leu Leu Leu Pro 1 5 10 15
Arg Pro Pro Gly Lys He Ser Phe Ser Leu Leu Arg Arg Trp Arg Phe 20 25 30
Leu Leu Leu Arg Ser Met Arg Arg Phe Val Arg Arg Lys He Ala Lys 35 40 45
Val Gly Val Val He Asn Thr Val Phe Thr Glu Arg Leu Pro Met He 50 55 60
His Gin His He Gin Gly His Asp Val Val Leu Gin Gly Thr He Val 65 70 75 80
Arg Val Glu Val Gin Ala Leu His Arg Phe Cys Met Thr Leu Arg Arg 85 90 95
Lys Leu Cys Gly Asn Gly Ser Lys Asn Trp Pro Thr Ser Ser Gly Thr 100 105 110
Gly Thr Pro Lys Pro Glu Thr Asn Asp Asn Ala Lys Ala Val Ala Gly 115 120 125
Asp Leu Thr Lys Leu Asn Ser Asp Glu Lys Thr He Val Ala Gly Leu 130 135 140
Leu Ala Lys Thr He Glu Gly Gly Glu Val Val Glu He Arg Ala Phe 145 150 155 160 Leu Leu Leu Cys Val Phe Gly F.e Leu Ser Thr He Ala Lys Ala Ala 165 170 175
Pro Gly Glu Thr His Asn Thr Thr Asn Thr Tyr Leu He His Asp Thr 180 185 190
Ser Met Gin Cys His Arg He Ala Arg Arg Arg He Arg Arg 195 200 205
(2) INFORMATION FOR SEQ ID NO: 3:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 1753 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: double
(D) TOPOLOGY: linear
(n) MOLECULE TYPE: cDNA
(lx) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 1..1407
(xi) SEQUENCE DESCRIPTION: SEQ ID NO:3:
CCT GAG ATA CAT TTA GAT TTG TAT TGG GCA CTA AAA AAT CCA TTC AAA 48 Pro Glu He His Leu Asp Leu Tyr Trp Ala Leu Lys Asn Pro Phe Lys 1 5 10 15
AGT GGA TAC AAA GAC ATA TTT CAA AAT ACG CCT ATT ATG TTT TAT ATA 96 Ser Gly Tyr Lys Asp He Phe Gin Asn Thr Pro He Met Phe Tyr He 20 25 30
TAC AAC ATA GAA AAG TTT AGA AAA AAG GTG ACT GAG CTT TAC AGA AAG 144 Tyr Asn He Glu Lys Phe Arg Lys Lys Val Thr Glu Leu Tyr Arg Lys 35 40 45
CTT AAT TTC AAT TAT ACA GAA GGA ATA AGG CAG AGT AAA AAT AAT AAA 192 Leu Asn Phe Asn Tyr Thr Glu Gly He Arg Gin Ser Lys Asn Asn Lys 50 55 60
AAT TAT TTA ATT TTT TAT AAA AAT AAC TGC CAA TAT TTA TAT GAA GTA 240 Asn Tyr Leu He Phe Tyr Lys Asn Asn Cys Gin Tyr Leu Tyr Glu Val 65 70 75 80
CAA AAA ATA GAT TCT CCA AAA AGC AAC GTA GAA ACT CTT ATT TAT TTT 288 Gin Lys He Asp Ser Pro Lys Ser Asn Val Glu Thr Leu He Tyr Phe 85 90 95
TAT GAG ATC AAA GAA ACT TAT GAT AAT CAA GAA CTA AAA AAT TTT TTA 336 Tyr Glu He Lys Glu Thr Tyr Asp Asn Gin Glu Leu Lys Asn Phe Leu 100 105 110
CTT TAT TTA AAG GCC TTG GAA AAC AAC TTA CAC AGC ATT AAA ATA CAA 384 Leu Tyr Leu Lys Ala Leu Glu Asn Asn Leu His Ser He Lys He Gin 115 120 125 AAT CTA GAA GGA TCC AAA CTT ACC ACC GAA CTA CTA GAG ATT CCA AAA 432 Asn Leu Glu Gly Ser Lys Leu Thr Thr Glu Leu Leu Glu He Pro Lys 130 135 140
TTT AAC TCC CTT AAA GAG CAA GAG CCA ATA ATA AAT TTT CAA AAC AAA 480 Phe Asn Ser Leu Lys Glu Gin Glu Pro He He Asn Phe Gin Asn Lys 145 150 155 160
AGA CTC AAA GAT TAT CAA ATC AAC GAA AAA AGC TTA AGA GAA TTT TTA 528 Arg Leu Lys Asp Tyr Gin He Asn Glu Lys Ser Leu Arg Glu Phe Leu 165 170 175
ATA AAT AAA CAC CAA GAT GAA ATC ATT AAA AAT TCA GAA TCA ATT GTG 576 He Asn Lys His Gin Asp Glu He He Lys Asn Ser Glu Ser He Val 180 185 190
CCT AAA AAT TTA GAA TAC AAT ATG GAA GGA AAT TTC ACG CTA TCT CAC 624 Pro Lys Asn Leu Glu Tyr Asn Met Glu Gly Asn Phe Thr Leu Ser His 195 200 205
GAT CAA TAC AAC ATC AAA TTC GAA AAT GGA AAA TTA AAT AAA ATA AAA 672 Asp Gin Tyr Asn He Lys Phe Glu Asn Gly Lys Leu Asn Lys He Lys 210 215 220
