CN1824777A - Human g-protein coupled receptor - Google Patents

Human g-protein coupled receptor Download PDF

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CN1824777A
CN1824777A CN 200510092639 CN200510092639A CN1824777A CN 1824777 A CN1824777 A CN 1824777A CN 200510092639 CN200510092639 CN 200510092639 CN 200510092639 A CN200510092639 A CN 200510092639A CN 1824777 A CN1824777 A CN 1824777A
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seq
neuromedin
igs4
leu
polypeptide
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W·德里尔斯尼德尔
C·比戈尔
C·劳肯
G·尼斯
J·维尼玛
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Abbott Products GmbH
Abbott Healthcare Products BV
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Solvay Pharmaceuticals GmbH
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Abstract

The polynucleotides and polypeptides of the present invention relate to the G- protein coupled receptor family, referred to as IGS4-family. The invention also relates to inhibiting or activating the action of such polynucleotides and polypeptides, to a vector containing said polynucleotides, a host cell containing such vector and transgenic animals where the IGS4-gene is either overexpressed, misexpressed, underexpressed or suppressed (knock-out animals ). The invention further relates to a method for screening compounds capable to act as an agonist or an antagonist of IGS4-family and the use of such IGS4 polypeptides, polynucleotides, agonists or antagonists. Preferred uses of th e invention relate to disorders of the nervous system, disorders of the gastrointestinal system and/or of the cardiovascular system and/or of skelet al muscle and/or of the thyroid, and/or also to lung diseases, immunological diseases and disorders of the genitourinary system. The invention also relat es to the identification of the cognate ligand of the IGS4 polypeptides the neuropeptides known as neuromedin U.

Description

New human G protein-coupled receptor
Describe
The new polynucleotides that the present invention relates to identify, by the purposes and the production thereof of their encoded polypeptides and these polynucleotide and polypeptide.In particular, polynucleotide of the present invention and polypeptide relate to g protein coupled receptor (G-protein coupled receptor, GPCR), IGS4 hereinafter referred to as.IGS4 exists two kinds of polymorphism forms, hereinafter referred to as IGS4A and IGS4B.The invention still further relates to the effect that suppresses or activate these polynucleotide and polypeptide, the transgenic animal that comprise the carrier of described polynucleotide, the host cell that comprises this carrier and the overexpression of IGS4 gene, false demonstration, expression deficiency or be subjected to containment (knock-out animal).The invention still further relates to that be used to screen can be as the method for the compound of the agonist of described g protein coupled receptor IGS4 or antagonist, and the associated ligands of IGS4.
Background of invention
Prove fully that many biological procedureses with medical importance are (Lefkowitz, nature (Nature) 51:353-354,1991) by the protein mediation of the signal transduction pathway that participates in relating to G albumen and/or second messenger (as cAMP).In this article, these protein are called the protein that participates in G albumen approach.These proteinic examples comprise gpc receptor, such as the acceptor of adrenergic reagent and Dopamine HCL (people such as B.K.Kobilka, progress (Proc.Natl.Acad.Sci.USA) 84:46-50 of NAS, 1987; People such as B.K.Kobilka, science (Science) 238:650-656,1987; People such as J.R.Bunzow, nature (Nature) 336:783-787,1988); G albumen self; Effect protein is as Phospholipase C, adenylate cyclase and phosphodiesterase; With actuate albumen (actuatorprotein), as protein kinase A and protein kinase C (people such as M.I.Simon, science (Science) 252:802-808,1991).
For example, in a kind of form of signal transduction, after hormone is in conjunction with GPCR, acceptor and heterotrimeric G protein-interacting, and induce GDP to disintegrate down by the guanylic acid binding site.In the normal cell concentration of guanylic acid, GTP fills this site immediately.GTP causes that with combining of G protein alpha subunit dissociating of G albumen and acceptor and G albumen are dissociated into α and β γ subunit.Then, carry the form of GTP in conjunction with the adenylate cyclase after activating.Become GDP by G albumen self (the α subunit has intrinsic GTP enzymic activity) catalysis GTP hydrolysis, make G albumen recover its basic inactive form.The GTP enzymic activity of α subunit is the Internal clocks of control ON/OFF conversion in essence.The α subunit has high-affinity in conjunction with the form of GDP to β γ, and α GDP makes the system recovery base state with combining once more of β γ subsequently.So, G albumen plays dual function: both as intermediate, signal is passed to effector (being adenylate cyclase) by acceptor in this example; Again as clock, the time length of control signal.
Identify that the film mating type superfamily of g protein coupled receptor has 7 membrane spaning domains of inferring.Think that these structural domains are transmembrane spanninges outer by born of the same parents or that the kytoplasm ring connects together.G protein coupled receptor comprises biologic activity acceptor widely, such as hormone, virus, somatomedin and neuroreceptor.
G protein coupled receptor family comprises Dopamine Receptors, and they are in conjunction with the psychosis that is used for the treatment of the CNS disorder.Other example of this family member includes but not limited to thyrocalcitonin, adrenergic, neuropeptide tyrosine, somatostatin, neurotensin, neurokinin, capsaicine, VIP, CGRP, CRF, CCK, bradykinin, galanin (galanin), motilin, nociceptin, endothelin, cAMP, adenosine, muscarine, vagusstoff, serotonin, histamine, zymoplasm, kassinin kinin, follicle stimulating hormone, opsin, endothelial differentiation gene-1, look purple matter, taste-additive (odorant), acceptor with cytomegalovirus.
Most of g protein coupled receptors all have single conservative cysteine residues in preceding two born of the same parents' outer shrouds, think that disulfide linkage that their form stablized the structure of functional protein.Stride film district called after TM1, TM2, TM3, TM4, TM5, TM6 and TM7 for 7.The kytoplasm ring that connects TM5 and TM6 may be the main component of G protein binding structural domain.
Most of g protein coupled receptors comprise the potential phosphorylation site at the 3rd kytoplasm ring and/or C-terminal.For several g protein coupled receptors, such as receptor,, the desensitization of the phosphorylation mediation acceptor that is undertaken by protein kinase A and/or special receptor kinase.
Recent findings, some GPCR as Calcitonin Receptor sample acceptor, may interact with the small-sized single membrane-spanning protein that is called receptor active modified protein (RAMP).Which kind of native ligand GPCR and this interaction of certain RAMP have determined GPCR-RAMP is united function signal activity with relevant avidity and regulatory complex people such as (, nature (Nature) 393:333-339,1998) L.M.McLathie.
For some acceptor, think that the ligand-binding site point of g protein coupled receptor comprises the hydrophilic groove that the several membrane spaning domains by g protein coupled receptor form, this groove is centered on by the hydrophobic residue of g protein coupled receptor.The water-wet side of each transbilayer helix of inferring g protein coupled receptor is towards the inboard, and is formed with polar ligand-binding site point.In several g protein coupled receptors, TM3 relates to the ligand-binding site point, such as the TM3 asparagicacid residue.Phenylalanine or the tyrosine of the Serine of TM5, TM6 l-asparagine and TM6 or TM7 also relate to the part combination.
G protein coupled receptor can be by the multiple intracellular enzyme of heterotrimeric G albumen coupling, ionic channel and translocator (consult people such as Johnson, (Endoc.Rev.) 10:317-331,1989 be looked back in internal secretion) in cell.Different G protein alpha subunits is preferential to stimulate specific effector, thus the various biological function in the regulating cell.Identify that the phosphorylation of g protein coupled receptor kytoplasm residue is the important mechanisms of some g protein coupled receptor of regulation and control G albumen coupling.Found g protein coupled receptor at the intravital many positions of mammalian hosts.
In known drug, surpass half and produce by acceptor, mainly be GPCR class (Drews, Nature Biotechnol (Nature Biotechnology) 14:1516,1996).This illustrates that these acceptors have historic records verified, through checking as the treatment target.Obviously, need evaluation and sign to can be used for prevention, improve, or other acceptor of correct functioning disorder or disease, include but not limited to the PNS disorder, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome, twitch, tremble dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia.
Summary of the invention
One aspect of the present invention relates to IGS4 polypeptide (comprising IGS4A and IGS4B polypeptide multiformity), polynucleotide and recombined material and production method thereof.Another aspect of the present invention relates to the using method of these IGS4 polypeptide, polynucleotide and recombined material.These purposes include but not limited to be used for the treatment of the PNS disorder as the treatment target, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome is twitched, tremble, dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia, or the like.Preferable use of the present invention relates to neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder, and/or tuberculosis, amynologic disease and urogenital system disorder.
Another aspect of the present invention relates to the method for using material provided by the invention to identify agonist and antagonist, and uses through compounds identified and treat the situation uneven relevant with IGS4.Another aspect of the present invention relates to the diagnostic test that is used to detect with IGS4 activity or horizontal abnormality diseases associated.Another aspect of the present invention relates to by IGS4 to be expressed or the active unusual disorderly animal model system that causes.Preferred agonist or the antagonist identified with reference to the present invention are applicable to treatment neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder, and/or tuberculosis, amynologic disease and urogenital system disorder.
The invention still further relates to the evaluation of the similar part of IGS4 polypeptide of the present invention.The neuropeptide that discovery is called Neuromedin U has high-affinity in conjunction with described IGS4 polypeptide.
The IGS4A-DNA of table 1:SEQ ID NO:1 and SEQ ID NO:3
5′- GGCTCAGCTTGAAACAGAGCCTCGTACCAGGGGAGGCTCAGGCCTTGGATTTTAATGTCA GGGATGGAAAAACTTCAGAATGCTTCCTGGATCTACCAGCAGAAACTAGAAGATCCATTC CAGAAACACCTGAACAGCACCGAGGAGTATCTGGCCTTCCTCTGCGGACCTCGGCGCAGC CACTTCTTCCTCCCCGTGTCTGTGGTGTATGTGCCAATTTTTGTGGTGGGGGTCATTGGC AATGTCCTGGTGTGCCTGGTGATTCTGCAGCACCAGGCTATGAAGACGCCCACCAACTAC TACCTCTTCAGCCTGGCGGTCTCTGACCTCCTGGTCCTGCTCCTTGGAATGCCCCTGGAG GTCTATGAGATGTGGCGCAACTACCCTTTCTTGTTCGGGCCCGTGGGCTGCTACTTCAAG ACGGCCCTCTTTGAGACCGTGTGCTTCGCCTCCATCCTCAGCATCACCACCGTCAGCGTG GAGCGCTACGTGGCCATCCTACACCCGTTCCGCGCCAAACTGCAGAGCACCCGGCGCCGG GCCCTCAGGATCCTCGGCATCGTCTGGGGCTTCTCCGTGCTCTTCTCCCTGCCCAACACC AGCATCCATGGCATCAAGTTCCACTACTTCCCCAATGGGTCCCTGGTCCCAGGTTCGGCC ACCTGTACGGTCATCAAGCCCATGTGGATCTACAATTTCATCATCCAGGTCACCTCCTTC CTATTCTACCTCCTCCCCATGACTGTCATCAGTGTCCTCTACTACCTCATGGCACTCAGA CTAAAGAAAGACAAATCTCTTGAGGCAGATGAAGGGAATGCAAATATTCAAAGACCCTGC AGAAAATCAGTCAACAAGATGCTGTTTGTCTTGGTCTTAGTGTTTGCTATCTGTTGGGCC CCGTTCCACATTGACCGACTCTTCTTCAGCTTTGTGGAGGAGTGGAGTGAATCCCTGGCT GCTGTGTTCAACCTCGTCCATGTGGTGTCAGGTGTCTTCTTCTACCTGAGCTCAGCTGTC AACCCCATTATCTATAACCTACTGTCTCGCCGCTTCCAGGCAGCATTCCAGAATGTGATC TCTTCTTTCCACAAACAGTGGCACTCCCAGCATGACCCACAGTTGCCACCTGCCCAGCGG AACATCTTCCTGACAGAATGCCACTTTGTGGAGCTGACCGAAGATATAGGTCCCCAATTC CCATGTCAGTCATCCATGCACAACTCTCACCTCCCAACAGCCCTCTCTAGTGAACAGATG TCAAGAACAAACTATCAAAGCTTCCACTTTAACAAAACCTGAATTCTTTCAGAGCTGACT CTCCTCTATGCCTCAAAACTTCAGAGAGGAACATCCCATAATGTATGCCTTCTCATATGA TATTAGAGAGGTAGAATGGCTCTTACAACTCATGTACCCATTGCTAGTTTTTTTTTTTTA ATAAACGTGAAAACTGAGAGTTAGATCTGGTTTCAAAACCCAAGACTGCCTGATTTTTAG TTATCTTTCCACTATCCTAACTGCCTCATGCCCCTTCACTAGTTCATGCCAAGAACGTGA CTGGAAAGGCATGGCACCTATACCTTGATTAATTTCCATTAATGGAAATGGTTCGTCCTG AGTCATCTACGTTCCGAGTCAGGCTGTCACTCCTACTA-3′
