DK3215616T3 - Reducering af DNA-skade under prøvepræparering og sekventering ved anvendelse af siderophor-chelatorer - Google Patents
Reducering af DNA-skade under prøvepræparering og sekventering ved anvendelse af siderophor-chelatorer Download PDFInfo
- Publication number
- DK3215616T3 DK3215616T3 DK15790422.8T DK15790422T DK3215616T3 DK 3215616 T3 DK3215616 T3 DK 3215616T3 DK 15790422 T DK15790422 T DK 15790422T DK 3215616 T3 DK3215616 T3 DK 3215616T3
- Authority
- DK
- Denmark
- Prior art keywords
- siderophore
- chelators
- sequencing
- sample preparation
- dna damage
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1093—General methods of preparing gene libraries, not provided for in other subgroups
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Genetics & Genomics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Molecular Biology (AREA)
- General Health & Medical Sciences (AREA)
- Biophysics (AREA)
- Physics & Mathematics (AREA)
- Immunology (AREA)
- Biomedical Technology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Plant Pathology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Bioinformatics & Computational Biology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201462075708P | 2014-11-05 | 2014-11-05 | |
| PCT/US2015/057409 WO2016073237A1 (en) | 2014-11-05 | 2015-10-26 | Reducing dna damage during sample preparation and sequencing using siderophore chelators |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| DK3215616T3 true DK3215616T3 (da) | 2020-03-02 |
Family
ID=54427892
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DK15790422.8T DK3215616T3 (da) | 2014-11-05 | 2015-10-26 | Reducering af DNA-skade under prøvepræparering og sekventering ved anvendelse af siderophor-chelatorer |
Country Status (6)
| Country | Link |
|---|---|
| US (2) | US9828627B2 (da) |
| EP (1) | EP3215616B1 (da) |
| CN (1) | CN107250358B (da) |
| DK (1) | DK3215616T3 (da) |
| ES (1) | ES2768762T3 (da) |
| WO (1) | WO2016073237A1 (da) |
Families Citing this family (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP3826646A4 (en) * | 2018-07-25 | 2022-07-27 | Convergent Genomics, Inc. | URINARY MICROBIOMIC PROFILING |
| AU2019364545A1 (en) * | 2018-10-26 | 2021-04-29 | Illumina, Inc. | Modulating polymer beads for DNA processing |
| WO2021224677A1 (en) | 2020-05-05 | 2021-11-11 | Akershus Universitetssykehus Hf | Compositions and methods for characterizing bowel cancer |
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| WO1991006678A1 (en) | 1989-10-26 | 1991-05-16 | Sri International | Dna sequencing |
| US5846719A (en) | 1994-10-13 | 1998-12-08 | Lynx Therapeutics, Inc. | Oligonucleotide tags for sorting and identification |
| US5750341A (en) | 1995-04-17 | 1998-05-12 | Lynx Therapeutics, Inc. | DNA sequencing by parallel oligonucleotide extensions |
| JP3996639B2 (ja) * | 1995-06-07 | 2007-10-24 | ジェン−プローブ・インコーポレーテッド | 生成物の増幅後レベルから核酸標的配列の増幅前レベルを決定するための方法とキット |
| GB9620209D0 (en) | 1996-09-27 | 1996-11-13 | Cemu Bioteknik Ab | Method of sequencing DNA |
| GB9626815D0 (en) | 1996-12-23 | 1997-02-12 | Cemu Bioteknik Ab | Method of sequencing DNA |
| ES2563643T3 (es) | 1997-04-01 | 2016-03-15 | Illumina Cambridge Limited | Método de secuenciación de ácido nucleico |
| US6969488B2 (en) | 1998-05-22 | 2005-11-29 | Solexa, Inc. | System and apparatus for sequential processing of analytes |
| AU762728B2 (en) | 1998-07-02 | 2003-07-03 | Gen-Probe Incorporated | Molecular torches |
| US6274320B1 (en) | 1999-09-16 | 2001-08-14 | Curagen Corporation | Method of sequencing a nucleic acid |
| US7001792B2 (en) | 2000-04-24 | 2006-02-21 | Eagle Research & Development, Llc | Ultra-fast nucleic acid sequencing device and a method for making and using the same |
| ATE377093T1 (de) | 2000-07-07 | 2007-11-15 | Visigen Biotechnologies Inc | Sequenzbestimmung in echtzeit |
| WO2002044425A2 (en) | 2000-12-01 | 2002-06-06 | Visigen Biotechnologies, Inc. | Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity |
| AU2002241154A1 (en) * | 2001-03-21 | 2002-10-03 | Isis Innovation Ltd. | Assays, methods and means relating to hypoxia inducible factor (hif) hydroxylase |
| GB0127564D0 (en) | 2001-11-16 | 2002-01-09 | Medical Res Council | Emulsion compositions |
| US7057026B2 (en) | 2001-12-04 | 2006-06-06 | Solexa Limited | Labelled nucleotides |
| ES2550513T3 (es) | 2002-08-23 | 2015-11-10 | Illumina Cambridge Limited | Nucleótidos modificados para secuenciación de polinucleótidos |
| AU2004209001B2 (en) | 2003-01-29 | 2007-10-11 | 454 Life Sciences Corporation | Bead emulsion nucleic acid amplification |
| WO2005010145A2 (en) | 2003-07-05 | 2005-02-03 | The Johns Hopkins University | Method and compositions for detection and enumeration of genetic variations |
| GB0321306D0 (en) | 2003-09-11 | 2003-10-15 | Solexa Ltd | Modified polymerases for improved incorporation of nucleotide analogues |