TTT AAA GAT AAA AAA GTT GAA TTT TTA AAC ACA TCT AGA ACC TAT TTT 720 Phe Lys Asp Lys Lys Val Glu Phe Leu Asn Thr Ser Arg Thr Tyr Phe 225 230 235 240
AAA GTT TCA TCA AAA AAA GAA CTA ATA AAA GAA GCA TCT ATT GAA AGT 768 Lys Val Ser Ser Lys Lys Glu Leu He Lys Glu Ala Ser He Glu Ser 245 250 255
TCA TTT TCA TTC TCA AAT GAA AAA ATT TTA GGA ATA AAA CAA TAT TTA 816 Ser Phe Ser Phe Ser Asn Glu Lys He Leu Gly He Lys Gin Tyr Leu 260 265 270
GCT TTT AAC TCT GCC AAA AAA TCA ACA ATT GAT TTT TTT ATA GAT GAG 864 Ala Phe Asn Ser Ala Lys Lys Ser Thr He Asp Phe Phe He Asp Glu 275 280 285
ACT ATC TCT AGC TTC TTT ATA TCG ATT AAA ATA AAA TGG CCT TCT AAA 912 Thr He Ser Ser Phe Phe He Ser He Lys He Lys Trp Pro Ser Lys 290 295 300
ATA GAC CTA GAT AAA AAA ACA TTA AAA AAA TGC AAT CCT GAT TAT CTT 960 He Asp Leu Asp Lys Lys Thr Leu Lys Lys Cys Asn Pro Asp Tyr Leu 305 310 315 320
CTT GAA TAT TCA GCT CTT GAA ATA CCT GTT TTT GAA ATT GCA AAA GGC 1008 Leu Glu Tyr Ser Ala Leu Glu He Pro Val Phe Glu He Ala Lys Gly 325 330 335
ACT AAT TTA AAA ATA ACA GCA AAA TAC AGC GAT CTT GAT ACT TAT GAA 1056 Thr Asn Leu Lys He Thr Ala Lys Tyr Ser Asp Leu Asp Thr Tyr Glu 340 345 350
AAA ATA ATA ATA ACT AAA AAC AAT CCC AAA GGC TAC ATT AAT GGC ACA 1104 Lys He He He Thr Lys Asn Asn Pro Lys Gly Tyr He Asn Gly Thr 355 360 365 GAA TTT TTG ATA TCT AAA GGA AAT GAT AAA AAC AGC AAC TTT TTT ATA 1152 Glu Phe Leu He Ser Lys Gly Asn Asp Lys Asn Ser Asn Phe Phe He 370 375 380
AGC TTT TTA AAT GTT GAA AAA CAT ATC ATT CAT ACA ATT AAT TAT AAA 1200 Ser Phe Leu Asn Val Glu Lys His He He His Thr He Asn Tyr Lys 385 390 395 400
ATT GAA AAA ATA AAT TCT AAG AAA TGG TTA ATT TTA AAT ATA GGG GGT 1248 He Glu Lys He Asn Ser Lys Lys Trp Leu He Leu Asn He Gly Gly 405 410 415
TCT TAT AAC ACA GTC AAG ATC CAA GAT GTA ATA AAT TAC TCT CAA ACA 1296 Ser Tyr Asn Thr Val Lys He Gin Asp Val He Asn Tyr Ser Gin Thr 420 425 430
CTA AAT TTA ATG ATA CTA CCA TTA AAT AAT AAT TTT GAT AAC AAA ATA 1344 Leu Asn Leu Met He Leu Pro Leu Asn Asn Asn Phe Asp Asn Lys He 435 440 445
AAA CTG AAT TCA AAA ATA AAA AAT TTA ATT TTT TAT ACT AAT ATA AAA 1392 Lys Leu Asn Ser Lys He Lys Asn Leu He Phe Tyr Thr Asn He Lys 450 455 460
AAA TAT GAA AAT AAA TAAATAATAA GTAGTAAAAT ATTAATAACT GGGTATAAAA 1447
Lys Tyr Glu Asn Lys
465
TTATCCTAAG AAGAACATAA AAAGTATTTA ATCTTTAATT TAAACAAAAA AGGTATAATC 1507
ATATGAACGA CAACATAATA GACGTACATT CCGCATTGGA AAAAGTCGGC ATTACAAACG 1567
ATCCTGTATT ATTGAAAAAT TTAACATCAG AATTGGGAAT GAAAGCATCT CATTCGAGAA 1627
ACAGAATCAT TTTATACATA GCATCAAACC CAAAAGAATA CTTTACAGCA AAAGAAGTTT 1687
ATAACAAACT TATAAAAGAA ATTCCAAGCC TATCAAAAGC AACGGTATAT AACACATTAA 1747
ATATGG 1753
(2) INFORMATION FOR SEQ ID NO: 4:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 469 ammo acids
(B) TYPE: amino acid (D) TOPOLOGY: linear
(ii) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 4:
Pro Glu He His Leu Asp Leu Tyr Trp Ala Leu Lys Asn Pro Phe Lys 1 5 10 15
Ser Gly Tyr Lys Asp He Phe Gin Asn Thr Pro He Met Phe Tyr He 20 25 30
Tyr Asn He Glu Lys Phe Arg Lys Lys Val Thr Glu Leu Tyr Arg Lys 35 40 45 Leu Asn Phe Asn Tyr Thr Glu Gly He Arg Gin Ser Lys Asn Asn Lys 50 55 60