The IGS4B-DNA of table 2:SEQ ID NO:5 and SEQ ID NO:7
5′- GGCTCAGCTTGAAACAGAGCCTCGTACCAGGGGAGGCTCAGGCCTTGGATTTTAATGTCA GGGATGGAAAAACTTCAGAATGCTTCCTGGATCTACCAGCAGAAACTAGAAGATCCATTC CAGAAACACCTGAACAGCACCGAGGAGTATCTGGCCTTCCTCTGCGGACCTCGGCGCAGC CACTTCTTCCTCCCCGTGTCTGTGGTGTATGTGCCAATTTTTGTGGTGGGGGTCATTGGC AATGTCCTGGTGTGCCTGGTGATTCTGCAGCACCAGGCTATGAAGACGCCCACCAACTAC TACCTCTTCAGCCTGGCGGTCTCTGACCTCCTGGTCCTGCTCCTTGGAATGCCCCTGGAG GTCTATGAGATGTGGCGCAACTACCCTTTCTTGTTCGGGCCCGTGGGCTGCTACTTCAAG ACGGCCCTCTTTGAGACCGTGTGCTTCGCCTCCATCCTCAGCATCACCACCGTCAGCGTG GAGCGCTACGTGGCCATCCTACACCCGTTCCGCGCCAAACTGCAGAGCACCCGGCGCCGG GCCCTCAGGATCCTCGGCATCGTCTGGGGCTTCTCCGTGCTCTTCTCCCTGCCCAACACC AGCATCCATGGCATCAAGTTCCACTACTTCCCCAATGGGTCCCTGGTCCCAGGTTCGGCC ACCTGTACGGTCATCAAGCCCATGTGGATCTACAATTTCATCATCCAGGTCACCTCCTTC CTATTCTACCTCCTCCCCATGACTGTCATCAGTGTCCTCTACTACCTCATGGCACTCAGA CTAAAGAAAGACAAATCTCTTGAGGCAGATGAAGGGAATGCAAATATTCAAAGACCCTGC AGAAAATCAGTCAACAAGATGCTGTTTGTCTTGGTCTTAGTGTTTGCTATCTGTTGGGCC CCGTTCCACATTGACCGACTCTTCTTCAGCTTTGTGGAGGAGTGGACTGAATCCCTGGCT GCTGTGTTCAACCTCGTCCATGTGGTGTCAGGTGTCTTATTCTACCTGAGCTCAGCTGTC AACCCCATTATCTATAACCTACTGTCTCGCCGCTTCCAGGCAGCATTCCAGAATGTGATC TCTTCTTTCCACAAACAGTGGCACTCCCAGCATGACCCACAGTTGCCACCTGCCCAGCGG AACATCTTCCTGACAGAATGCCACTTTGTGGAGCTGACCGAAGATATAGGTCCCCAATTC CTATGTCAGTCATCCGTGCACAACTCTCACCTCCCAACAGCCCTCTCTAGTGAACAGATG TCAAGAACAAACTATCAAAGCTTCCACTTTAACAAAACCTGAATTCTTTCAGAGCTGACT CTCCTCTATGCCTCAAAACTTCAGAGAGGAACATCCCATAATGTATGCCTTCTCATATGA AATTAGAGAGGTAGAATGGCTCTTACAACTCATGTACCCATTGCTAGTTTTTTTTTTTTA ATAAACGTGAAAACTGAGAGTTAGATCTGGTTTCAAAACCCAAGACTGCCTGATTTTTAG TTATCTTTCCACTATCCTAACTGCCTCATGCCCCTTCACTAGTTCATGCCAAGAACGTGA CTGGAAAGGCATGGCACCTATACCTTGATTAATTTCCATTAATGGAAATGGTTCGTCCTG AGTCATCTACGTTCCGAGTCAGGCTGTCACTCCTACTA-3′
The IGS4A-64-DNA of table 3:SEQ ID NO:9 and SEQ ID NO:11
5′- GGCTCAGCTTGAAACAGAGCCTCGTACCAGGGGAGGCTCAGGCCTTGGATTTTAATGTCA GGGATGGAAAAACTTCAGAATGCTTCCTGGATCTACCAGCAGAAACTAGAAGATCCATTC CAGAAACACCTGAACAGCACCGAGGAGTATCTGGCCTTCCTCTGCGGACCTCGGCGCAGC CACTTCTTCCTCCCCGTGTCTGTGGTGTATGTGCCAATTTTTGTGGTGGGGGTCATTGGC AATGTCCTGGTGTGCCTGGTGATTCTGCAGCACCAGGCTATGAAGACGCCCACCAACTAC TACCTCTTCAGCCTGGCGGTCTCTGACCTCCTGGTCCTGCTCCTTGGAATGCCCCTGGAG GTCTATGAGATGTGGCGCAACTACCCTTTCTTGTTCGGGCCCGTGGGCTGCTACTTCAAG ACGGCCCTCTTTGAGACCGTGTGCTTCGCCTCCATCCTCAGCATCACCACCGTCAGCGTG GAGCGCTACGTGGCCATCCTACACCCGTTCCGCGCCAAACTGCAGAGCACCCGGCGCCGG GCCCTCAGGATCCTCGGCATCGTCTGGGGCTTCTCCGTGCTCTTCTCCCTGCCCAACACC AGCATCCATGGCATCAAGTTCCACTACTTCCCCAATGGGTCCCTGGTCCCAGGTTCGGCC ACCTGTACGGTCATCAAGCCCATGTGGATCTACAATTTCATCATCCAGGTCACCTCCTTC CTATTCTACCTCCTCCCCATGACTGTCATCAGTGTCCTCTACTACCTCATGGCACTCAGA CTAAAGAAAGACAAATCTCTTGAGGCAGATGAAGGGAATGCAAATATTCAAAGACCCTGC AGAAAATCAGTCAACAAGATGCTGTCTTTGTGGAGGAGTGGAGTGAATCCCTGGCTGCTG TGTTCAACCTCGTCCATGTGGTGTCAGGTGTCTTCTTCTACCTGAGCTCAGCTGTCAACC CCATTATCTATAACCTACTGTCTCGCCGCTTCCAGGCAGCATTCCAGAATGTGATCTCTT CTTTCCACAAACAGTGGCACTCCCAGCATGACCCACAGTTGCCACCTGCCCAGCGGAACA TCTTCCTGACAGAATGCCACTTTGTGGAGCTGACCGAAGATATAGGTCCCCAATTCCCAT GTCAGTCATCCATGCACAACTCTCACCTCCCAACAGCCCTCTCTAGTGAACAGATGTCAA GAACAAACTATCAAAGCTTCCACTTTAACAAAACCTGAATTCTTTCAGAGCTGACTCTCC TCTATGCCTCAAAACTTCAGAGAGGAACATCCCATAATGTATGCCTTCTCATATGATATT AGAGAGGTAGAATGGCTCTTACAACTCATGTACCCATTGCTAGTTTTTTTTTTTTAATAA ACGTGAAAACTGAGAGTTAGATCTGGTTTCAAAACCCAAGACTGCCTGATTTTTAGTTAT CTTTCCACTATCCTAACTGCCTCATGCCCCTTCACTAGTTCATGCCAAGAACGTGACTGG AAAGGCATGGCACCTATACCTTGATTAATTTCCATTAATGGAAATGGTTCGTCCTGAGTC ATCTACGTTCCGAGTCAGGCTGTCACTCCTACTA-3′
The IGS4A-protein of table 4:SEQ ID NO:2 and SEQ ID NO:4
(not containing 3 amino acid in the bracket)
(MSG)MEKLQNASWIYQQKLEDPFQKHLNSTEEYLAFLCGPRRSHFFLPVSVVYVPIFVVGV IGNVLVCLVILQHQAMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGPVGCY FKTALFETVCFASILSITTVSVERYVAILHPFRAKLQSTRRRALRILGIVWGFSVLFSLP NTSIHGIKFHYFPNGSLVPGSATCTVIKPMWIYNFIIQVTSFLFYLLPMTVISVLYYLMA LRLKKDKSLEADEGNANIQRPCRKSVNKMLFVLVLVFAICWAPFHIDRLFFSFVEEWSES LAAVFNLVHVVSGVFFYLSSAVNPIIYNLLSRRFQAAFQNVISSFHKQWHSQHDPQLPPA QRNIFLTECHFVELTEDIGPQFPCQSSMHNSHLPTALSSEQMSRTNYQSFHFNKT
The IGS4B-protein of table 5:SEQ ID NO:6 and SEQ ID NO:8
(not containing 3 amino acid in the bracket)
(MSG)MEKLQNASWIYQQKLEDPFQKHLNSTEEYLAFLCGPRRSHFFLPVSVVYVPIFVVGV IGNVLVCLVILQHQAMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGPVGCY FKTALFETVCFASILSITTVSVERYVAILHPFRAKLQSTRRRALRILGIVWGFSVLFSLP NTSIHGIKFHYFPNGSLVPGSATCTVIKPMWIYNFIIQVTSFLFYLLPMTVISVLYYLMA LRLKKDKSLEADEGNANIQRPCRKSVNKMLFVLVLVFAICWAPFHIDRLFFSFVEEWTES LAAVFNLVHVVSGVLFYLSSAVNPIIYNLLSRRFQAAFQNVISSFHKQWHSQHDPQLPPA QRNIFLTECHFVELTEDIGPQFLCQSSVHNSHLPTALSSEQMSRTNYQSFHFNKT
The IGS4A-64-protein of table 6:SEQ ID NO:10 and SEQ ID NO:12
(not containing 3 amino acid in the bracket)
(MSG)MEKLQNASWIYQQKLEDPFQKHLNSTEEYLAFLCGPRRSHFFLPVSVVYVPIFVVGV IGNVLVCLVILQHQAMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGPVGCY FKTALFETVCFASILSITTVSVERYVAILHPFRAKLQSTRRRALRILGIVWGFSVLFSLP NTSIHGIKFHYFPNGSLVPGSATCTVIKPMWIYNFIIQVTSFLFYLLPMTVISVLYYLMA LRLKKDKSLEADEGNANIQRPCRKSVNKMLSLWRSGVNPWLLCSTSSMWCQVSSST
Detailed Description Of The Invention
Definition
Provide following definition so that understand frequent some term that uses herein.
" IGS4 " refers to comprise the polypeptide of the aminoacid sequence of listing among SEQ ID NO:2 or SEQ ID NO:4 (IGS4A), SEQ IDNO:6 or the SEQ ID NO:8 (IGS4B) or its variant or the like.Preferred especially IGS4B polypeptide.
" receptor active " or " biologic activity of acceptor " refers to metabolism or the physiologic function of described IGS4, comprises these activity that similar active or improved activity or non-expectation side effect reduce.The antigenicity and the immunogenicity that also comprise described IGS4.
" IGS4 gene " refers to comprise polynucleotide or its variant and/or its complement of the nucleotide sequence of listing among SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or the SEQ ID NO:7.
When being used for this paper, " antibody " comprises polyclone and monoclonal antibody; Chimeric, strand and humanized antibody; And the Fab fragment, comprise the product in Fab or other immunoglobulin expression library.
" isolating " refers to that " artificial " separates by the native state change and/or with natural surroundings.Therefore, if composition or material that occurring in nature exists become " isolating ", then it taken place to change or environment initial with it separately, perhaps the two is furthermore.For example, naturally occurring polynucleotide or polypeptide are not " isolating " in the surviving animals, are " isolating " with identical polynucleotide or the polypeptide that the coexisting substances of native state separates still, as this term that is used for this paper.
" polynucleotide " refer generally to any polyribonucleotide or polydeoxyribonucleotide, can be the RNA or the DNA of unmodified, or modified RNA or DNA." polynucleotide " include but not limited to strand and double-stranded DNA, strand and double stranded region blended DNA, strand and double-stranded RNA, strand and double stranded region blended RNA, (wherein DNA and RNA can be strands to comprise the hybrid molecule of DNA and RNA, or more generally be double-stranded, or the mixing of strand and double stranded region).In addition, " polynucleotide " also can comprise and comprise RNA or DNA or three sequences of the two.Term " polynucleotide " also comprises DNA or the RNA that comprises one or more modified bases, and for stable or other is former thereby modified the DNA or the RNA of main chain." modified " base comprises for example tritylation base and non-common base (such as inosine).DNA and RNA have been carried out multiple modification; Therefore, " polynucleotide " contain chemistry, enzymatic or the metabolism modified forms of the polynucleotide that occurring in nature usually finds, and the DNA and the RNA chemical species of virus and cells characteristic." polynucleotide " also contain relatively short polynucleotide, are commonly referred to oligonucleotide.
" polypeptide " refers to comprise 2 or a plurality of amino acid whose any peptide or the protein that is connected with each other by peptide bond or modified peptide bond (being peptide isosteres)." polypeptide " comprises short chain, usually is called peptide, oligopeptides or oligomer; Also comprise long-chain, be commonly referred to as protein; And/or its associating.Polypeptide can comprise the amino acid beyond 20 kinds of gene coding amino acids." polypeptide " comprises and carried out the aminoacid sequence modified by natural process (such as the translation post-treatment) or by chemical modification technology well-known in the art.These modifications are described in detail in basic reader, more detailed monograph and the huge research document.Modification can betide any position in the polypeptide, comprises peptide main chain, amino acid side chain and amino or C-terminal.The modification that should be appreciated that same type can identical or different degree be present in several sites of specifying in the polypeptide.Equally, specify polypeptide can comprise the modification of many types.As the result of ubiquitination, polypeptide can be a ramose, also can be to have or do not have the ramose ring-type.Cyclic, ramose and branch's annular polypeptide can perhaps be produced by synthetic method from translation back natural process.Modification comprises acetylize; acidylate; the ADP-ribosylation; amidation; the covalency absorption of flavine; the covalency absorption of heme moiety; the covalency absorption of Nucleotide or nucleotide derivative; the covalency absorption of lipid or lipid derivant; the covalency absorption of phosphatidylinositols; crosslinked; cyclisation; the formation of disulfide linkage; demethylation; the formation of covalent cross-linking; the formation of Gelucystine; the formation of Pyrrolidonecarboxylic acid; formylation; gamma-carboxylation; glycosylation; the formation of GPI anchor; hydroxylation; iodate; methylate; the Semen Myristicae acidifying; oxidation; proteolysis processing; phosphorylation; isoprenylation; racemize; selenizing; sulfuration; add amino acid (such as arginylization) by what tRNA mediated to protein; and ubiquitination.Consult for example " protein-structure and molecular characterization " (PROTEINS-STRUCTURE AND MOLECULAR PROPERTIES), the 2nd edition, T.E.Creighton, W.H.Freeman and Company, New York, 1993; F.Wold, " post translational protein modification: viewpoint and prospect " (Posttranslational ProteinModifications:Perspectives and Prospects), " proteinic translation back covalent modification " (POSTTRANSLATIONAL COVALENT MODEFICATION OFPROTEINS) 1-12 page or leaf, B.C.Johnson compiles, Academic press, New York, 1983; People such as Seifter, the analysis of protein modification and nonprotein cofactor " (Analysisfor protein modifications and nonprotein cofactors), Enzymology method (Meth.Enzymol.) 182:626-646,1990; With people such as Rattan, " protein synthesis: posttranslational modification and aging " (Protein Synthesis:Posttranslational Modifications and Aging), NYAS's yearbook (Ann.NY Acad.Sci.) 663:48-62,1992.
When being used for this paper, " variant " refers to different with reference polynucleotide or polypeptide respectively but kept the polynucleotide or the polypeptide of intrinsic propesties (such as biology, structure, regulation and control or the biochemical characteristic of essence).Typical polynucleotide variant has different nucleotide sequences with another kind of with reference to polynucleotide.Variation in the variant nucleotide sequence might change or not change the amino acid sequence of polypeptide with reference to polynucleotide encoding.As will be explained hereinafter, Nucleotide changes can cause amino acid replacement, interpolation, deletion, fusion and brachymemma in the polypeptide of reference polynucleotide encoding.Typical polypeptide variants has different aminoacid sequences with another kind of reference polypeptide.Generally speaking, difference is limited, so reference polypeptide is similar closely on the whole to the sequence of variant, and is identical in many zones.The aminoacid sequence of variant and reference polypeptide may because of a place or many places substitute, interpolation and deletion and arbitrary combination thereof are different.The amino-acid residue that substitutes or insert can yes or no by the genetic codon coding.Polynucleotide or variant polypeptides can be naturally occurring, and such as allele variant, perhaps non-natural exists.Can be by induced-mutation technique or directly synthesize the non-natural that produces polynucleotide and polypeptide and have variant.
