DE69736995D1 - Crystallizable compositions containing a complex of hepatitis C virus protease domain NS3 and NS4A and crystals provided therewith - Google Patents
Crystallizable compositions containing a complex of hepatitis C virus protease domain NS3 and NS4A and crystals provided therewithInfo
- Publication number
- DE69736995D1 DE69736995D1 DE69736995T DE69736995T DE69736995D1 DE 69736995 D1 DE69736995 D1 DE 69736995D1 DE 69736995 T DE69736995 T DE 69736995T DE 69736995 T DE69736995 T DE 69736995T DE 69736995 D1 DE69736995 D1 DE 69736995D1
- Authority
- DE
- Germany
- Prior art keywords
- hepatitis
- complex
- ns4a
- virus protease
- compositions containing
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/576—Immunoassay; Biospecific binding assay; Materials therefor for hepatitis
- G01N33/5767—Immunoassay; Biospecific binding assay; Materials therefor for hepatitis non-A, non-B hepatitis
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/005—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
-
- C—CHEMISTRY; METALLURGY
- C30—CRYSTAL GROWTH
- C30B—SINGLE-CRYSTAL GROWTH; UNIDIRECTIONAL SOLIDIFICATION OF EUTECTIC MATERIAL OR UNIDIRECTIONAL DEMIXING OF EUTECTOID MATERIAL; REFINING BY ZONE-MELTING OF MATERIAL; PRODUCTION OF A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; SINGLE CRYSTALS OR HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; AFTER-TREATMENT OF SINGLE CRYSTALS OR A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; APPARATUS THEREFOR
- C30B29/00—Single crystals or homogeneous polycrystalline material with defined structure characterised by the material or by their shape
- C30B29/54—Organic compounds
- C30B29/58—Macromolecular compounds
-
- C—CHEMISTRY; METALLURGY
- C30—CRYSTAL GROWTH
- C30B—SINGLE-CRYSTAL GROWTH; UNIDIRECTIONAL SOLIDIFICATION OF EUTECTIC MATERIAL OR UNIDIRECTIONAL DEMIXING OF EUTECTOID MATERIAL; REFINING BY ZONE-MELTING OF MATERIAL; PRODUCTION OF A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; SINGLE CRYSTALS OR HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; AFTER-TREATMENT OF SINGLE CRYSTALS OR A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; APPARATUS THEREFOR
- C30B7/00—Single-crystal growth from solutions using solvents which are liquid at normal temperature, e.g. aqueous solutions
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B15/00—ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
- G16B15/30—Drug targeting using structural data; Docking or binding prediction
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2299/00—Coordinates from 3D structures of peptides, e.g. proteins or enzymes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2770/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssRNA viruses positive-sense
- C12N2770/00011—Details
- C12N2770/24011—Flaviviridae
- C12N2770/24211—Hepacivirus, e.g. hepatitis C virus, hepatitis G virus
- C12N2770/24222—New viral proteins or individual genes, new structural or functional aspects of known viral proteins or genes
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2333/00—Assays involving biological materials from specific organisms or of a specific nature
- G01N2333/005—Assays involving biological materials from specific organisms or of a specific nature from viruses
- G01N2333/08—RNA viruses
- G01N2333/18—Togaviridae; Flaviviridae
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B15/00—ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
Landscapes
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- General Health & Medical Sciences (AREA)
- Medicinal Chemistry (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Immunology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Biochemistry (AREA)
- Biophysics (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Urology & Nephrology (AREA)
- Biotechnology (AREA)
- Hematology (AREA)
- Materials Engineering (AREA)
- Metallurgy (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Biomedical Technology (AREA)
- Pharmacology & Pharmacy (AREA)
- Evolutionary Biology (AREA)
- Cell Biology (AREA)
- Theoretical Computer Science (AREA)
- Microbiology (AREA)
- Medical Informatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Food Science & Technology (AREA)
- Analytical Chemistry (AREA)
- Communicable Diseases (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Virology (AREA)
- Gastroenterology & Hepatology (AREA)
- Genetics & Genomics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Peptides Or Proteins (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
The present invention relates to compositions and crystals of a hepatitis C virus protease in complex with its viral cofactor. This invention also relates to methods of using the structure coordinates of hepatitis C virus protease in complex with a synthetic NS4A to solve the structure of similar or homologous proteins or protein complexes.