Asn Tyr Leu He Phe Tyr Lys Asn Asn Cys Gin Tyr Leu Tyr Glu Val 65 70 75 80
Gin Lys He Asp Ser Pro Lys Ser Asn Val Glu Thr Leu He Tyr Phe 85 90 95
Tyr Glu He Lys Glu Thr Tyr Asp Asn Gin Glu Leu Lys Asn Phe Leu 100 105 110
Leu Tyr Leu Lys Ala Leu Glu Asn Asn Leu His Ser He Lys He Gin 115 120 125
Asn Leu Glu Gly Ser Lys Leu Thr Thr Glu Leu Leu Glu He Pro Lys 130 135 140
Phe Asn Ser Leu Lys Glu Gin Glu Pro He He Asn Phe Gin Asn Lys 145 150 155 160
Arg Leu Lys Asp Tyr Gin He Asn Glu Lys Ser Leu Arg Glu Phe Leu 165 170 175
He Asn Lys His Gin Asp Glu He He Lys Asn Ser Glu Ser He Val 180 185 190
Pro Lys Asn Leu Glu Tyr Asn Met Glu Gly Asn Phe Thr Leu Ser His 195 200 205
Asp Gin Tyr Asn He Lys Phe Glu Asn Gly Lys Leu Asn Lys He Lys 210 215 220
Phe Lys Asp Lys Lys Val Glu Phe Leu Asn Thr Ser Arg Thr Tyr Phe 225 230 235 240
Lys Val Ser Ser Lys Lys Glu Leu He Lys Glu Ala Ser He Glu Ser 245 250 255
Ser Phe Ser Pr.e Ser Asn Glu Lys He Leu Gly He Lys Gin Tyr Leu 260 265 270
Ala Phe Asn Ser Ala ^ys ^_,^ Ser Thr He Asp Phe Pne He Asp Glu 275 280 285
Thr He Ser Ser Phe Phe He Ser He Lys He Lys Trp Pro Ser Lys 290 295 300
He Asp Leu Asp Lys Lys Thr Leu Lys Lys Cys Asn Pro Asp Tyr Leu 305 * 310 315 320
Leu Glu Tyr Ser Ala Leu Glu He Pro Val Phe Glu He Ala Lys Gly 325 330 335
Thr Asn Leu Lys He Thr Ala Lys Tyr Ser Asp Leu Asp Thr Tyr Glu 340 345 350
Lys He He He Thr Lys Asn Asn Pro Lys Gly Tyr He Asn Gly Thr 355 360 365 Glu Phe Leu He Ser Lys Gly Asn Asp Lys Asn Ser Asn Phe Phe He 370 375 380
Ser Phe Leu Asn Val Glu Lys His He He His Thr He Asn Tyr Lys 385 390 395 400
He Glu Lys He Asn Ser Lys Lys Trp Leu He Leu Asn He Gly Gly 405 410 415
Ser Tyr Asn Thr Val Lys He Gin Asp Val He Asn Tyr Ser Gin Thr 420 425 430
Leu Asn Leu Met He Leu Pro Leu Asn Asn Asn Phe Asp Asn Lys He 435 440 445
Lys Leu Asn Ser Lys He Lys Asn Leu He Phe Tyr Thr Asn He Lys 450 455 460
Lys Tyr Glu Asn Lys 465
(2) INFORMATION FOR SEQ ID NO: 5:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 14 ammo acids
(B) TYPE: ammo acid
(C) STRANDEDNESS :
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: peptide
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 5:
Xaa Val Gly Asp Gly Val Tyr Asp Asp Leu Pro Ala Gin Arg 1 5 10
(2) INFORMATION FOR SEQ ID NO: 6:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 9 ammo acids
(B) TYPE: ammo acid
(C) STRANDEDNESS:
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: peptide
(x ) SEQUENCE DESCRIPTION: SEQ ID NO: 6:
Val Glu Leu Glu He Gly Tyr Glu Arg 1 5
\ 2 ) INFORMATION FOR SEQ ID NO: 7:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 16 ammo acids
(C) STRANDEDNESS:
(D) TOPOLOGY: linear
(11) MOLECULE TYPE: peptide
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 7:
Xaa Xaa Glu He He He Gly He Asp Leu Gly Thr Thr Asn Xaa Xaa 1 5 10 15
(2) INFORMATION FOR SEQ ID NO: 8:
(1) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 27 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: other nucleic acid (A) DESCRIPTION: /desc = "primer"
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 8: CACCTCGAGG GAATTCTGAT GCATTTA 27