" identity " is the tolerance of nucleotide sequence or consensus amino acid sequence.Generally speaking, collating sequence is to obtain the highest level coupling." identity " has the implication of this area approval in essence, can use the technology of delivering to calculate.Consult, for example " calculating molecular biology " (COMPUTATIONAL MOLECULAR BIOLOGY), A.M.Lesk compiles, Oxford University Press, New York, 1988; " biological computation: information science and genome plan " (BIOCOMPUTING:INFORMATICS AND GENOME PROJECTS), D.W.Smith compiles, Academic press, New York, 1993; " Computer Analysis of sequence information " (COMPUTER ANALYSIS OFSEQUENCE DATA), part 1, A.M.Griffin and H.G.Griffin compile, Humana press, New Jersey, 1994; " sequential analysis in the molecular biology " (SEQUENCEANALYSIS IN MOLECULAR BIOLOGY), G.von Heinje, Academic press, 1987; " sequence analysis primer " (SEQUENCE ANALYSIS PRIMER), M.Gribskov and J.Devereux compile, M Stockton press, New York, 1991.There are many methods to can be used for measuring identity between two kinds of polynucleotide or the peptide sequence, term " identity " is well-known (H.Carillo and D.Lipton for those of skill in the art, SIAM applied mathematics magazine (SIAM J.Applied Math.) 48:1073,1988).Be usually used in measuring two kinds between the sequence identity or the method for similarity include but not limited to disclosed method in " giant-powered computer guide ", J.Bishop compiles, Academic press, San Diego, 1994; With H.Carillo and D.Lipton, SIAM applied mathematics magazine (SIAM J.AppliedMath.) 48:1073,1988.The method that is used to measure identity and similarity has been compiled into computer program.Be used to measure two kinds between the sequence identity and the preferred computer program technic of similarity include but not limited to GCG program software bag (people such as J.Devereux, nucleic acids research (Nucleic Acids Research) 12 (1): 387,1984), BLASTP, BLASTN, FASTA (people such as S.F.Atschul, molecular biology magazine (J.Molec.Biol.) 215:403,1990).Word " homology " alternative " identity ".
As illustration, for example, having the polynucleotide that have a nucleotide sequence of at least 95% " identity " with reference nucleotide sequence SEQ ID NO:1 means, the nucleotide sequence and the reference sequences of polynucleotide are roughly the same, and just polynucleotide sequence can comprise nearly 5 nucleotide differences in per 100 Nucleotide of reference nucleotide sequence SEQ ID NO:1.In other words, in order to obtain to have the polynucleotide with the same nucleotide sequence of reference nucleotide sequence at least 95%, can in reference sequences, delete or with other nucleotide substitution Nucleotide of 5% nearly, perhaps can insert nearly any number Nucleotide of reference sequences Nucleotide sum 5% in reference sequences, perhaps nearly any number Nucleotide of reference sequences Nucleotide sum 5% can be deletion, insert or the alternate combination.These sudden changes of reference sequences can betide 5 ' or 3 ' terminal position of reference nucleotide sequence or any position between these terminal positions, they or intersperse among in the reference sequences with single Nucleotide, or intersperse among in the reference sequences with one or more continuous group.
Similar, for example, having the polypeptide that has an aminoacid sequence of at least 95% " identity " with reference amino acid sequence SEQ ID NO:2 means, amino acid sequence of polypeptide and reference sequences are roughly the same, and just peptide sequence can comprise nearly 5 amino acid changes in per 100 amino acid of reference amino acid sequence SEQ ID NO:2.In other words, in order to obtain to have the polypeptide with the same aminoacid sequence of reference amino acid sequence at least 95%, can in reference sequences, delete or, perhaps can in reference sequences, insert any amino acid that reaches reference sequences amino acid sum 5% with other amino acid replacement amino acid of 5% nearly.These changes of reference sequences can betide the amino of reference amino acid sequence or any position between C-terminal position or these terminal positions, they or intersperse among in the reference sequences with single residue, or intersperse among in the reference sequences with one or more continuous group.
Polypeptide of the present invention
In one aspect, the present invention relates to IGS4 polypeptide (or IGS4 protein).The IGS4 polypeptide comprises the polypeptide of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 and SEQ ID NO:8, and has the polypeptide of numbering the aminoacid sequence of the contained DNA insertion of CBS102222 fragment coding by the preservation thing numbering CBS102221 or the preservation thing of the fungi strain preservation center that was preserved in Dutch Baarn on September 24th, 1999 (Centraalbureau voor Schimmelcultures); Comprise the polypeptide of the aminoacid sequence of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8, and comprise the polypeptide that preservation thing numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 by the fungi strain preservation center of Dutch Baarn insert the aminoacid sequence of fragment coding; Be included on its total length aminoacid sequence with SEQ ID NO:2, SEQ IDNO:4, SEQ ID NO:6 or SEQ ID NO:8, and/or has the polypeptide of the aminoacid sequence of at least 80% identity with the aminoacid sequence that inserts fragment coding by the fungi strain preservation center preservation thing of Dutch Baarn numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222, still more preferably with described aminoacid sequence at least 90% identity, even more preferably at least 95% identity still.In addition, highly preferably have at least 97%, particularly at least 99% identity.The IGS4 polypeptide also is included on its total length and has SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, or the polypeptide of the aminoacid sequence of SEQ ID NO:8 or with have the polypeptide that inserts the aminoacid sequence of fragment coding by the fungi strain preservation center preservation thing of Dutch Baarn numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 and have the polypeptide of the aminoacid sequence of at least 80% identity, still more preferably with SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, or SEQ ID NO:8 has at least 90% identity, even more preferably at least 95% identity still.In addition, highly preferably have at least 97%, particularly at least 99%.Preferred IGS4 polypeptide is showed at least a biologic activity of acceptor.
In another embodiment of the invention, the IGS4 polypeptide can be the part than larger protein (such as fusion rotein).It usually is favourable comprising extra aminoacid sequence, these additional amino acid sequences comprise secretion sequence or leader sequence, former sequence, such as a plurality of histidine residues etc. help purifying sequence, help the sequence (such as hemagglutinin HA label) that detects or in the recombinant production process, help stable additional sequences such as antigenic peptide label etc.
The present invention also comprises the fragment of IGS4 polypeptide.Fragment refers to have with the part of above-mentioned IGS4 polypeptid acid sequence but not whole polypeptide of identical aminoacid sequence.The same with the IGS4 polypeptide, fragment can be " independently ", or is contained in the big polypeptide and forms a part or zone, most preferably as single successive zone.The representative examples of polypeptide fragment of the present invention comprises that for example the IGS4 polypeptide amino acid is numbered about 1-20 position, 21-40 position, 41-60 position, 61-80 position, 81-100 position and the 101st-terminal fragment.In this article, " approximately " comprises at one end or compares at two ends big or little several, 5,4,3,2 or 1 amino acid of scope of concrete narration.
Preferred fragment comprises for example having the IGS4 amino acid sequence of polypeptide but having deleted and comprises aminoterminal a series of continuous residue or comprise a series of continuous residue of C-terminal or deleted two sections continuous residues truncation type polypeptide of (a section comprises N-terminal, and another section comprises C-terminal).Example with reference to truncation type polypeptide of the present invention is respectively by polynucleotide SEQ ID NO:9 and the SEQ ID NO:10 of SEQ ID NO:11 coding and the polypeptide of SEQ ID NO:12.The same fragment that is preferably characterized by structure or functional attributes forms the fragment that district, beta sheet and beta sheet formation district, corner and corner form the district, curl and curl into district, hydrophilic area, hydrophobic region, α amphiphilic district, β amphiphilic district, flex region, surface formation district, substrate land and high antigenic index region such as comprising alpha-helix and alpha-helix.Other preferred fragment is a biological active fragment.Biological active fragment is the fragment of those mediation receptor actives, comprises that those have similar activity or improve activity, the active fragment that reduces of perhaps non-expectation.Comprise that also those have antigenicity or immunogenic fragment in animal (especially people).
Therefore, polypeptide of the present invention comprise have with the aminoacid sequence of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8 and/or with the polypeptide that has by the same aminoacid sequence of the polypeptide at least 80% of the preservation thing numbering CBS102221 at the fungi strain preservation center of Dutch Baarn or the aminoacid sequence that the contained DNA of preservation thing numbering CBS102222 inserts fragment coding, perhaps have its fragment of at least 80% identity with respective segments.Preferably, all these polypeptide fragments have kept the biologic activity of acceptor, comprise antigenicity.Determine that sequence and segmental variant also constitute a part of the present invention.Preferred variants is that those substitute (promptly substituting with the residue with similar features) variant different with object of reference because of conserved amino acid.It is between Ala, Val, Leu and the Ile that typical this class substitutes; Between Ser and the Thr; Between acidic residues Asp and the Glu; Between Asn and the Gln; And between alkaline residue Lys and the Arg; Or substituting between aromatic residue Phe and the Tyr.Particularly preferably be wherein substitute, deletion or interpolation and arbitrary combination is several, 5-10,1-5 or 1-2 amino acid whose variant.
About polypeptide of the present invention, find that also they show in conjunction with Neuromedin U high-affinity being arranged, particularly Neuromedin U 8 (8 amino acid whose oligopeptides), Neuromedin U 23 (23 amino acid whose oligopeptides) and/or Neuromedin U 25 (25 amino acid whose oligopeptides).In content of the present invention, term " high-affinity " is interpreted as to describe and shows log EC 50Value is lower than-6.00 (approximately 660nM), preferred log EC at least 50Value is lower than-7.00 (approximately 55nM), more preferably logEC 50Value is lower than-9.00 (approximately 500pM-1.2nM), most preferably log EC 50Value is lower than the part combination of-10.00 (approximately 50-100pM).
In the literature, two kinds of forms with the neuropeptide Neuromedin U, be Neuromedin U 8 and Neuromedin U 25, be described as at first and separate by Medulla Sus domestica, can stimulate the hypertensive peptide of uterus and tool (people such as Minamino, biological chemistry and biophysical studies communication (Biochem.Biophys.Res.Commun.) 130:1078-1085,1985).For Neuromedin U 23 (23 amino acid whose oligopeptides), consult for example people such as Okimura, chemistry of peptides (Pept.Chem.) 32:321-324,1995, vol.date 1994; People such as Salmon, journal of biological chemistry (J.Biol.Chem.) 275 (7): 4549-4554,2000.Separated Neuromedin U (NMU) by many species subsequently, as rat (NMU23), people (NMU25), frog (NMU25), dog (NMU8 and NMU25), rabbit (NMU25) and chicken (NMU25).Thus, people such as Domin have described and have used special radioimmunoassay experiment that the Neuromedin U immunoreactivity in rat, pig, cavy and the people's tissue extract is identified (biological chemistry and biophysical studies communication (Biochem.Biophys.Res.Commun.) 140:1127-1134,1986).People such as Conlon (neurochemistry (Neurochem.) 51:988-991,1988) have set up the primary structure from the Neuromedin U 23 of rat ileum.People such as Minamino (biological chemistry and biophysical studies communication (Biochem.Biophys.Res.Commun.) 156:355-360,1988) the main immunoaffinity chromatography that is used for pig Neuromedin U 8 is tested with radioimmunoassay and has been separated the rat Neuromedin U by small intestine, measured the aminoacid sequence of rat Neuromedin U by micro-sequential analysis, and confirmed structure by synthetic.Though the C-terminal seven peptide amide structures of pig Neuromedin U are conservative fully in the rat Neuromedin U, this peptide rest part is compared with pig Neuromedin U 25 and is shown 9 amino acid whose replacements and 2 amino acid whose deletions.People such as Domin (journal of biological chemistry (J.Biol.Chem.) 264:20881-20885,1989) also measured distribution, primary structure and the relative biologic activity of Neuromedin U among the frog Rana temporaria, found that whole sequence is 25 peptides that demonstration and pig and rat Neuromedin U have remarkable sequence similarity.In further research, people such as Domin (regulating peptide (Regul.Pept.) 41:1-8,1992) by the chicken purifying birds homologue of Neuromedin U.It is 25 amino-acid residues that the trace sequential analysis is accredited as length with peptide, and the chicken Neuromedin U shows with the pig peptide that at the C of its biologically active end regions remarkable sequence similarity is arranged.People (peptide (Peptides) 12:11-15,1991) such as O ' Harte have described separation, the structure of dog Neuromedin U 25 and have identified and pharmacological activity.In addition, for rabbit Neuromedin U 25, find that its lacks the conservative property turn over damp post-treatment site people such as (, regulate peptide (Regul.Pept.) 33:191-198,1991) Kage; Therefore, in the rabbit Neuromedin U, the two alkaline residue processing of the Arg16-Arg17 that finds in pig and dog Neuromedin U 25 site is replaced by Arg-Gly, but this potential list alkalescence processing site is not by the nickase utilization in the intestines.
In the species of being studied, it is almost completely conservative that discovery is positioned at 5 amino acid of peptide C-terminal, illustrates that this district has main importance.Therefore, mammalian nervous Jie peptide is shared biologic activity and is seemed essential C terminal sequence " Phe-Leu-Phe-Arg-Pro-Arg-Asn-acid amides ".NMU be distributed in gi tract and central nervous system (CNS) the two.In rat, find that in ileum neuromedin (NMU) concentration is the highest, be hypophysis, hypothalamus, spinal cord, Tiroidina and urogenital tract then.Immunohistochemistry studies show that, only in nerve fiber (mainly being myenteron and meissnar's plexus) and found the NMU immunoreactivity in the intestines in the mucous membrane of the All Ranges except stomach, and do not find the NMU immunoreactivity in endocrine cell.In rat brain, in the fiber that is distributed widely in the full brain except cerebellum, find to have the NMU immunoreactivity.The people and the rat gene that have separated coding NMU precursor.The two is at C end coding NMU, middle part encode other potential peptide prod (people such as Lo, molecular endocrinology magazine (J.Mol.Endocrinol.) 6:1538-1544,1992; People such as Austin, molecular endocrinology magazine (J.Mol.Endocrinol.) 14:157-169,1995).In rat uterus, identified high-affinity NMU combination, and shown that the acceptor that NMU is described should be a g protein coupled receptor to GTP--S sensitivity people such as (, incretology (Endocrinology) 133:482-486,1993) Nandha.Yet it is unknown that the physiological role of NMU remains to a great extent.Neuromedin U can cause unstriated muscle strong contraction, rising arteriotony, change the intestines ion transport and stimulate adrenocortical function and growth at low dosage.NMU also shows can reduce the blood flow in the artery and portal vein on the intestines, slightly strengthens the blood flow in the pancreas tissue simultaneously.