Applications Claiming Priority (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US2527496P | 1996-09-12 | 1996-09-12 | |
US25274P | 1996-09-12 | ||
US731336 | 1996-10-18 | ||
US08/731,336 US6153579A (en) | 1996-09-12 | 1996-10-18 | Crystallizable compositions comprising a hepatitis C virus NS3 protease domain/NS4A complex |
Publications (2)
Publication Number | Publication Date |
---|---|
DE69736995D1 true DE69736995D1 (en) | 2007-01-04 |
DE69736995T2 DE69736995T2 (en) | 2007-09-20 |
Family
ID=26699520
Family Applications (3)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
DE69736995T Expired - Lifetime DE69736995T2 (en) | 1996-09-12 | 1997-09-12 | Crystallizable compositions containing a complex of hepatitis C virus protease domain NS3 and NS4A and crystals provided therewith |
DE69723485T Expired - Lifetime DE69723485T2 (en) | 1996-09-12 | 1997-09-12 | Method for identifying active substances against HCV using structural coordinates of the hepatitis C virus protease |
DE69712085T Expired - Lifetime DE69712085T2 (en) | 1996-09-12 | 1997-09-12 | CRYSTALLIZABLE COMPOSITIONS CONTAINING A COMPLEX OF PROTEIN DOMAIN NS3 FROM THE VIRUS OF HEPATITIS C AND NS4A, AND CRYSTALS PROVIDED THEREFORE |
Family Applications After (2)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
DE69723485T Expired - Lifetime DE69723485T2 (en) | 1996-09-12 | 1997-09-12 | Method for identifying active substances against HCV using structural coordinates of the hepatitis C virus protease |
DE69712085T Expired - Lifetime DE69712085T2 (en) | 1996-09-12 | 1997-09-12 | CRYSTALLIZABLE COMPOSITIONS CONTAINING A COMPLEX OF PROTEIN DOMAIN NS3 FROM THE VIRUS OF HEPATITIS C AND NS4A, AND CRYSTALS PROVIDED THEREFORE |
Country Status (13)
Country | Link |
---|---|
US (2) | US6153579A (en) |
EP (1) | EP0935609B1 (en) |
JP (1) | JP2001501602A (en) |
AT (3) | ATE346088T1 (en) |
AU (1) | AU736857B2 (en) |
CA (1) | CA2264964A1 (en) |
DE (3) | DE69736995T2 (en) |
DK (1) | DK0935609T3 (en) |
ES (2) | ES2175462T3 (en) |
HK (2) | HK1038573A1 (en) |
IL (1) | IL128826A0 (en) |
PT (2) | PT935609E (en) |
WO (1) | WO1998011134A1 (en) |
Families Citing this family (28)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
HU227742B1 (en) | 1996-10-18 | 2012-02-28 | Vertex Pharma | Inhibitors of serine proteases, particularly hepatitis c virus ns3 protease |
CA2359971A1 (en) | 1999-01-08 | 2000-07-13 | Bristol-Myers Squibb Company | Modified forms of hepatitis c virus ns3 protease |
US6524589B1 (en) * | 1999-04-08 | 2003-02-25 | Schering Corporation | Compositions of hepatitis C virus NS3/NS4A complex and methods for crystallizing same |
EP1222459A4 (en) | 1999-10-14 | 2003-01-22 | Bristol Myers Squibb Co | Crystallographic structure of the androgen receptor ligand binding domain |
US7491808B2 (en) | 2000-06-15 | 2009-02-17 | Novartis Vaccines And Diagnostics, Inc. | HCV non-structural protein mutants and uses thereof |
SV2003000617A (en) | 2000-08-31 | 2003-01-13 | Lilly Co Eli | INHIBITORS OF PROTEASA PEPTIDOMIMETICA REF. X-14912M |
CA2429179A1 (en) | 2000-11-14 | 2002-06-23 | Bristol-Myers Squibb Company | Polynucleotide encoding a novel human serpin secreted from lymphoid cells lsi-01 |