(2) INFORMATION FOR SEQ ID NO: 9:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 27 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(ii) MOLECULE TYPE: other nucleic acid (A) DESCRIPTION: /desc = "p.-mer"
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 9: CACGAATTCC CTCCGGGAAA GATATCG 27
(2) INFORMATION FOR SEQ ID NO: 10:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 1334 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(n) MOLECULE TYPE: DNA (genomic) (ix) FEATURE:
(A) NAME/KEY: CDS
(B) LOCATION: 361..420
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 10:
GAATTCCTGA AAAGTATGAG AAAAGGAAAG ATAATCTTAG GAAGCGTAAT GATGTCTATG 60
GCTATAGTCA TGGCTGGGAA TGATGTTAGG GCTCATGATG ACGTTAGCGC TTTGGAAACT 120
GGTGGTGCGG GATATTTCTA TGTTGGTTTG GATTACAGTC CAGCGTTTAG CAAGATAAGA 180
GATTTTAGTA TAAGGGAGAG TAACGGAGAG ACTAAGGCAG TATATCCATA CTTAAAGGAT 240
GGAAAGAGTG TAAAGCTAGA GTCACACAAG TTTGACTGGA ACACACCTGA TCCTCGGATT 300
GGGTTTAAGG ACAACATGCT TGTAGCTATG GAAGGCAGTG TTGGTTATGG TATTGGTGGT 360
GCC AGG GTT GAG CTT GAG ATT GGT TAC GAG CGC TTC AAG ACC AAG GGT 408 Ala Arg Val Glu Leu Glu He Gly Tyr Glu Arg Phe Lys Thr Lys Gly 1 5 10 15
ATT AGA GAT AGT GGTAGTAAGG AAGATGAAGC TGATACAGTA TATCTACTAG 460 He Arg Asp Ser 20
CTAAGGAGTT AGCTTATGAT GTTGTTACTG GACAGACTGA TAAGCTTACC GCTGCTCTTG 520
CCAAGACCTC CGGTAAAGAT ATCGTTCAGT TTGCTAAGGC CGTGGAGATT TCCTCCCCTA 580
ATATCGAAAA GAAGGTTTGC AGGACGAAGA AGAATGGGGG TTCTCGTTAT AGTAAGTATG 640
CTTCGGAAAC TGCTAATAGC TCGGATGCAG CGAAAGCGGA TGTAGCTGTG TGTAGTGCAG 700
CCTCCTACGC CAGCAATAGT TCTCATGGGG GCACTGGTGA GGAGACTTTA AAGAACTTTG 760
TCAGTGCAAC GCTAAGTGGT GATGGCAGTG TGAACTGGCC NGCGTCGAAA AAGGCGGAAA 820
GCNATGCAGG CACTCCGGAA CCCGTTCAAA ACGATAACGC GGCAGCTGTA GCGAAGGACC 880
TAGTCAAGGA ATTAACCCCC GAAGAAAAAA CCATAGTGGC AGGGTTACTA GCTAAAACTA 940
TTGAAGGGGG CGAGGTTGTT GAGATCAGGG CGGTTTCTTC TACTTCTGTG ATGGTCAATG 1000
CTTGTTATGA TCTTCTTAGT GAAGGTTTAG GCGTTGTTCC TTATGCTTGC GTTGGTCTCG 1060
GTGGTAACTT CGTGGGGGTT GTTGATGGCC ATATCACTCC TAAGCTTGCT TATAGATTAA 1120
AGGCTGGGTT GAGTTATCAG CTCTCTCCTG AAATATCTGC TTTTGCAGGT GGTTTCTACC 1180
ATCGTGTTGT GGGAGATGGT GTTTATGATG ATCTTCCGGC TCAACGTCTT GTAGATGATA 1240
CTAGTCCGGC GGGTCGTACT AAGGATACTG CTATTGCTAA CTTCTCCATG GCTTATGTCG 1300
GTGGGGAATT TGGTGTTAGG TTTGCTTTTT AAGC 1334
(2) INFORMATION FOR SEQ ID NO: 11: ( ) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 20 ammo acids (D) TOPOLOGY: linear
(11) MOLECULE TYPE: protein
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 11:
Ala Arg Val Glu Leu Glu He Gly Tyr Glu Arg Phe Lys Thr Lys Gly 1 5 10 15
He Arg Asp Ser 20
(2) INFORMATION FOR SEQ ID NO: 12:
(l) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 2957 base pairs
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(n) MOLECULE TYPE: DNA (genomic)
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 12:
ATGCAGAAGA GCAAAGTTCT ATGCTTAGCG GCGGATTGCC AGGGATAGTG CTGATGAAGA 60
ACACGAGGAG TTTGAAGTAA TATTGTATTG ATTGTGACTG CGGGCGACGA TAGCGATTGT 120
CCTACCGGTG CTCACAAATC TCATGGGGGA CACAAGAAGT NGTCTCATCC TGTAGAGGTG 180
GAAGAGGAGC AAAGTCCTGC GCTTGATGTG ATAAGTAGTG AATTGCCTAA GGATGACATT 240
GCTGAGGATC AAGAGGGGAT AGGGGTAAAA GGTGGCTGCA ATGCTGGAGA TGATAGCGAT 300