In addition, according to International Patent Application WO 90/01330, Neuromedin U 8 and U25 are applicable to the treatment gastrointestinal disturbance, as are used in gastrointestinal hemorrhage and the hypotensive after the meal treatment selectivity and reduce and flow to GI blood flow.
Identified IGS4 polypeptide of the present invention be reply Neuromedin U or to the g protein coupled receptor of its enough similar part.Therefore, reply the IGS4 acceptor of Neuromedin U, particularly IGS4B acceptor, with greatly help to Neuromedin U with to the understanding of the physiological mechanisms of its enough similar part, and to the understanding of relative disease.
Table 5-8 has shown the tissue distribution and the expression level of polypeptide of the present invention, and those of skill in the art can estimate location and the dependency expressed thus.For example, about the tissue distribution of polypeptide of the present invention, by analyze as MTE (multiple tissue expression), Northern engram analysis and quantitative RT-PCR expression analysis found IGS4 polypeptide of the present invention specifically as brain, skeletal muscle, cerebellum, thymus gland, medullary substance, Tiroidina, tracheae, thalamus, black substance, corpus callosum, caudatum, pons, volt nuclear (nucleusaccumbens), tire brain and stomach in the medium level expression (respectively with respect in the MTE trace as 100% testis in or in quantitative RT-PCR as the expression in 100% the spinal cord); And as in the heart, lung and prostate gland, express (if can detect) by quantitative RT-PCR with related levels.For example, if expression level thinks then that at least 20% of the expression values (being made as 100%) of high expression level in the testis found so far or the spinal cord they are medium.For example, if can detect expression level by the quantitative RT-PCR analysis at least, think that then expression level is correlated with.Will be appreciated that the expression level of pointing out for any organ is the mean value that constitutes expression level in the particular organization of organ and the cell type.Therefore, if find that the expression level about organ is relevant, this does not get rid of, and (as the particular organization and/or the cell type of organ) has partial medium even highly expression in the specific region.
These presentation of results IGS4 polypeptide preferably acts on neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or Tiroidina, and/or tuberculosis, amynologic disease and urogenital system disorder.
Therefore, in another embodiment, the present invention relates to comprise the separation IGS4 polypeptide of the aminoacid sequence of neuromedin receptor protein, preferred mammal neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25.Particularly, the separation IGS4 polypeptide that comprises the aminoacid sequence of neuromedin receptor protein is the protein that is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland and/or the tracheae and expresses (at least can by Northern and/or MTE and/or quantitative RT-PCR analyzing and testing to).In the variant of this embodiment, the present invention relates to comprise the neuromedin receptor protein, the IGS4 polypeptide of the aminoacid sequence of preferred mammal neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23, and/or Neuromedin U-25, described protein is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, the tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland, and/or express (can pass through Northern and/or MTE and/or quantitative RT-PCR analyzing and testing at least arrives) in the tracheae, and described aminoacid sequence is selected from aminoacid sequence defined above.
Can prepare IGS4 polypeptide of the present invention by any suitable method.These polypeptide comprise polypeptide, synthetic polypeptide that produces that isolating naturally occurring polypeptide, reorganization produce or the polypeptide of being united generation by these methods.The method that is used to prepare these polypeptide is well known in the art.
Polynucleotide of the present invention
Another aspect of the present invention relates to the IGS4 polynucleotide.The IGS4 polynucleotide comprise coding IGS4 polypeptide (comprising IGS4A and IGS4B) and segmentally separate polynucleotide, and polynucleotide closely-related with it.In particular, IGS4 polynucleotide of the present invention comprise the SEQ ID NO:1 of the IGS4B polypeptide of the IGS4A polypeptide that comprises encode respectively SEQ ID NO:2 or SEQ ID NO:4 or SEQ ID NO:6 or SEQ ID NO:8, SEQ ID NO:3, SEQ IDNO:5, or the polynucleotide of contained nucleotide sequence among the SEQ ID NO:7, has SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5, or the polynucleotide of the particular sequence of SEQ ID NO:7 and the preservation thing numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 that are equivalent to the fungi strain preservation center of Dutch Baarn basically insert segmental polynucleotide.
The IGS4 polynucleotide also comprise and are included on its total length the NO:2 with coding SEQ ID, SEQ IDNO:4, SEQ ID NO:6, or the nucleotide sequence of the IGS4 polypeptide of SEQ ID NO:8 has the polynucleotide of the nucleotide sequence of at least 80% identity, be included on its total length and SEQID NO:1, SEQ ID NO:3, SEQ ID NO:5, or the polynucleotide of the same nucleotide sequence of the nucleotide sequence at least 80% of SEQ ID NO:7 and the preservation thing numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 that are equivalent to the fungi strain preservation center of Dutch Baarn basically insert segmental polynucleotide.
In this respect, especially preferably have the polynucleotide of at least 90% identity, especially preferably have the polynucleotide of at least 95% identity.In addition, highly preferably have the polynucleotide of at least 97% identity, topnotch preferably has the polynucleotide of 98-99% identity at least, the polynucleotide that especially have at least 99% identity.The IGS4 polynucleotide also comprise with SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or SEQ ID NO:7 in contained nucleotide sequence or insert fragment with the preservation thing numbering CBS102221 at the fungi strain preservation center of Dutch Baarn or the contained DNA of preservation thing numbering CBS102222 and have enough identity, thereby can be used for increasing or as the condition of probe or mark under the nucleotide sequence of hybridization takes place.The present invention also provides and these IGS4 polynucleotide complementary polynucleotide.
Shown in the BLSAT Search Results in public data storehouse, IGS4 of the present invention is structurally relevant with other protein of g protein coupled receptor family.The aminoacid sequence of table 1 (SEQ ID NO:2) is (316 amino-acid residues) and people orphan's g protein coupled receptor (numbering 043664 on its most of length, people such as Tan, genomics (Genomics) 52 (2): 223-229,1998) have about 46% identity and (use BLAST, people such as S.F.Altschul, nucleic acids research (Nucleic Acids Res.) 25:3389-3402,1997).There is 27% homology (61-349 amino acids residue) with rat neurotensin 1 acceptor (numbering P20789, people such as K.Tanaka, neurone (Neuron) 4:847-854,1990).The nucleotide sequence of table 1 (SEQ ID NO:1) 63% same with orphan's g protein coupled receptor on the nucleotide residue of 120-864 position (numbering AF044600 is corresponding to protein sequence 043664).In addition, on the residue of 94-1137 position, there is 53% identity (people such as A.D.Howard, science (Science): 273:974-977,1996) with human growth hormone secretogogue acceptor.Therefore, estimate that IGS4 polypeptide of the present invention has similar biological function/characteristic with polynucleotide to its homeopeptide and polynucleotide, and their effectiveness it will be apparent to those skilled in the art that.
Can obtain polynucleotide of the present invention by natural origin such as genomic dna.Particularly, can design the degenerate pcr primer of conserved regions in the specific gpcr gene subtribe of coding.The pcr amplification reaction that uses degenerated primer that genomic dna or cDNA are carried out will cause that the amplification of the several members of gene family (known and new) in the consideration is (when the use genomic templates, degenerated primer must be positioned at identical exon) (people such as Libert, science (Science) 244:569-572,1989).Can use well-known commercial technology (as people such as F.M.Ausubel, " molecular biology current programme " (Current Protocols in Molecular Biology), 2000) to synthesize polynucleotide of the present invention.
Coding SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, or the nucleotide sequence of the IGS4 polypeptide of SEQ ID NO:8 may be identical with contained polypeptid coding sequence among SEQ ID NO:1 (55-1299 position Nucleotide) or SEQ ID NO:3 (64-1299 position Nucleotide) or SEQ ID NO:5 (55-1299 position Nucleotide) or the SEQ ID NO:7 (64-1299 position Nucleotide) respectively, perhaps it may be different nucleotide sequence, but because of genetic code redundancy (degeneracy), respectively with SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5, or contained polypeptid coding sequence is compared display change among the SEQ ID NO:7, but also encodes SEQID NO:2, SEQ ID NO:4, SEQ ID NO:6, or the polypeptide of SEQ ID NO:8.
In another embodiment, the present invention relates to encode IGS4 neuromedin receptor protein optimized encoding mammalian nervous Jie peptide receptor protein, the separating nucleotide sequence, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25.Particularly, the separating nucleotide sequence encoding is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland and/or the tracheae IGS4 neuromedin receptor protein of expressing (can pass through Northern and/or MTE and/or quantitative RT-PCR analyzing and testing at least arrives).In the variant of this embodiment, IGS4 neuromedin receptor protein optimized encoding mammalian nervous Jie peptide receptor protein the present invention relates to encode, the separating nucleotide sequence, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23, and/or Neuromedin U-25, described protein is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, the tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland, and/or express (can pass through Northern and/or MTE and/or quantitative RT-PCR analyzing and testing at least arrives) in the tracheae, and described nucleotide sequence is selected from nucleotide sequence defined above.
When polynucleotide of the present invention were used for the recombinant production of IGS4 polypeptide, polynucleotide self can comprise mature polypeptide or its segmental encoding sequence; Mature polypeptide or its segmental encoding sequence and other encoding sequence (such as coding leader sequence or secretion sequence, proteinogen sequence, preceding protein sequence, preproprotein sequence or other fusogenic peptide part) are in the reading frame.For example, codified helps the flag sequence of purifying fusion polypeptide.In some preferred embodiment of this respect of the present invention, flag sequence is six Histidine peptides, as providing in the pQE carrier (Qiagen company), and be described in people such as Gentz, progress (Proc.Natl.Acad.Sci.USA) 86:821-824 of NAS, 1989), or the HA label.Polynucleotide also can comprise 5 ' and 3 ' non-coding sequence, such as transcribing but the sequence of the sequence of not translating, montage and polyadenylation signal, ribosome bind site and stable mRNA.
Another embodiment preferred is that coding comprises the IGS4 polypeptid acid sequence of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8 but wherein several, 5-10,1-5,1-3,1-2 or 1 amino-acid residue are replaced, deletion or add or its polynucleotide of IGS4 variant of associating arbitrarily.
The method that can use this area generally to know is transformed polynucleotide of the present invention, thereby for multiple purpose, includes but not limited to clone, processing and/or the expression of modifying factor product, and change the IGS4 encoding sequence.The DNA reorganization that PCR by random fragmentation and gene fragment and synthetic oligonucleotide reassemblies and carries out can be used for transforming nucleotide sequence.For example, can be used for importing sudden change by oligonucleotide mediated site-directed mutagenesis, thereby produce amino acid replacement, produce new restriction site, change (as glycosylation or the phosphorylation) pattern of modification, change codon-bias, produce splice variant, or the like.
The invention still further relates to the polynucleotide that hybridization takes place with the above-mentioned sequence of this paper.In this respect, the invention particularly relates to the polynucleotide that hybridization takes place with above-mentioned polynucleotide under rigorous condition.When being used for this paper, when referring to have only between sequence and to have at least 80% (preferably at least 90%, more preferably at least 95%, even more preferably at least 97%, particularly at least 99%) identity, term " rigorous condition " just hybridizes.
With contained nucleotide sequence among SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or the SEQ ID NO:7 or its fragment is same or enough same polynucleotide of the present invention, can be used as the hybridization probe of cDNA and genomic dna, be used to separate encode full-length cDNA and the genomic clone of IGS4, and be used to separate cDNA and the genomic clone that has other gene (comprising that coding is from the homologue of inhuman species and the gene of orthogenesis homologue) of height sequence similarity with the IGS4 gene.Those skilled in the art understand these hybridization techniques fully.Usually, these nucleotide sequences and reference sequences 80% are same, and preferred 90% is same, and more preferably 95% is same.Probe will comprise at least 5 Nucleotide usually, preferred at least 8 Nucleotide, more preferably at least 10 Nucleotide, even more preferably at least 12 Nucleotide, particularly at least 15 Nucleotide.Most preferably, these probes will have at least 30 Nucleotide, and can have at least 50 Nucleotide.The scope of particularly preferred probe is a 30-50 Nucleotide.
For an embodiment of the polynucleotide of the IGS4 polypeptide (comprising homologue and orthogenesis homologue from inhuman species) that obtains to encode comprises the following steps: that under rigorous hybridization conditions SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or SEQ ID NO:7 or its are segmental to screen suitable library through label probe with having, and separate full-length cDNA and the genomic clone that comprises described polynucleotide sequence.These hybridization techniques are well-known to those skilled in the art.Rigorous hybridization conditions defines as mentioned, or shear in the solution of salmon sperm dna in 42 ℃ of incubated overnight containing 50% methane amide, 5 * SSC (150mM NaCl, 15mM trisodium citrate), 50mM sodium phosphate (pH7.6), 5 * DenhardtShi liquid, 10% T 500 (w/v) and 20 μ g/ml sex change, use 0.1 * SSC in about 65 ℃ of cleaning filter membranes subsequently.
Polynucleotide of the present invention and polypeptide can be used as treatment and the diagnosis that research reagent and material are used for exploit person and Animal diseases.
Carrier, host cell, expression
The invention still further relates to the carrier that comprises polynucleotide of the present invention and, also relate to by recombinant technology and produce polypeptide of the present invention with the engineered host cell of vector gene of the present invention.Use is by DNA construction derived RNA of the present invention, and cell free translation system also can be used for producing these protein.
For recombinant production, can expression system or its part of genetic engineering modified host cell to mix polynucleotide of the present invention.Can by many standard laboratory guides (such as people such as Davis, " molecular biology basic skills " (BASIC METHODS IN MOLECULAR BIOLOGY), 1986; With people such as Sambrook, " molecular cloning: lab guide " (MOLECULAR CLONING:A LABORATORY MANUAL), the 2nd edition, press of cold spring harbor laboratory, the cold spring port, New York, 1989) method of describing in, such as calcium phosphate transfection, transfection, transposition (transvection), microinjection, transfection, electroporation, transduction, scraping by the mediation of positively charged ion lipid by DEAE-dextran mediation load (scrape loading), bombardment imports or infect, and polynucleotide are imported host cell.