AU2002303218A1 (en) | 2001-04-03 | 2002-11-11 | Bristol-Myers Squibb Company | Polynucleotide encoding a novel cysteine protease of the calpain superfamily, can-12, and variants thereof |
US20030027315A1 (en) * | 2001-09-24 | 2003-02-06 | Ada Yonath | Methods of growing crystals of free and antibiotic complexed large ribosomal subunits, and methods of rationally designing or identifying antibiotics using structure coordinate data derived from such crystals |
WO2005000308A2 (en) * | 2003-05-15 | 2005-01-06 | Rigel Pharmaceuticals, Inc. | Methods of identifying hcv ns5b polymerase inhibitors and use against hepatitis c |
UY28500A1 (en) | 2003-09-05 | 2005-04-29 | Vertex Pharma | INHIBITORS OF SERINE PROTEASES, IN PARTICULAR PROTEASA NS3-NS4A HCV. |
WO2005043118A2 (en) | 2003-10-27 | 2005-05-12 | Vertex Pharmaceuticals Incorporated | Drug discovery method |
CN1894276B (en) | 2003-10-27 | 2010-06-16 | 威特克斯医药股份有限公司 | HCV NS3-NS4A protease resistance mutants |
US8399615B2 (en) | 2005-08-19 | 2013-03-19 | Vertex Pharmaceuticals Incorporated | Processes and intermediates |
US7964624B1 (en) | 2005-08-26 | 2011-06-21 | Vertex Pharmaceuticals Incorporated | Inhibitors of serine proteases |
AR055395A1 (en) | 2005-08-26 | 2007-08-22 | Vertex Pharma | INHIBITING COMPOUNDS OF THE ACTIVITY OF SERINA PROTEASA NS3-NS4A OF HEPATITIS C VIRUS |
US7705138B2 (en) | 2005-11-11 | 2010-04-27 | Vertex Pharmaceuticals Incorporated | Hepatitis C virus variants |
EP2392590A3 (en) | 2005-11-11 | 2012-03-14 | Vertex Pharmaceuticals Incorporated | Hepatitis C virus variants |
EP1991229A2 (en) | 2006-02-27 | 2008-11-19 | Vertex Pharmaceuticals Incorporated | Co-crystals and pharmaceutical compositions comprising the same |
MX2008011868A (en) * | 2006-03-16 | 2008-12-15 | Vertex Pharma | Deuterated hepatitis c protease inhibitors. |
US8440443B1 (en) | 2006-05-16 | 2013-05-14 | Merck Sharp & Dohme Corp. | MEK1 polypeptides |
EP2463285A1 (en) | 2007-02-27 | 2012-06-13 | Vertex Pharmaceuticals Inc. | Co-crystals and pharmaceutical compositions comprising the same |
CA2679426A1 (en) | 2007-02-27 | 2008-09-04 | Luc Farmer | Inhibitors of serine proteases |
MX2010002407A (en) | 2007-08-30 | 2010-03-26 | Vertex Pharma | Co-crystals and pharmaceutical compositions comprising the same. |
US8988881B2 (en) * | 2007-12-18 | 2015-03-24 | Sandia Corporation | Heat exchanger device and method for heat removal or transfer |
US9005417B1 (en) | 2008-10-01 | 2015-04-14 | Sandia Corporation | Devices, systems, and methods for microscale isoelectric fractionation |
US9795961B1 (en) | 2010-07-08 | 2017-10-24 | National Technology & Engineering Solutions Of Sandia, Llc | Devices, systems, and methods for detecting nucleic acids using sedimentation |
US9261100B2 (en) | 2010-08-13 | 2016-02-16 | Sandia Corporation | Axial flow heat exchanger devices and methods for heat transfer using axial flow devices |
Family Cites Families (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US4833233A (en) * | 1987-08-20 | 1989-05-23 | The United States Of America As Represented By The Administrator Of The National Aeronautics And Space Administration | Human serum albumin crystals and method of preparation |