TGTCCTACTG GCGCTCACAA ATCTCATGGG GGACACAAGA AGTTGTCTCA TCCTGTAGAG 360
GTGAAAGAGG AGCAAAGACC TGCGCTTGAT GTGATAAGTA GTGAATTGCC TAAGGATGAC 420
ATTGCTGAGG ATCAAGAGGG GATAAAAGTA GATTGCGACT GCGGAGATGA TTGCGATTGT 480
CCTACTGGCG CTCACAAATC TCATGGGGGA CACAAGAAGT TGTCTCATCC TGTAGAGGTG 540
AAAGAGGAGC AAAGACCTGC GCTTGATGTG ATAAGTAGTG AATTGCCTAA GGATGACATT 600
GCTGAGGATC AAGAGGGGAT AGGGGTAAAA GGTGGCTGCA ATGCTGGAGA TGATTGCCCT 660
AGTGATGAGT TGAATCTAGA GCATGGAAAT AAGGAGGTTG CGGTTTACGG AGAGGAAGGT 720
GCTTCAAGTA AAGATGAGGA TAATGTTGCA GAGTATGGTT CTGTTGGTGA TGTTGGCGCC 780
GATAGAGATG ATGTAGCTGA AGGTAATGAT ATTTACCCGT GGTGGGAAGA ATATGATGTC 840
GTAGAAGGGT TTGGGGCGTT TGATGACAGC TCCGATGGTG AGGGTTACTA CTCCGAAAGT 900
TCTCCTGTGT TTGGAGAAGA AGAGCGTGCC GAAGAAGATT TTGATGTGTA TCAAGATCCA 960 GTAGAAGTGG ATGATGAGGG AGTTGCTGAT TCTTCTGAGG ATTTAGAGGC TGATTCTGGT 1020
GCGGACTCTG TGACAGATTG GGAAGAAGAA GGTGACTATT TGCCAAATGA TGGCGATGTT 1080
ACTACTTCTT CTAGTGCTGG AAAACAGGAT ATTGAGATTG AAGCTTTAGT GGGGGAACAA 1140
CCCGAGTTGA AGCTATCGGA GACAAAAGAT AAAGTGTTGG CTGAGTTGAA AAGCATTCAG 1200
GAAAAGATAA AGACAGCGAA AAACGGAAGT AGTAGCAATT GTTGCATTTG GCAGGCGAGG 1260
GATGTGACGG TAACCAATAA GACGCTCTCT TATGAGCAAG TGAGGTCAAC ATATAGTTAT 1320
CCTGTTCCGA TGGTTATGCA ATCCAATGTG AATGATGGCA AAAACCGAGA GAATAAGTGT 1380
ACTTTGTATA AAGTTGAGAT GTGGGCAGGT GGTGAAGCTG CATCTGAGAC TGCCTTAGGT 1440
AAGAAGCGTT CTGGACGTCC AGGTCAGTAT GCAATGCTGG TGTTGGATTT TGAGAAGTTG 1500
AAGTCTCAAA CTAGAACGAG TACAGAAAAT TCACAATCCC AGGGAAGCAA CAAACCATGG 1560
TGGAGTGCTG CAGTGGAATC CATAAACAAG GCAGAGCATC ACTCGTTAAT CCTGGAAATA 1620
GGTGAAGGAG GGCAGCCCAG CGATCATAGC GCAGTTTCTA AAGGGGGTGA CACTGTACTG 1680
AAGCTGTGTA AGGATAATAG CCGCTCTAGC ACGGGGCAAT CTGGTACTGA TGCGTGGCCA 1740
GATGTGGAAA AGACAATAAC TGCGCAAAGT TCTTCTCAGG GCTCAAATTC TCACTCTTGC 1800
TATGAGGTAG CGAGAGTTGT TGGGGGAGGC AGCAGTGTTA TTGGTGAGCC GCAGTATGAG 1860
ATAGCAAAGG ATTTAATTGT TTATTACAGG ACAATCACAG GAGATGTATT GGCTAATGAC 1920
AATGGTGGCG ATAGTTTTCT GGCGAACAAT AACGCTATGT TTACGAAATT CTCATTCGAG 1980
ATGAATCTGC CTACACAAAG CGTCACTAGA GATGATGAGT TTCTCAAGGG ACTACTAGAG 2040
AACAAGCATT ACGTGGAAGG GCGTAGTCTA CCGAAGCGAC TTTGTACGTG GAAAGAAACG 2100
CGTAGTACAA GTACATCTCA GGAAAGAGAT AAGAACACCG CATTTATTCC TGGTATGGGT 2160
GGGTGTTGGC AAAGCGATAA AAACGGACAA ACGATCTTTT CAGAGATACC TGGAGTAGGA 2220
GAAAACGGTG CAGTAATGAT AACGTGCGAG CGTTGGGGTA CACCTAGTAC TAGTGGATCA 2280
AAGGTCACAA ATAAAGCTCC ATCTCAAGCA CGTGGACCAC GATAAAGAAA AATATGAACT 2340
CTTGCTAGTT TGCAATATAA AAGCTTGTGT TAAGACACCC AGTTCAAGCC CGTGGATGCT 2400
AAAGATCAAG TGTTGACTGT ATTGAAAGGC ATTGACAACA CCATTGTTGA GTAGATCTCT 2460
GAAGGATTTA GAAAACGTGC CAGGCTTATG CAATTTATTG CCCGATGTCT GGCATACGTT 2520
CAGAATTATA CGCAAAAATC AAAAGCAGCC CTGGCTACCC TTACGTAGCT CTCGCTGGCA 2580
TAGGTGTGTA CAACGTCCTC TCTTGCTATA CGAGCAGAAA TACAATTGGC AATATTTAAA 2640
CGTTGTAGCA AATTTTGTAT ATCAATTCCT TCGTCATGCT TCCTCTGCTC GTCCCTGTGT 2700
CGTATGCTCC GACCCCGCAC ACCGCCACAT CCTTCGCTCG CATTGGCGCC ACTGGCGTTA 2760 TCCGTCTCTT CAGCATACCT CTGCCTTAGC AAAGTGTTGG CCTACAGCAT CATGTATATA 2820
TTTTTTATAT TGAGTGCAAA GAAGGCATGA AAGAGGACAT ACAGAAAGTA AGCGGTTTCG 2880
TGTTTTTCAA GGACGGTCAT ACGCTAGGGT ATAATGCAAA GAAGTATTTG ATACTCTATT 2940 CACTGTCGCA CAGGTGT 2957