The representative examples of suitable host comprises bacterial cell, such as suis, staphylococcus, intestinal bacteria, streptomycete and bacillus subtilis mycetocyte; The fungal cell is such as yeast cell and aspergillus cell; Insect cell is such as fruit bat S2 and Spodoptera Sf9 cell; Zooblast is such as CHO, COS, HeLa, C127,3T3, BHK, HEK293 and Bowes melanoma cells; And vegetable cell.
Can use a variety of expression systems.These systems comprise by karyomit(e), episome and viral deutero-system, as by bacterial plasmid, bacteriophage, transposon, yeast episome, insertion element, the yeast chromosomal element, viral such as baculovirus, papovavirus (such as SV40), vaccinia virus, adenovirus, fowlpox virus, pseudorabies virus and retrovirus deutero-carrier, and by above-mentioned associating deutero-carrier, such as by plasmid and phage genetic elements deutero-carrier, such as clay and phagemid.The control region that expression system can comprise regulation and control and cause expression.Generally speaking, can use and be applicable in the host and keep, breed or express any system or the carrier that polynucleotide produce polypeptide.Can pass through multiple well-known routine techniques, described in people such as Sambrook " molecular cloning: lab guide " (seeing above), suitable nucleotide sequence be inserted expression system.
For the protein secreting that translation is produced enters endoplasmic reticulum inner chamber, periplasmic space or born of the same parents' external environment, suitable secretion signal can be mixed desired polypeptides.These signals can be endogenous, or external source, promptly derived from different plant species.
Generally speaking, if will express the IGS4 polypeptide is used for screening experiment, preferably produce polypeptide at cell surface.At this moment, can be before being used for screening experiment harvested cell.Avidity or functionally active at the IGS4 polypeptide are subjected in the situation of receptor active modified protein (RAMP) modification, and most possibly preferably at the relevant RAMP of cell surface coexpression, and this usually needs.Need before being used for screening experiment, gather in the crops the cell of expressing IGS4 polypeptide and relevant RAMP this moment equally.If the secretion of IGS4 polypeptide enters substratum, then recyclable substratum is to reclaim and purified polypeptide; If be created in the born of the same parents, then at first must lysing cell before reclaiming polypeptide.Can reclaim the film of expressing the IGS4 polypeptide by the well-known method of those skilled in the art.Generally speaking, these methods comprise that results express the cell of IGS4 polypeptide, and by such as, but not limited to the method for pottering with cell homogenates.Can be by suspension being cleaned once or reclamation film several times.
Can reclaim and purifying IGS4 polypeptide by the reconstitution cell culture by well-known method, comprise ammonium sulfate or ethanol sedimentation, acid extraction, negatively charged ion or cation-exchange chromatography, phosphorylated cotton chromatography, hydrophobic interaction chromatography, affinity chromatography, hydroxyapatite chromatography and lectin chromatography.Most preferably, adopt high performance liquid chromatography to carry out purifying.When polypeptide separating and/or purge process in when sex change takes place, can adopt to be used for the folding again technology of protein as everyone knows and to produce activated conformation again.
Diagnostic test
The invention still further relates to the purposes of IGS4 polynucleotide as diagnostic reagent.The detection of the mutant IGS4 gene relevant with dysfunction will provide diagnostic tool, thus the disease that increase or clear and definite expression deficiency by IGS4, overexpression or expression variation cause or the diagnosis of its susceptibility.Equally, may need the proteic coexpression of associated receptor activity modifying this moment, to obtain the diagnostic test of prospective quality.Can pass through multiple technologies, on dna level, detect the individuality that carries sudden change in the IGS4 gene.
Can such as by blood, urine, saliva, living tissue sample or the material that becomes celestial, obtain diagnostic nucleic acid by experimenter's cell.Genomic dna can be directly used in detection, perhaps can carry out enzymatic amplification by PCR or other amplification technique before analysis.RNA or cDNA also can use in a similar manner.Can detect deletion and insertion by the size variation that amplified production is compared with normal genotype.Can hybridize by the DNA after will increasing and through mark IGS4 nucleotide sequence and identify point mutation.Can distinguish the duplex of the sequence and the erroneous matching of Perfect Matchings by the difference of RNA enzymic digestion or melting temperature (Tm).Also can perhaps detect dna sequence dna difference (consulting as people such as Myers science (Science) 230:1242,1985) by the variation of the electrophoretic mobility of dna fragmentation in the gel that contains or do not contain denaturing agent by direct dna sequencing.Also can disclose the sequence variation (consulting people such as Cotton, progress (Proc.Natl.Acad.Sci.USA) 85:4397-4401 of NAS, 1985) of specific position by nuclease protection experiment (such as RNA enzyme and S1 protection) or chemical chop method.In another embodiment, can make up and comprise IGS4 nucleotide sequence or its segmental oligonucleotide probe array and carry out efficient screening as genetic mutation.The method of array technique is well-known, and have general applicability, and be used in and solve various problems in the molecular genetics, comprise that genetic expression, genetic linkage and hereditary mutability (consult for example people such as M.Chee, science (Science) 274:610-613,1996).
Diagnostic test provides by the sudden change of aforesaid method detection IGS4 gene and has diagnosed or definite method to following disease susceptibility: the PNS disorder, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia, with other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome, twitch, tremble dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia.Particularly, diagnostic test of the present invention provides and has been used to diagnose or definite method to following disease susceptibility: neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder, and/or tuberculosis, amynologic disease and urogenital system disorder.
In addition, can be by comprising by diagnosing the PNS disorder derived from experimenter's sample determination IGS4 polypeptide or the unusual reduction of IGS4mRNA level or the method for rising, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmalanxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome is twitched, tremble, dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia.Particularly, can be by comprising by diagnosing neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder derived from the sample determination IGS4 polypeptide of object or the unusual reduction of IGS4mRNA level or the method for rising, and/or tuberculosis, amynologic disease and urogenital system disorder.Can use any quantitative technology of polynucleotide that is used for well-known in the art to measure reduction or the rising of expressing, such as PCR, RT-PCR, RNA enzyme protection, Northern trace and other hybridizing method at rna level.The experimental technique that can be used for measuring derived from protein (such as IGS4) level in host's the sample is well-known to those skilled in the art.These experimental techniques comprise radioimmunoassay experiment, competitive binding experiment, Western engram analysis and ELISA experiment.
On the other hand, the present invention relates to be used to diagnose the illness or the diagnostic kit of its susceptibility particularly PNS disorder, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome, twitch, tremble dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia, it comprises:
(a) IGS4 polynucleotide, nucleotide sequence or its fragment of preferred SEQ ID NO:1, SEQ ID NO:3, SEQ IDNO:5 or SEQ ID NO:7; And/or
(b) with (a) complementary nucleotide sequence; And/or
(c) IGS4 polypeptide, polypeptide or its fragment of preferred SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8; And/or
(d) at the antibody of IGS4 polypeptide, preferred pin is to the antibody of the polypeptide of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8; And/or
(e) the RAMP polypeptide that the associated biomolecule of IGS4 polypeptide is learned or the antigenicity characteristic needs.
Will be appreciated that in any of these test kit (a) and (b), (c), (d) or (e) can comprise substantive composition.Preferably, the present invention relates to be used to diagnose or determine the diagnostic kit of following disease or its susceptibility: neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disease, and/or tuberculosis, amynologic disease and urogenital system disorder.
The karyomit(e) experiment
Nucleotide sequence of the present invention also can be used for karyomit(e) to be identified.With the specific position on the single human chromosome of sequence specific target, and can hybridize with it.With reference to the present invention correlated series being mapped to karyomit(e) is the important the first step that those sequences and gene-correlation disease are connected.In case sequence is positioned accurate chromosome position, the physical location of sequence on karyomit(e) is associated with the genetic map data.These data can find in " human Mendelian inheritance " (can be obtained by the Johns Hopkins Welch of university medical library by network) of for example V.McKusick.Then by the relation between linkage analysis (the common heredity of adjacent gene physically) identified gene and the disease that is positioned identical chromosomal region.
Also can measure cDNA or genome sequence difference between the influenced and impregnable individuality.If observe sudden change in some or all affected individualities, and do not observe this sudden change in any normal individual, then it might be the cause of disease of disease.
Antibody
Polypeptide of the present invention or its fragment or its analogue are perhaps expressed the cell of their (if necessary, also expressing together with relevant RAMP), also can be used as immunogen and are used to produce immunologic opsonin antibody at the IGS4 polypeptide.Term " immunologic opsonin " refers to that antibody is significantly higher than avidity to other related polypeptide in the prior art to the avidity of polypeptide of the present invention.
Use conventional scheme,, can obtain the antibody that produces at the IGS4 polypeptide by animal (preferred non-human animal) is used polypeptide or carries fragment, analogue or the cell of epi-position.For MONOCLONAL ANTIBODIES SPECIFIC FOR, can use any technology that the antibody that is produced by the continuous cell line culture is provided.Example comprises hybridoma technology (G.Kohler and C.Milstein, nature (Nature) 256:495-597,1975), trioma technology, human B cell hybridoma technology (people such as Kozbor, immunology today (Immunology Today) 4:72,1983) and EBV-hybridoma technology (people such as Cole, " monoclonal antibody and cancer therapy " (MONOCLONALANTIBODIES AND CANCER THERAPY), 77-96 page or leaf, Alan R.Liss company, 1985).
Above-mentioned antibody can be used for separating or identifying the clone of express polypeptide, or is used for by the affinitive layer purification polypeptide.
Also can be used for treating the PNS disorder at these IGS4 polypeptide or at the antibody of IGS4 polypeptide-RAMP mixture, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia, with other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome, twitch, tremble dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; With gynaecopathia or the like.Preferably, antibody of the present invention can be used for treating neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder, and/or tuberculosis, amynologic disease and urogenital system disorder.
Animal
Another aspect of the present invention relates to as the non-human animal system that is caused disorderly model by IGS4 unconventionality expression or activity.The non-human animal model system also can be used for further identifying the activity of IGS4 gene.These systems can be used as the part of screening strategy, and described strategy is designed for the compound that evaluation can be treated following disorder based on IGS4, such as the PNS disorder, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodicparoxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome, twitch, tremble dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia.Particularly, these systems are as the part of screening strategy, described strategy is designed for evaluation can treat neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder based on IGS4 and/or the compound of tuberculosis, amynologic disease and urogenital system disorder.So, animal model can be used for identifying pharmacopedics compound, therapy and the intervention method that can effectively treat by IGS4 expression or the active disorder that causes unusually.In addition, these animal models can be used for measuring the LD in the animal target 50And ED 50These data can be used for measuring the interior effect of body of the disorderly potential treatment of IGS4.
Based on IGS4 express or active unusual, can comprise non-recombinant animal and through the transgenic animal of modified recombinant based on the animal model system of the disorder of IGS4.
The animal model of IGS4 disease can comprise for example genetic model.Can utilize for example IGS4 sequence (all as indicated above), the well-known technology that is used to produce transgenic animal of associating those skilled in the art is transformed the animal model of showing based on the disorderly sample symptom of IGS4.For example, the IGS4 sequence can be imported the genome of purpose animal, and overexpression therein or false demonstration, perhaps, if there is an endogenous IGS4 sequence, but thereby then their overexpressions, false demonstration or destroyed and express deficiency or deactivation IGS4 genetic expression.
For overexpression or false demonstration IGS4 gene order, the encoding part of IGS4 gene order can be connected with the regulating and controlling sequence that can drive high-level genetic expression or can express in the purpose type of animal in the cell type that this gene is not expressed usually.These regulating and controlling sequences are well-known to those skilled in the art, and their use does not need too much experiment.
Not enough for endogenous IGS4 gene order is expressed, separable this sequence is also transformed, and makes behind the genome that imports the purpose animal again, and the allelotrope of endogenous IGS4 gene is with inactivation or " knocking out ".Preferably, by the IGS4 gene order of gene targeting importing, make that endogenous IGS4 sequence is destroyed after transformation IGS4 gene order is incorporated in the animal gene group through transforming.This part hereinafter gene targeting will be discussed.
The animal of any species includes but not limited to mouse, rat, rabbit, squirrel, cavy, pig, miniature pig, goat and non-human primates (as baboon, monkey and chimpanzee), can be used for producing the animal model of IGS4 associated disorders.
Can use any technology known in the art that the IGS4 transgenosis is imported animal, to produce the initial system (founder line) of transgenic animal.These technology include but not limited to protokaryon microinjection (P.C.Hoppe and T.E.Wagner, 1989, U.S. Patent number 4,873,191); Enter and kind be people such as (, progress (Proc.Natl.Acad.Sci.USA) 82:6148-6152 of NAS, 1985) van der Putten by the transgenosis of retrovirus-mediated method; Gene targeting in the embryonic stem cell (people such as Thompson, cell (Cell) 56:313-321,1989); Embryo's electroporation (Lo, molecular cytobiology (Mol.Cell.Biol.) 3:1803-1814,1983); With by the transgenosis of sperm mediation people such as (, cell (Cell) 57:717-723,1989) Lavitrano; Deng.Gordon is consulted in the review of these technology, " transgenic animal " (Transgenic Animals), and international cytology is looked back (Intl.Rev.Cytol.) 115:171-229,1989 (complete being collected herein by reference).
The invention provides and in its all cells, carry the genetically modified transgenic animal of IGS4, and at some but not carry genetically modified animal in all cells, be chimaeric animals (consulting for example Jakobovits, existing biology (Curr.Biol.) 4:761-763,1994 technology of describing).Transgenosis can be to integrate with single transgenosis, or concatermer, as head-head series connection or head-tail series connection.Also can be by the teaching of people such as for example Lasko people such as (, progress (Proc.Natl.Acad.Sci.USA) 89:6232-6236 of NAS, 1992) M.Lasko, the transgenosis selectivity is imported particular cell types and be activated therein.The regulating and controlling sequence that the special activation of this cell type needs will depend on concrete purpose cell type, and be conspicuous for those skilled in the art.
When in the chromosomal foci that the IGS4 transgenosis need be incorporated into endogenous IGS4 gene, preferred gene is practiced shooting.In brief, in the time will using this technology, design comprises the carrier of the nucleotide sequence (as the nucleotide sequence of mouse IGS4 gene) of some and the endogenous IGS4 dna homolog of purpose, is used for by integrating and destroy the function of endogenous IGS4 gene or its allelic nucleotide sequence with the homologous recombination of chromosome sequence.Also can the transgenosis selectivity be imported particular cell types by the teaching of people such as for example Gu people such as (, science (Science) 265:103-106,1994) H.Gu, thus deactivation purpose native gene in this cell type only.The regulating and controlling sequence that the special deactivation of this cell type needs will depend on concrete purpose cell type, and be conspicuous for those skilled in the art.