| ES2949821T3 (es) | 2004-01-07 | 2023-10-03 | Illumina Cambridge Ltd | Matrices moleculares |
| US7476503B2 (en) | 2004-09-17 | 2009-01-13 | Pacific Biosciences Of California, Inc. | Apparatus and method for performing nucleic acid analysis |
| US20100111856A1 (en) * | 2004-09-23 | 2010-05-06 | Herman Gill | Zirconium-radiolabeled, cysteine engineered antibody conjugates |
| WO2006064199A1 (en) | 2004-12-13 | 2006-06-22 | Solexa Limited | Improved method of nucleotide detection |
| AU2006212738B2 (en) * | 2005-02-09 | 2012-04-05 | Mitotek, Llc | Compositions and methods for inhibiting an isoform of human manganese superoxide dismutase |
| US8623628B2 (en) | 2005-05-10 | 2014-01-07 | Illumina, Inc. | Polymerases |
| US8445194B2 (en) | 2005-06-15 | 2013-05-21 | Callida Genomics, Inc. | Single molecule arrays for genetic and chemical analysis |
| GB0514936D0 (en) | 2005-07-20 | 2005-08-24 | Solexa Ltd | Preparation of templates for nucleic acid sequencing |
| US7405281B2 (en) | 2005-09-29 | 2008-07-29 | Pacific Biosciences Of California, Inc. | Fluorescent nucleotide analogs and uses therefor |
| WO2007123744A2 (en) | 2006-03-31 | 2007-11-01 | Solexa, Inc. | Systems and devices for sequence by synthesis analysis |
| WO2008051530A2 (en) | 2006-10-23 | 2008-05-02 | Pacific Biosciences Of California, Inc. | Polymerase enzymes and reagents for enhanced nucleic acid sequencing |
| US7521213B2 (en) * | 2006-12-01 | 2009-04-21 | Quest Diagnostics Investments Incorporated | Sample processing for nucleic acid amplification |
| US8349167B2 (en) | 2006-12-14 | 2013-01-08 | Life Technologies Corporation | Methods and apparatus for detecting molecular interactions using FET arrays |
| EP2639579B1 (en) | 2006-12-14 | 2016-11-16 | Life Technologies Corporation | Apparatus for measuring analytes using large scale FET arrays |
| US8262900B2 (en) | 2006-12-14 | 2012-09-11 | Life Technologies Corporation | Methods and apparatus for measuring analytes using large scale FET arrays |
| AU2008256216B2 (en) * | 2007-06-01 | 2014-07-31 | Council Of Scientific & Industrial Research | A novel method for simultaneous detection and discrimination of bacterial, fungal, parasitic and viral infections of eye and central nervous system |
| US9598737B2 (en) * | 2012-05-09 | 2017-03-21 | Longhorn Vaccines And Diagnostics, Llc | Next generation genomic sequencing methods |
| US8492158B2 (en) | 2008-03-31 | 2013-07-23 | Applied Biosystems, Llc | Electrochemical labels derived from siderophores |
| US20100137143A1 (en) | 2008-10-22 | 2010-06-03 | Ion Torrent Systems Incorporated | Methods and apparatus for measuring analytes |
| US20120183531A1 (en) * | 2009-07-14 | 2012-07-19 | Biogen Idee Ma Inc | Methods for Inhibiting Yellow Color Formation in a Composition |
| US8841075B1 (en) * | 2010-04-13 | 2014-09-23 | Cleveland State University | Homologous pairing capture assay and related methods and applications |
| EP2614155A1 (en) * | 2010-09-10 | 2013-07-17 | Inserm | Method for detecting the presence of bacterial strains resistant to antibiotics in a biological sample |
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| MX337140B (es) | 2012-04-03 | 2016-02-12 | Illumina Inc | Cabazal integrado de lectura optoelectrónica y cartucho fluído útil para secuenciación de ácidos nucleicos. |
| US9763899B2 (en) * | 2012-08-30 | 2017-09-19 | The Board Of Trustees Of The Leland Stanford Junior University | Iron chelators and use thereof for reducing transplant failure during rejection episodes |
| US9683230B2 (en) | 2013-01-09 | 2017-06-20 | Illumina Cambridge Limited | Sample preparation on a solid support |
| JP2016530500A (ja) * | 2013-07-01 | 2016-09-29 | イクセラ，インコーポレイテッド | システム生物学的アプローチによる療法 |
| US20160024559A1 (en) * | 2014-07-24 | 2016-01-28 | The Bode Technology Group, Inc. | Specimen collection with reagent lined collectors |
-
2015
- 2015-10-26 DK DK15790422.8T patent/DK3215616T3/da active
- 2015-10-26 EP EP15790422.8A patent/EP3215616B1/en active Active
- 2015-10-26 WO PCT/US2015/057409 patent/WO2016073237A1/en active Application Filing
- 2015-10-26 US US14/923,319 patent/US9828627B2/en active Active
- 2015-10-26 ES ES15790422T patent/ES2768762T3/es active Active
- 2015-10-26 CN CN201580070229.5A patent/CN107250358B/zh active Active
-
2017
- 2017-10-19 US US15/787,968 patent/US10724075B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| WO2016073237A1 (en) | 2016-05-12 |
| CN107250358B (zh) | 2021-03-30 |
| CN107250358A (zh) | 2017-10-13 |
| US20180051323A1 (en) | 2018-02-22 |
| EP3215616B1 (en) | 2019-12-18 |
| US10724075B2 (en) | 2020-07-28 |
| EP3215616A1 (en) | 2017-09-13 |
| US20160122804A1 (en) | 2016-05-05 |
| US9828627B2 (en) | 2017-11-28 |
| ES2768762T3 (es) | 2020-06-23 |
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