Claims

We claim :
1. An isolated, recombinant or synthetic DNA molecule comprising a DNA sequence which encodes an aoHGE polypeptide, wherein said polypeptide is selected from the group consisting of:
(a) the E6 polypeptide of SEQ ID NO: 2;
(b) the E7 polypeptide of SEQ ID NO: 4;
(c) the 44-kDa polypeptide of SEQ ID NO 11;
(d) the 44-1 polypeptide of SEQ ID NO: 5 (e) the 44-2 polypeptide of SEQ ID NO: 6
(f) the 80-1 polypeptide of SEQ ID NO: 7
(g) the eM4 polypeptide of SEQ ID NO: 5; (h) an 80 kD polypeptide comprising the polypeptide (f) ; (l) serotypic variants of any one of the polypeptides of (a) -(h);
(j) fragments comprising at least 8 amino acids taken as a block from any one of the polypeptides of
(a)-(ι) ; (k) a derivative of any one of the polypeptides of (a)-( ), said derivative being at least 80% identical in ammo acid sequence to the corresponding polypeptide of (a)-( );
(1) a polypeptide that is immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with any one of the polypeptides of (a)-(j);
(m) a polypeptide that is capable of eliciting antibodies that are immunologically reactive with aoHGE and any one of the polypeptides of (a)-( ); and (n) a polypeptide that is immunologically reactive with antibodies elicited by immunization with any one of the polypeptides of (a)-(j).
2. An isolated, recombinant or synthetic DNA molecule comprising a DNA sequence which encodes an aoHGE polypeptide, wherein said polypeptide is selected from the group consisting of: a 40 kDa, 44 kDa, 65kDa, 80 kDa, 94 kDa, 105 kDa, 110 kDa, 115 kDa, and 125 kDa polypeptide which appears as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, serotypic variants, fragments and derivatives thereof.
3. The DNA molecule according to claim 1 or claim 2, wherein said polypeptide comprises a protective epitope.
4. A DNA molecule comprising a DNA sequence encoding an fusion protein, wherein the fusion protein comprises an aoHGE polypeptide encoded by a DNA molecule according to any one of claims 1, 2 or 40.
5 A DNA molecule comprising a DNA sequence encoding a multimeric protein, which multimeric protein comprises an aoHGE polypeptide encoded by a DNA molecule according to any one of claims 1, 2 or 40.
6. An expression vector comprising a DNA molecule according to any one of claims 1-5.
7. A host cell transformed with a DNA molecule according to any one of claims 1-5.
8. The host cell according to claim 7, wherein said DNA molecule is integrated into the genome of said host cell.
9. The host cell according to claim 7 or 8, wherein said host cell is selected from the group consisting of: strains of E. coli ; Pseudomonas, Bacill us; Streptomyces; yeast, fungi; animal cells, including human cells in tissue culture; plant cells; and insect cells.
10. A polypeptide encoded by a DNA molecule according to any one of claims 1-5.
11. A method for producing a polypeptide according to claim 10, comprising the step of culturing a host cell according to any one of claims 7-9.
12. An aoHGE polypeptide selected from the group consisting of:
(b) the E6 polypeptide of SEQ ID NO: 2; (b) the E7 polypeptide of SEQ ID NO: 4;
(c) the 44-kDa polypeptide of SEQ ID NO 11;
(d) the 44-1 polypeptide of SEQ ID NO: 5
(e) the 44-2 polypeptide of SEQ ID NO: 6
(f) the 80-1 polypeptide of SEQ ID NO: 7 (g) the eM4 polypeptide of SEQ ID NO: 5;
(h) an 80 kD polypeptide comprising the polypeptide (f ) ; (i) serotypic variants of any one of the polypeptides of (a) -(h);
(j) fragments comprising at least 8 amino acids taken as a block from any one of the polypeptides of (a)-(i);
(k) a derivative of any one of the polypeptides of (a)-(j), said derivative being at least 80% identical in amino acid sequence to the corresponding polypeptide of (a)-(j); (1) a polypeptide that is immunologically reactive with antibodies generated by infection of a mammalian host with aoHGE, which antibodies are immunologically reactive with any one of the polypeptides of (a)-(j); (m) a polypeptide that is capable of eliciting antibodies that are immunologically reactive with aoHGE and any one of the polypeptides of (a)-(j); and
(n) a polypeptide that is immunologically reactive with antibodies elicited by immunization with any one of the polypeptides of (a)-(j).
13. A.* aoxIGE polyppptide selected from the group consisting of: a 40 kDa, 44 kDa, 65kDa, 80 kDa, 94 kDa, 105 kDa, 110 kDa, 115 kDa, and 125 kDa polypeptide which appears as a single band on a Western blot after reacting with sera from an animal infected with aoHGE, serotypic variants, fragments and derivatives thereof.
14. The aoHGE polypeptide according to any one of claims 12, 13 or 41, wherein said polypeptide comprises a protective epitope.