In case produced transgenic animal, can utilize measured by standard techniques reorganization IGS4 gene and protein expression.Can analyze to animal tissues whether genetically modified integration has taken place by Southern engram analysis or round pcr, so carry out preliminary screening.Also can use the technology such as Northern engram analysis, hybridization in situ technique and RT-PCR that include but not limited to the tissue sample that obtains by animal, the genetically modified mRNA expression level of IGS4 in the tissue of evaluation transgenic animal.Also can use tissue sample at specific antibody evaluation expression target gene on immunocytochemistry of purpose target gene transgene product.Can further estimate IGS4 transgenic animal then, show animal based on the characteristic symptom of IGS4 disorder to identify those at horizontal expression IGS4 gene mRAN that is easy to detect or IGS4 transgenosis peptide (using antibody on immunocytochemistry, to detect) at the target gene product epi-position.
In case produced the initial animal of IGS4 transgenosis (being that those express IGS4 protein and preferred animal of showing based on the symptom of IGS4 disorder in the purpose cell or tissue), can be with their cultivations, inbreeding, outbreeding or hybridization to produce the colony of this concrete animal.These examples of cultivating strategy include but not limited to: will contain the initial animal outbreeding that surpasses an integration site to set up different is; Not homologous inbreeding is expressed the genetically modified compound IGS4 transgenic lines of purpose IGS4 to produce the result who expresses because of each IGS4 transgenosis addition with higher level; The hybridization of heterozygosis transgenic animal is specified the homozygote animal of integration site with generation, thereby not only improved expression but also eliminated screen may needing of animal by DNA analysis; Difference is isozygotied subsystem hybridization to produce the compound heterozygote or the subsystem that isozygotys; Animal and different patroclinal inheritance backgrounds are carried out breeding to check modification allele to IGS4 transgene expression and IGS4 sample symptom Influence and Development.A kind of method like this is that initial animal of IGS4 transgenosis and wild-type incross are showed the F1 generation of above-mentioned IGS4 associated disorders sample symptom with generation.Then, if find that homozygote target gene transgenic animal are fertile, then can for inbreeding be with F1 to set up the homozygote kind.
Vaccine
Another aspect of the present invention relates to and is used for learning the method for replying at the Mammals induction of immunity, comprises administration (for example by inoculation) IGS4 polypeptide or its fragment, then uses with the RAMP polypeptide if desired, amount of application enough produces antibody and/or the T cellullar immunologic response avoids the PNS disorder to watch for animals, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome is twitched, tremble, dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; With gynaecopathia or the like.Aspect in addition of the present invention relates to and is used for learning the method for replying at the Mammals induction of immunity; comprise by the carrier that instructs the IGS4 polynucleotide to express in vivo and deliver the IGS4 polypeptide; thereby induce this immunological response to produce antibody, protect described animal to avoid disease.The present invention is specifically related to be used for learning the method for replying at the Mammals induction of immunity; comprise to Mammals inoculation IGS4 polypeptide or its fragment; also inoculate if desired with the RAMP polypeptide; inoculum size enough produces antibody and/or the T cellullar immunologic response avoids neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder to protect described animal, and/or tuberculosis, amynologic disease and urogenital system disorder.
Of the present invention also have an aspect to relate to immunology/vaccine preparation (composition), after importing mammalian hosts, will induce the immunological response at the IGS4 polypeptide in this Mammals, and wherein composition comprises IGS4 polypeptide or IGS4 gene.These immunology/vaccine preparations (composition) can be curative immunology/vaccine preparations, or preventative immunology/vaccine preparation.Vaccine preparation also can comprise suitable carriers.Because the IGS4 polypeptide may degrade under one's belt, therefore preferred parenteral is used (comprise subcutaneous, intramuscular, intravenously, intracutaneous, etc. injection).Be applicable to that the preparation that parenteral is used comprises water-based and non-aqueous aseptic parenteral solution, can comprise antioxidant, damping fluid, fungistat and make preparation and the isoosmotic solute of recipient's blood; And water-based and non-aqueous sterile suspensions, can comprise suspension agent or thickening material.Preparation can be present in the container of unitary dose or many doses, and for example Mi Feng ampoule or medicine bottle can store by lyophilised state, only need add sterile liquid carrier before facing use.Vaccine preparation also can comprise and be used to strengthen the immunogenic adjuvant system of preparation, other system of knowing such as oil-in-water system and this area.Dosage will depend on the specific activity of vaccine, and be easy to measure by normal experiment.
Screening experiment
IGS4 polypeptide of the present invention can be used for screening bind receptor and activates (agonist) or the method for the compound of inhibition activation (antagonist) receptor polypeptides of the present invention.Therefore, polypeptide of the present invention also can be used for evaluation Example such as cell, acellular preparation, chemical library and medium and small molecule substrate of natural product mixture and part in conjunction with situation.These substrates and part can be natural substrate and part, or structure or functional analogue thing.
The IGS4 polypeptide is responsible for biological function, comprises pathology.Therefore, wish to find compound and the medicine that stimulates IGS4 maybe can suppress the IGS4 function.Generally speaking, agonist can be used for the treatment and the prevention purpose of following situation, such as the PNS disorder, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome, twitch, tremble dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (moti1ity disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia.Antagonist can be used for the treatment and the prevention purpose of multiple situation, such as the PNS disorder, psychosis, with the CNS disorder, comprise schizophrenia, ictal paroxysmal anxiety (episodic paroxysmal anxiety, EPA) disease such as obsession (OCD), post-traumatic stress disorder (PTSD), phobia, and fear, heavy dysthymia disorders, bipolar disorder, parkinsonism, generalized anxiety disorder, autism, delirium, multiple sclerosis, Alzheimer's disease/dementia and other neurodegenerative disease, serious mental retardation, dyskinesia, Huntington Chorea, Tourette syndrome is twitched, tremble, dystonia, spasm, apositia, exessive appetite, apoplexy, habit-forming/dependence/serious hope, somnopathy, epilepsy, migraine; Attention deficit/hyperactivity disorder (ADHD); Cardiovascular disorder comprises heart failure, stenocardia, irregular pulse, myocardial infarction, cardiac hypertrophy, ypotension, hypertension (as essential hypertension, renal hypertension or pulmonary hypertension), thrombosis, arteriosclerosis, cerebral vasospasm, subarachnoid hemorrhage, cerebral ischemia, cerebral infarction, peripheral vascular disease, raynaud's disease, ephrosis (as renal failure); Unusual lipidemia (dyslipidemias); Obesity; Vomiting; Gastrointestinal dysfunction comprises irritable bowel syndrome (IBS), inflammatory bowel (IBD), gastroesophageal reflux disease (GERD), mobility obstacle (motility disorder) and delayed gastric emptying situation, such as operation back or diabetic gastroparesis, and diabetes, ulcer (as stomach ulcer); Diarrhoea; Other disease comprises osteoporosis; Inflammation; Infect, such as bacterium, fungi, protozoon and virus infection, the particularly infection that causes by HIV-1 or HIV-2; Pain; Cancer; Damage by the chemotherapy inductive; Tumour is invaded; Immunologic derangement; Uroschesis; Asthma; Transformation reactions; Sacroiliitis; Benign prostatauxe; Endotoxin shock; Sepsis; Diabetic complication; And gynaecopathia.Particularly, the present invention can be used for screening bind receptor and activates (agonist) or the method for the compound of inhibition activation (antagonist) IGS4 neuromedin receptor protein, preferred mammal IGS4 neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25.These screening experiments are specially adapted to screening to neural system (comprising central nervous system (CNS) and peripheral nervous system (PNS)), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder, and/or the disorderly compounds effective of tuberculosis, amynologic disease and urogenital system.
Generally speaking, these screening processes comprise and are created in its surface expression receptor polypeptides of the present invention and if desired then also at the suitable cell of its surperficial coexpression RAMP.These cells comprise from Mammals, yeast, fruit bat or colibacillary cell.The cells contacting testing compound that makes expressed receptor (or cytolemma comprises the acceptor of expression) then to be to observe in conjunction with situation, perhaps stimulation or the inhibition situation that function is replied.
A kind of triage techniques is included in and uses the cell of the expressing acceptor of the present invention Chinese hamster ovary celI of transfection (for example through) in the system that pH in the outer pH of born of the same parents that measurement causes by receptor activation, the born of the same parents or cellular calcium change.In this technology, can make the compound contact express the cell of receptor polypeptides of the present invention.Measure the second messenger then and reply (changing or calcium level changes), whether activate or suppress acceptor to determine potential compound as signal transduction, pH.
Another kind method comprises by measuring by the adjusting of receptor-mediated signal (such as cAMP accumulation and/or adenylate cyclase activity) screens acceptor inhibitor.This method comprises uses acceptor transfecting eukaryotic cells of the present invention, thereby at the cell surface expression this receptor.In having the situation of potential antagonist, make the agonist of cellular exposure then in acceptor of the present invention.If the potential antagonist bind receptor, and suppress receptors bind thus, then will be regulated by the signal of agonist mediation.
Be used to detect the agonist of acceptor of the present invention or the another kind of method of antagonist is a U.S. Patent number 5,482, describe in 835 (being collected herein by reference) based on the zymic technology.
These experiments can only test candidate compound in conjunction with situation, the marker by directly or indirectly linking to each other with candidate compound wherein perhaps relating in the experiment of the competition of mark competitor, detects the adhesion to the cell that carries acceptor.In addition, these experiments can be used and be applicable to that the surface carries the detection system of the cell of acceptor and test candidate compound and whether cause the signal that produced by receptor activation.Usually in having the situation of known agonist, identify the activated inhibitor, and the observation agonist influences to activated in having the situation of candidate compound.
Thus, can filter out demonstration and IGS4 acceptor generation part bonded candidate compound of the present invention.In content of the present invention, " part combination " is interpreted as and describes the avidity demonstration log EC of compound to the IGS4 acceptor 50Value is lower than-6.00 (approximately 660nM), preferred log EC at least 50Value is lower than-7.00 (approximately 55nM), more preferably log EC 50Value is lower than-9.00 (approximately 500pM-1.2nM), most preferably log EC 50Value is lower than-10.00 (approximately 50-100pM).
Therefore, in one aspect of the invention, relate to being used for determining whether certain material is the method for the potential part of IGS4 acceptor, comprising:
(a) exist and do not exist in the situation of described material, make the cell of one of the acceptor of expressing one of IGS4 neuromedin acceptor defined above or SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 and SEQ ID NO:8, perhaps make the receptor membrane preparation of one of acceptor of comprising one of IGS4 neuromedin acceptor defined above or SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 and SEQ ID NO:8 contact Neuromedin U through mark; And
(b) measure combining of Neuromedin U and IGS4.
In addition, the solution that these experiments can only comprise the following steps: to mix candidate compound and contain the IGS4 polypeptide is measured the IGS4 activity in the mixture to form mixture, and the IGS4 activity of mixture is compared with standard.
IGS4 cDNA, protein and also can be used for setting up at this proteinic antibody and be used for detecting the experiment of adding compound pair cell IGS4 mRNA and proteinogenous influence.For example, can set up ELISA,, use mono-clonal and polyclonal antibody measurement proteic secretion level of IGS4 or cell in conjunction with level by the standard method that this area is known.This can be used for finding the cell or tissue of proper handling is suppressed or strengthens the reagent (also being called antagonist or agonist) of IGS4 generation.The standard method that is used to carry out screening experiment is well known in the art.
The example of potential IGS4 antagonist comprises closely-related oligonucleotide of part or the protein of antibody or (in some situation) and IGS4, as the fragment of part, thereby or bind receptor but not initiating response can prevent the small molecules of receptor active.
Therefore, in yet another aspect, the present invention relates to be used to identify the IGS4 polypeptide agonist, antagonist, part, acceptor, substrate, enzyme, etc.; Perhaps reduce, raise and/or strengthen the screening reagent box of the compound that the IGS4 polypeptide generates, it comprises:
(a) IGS4 polypeptide, the polypeptide of preferred SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8;
(b) express the IGS4 polypeptide, the reconstitution cell of the polypeptide of preferred SEQ ID NO:2, SEQ ID NO:4, SEQ IDNO:6 or SEQ ID NO:8;
(c) cytolemma of expression IGS4 polypeptide, the cytolemma of the IGS4 polypeptide of preferred expression SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8; Perhaps
(d) at the antibody of IGS4 polypeptide, preferred pin is to the antibody of the IGS4 polypeptide of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8.
Will be appreciated that in any of these test kit (a) and (b), (c) or (d) can comprise substantive composition.
Prevention and methods of treatment
The invention provides and be used for the treatment of the method that relates to the excessive or insufficient unusual condition of IGS4 live vol.
If IGS4's is excessively active, then can use several method.A kind of method is can accept carrier with pharmacopedics, with effective inhibition activated amount, object is used inhibitor compound mentioned above (antagonist), by combining of block ligand and IGS4, perhaps, alleviate unusual condition thus by the interaction of inhibition with RAMP polypeptide or second signal.
Another kind method be use can with the soluble form of the IGS4 polypeptide of the competitive binding partner of endogenous IGS4.The typical embodiments of this competitor comprises the fragment of IGS4 polypeptide.
Also has a kind of method to be to use to express interrupter technique suppress the to encode expression of gene of endogenous IGS4.Known this technology comprises the use of antisense sequences, or inner the generation or separate administration.Consult O ' Connor for example, neurochemistry magazine (J Neurochem) 56:560,1991; " oligodeoxynucleotide is as the antisense inhibitor of genetic expression " (Oligodeoxynucleotides as Antisense Inhibitors of GeneExpression), CRC press, Boca Raton, Florida, the U.S., 1988.Perhaps, can use the oligonucleotide that forms triplex with gene.Consult people such as Lee for example, nucleic acids research (Nucleic Acids Res) 6:3073,1979; People such as Cooney, science (Science) 241:456,1988; People such as Dervan, science (Science) 251:1360,1991).These oligomers itself can be used, perhaps relevant oligomer can be expressed in vivo.Synthetic antisense or triplex oligonucleotide can comprise modified base or modified main chain.The latter's example comprises methylphosphonate, thiophosphatephosphorothioate or peptide nucleic acid(PNA) main chain.Provide protection for the Degradation of avoiding nuclease, these main chains are mixed antisense or triplex oligonucleotide, this is well known in the art.Also constitute a part of the present invention with these or other modified main chain synthetic antisense and triplex molecule.