US5353236A (en) * | 1992-04-23 | 1994-10-04 | The Board Of Trustees Of The Leland Stanford University | High-resolution crystallographic modelling of a macromolecule |
US5453937A (en) * | 1993-04-28 | 1995-09-26 | Immunex Corporation | Method and system for protein modeling |
IT1272179B (en) * | 1994-02-23 | 1997-06-16 | Angeletti P Ist Richerche Bio | METHODOLOGY TO REPRODUCE IN VITRO THE PROTEOLITHIC ACTIVITY OF THE NS3 PROTEASE OF THE VIRUS HCV. |
-
1996
- 1996-10-18 US US08/731,336 patent/US6153579A/en not_active Expired - Lifetime
-
1997
- 1997-09-12 PT PT97942450T patent/PT935609E/en unknown
- 1997-09-12 DK DK97942450T patent/DK0935609T3/en active
- 1997-09-12 IL IL12882697A patent/IL128826A0/en unknown
- 1997-09-12 DE DE69736995T patent/DE69736995T2/en not_active Expired - Lifetime
- 1997-09-12 EP EP97942450A patent/EP0935609B1/en not_active Expired - Lifetime
- 1997-09-12 DE DE69723485T patent/DE69723485T2/en not_active Expired - Lifetime
- 1997-09-12 PT PT01101009T patent/PT1118619E/en unknown
- 1997-09-12 JP JP10513899A patent/JP2001501602A/en not_active Ceased
- 1997-09-12 WO PCT/US1997/016182 patent/WO1998011134A1/en active IP Right Grant
- 1997-09-12 ES ES97942450T patent/ES2175462T3/en not_active Expired - Lifetime
- 1997-09-12 AU AU44145/97A patent/AU736857B2/en not_active Ceased
- 1997-09-12 DE DE69712085T patent/DE69712085T2/en not_active Expired - Lifetime
- 1997-09-12 AT AT03015398T patent/ATE346088T1/en not_active IP Right Cessation
- 1997-09-12 CA CA002264964A patent/CA2264964A1/en not_active Abandoned
- 1997-09-12 AT AT97942450T patent/ATE216400T1/en not_active IP Right Cessation
- 1997-09-12 ES ES01101009T patent/ES2202228T3/en not_active Expired - Lifetime
- 1997-09-12 AT AT01101009T patent/ATE244729T1/en not_active IP Right Cessation
-
1999
- 1999-02-25 US US09/257,667 patent/US6303287B1/en not_active Expired - Lifetime
-
2000
- 2000-02-17 HK HK01108615A patent/HK1038573A1/en not_active IP Right Cessation
- 2000-02-17 HK HK00100944A patent/HK1022700A1/en not_active IP Right Cessation
Also Published As
Publication number | Publication date |
---|---|
DE69712085T2 (en) | 2002-11-28 |
US6303287B1 (en) | 2001-10-16 |
ATE244729T1 (en) | 2003-07-15 |
PT1118619E (en) | 2003-11-28 |
AU736857B2 (en) | 2001-08-02 |
ATE216400T1 (en) | 2002-05-15 |
IL128826A0 (en) | 2000-01-31 |
ES2202228T3 (en) | 2004-04-01 |
DE69723485D1 (en) | 2003-08-14 |
ATE346088T1 (en) | 2006-12-15 |
AU4414597A (en) | 1998-04-02 |
HK1022700A1 (en) | 2000-08-18 |
ES2175462T3 (en) | 2002-11-16 |
WO1998011134A1 (en) | 1998-03-19 |
PT935609E (en) | 2002-09-30 |
EP0935609B1 (en) | 2002-04-17 |
DE69712085D1 (en) | 2002-05-23 |
EP0935609A1 (en) | 1999-08-18 |
DE69736995T2 (en) | 2007-09-20 |
US6153579A (en) | 2000-11-28 |
CA2264964A1 (en) | 1998-03-19 |
JP2001501602A (en) | 2001-02-06 |
DK0935609T3 (en) | 2002-07-22 |
HK1038573A1 (en) | 2002-03-22 |
DE69723485T2 (en) | 2004-05-27 |
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Legal Events
Date | Code | Title | Description |
---|---|---|---|
8364 | No opposition during term of opposition |