15. A fusion protein comprising an aoHGE polypeptide according to any one of claims 12, 13 or 41.
16. The fusion protein according to claim 15, wherein said fusion protein comprises two or more aoHGE polypeptides, each derived from a different isolate of aoHGE .
17. A multimeric protein comprising an aoHGE polypeptide according to any one of claims 12, 13 or 41.
18. A pharmaceutical composition comprising a pharmaceutically acceptable carrier and a component selected from the group consisting of: a polypeptide according to any one of claims 12-14; a fusion protein according to claim 15 or 16 ; and a multimeric protein according to claim 17.
19. The pharmaceutical composition according to claim 18, wherein the component is crosslinked to an immunogenic carrier.
20. The pharmaceutical composition according to claim 18 or 19, further comprising at least one additional immunogenic aoHGE polypeptide.
21. The pharmaceutical composition according to claim 18 or 19, further comprising at least one additional non-aoHGE polypeptide.
22. A method for treating or preventing aoHGE infection or HGE comprising the step of administering to a subject a pharmaceutical composition according to any one of claims 18-21.
23. A diagnostic kit comprising a component selected from the group consisting of: a polypeptide according to any one of claims 12, 13 or 41; a fusion protein according to any one of claims 15 or 16; and a multimeric protein according to claim 17, and also comprising a means for detecting binding of said component to an antibody.
24. An antibody that binds to a polypeptide according to any one of claims 12, 13 or 41.
25. The antibody according to claim 24 which is polyclonal .
26. The antibody according to claim 24 which is monoclonal .
27. A diagnostic kit comprising an antibody according to any one of claims 24-26.
28. A method for detecting aoHGE infection comprising the step of contacting a body fluid of a suspected infected mammalian host with a polypeptide according to any one of claims 12, 13 or 41; a fusion protein according to claim 15 or 16; and a multimeric protein according to claim 17.
29. A pharmaceutical composition comprising an antibody according to any one of claims 24-26.
30. A vaccine comprising a polyclonal anti-aoHGE antibody.
31. A vaccine comprising a monoclonal anti-aoHGE antibody.
32. A method for detecting aoHGE infection comprising the step of contacting a body fluid of a mammalian host with an antibody according to any one of claims 24-26.
33. A method for treating or preventing aoHGE infection, comprising administering to a subject an antibody according to any one of claims 24-26, a pharmaceutical composition according to claim 29, or a vaccine according to claim 30 or 31.
34. A method for detecting the presence of aoHGE in a biological sample, comprising the step of subjecting the sample to PCR DNA analysis using a primer derived from a DNA molecule according to any one of claims 1, 2 or 40.
35. A diagnostic kit for detecting the presence of aoHGE in a sample, wherein the kit comprises a primer derived from a DNA molecule according to claim 1 or claim 2.
36. A method for detecting the presence of aoHGE in a sample, comprising the step of inoculating an infant laboratory mouse with said sample and detecting aoHGE infection in the mouse.
37. The method according to claim 36, wherein said infant mouse is no more than 5 days old.
38. The method according to claim 36, wherein said infant mouse is 1 day old.
39. An isolated, recombinant or synthetic DNA molecule comprising a DNA sequence selected from the group consisting of: the E5-3A sequence set forth in Figure 13, the E5-3B sequence set forth in Figure 14, the E5-5A sequence set forth in Figure 15, the E5-5B sequence set forth in Figure 16, and the E5-6 sequence set forth in Figure 17.
40. An isolated, recombinant or synthetic DNA molecule comprising a DNA sequence which hybridizes under stringent conditions to a DNA sequence selected from the group consisting of: the DNA sequence of SEQ ID NO: 10 and a DNA sequence according to claim 39.
41. A polypeptide encoded by a DNA molecule according to clair.. 40.
EP97909914A 1996-10-01 1997-09-30 Compositions and methods for the prevention and diagnosis of human granulocytic ehrlichiosis Withdrawn EP0932680A2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US2718096P 1996-10-01 1996-10-01
US27180P 1996-10-01
PCT/US1997/017675 WO1998014584A2 (en) 1996-10-01 1997-09-30 Compositions and methods for the prevention and diagnosis of human granulocytic ehrlichiosis

Publications (1)

Publication Number Publication Date
EP0932680A2 true EP0932680A2 (en) 1999-08-04

Family

ID=21836160

Family Applications (1)