In addition, can use the sequence-specific ribozyme of IGS1 mRNA is prevented the IGS4 polypeptide expression.Ribozyme is to have the natural of catalytic activity or synthetic RNA (consulting for example people such as N.Usman, the existing viewpoint of structure biology (Curr.Opin.Struct.Biol.) 6 (4): 527-533,1996).Synthetic ribozyme can be designed to the mRNA at the special cutting of select location IGS1, thereby prevention IGS1 mRNA translates into functional polypeptide.Available natural ribose phosphoric acid main chain and natural base synthetic kernel enzyme are as common in the RNA molecule.Perhaps, for the Degradation at rnase provides protection, available non-natural main chain (for example 2 '-O-methyl RNA) synthesizes ribozyme, and can comprise modified base.
IGS4 expresses and the treatment of active insufficient unusual condition for relating to, and also can use several method.A kind of method is can accept carrier with pharmacopedics, and the compound (being agonist mentioned above) to the activation IGS4 of object administering therapeutic significant quantity alleviates unusual condition thus.Perhaps, can adopt gene therapy to realize the endogenous generation of relevant cell IGS4 in the subject.For example, as mentioned above, can transform polynucleotide of the present invention, thereby in replication defect type reverse transcription carrier, express.Separable then retrovirus expression construction, and import the packing cell of transduceing with the reverse transcription plasmid vector of the RNA that comprises code book invention polypeptide, make packing cell produce the infectivity virion that comprises goal gene.Can use these producer's cells to object, thus engineered cells and express polypeptide in vivo in vivo.The general introduction of gene therapy, consult " human molecular genetics " (Human Molecular Genetics), the 20th chapter " gene therapy and other methods of treatment " (and reference of quoting) based on molecular genetics, T.Strachan and A.P.Read, BIOS Scientific Publishers company limited, 1996.
Can use any above-mentioned methods of treatment to any object of this therapy of needs, comprise for example Mammals, such as dog, cat, ox, horse, rabbit, monkey, most preferably be the people.
The prescription and use
Peptide (such as the soluble form of IGS4 polypeptide) and can carry out co-formulated with suitable pharmacopedics carrier as the peptide or the small molecules of agonist and antagonist.These prescriptions comprise the polypeptide or the compound for the treatment of significant quantity, and pharmacopedics acceptable carrier or vehicle.Prescription should be fit to mode of administration, and belongs to fully within the art technology scope.The invention still further relates to pharmacopedics packing and test kit, wherein comprise one or more containers that one or more above-mentioned composition compositions of the present invention are housed.
Polypeptide of the present invention and other compound can use separately, perhaps unite with other compound (such as therapeutic compound).
The preferred form of the systemic administration of pharmacopedics composition comprises injection, normally intravenous injection.Also can use other injection path, such as subcutaneous, intramuscular or intraperitoneal.The alternative approach of systemic administration comprises uses wearing mucous membrane and wearing dermal administration of permeate agent (such as cholate or fusidinic acid or other stain remover).In addition, if correctly be mixed with intestines prescription or capsule formula, then Orally administered also is possible.
The dosage range that needs depends on peptide or compound, the path of using, the essence of prescription, the essence of object situation and doctor in charge's the judgement of selection.Suitable dosage ranges is a 0.1-100 μ g/kg object body weight.Yet, consider that the diversity of available compound is different with the efficient in different administration path, estimate altering a great deal of required dosage.For example, estimate that the dosage of Orally administered requirement is bigger than intravenous injection.Understand fully as this area, can use the empirical conventional procedure of standard to adjust the variation of these dosage levels to be optimized.
The polypeptide that uses in treatment also can endogenous generation in subject, the form of therapy of mentioned above usually being called that Here it is " gene therapy ".Therefore, for example can use polynucleotide (such as DNA or RNA), for example, transform cell, thereby exsomatize coded polypeptide from object by using retroviral plasmid vector.Then, cell is imported in the subject.
Embodiment
The following example just for further more detailed illustration the present invention, therefore not will be understood that these embodiment limit the scope of the invention by any way.
Embodiment 1: the clone of the cDNA of the new g protein coupled receptor of encoding
Embodiment 1a: the homology PCR clone of the genomic fragment of the g protein coupled receptor (GPCR) of encoding new
Use the tactful portion gene group dna sequence dna that separates the new g protein coupled receptor of coding of homology clone of PCR-based.According to neurotensin receptor gene family (people such as N.Vita, FEBS communication (FEBS Lett.) 317:139-142,1993; People such as N.Vita, Europe pharmacology magazine (Eur.J.Pharmacol.) 360:265-272,1998) conserved regions, be the inside of membrane spaning domain 1 (TM1) and 3 (TM3) and the border between TM3 and the interior ring of born of the same parents 2 (I2), designed forward (F22) and reverse (R44 and R46) degenerate pcr primer:
F22(TM1):
5′-CTCATCTTCGCGGTGGGC(A or G)C(A,C,G or T)G(C or T)(A,C,G or T)GG-3’(SEQ ID NO:13)
R44(TM3/I2):
5 '-GGCCAGGCAGCGCTCCGCGCT (C or inosine) A (A or G) (A, C, G or T) C (C or T) (A, C, G or T) GC (A, Gor T)-3 ' (SEQ ID NO:14)
R46(TM3):
5′-GAA(A or G)TA(A or G)TAGCC(A or G)CG(A or G)CAGCC(A or T)-3′ (SEQ ID NO:15)
In order to contain the known member's of neurotensin receptor family amplification, 3 ' the terminal nucleotide position of the primer R44 of selection and the correspondence position of NTR1 and the two cDNA of NTR2 are not complementary.PCR is reflected in the 60 μ l volumes and carries out, and comprises 100ng human gene group DNA (Clontech), 6 μ lGeneAmp TM10 * PCR damping fluid II (100mM Tris-HCl pH8.3,500mM KCl, Perkin Elmer), 3.6 μ l 25mM MgCl 2, 0.36 μ l dNTP mixture (containing every kind of dNTP 25mM), 1.5U AmpliTaq-Gold TMPolysaccharase (Perkin Elmer) and every kind of degeneracy forward of 30pmol (F22) and reverse (R44) primer.With reaction tubes in 95 ℃ of heating 10min, carry out then 35 round-robin sex change (95 ℃, 1min), annealing (55 ℃, 2min) and extend (72 ℃, 3min).At last reaction tubes is heated 10min in 72 ℃.
For half nested PCR reaction, the elementary PCR reaction solution that uses 1 μ l, 1/50 dilution uses F22 and R46 as degeneracy forward and reverse primer respectively as template.With elementary PCR reacting phase with condition under carry out half nested PCR reaction.
Half nested PCR reaction product is carried out size separation on sepharose, and dye with ethidium bromide.Though be contemplated to ± fragment of 220bp, only see ± fragment of 120bp.Use Qiaex-II TMPurification kit (Qiagen) is by this fragment of gel-purified, and use pGEM-T test kit (Promega) is connected in the pGEM-T plasmid with reference to the flow process that supplier recommends.Consequent recombinant plasmid is used for transformed competence colibacillus intestinal bacteria SURE TM2 bacteriums (Stratagene).To be coated on the LB agar plate that contains 100 μ g/ml penbritins, 0.5mM IPTG and 50 μ g/ml X-gal through transformant.Use Qiagen-tip 20 micropreparation test kits (Qiagen), by the micro-culture plasmid DNA purification of indivedual bacterium colonies.Use ABI Prism TMBigDye TMStop thing cycle sequencing easy reaction test kit (PE-ABI), use and insert fragment flank primer, purified plasmid DNA is carried out dna sequencing reaction.
Table 7: the general introduction of used oligomer primer
SEQ ID NO:13 F22:5′-CTCATCTTCGCGGTGGGC(A or G)C(A,C,G or T)G(C or T)(A,C,G or T)GG-3′
SEQ ID NO:14 R44:5 '-GGCCAGGCAGCGCTCCGCGCT (C or inosine) A (A or G) (A, C, G or T) C (C or T) (A, C, G or T) GC (A, G or T)-3 '
SEQ ID NO:15 R46:5′-GAA(A or G)TA(A or G)TAGCC(A or G)CG(A or G)CAGCC(A or T)-3′
SEQ ID NO:16 AP1:5′-CCATCCTAATACGACTCACTATAGGGC-3′
SEQ ID NO:17 AP2:5′-ACTCACTATAGGGCTCGAGCGGC-3′
SEQ ID NO:18 IGS4R1:5′GGATCCCAAATAAGAAAGGGTAGTTGC-3′
SEQ ID NO:19 IGS4R2:5′AAAGGGTAGTTGCGCCACATCTCATAGAC-3′
SEQ ID NO:20 IGS4F5:5′AGGTCTATGAGATGTGGCGCAACTACCCT-3′
SEQ ID NO:21 IGS4F6:5′ATGTGGCGCAACTACCCTTTCTTATTTGGG-3′
SEQ ID NO:22 R74:5′-CGGAAGTTGGCGGACACG(A or G)(A,C or G)(A or G)TT(A or G)TA-3′
SEQ ID NO:23 IGS4F7:5′-GCTCAGCTTGAAACAGAGCCTCGTACC-3′
SEQ ID NO:24 IGS4F8:5′-CCATGTGGATCTACAATTTCATCATCC-3′
SEQ ID NO:25 IGS4F9:5′-AAGACAAATCTCTTGAGGCAGATGAAGGG-3′
SEQ ID NO:26 IGS4F10:5′-GATGCTGTTTGTCTTGGTCTTAGTGTTTGC-3′
SEQ ID NO:27 IGS4R5:5′-GGATGATGAAATTGTAGATCCACATGGGC-3′
SEQ ID NO:28 IGS4R6:5′-TGTGGAGAAGTCTCTCAAAGTGTGG-3′
SEQ ID NO:29 IGS4R7:5′-TAGTAGGAGTGACAGCCTGACTCGGAACG-3′
SEQ ID NO:30 IGS4R8:5′-AACGTAGATGACTCAGGACGAACCATTTCC-3′
SEQ ID NO:31 IGS4F11:5′-TCGTACCAGGGGAGGCTCAGGC-3′
Precipitate purifying sequencing reaction product by EtOH/NaOAc, and on ABI 377 automatization sequenators, analyze.
The insertion fragments sequence analysis of clone HNT1552 shows, its might encode part of the newcomer of GPCR family.We are called IGS4 with this new GPCR sequence.
Embodiment 1b: the segmental clone of cDNA who comprises complete IGS4 encoding sequence
Analyze and RT-PCR increases that the two has obtained the complete encoding sequence of IGS4 cDNA by RACE (rapid amplifying of cDNA end).Use and Marathon TMAdapter primer 1 and 2 (the AP1:SEQ ID NO:16 that cDNA amplification kit (Clontech, catalog number K1802-1) provides together; AP2:SEQ ID NO:17) with the IGS4 special primer, at Marathon-Ready from brain or testis TMCarry out 5 ' and 3 ' RACE PCR reaction on the cDNA (Clontech, catalog number are respectively 7400-1 and 7414-1).With reference to the Marathon-Ready that provides by Clontech TMPCR RACE reaction is carried out in the indication of cDNA user manual.The RACE product is separated on sepharose, use ethidium bromide staining, and transfer to Hybond N +On the film.With trace in modified Church damping fluid (0.5M phosphoric acid salt, 7%SDS, 10mM EDTA) in 65 ℃ of prehybridizations 2 hours, containing 2 * 10 then 6Cpm/ml 32Spend the night in 65 ℃ of hybridization in the same buffer of the IGS4 cDNA probe of P mark.Use Prime-It II test kit TM(Stratagene), with reference to the indication that supplier provides, mix by causing at random [α- 32P] dCTP is tagged to IGS4 cDNA probe radiation than work>10 9Cpm/ μ g.At the rigorous degree of height (2 * SSC/0.1%SDS, room temperature, 2 * 30min; 0.1 * SSC/0.1%SDS subsequently, 65 ℃, 2 * 40min) clean through the hybridization trace, and radioautograph is spent the night.By preparation property gel-purified hybridized fragment, be cloned in the pGEM-T carrier, and order-checking as mentioned above.
Use IGS4 specific primer I GS4R1 (SEQ ID NO:18) partly nested 5 ' RACE of the first round of human brain cDNA to be analyzed and produced clone HNT1886 and HNT1887 (Fig. 1) with IGS4R2 (SEQ ID NO:19) (dna sequence dna according to clone HNT1552 designs).These clones extend to the upstream of IGS4cDNA sequence, and cross the translation initiation codon of inferring.Equally, use IGS4 specific primer I GS4F5 (SEQ ID NO:20) and IGS4F6 (SEQ ID NO:21) that the first round 3 ' the RACE analysis of human brain cDNA has been produced clone HNT1874-1878 and HNT1902-1903 (Fig. 1).These clones have extended the 3 ' end of known IGS4cDNA.
The all sequences that this moment obtains is assembled into the single contig that comprises long opening code-reading frame, its coding and people's orphan receptor FM-3 (people such as Tan, genomics (Genomics) 52:223-229,1998; GenBank numbers AF044600 and AF044601) part of the most similar new protein.In order to analyze the rna expression profile of IGS4, under the condition that supplier recommends, will comprise Master Blot from the RNA of different people tissue TMFilm (Clontech, catalog number 7770-1) with 32The clone HNT1903 of P mark inserts fragment and hybridizes.Obtain the strongest hybridization by testis RNA, and want much weak by the signal that prostate gland, stomach, spinal cord, hippocampus, oblongata, Tiroidina, thymus gland, lung and tracheae obtain.
Because the sequence of contig does not still comprise complete IGS4 encoding sequence, therefore we have carried out the cloning experimentation of RT-PCR homology on the full cerebral RNA of people, use IGS4 specific primer I GS4F6 (SEQ ID NO:21) and degenerated primer R74 (SEQ ID NO:22), back one primer is according to comprising neurotensin receptor 1 and 2, secretagogue receptor (people such as A.D.Howard, science (Science) 273:974-977,1996), and orphan GPCR FM-3 and GPR38 (people such as K.K.McKee, genomics (Genomics) 46:426-434,1997) design in the conserved regions (part in the TM7/C end born of the same parents) of interior GPCR subtribe.RT-PCR is reflected in the 50 μ l volumes and carries out on total RNA of 500ng from human brain, uses Titan with reference to supplier's recommendation TMSingle tube RT-PCR system (Boehringer, catalog number 1,888,382).The RT-PCR condition is as follows: in 55 ℃ of reverse transcription 45min; In 94 ℃ of sex change 2min, 20 round-robin cooling PCR reaction subsequently is (in 94 ℃ of sex change 30sec, in 30sec[-0.25 ℃ of 60 ℃ of annealing/circulation], with extend 2min in 68 ℃), take turns 30 PCR circulations (in 94 ℃ of sex change 30sec with another, extend the 3min[+5sec/ circulation in 55 ℃ of annealing 30sec with in 68 ℃]).At last with the extra extension step of 68 ℃ of 7min as end.Use the insertion fragment of radiolabeled clone HNT1903, by Southen engram analysis reaction product.Use QiaexII TMTest kit (Qiagen), by gel-purified and probe take place hybridization ± the 690bp fragment, and be cloned in the pGEM-T carrier, produce clone HNT2210-2212.These clones' sequential analysis can be extended existing IGS4 cDNA contig on 3 ' direction.