Application Number Title Priority Date Filing Date
EP97909914A Withdrawn EP0932680A2 (en) 1996-10-01 1997-09-30 Compositions and methods for the prevention and diagnosis of human granulocytic ehrlichiosis

Country Status (5)

Country Link
EP (1) EP0932680A2 (en)
JP (1) JP2001502528A (en)
AU (1) AU4741697A (en)
CA (1) CA2268013A1 (en)
WO (1) WO1998014584A2 (en)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6207169B1 (en) 1997-03-21 2001-03-27 Corixa Corporation Compounds and methods for the diagnosis and treatment of Ehrlichia infection
US6231869B1 (en) 1997-03-21 2001-05-15 Corixa Corporation Compounds and methods for the diagnosis and treatment of ehrlichia infection
US6673356B1 (en) 1997-03-21 2004-01-06 Corixa Corporation Compounds and methods for the diagnosis and treatment of ehrlichia infection
US6277381B1 (en) * 1997-03-21 2001-08-21 Corixa Corporation Compounds and methods for the diagnosis and treatment of Ehrlichia infection
ES2330393T3 (en) * 1997-04-25 2009-12-09 Antigenics Inc. CHARACTERIZATION OF EHRLICHIA GRANULOCITICA AND METHODS OF USE.
AU3483599A (en) * 1998-04-09 1999-11-01 Ohio State Research Foundation, The Nucleic acids encoding outer membrane protein of human granulocytic ehrlichiosisagent
US7807810B2 (en) 1999-04-08 2010-10-05 The Ohio State University Research Foundation Nucleic acids encoding the major outer membrane protein of the causative agent of human granulocytic ehrlichiosis and peptides encoded thereby
WO2008137881A2 (en) 2007-05-04 2008-11-13 The Ohio State University Research Foundation Ehrlichia ewingii proteins, nucleic acids, and methods of their use
WO2012135701A2 (en) 2011-03-31 2012-10-04 The Ohio State University Compositions and methods for the detection of anaplasma platys
WO2013113000A2 (en) 2012-01-26 2013-08-01 Luc Montagnier Detection of dna sequences as risk factors for hiv infection

Also Published As

Publication number Publication date
JP2001502528A (en) 2001-02-27
CA2268013A1 (en) 1998-04-09
WO1998014584A2 (en) 1998-04-09
AU4741697A (en) 1998-04-24

Similar Documents

Publication Publication Date Title
US5747294A (en) Compositions and methods for the prevention and diagnosis of lyme disease
US6475492B1 (en) Peptides and assays for the diagnosis of lyme disease
KR102460165B1 (en) Mutant fragments of ospa and methods and uses relating thereto
US5656451A (en) OspE, OspF, and S1 polypeptides in borrelia burgdorferi
CZ280743B6 (en) Vaccine containing pc protein for preventing or treating lyme borreliosis, purification process of b burgdorferi protein, diagnostic agent for detecting b burgdorferi antobodies and method of detecting presence of b burgdorferi antibodies in body liquid
CA2294701C (en) Surface antigens and proteins useful in compositions for the diagnosis and prevention of lyme disease
CA2077434C (en) Antigenic proteins of borrelia burgdorferi
WO1998014584A2 (en) Compositions and methods for the prevention and diagnosis of human granulocytic ehrlichiosis
CA2112466A1 (en) Methods and compositions for diagnosing lyme disease
KR20130125771A (en) Polyvalent chimeric ospc vaccinogen and diagnostic antigen
CA2501939C (en) Novel immunogenic proteins of leptospira
US5780041A (en) 39-kilodalton antigen specific to Borrelia burgdorferi
ES2203704T3 (en) LEPTOSPIRA MEMBRANE PROTEINS.
AU8154801A (en) Compositions and methods for the prevention and diagnosis of human granulocytic enrlichiosis
US6716591B1 (en) B. burgdorferi polypeptides
WO1997042325A1 (en) B. burgdorferi polypeptides expressed in vivo
CA2288433A1 (en) Compositions and methods for conferring tick immunity and preventing tick borne diseases
AU645078C (en) Antigenic proteins of (borrelia burgdorferi)
AU4392093A (en) Compositions useful in diagnosis and prophylaxis of lyme disease
CZ462199A3 (en) Surface antigens and proteins usable in preparations for diagnosis and prevention of Lyme borreliosis

Legal Events

Date Code Title Description
PUAI Public reference made under article 153(3) epc to a published international application that has entered the european phase

Free format text: ORIGINAL CODE: 0009012

17P Request for examination filed

Effective date: 19990428

AK Designated contracting states

Kind code of ref document: A2

Designated state(s): AT BE CH DE DK ES FI FR GB GR IE IT LI LU MC NL PT SE

RIN1 Information on inventor provided before grant (corrected)

Inventor name: SUN, WEI

Inventor name: IJDO, JACOB

Inventor name: BARTHOLD, STEPHEN, W.

Inventor name: FIKRIG, EROL

STAA Information on the status of an ep patent application or granted ep patent

Free format text: STATUS: THE APPLICATION HAS BEEN WITHDRAWN

18W Application withdrawn

Effective date: 20030707

REG Reference to a national code

Ref country code: HK

Ref legal event code: WD

Ref document number: 1021647

Country of ref document: HK