Because the IGS4 cDNA contig after extending does not still contain translation stop codon, therefore designed special 3 ' the RACE primer of other IGS4 (IGS4F7-10, SEQ ID NO:23-26).At Marathon Ready from people's testis TMCarry out nested on the cDNA (Clontech, catalog number 7414-1) or half nested 3 ' RACE reaction.IGS4 specific band (using the IGS4 specific probe to estimate by the Southern trace) is cloned among the pGEM-T, produces and clone HNT2289-2290 (AP1/IGS4F5->AP2/IGS4F9), HNT2293-2295 (AP1/IGS4F6->AP2/IGS4F9), HNT2296-2297 (AP1/IGS4F7->AP2/IGS4F9), HNT2308-2310 (AP1/IGS4F8->AP2/IGS4F10) and HNT2253 (AP1/IGS4F7->AP1/IGS4F5).At testis Marathon Ready TMExtra 5 ' the RACE PCR reaction generation clone HNT2279-2281 that carries out on the cDNA (AP2/IGS4R6->AP2/IGS4R5).(note: referring to clone as AP1/IGS4F5->AP2/IGS4F9 is by using primer to the elementary RACE PCR reaction of Ap1/IGS4F5 and with primer the IGS4 specific fragment that the nested back of AP2/IGS4F9 obtains to be produced).
Existing IGS4cDNA contig can be further extended in these clones' sequential analysis on 3 ' direction, but does not reach the end of IGS4 encoding sequence yet.IGS4 contig dna sequence dna is to the area of computer aided homology search (Blastn of expressed sequence tag (EST) database (dbest); People such as S.F.Altschul, nucleic acids research (Nucleic Acids Res.) 25:3389-3402,1997) show, there is the est sequence (numbering N45474) (identity of crossover region is near 100%) that overlaps with IGS4 contig 3 ' end.EST N45474 further extends IGS4 DNA contig to translation stop codon and 3 ' non-translational region (3 '-UTR) on 3 ' direction.In addition, identify another group EST (Fig. 2) that all covers IGS4mRNA 3 '-UTR.Designed other IGS4 special primer (IGS4R7-8, SEQ ID NO:29-30) according to 3 ' of these EST-UTR.Use the multiple combination of primer I GS4F7 (SEQ ID NO:23), IGS4F11 (SEQ ID NO:31) and IGS4R7-8 (SEQ ID NO:29-30), at Marathon Ready from people's testis TMCarry out elementary PCR reaction on the cDNA.With the PCR pipe in 95 ℃ of heating 2min, carry out then 35 round-robin sex change (95 ℃, 30sec), annealing (65 ℃, 30sec) and extend (72 ℃, 90sec).At last reaction tubes is heated 10min in 72 ℃.Carry out nested PCR reaction equally under the same conditions.By the dna fragmentation of gel-purified ± 1630bp, and be cloned in the pGEM-T carrier, obtain following clone: HNT2311, HNT2312 and HNT2317 (IGS4F7/IGS4R7->IGS4F11/IGS4R8); HNT2313, HNT2324, HNT2326 and HNT2328 (IGS4F11->IGS4R8); HNT2314, HNT2315 and HNT2322 (IGS4F11->R7).1630bp PCR fragment by purifying obtains clone HNT2363, and this fragment is by people's testis Marathon Ready TMCDNA uses the IGS4F11/R7 primer to increasing under following condition of slightly changing: at first behind 94 ℃ of sex change 2min, the PCR pipe is carried out (94 ℃ of 15 round-robin sex change, 15sec), annealing is (65 ℃, 30sec) and extend (72 ℃, 2min), other subsequently 20 round-robin sex change (94 ℃, 15sec), annealing (65 ℃, 30sec) and extend (72 ℃, 2min; + 10sec/ circulation), be the extension step of 72 ℃ of 7min at last.These clones' sequential analysis can be assembled IGS4 cDNA consensus sequence (Fig. 1).Scrutiny to all clones shows that they in fact belong to 2 kinds of sequence types, and it is different that 5 nucleotide positions are arranged.These variant sequences are corresponding to the polymorphism among the crowd.Our the cDNA type that these are different is called IGS4ADNA (SEQ ID NO:1 and SEQID NO:3) and IGS4BDNA (SEQ ID NO:5 and SEQ ID NO:7).Consensus sequence comprises long opening code-reading frame, wherein comprise 2 initiator codons (the 55-57 position among IGS4ADNA and the IGS4BDNA (SEQ ID NO:1 and SEQ ID NO:5) and 64-66 position (SEQ ID NO:3 and SEQ ID NO:7)) that are in same reading frame, prediction shows 415 (SEQ ID NO:2 and SEQ ID NO:6) or the individual amino acid whose protein of 412 (SEQ ID NO:4 and SEQ ID NO:8) that has better homology with PGCR protein.Proteinic hydrophilicity analysis (people such as J.Kyte, molecular biology magazine (J.Mol.Biol.) 157:105-132,1982; People such as P.Klein, biological chemistry and biophysics journal (Biochim.Biophys.Acta) 815:468-476,1985) also indication have 7 membrane spaning domains.Because first ATG initiator codon is in the weak Kozak translation initiation sequence, and second be in the strong Kozak sequence, so IGS4A/B protein might be initial by second methionine(Met), and length is 412 amino acid (M.Kozak, gene (Gene) 234:187-208,1999).But it is initial by first ATG to get rid of some (even fully).In 5 polymorphic nucleotides, 4 (among the IGS4A/BDNA the 947th, 999,1202 and 1216) causes the transformation of amino acids coding residue, and the 5th (among the IGS4A/BDNA the 1381st) is positioned at 3 '-UTR.Yu Ce protein sequence is called IGS4APROT (SEQ ID NO:2 and SEQID NO:4) and IGS4BPROT (SEQ ID NO:6 and SEQ ID NO:8) separately.(note 1: in this file, IGS4APROT and the longest possibility (415 the amino acid) sequence of IGS4BPROT sequence representative, but should be appreciated that actual protein may be at deficient 3 amino acid of N-terminal; Therefore, preceding 3 amino acid of IGS4APROT and IGS4BPROT have bracketed with bracket in table 4 and the table 5) (note 2: in this file, IGS4 refers to general IGS4 sequence, and does not consider concrete allelic gene type).The IGS4 protein sequence shows the (numbering 043664 with people orphan GPCR FM-3 to the homology search of disclosed domain protein matter database; People such as C.P.Tan, genomics (Genomics) 52:223-229,1998) have a best homology (in IGS4A 26-342 amino acids, having 46% identity).
IGS4 cDNA sequence has produced many clauses and subclauses to the homology search of DNA database, and they also are by IGS4 locus deutero-(Fig. 2 is seen in general introduction):
3 '-UTR deutero-10 est sequence clauses and subclauses (numbering W61169, AI432384, W61131, AI023570, F01358, F03770, Z38158, R40869, R37725 and H11333), 2 STS (sequence tagged site) (numbering G20615 and G05725) and 1 genome sequence (numbering AQ078563) have been found all by IGS4 cDNA.
A 3 ' end of EST numbering N45474 coding IGS4 encoding sequence and the part (seeing above) of 3 '-UTR.
" working-draft " high-throughput genome sequence of having found to be assembled with random order (numbering AC008571 by 42 unsorted contigs, version AC008571.1, preservation on August 3 in 1999), wherein we detect complete IGS4cDNA sequence 4 separate areas.These zones are most possible corresponding to different IGS4 exons, because their flank is exactly the donor splicing site and the receptor sequence of standard.According to this analysis, the position of different exons can be defined as follows in IGS4ADNA (or IGS4BDNA) sequence: exons 1 (1-780 position), exon 2 (781-865 position), exon 3 (866-991 position) and exon 4 (992-1658 position).The AC008571 genome sequence belongs to the IGS4A allelotype.
Found 6 overlapping EST clauses and subclauses (numbering H11359, R13890, R13353, F07531, F05108 and F05107), wherein Zhuan Pei dna sequence dna overlaps at the front end of its 3 ' end with IGS4 exon 2 and exon 3.Yet the dna sequence dna of exon 2 upstream is different fully with the IGS4 exons 1.Possible these 6 EST are by the transcript deutero-that is derived from other promotor.
2 genome sequence clauses and subclauses (numbering AQ019411 and AQ015065) of coding exon 2 have been found at last.
At us in above-mentioned different experiments among the isolating many IGS4 cDNA clone, except the many clones of transcript deutero-by not montage (or part montage), we have also found to comprise many clones of 64bp (the 866-929 position among the IGS4ADNA) deletion.So far, we have only found the truncated transcripts basis of polymorphism A type.We are called IGS4A-64DNA (SEQ ID NO:9 and SEQ ID NO:11) with this splice variant cDNA sequence.Because this deletion betides exon 2/exon 3 border accurately, and are " AG " through deleting segmental last 2 Nucleotide, therefore may the other montage incident of this deletion representative, wherein " AG " in the exon 3 is as acceptor splicing site.The reading frame displacement takes place in deletion point back in the IGS4A reading frame by this splice variant coding.(brachymemma) 296 amino acid whose protein of coding are called IGS4A-64PROT (SEQ ID NO:10 and SEQ ID NO:12).The hydrophilicity analysis of IGS4A-64PROT sequence shows that this protein only comprises 5 membrane spaning domains (corresponding to the TM structural domain 1-5 of IGS4APROT).The acceptor of this brachymemma may have the physiology dependency.
After on coating the LB agar plate that contains 100 μ g/ml penbritins, the bacterial isolates that will comprise plasmid HNT2322 (comprise IGS4ADNA insert fragment) is time cloning again, and is preserved in the Centraalbureau voor Schimmelculturen (CBS) (numbering CBS102221) of Innogenetics N.V. bacterial strain table (ICCG4320) and Dutch Baarn.Prepare plasmid DNA by the isolate of time cloning again, and check order once more, find identical with the IGS4ADNA sequence to inserting fragment.
After on coating the LB agar plate that contains 100 μ g/ml penbritins, the bacterial isolates that will comprise plasmid HNT2363 (comprise IGS4BDNA insert fragment) is time cloning again, and is preserved in the Centraalbureau voor Schimmelculturen (CBS) (numbering CBS102222) of Innogenetics N.V. bacterial strain table (ICCG4340) and Dutch Baarn.Prepare plasmid DNA by the isolate of time cloning again, and check order once more, find identical with the IGS4BDNA sequence to inserting fragment.
Embodiment 2: by Neuromedin U inductive cellular calcium concentration specific variations in CHOG α 16-IGS4 cell
Embodiment 2a: experiment flow: method and material
A. the method and the material that are used for IGS4 transfection CHOG α 16 cells
Used following material in the experiment: the carrier (IGS4-pcDNA3.1) that comprises the IGS4DNA sequence; SuperFect transfection reagent (Qiagen); The Nut-Mix F12 (Gibco) that contains 10%FCS; 0.028mg/ml gentamicin (Gibco); 0.22mg/ml Totomycin (Gibco).
The material that is used for clonal selection: the Nut-Mix F12 that contains 10%FCS; 0.028mg/ml gentamicin; 0.22mg/ml Totomycin; With 0.55mg/ml Geneticin (Gibco).
Used following method: as described in manufacturers (Qiagen), carry out transfection with the SuperFect transfection reagent.Cell is layered in 24 orifice plates to 50% converges.Each hole adds 0.6 μ g/ μ l plasmid DNA and 1 μ l SuperFect transfection reagent.After 24 hours, change substratum, and select to clone through transfectional cell by the selection substratum that contains Geneticin.Identify the cell clone of expressing IGS4 by RT-PCR and Northern trace.
B. the method and the material that are used for the FLIPR experiment
The preparation of cell:
For cell preparation, adopted following material: flat board: 96 orifice plates (Costar) in limpid, flat, black hole; Substratum: growth medium: the Nut-Mix F12 (HAM) that contains Glutamax (Gibco) that adds 10% foetal calf serum (Gibco); Incubator: 5%CO 2, 37 ℃ (Nuaire).
Method is carried out as follows: before experiment 24 or 48 hours, seed cells in the black wall microtest plate.Cultured cells density was 0.8 * 10 in 48 hours -4Cells/well, cultured cells density was 2.2 * 10 in 24 hours -4Cells/well.All under aseptic condition, carry out in steps.
Dyestuff loads:
In order to observe the variation of cellular calcium level, cell necessary " loading " is to calcium sensitive fluorescence dye.This dyestuff is called FLUO-4 (Molecular Probes), only when forming mixture with calcium, just can be excited at 488nm, and send the light of 500-560nm scope.This dyestuff uses under 4 μ M final concentrations.Add Pluronic acid and improve the picked-up of the solubleness of dyestuff and cell dyestuff.In dye media, add Probenicid (a kind of anion-exchange protein matter inhibitor) to improve the maintenance of dyestuff in cell.
Used following material:
2mM stock staining solution: 1mg Fluo-4 (Molecular Probes) is dissolved in the low water DMSO (Sigma) of 443 μ l.Packing is stored in-20 ℃.
20%pluronic acid solution: 400mg pluronic acid (Sigma) is dissolved in the low water DMSO (Sigma) of 2ml in 37 ℃.Be stored in room temperature.
Dyestuff/pluronic acid mixture: before facing use, isopyknic stock staining solution is mixed with 20%pluronic acid.The final concentration of dyestuff and pluronic acid is respectively 1mM and 10%.
250mM Probenicid stoste: 710mg Probenicid (Sigma) is dissolved in 5ml 1N NaOH, and mixes with the phenol red HankShi BSS (Gibco) that do not contain of 5ml interpolation 20mM HEPES.
What loading buffer liquid: 10.5ml added 20mM HEPES does not contain phenol red HankShi BSS (Gibco), 105 μ l Probenicid and 210 μ l 1M HEPES.
Cleaning buffer solution: that adds 20mM HEPES (Gibco) and 2.5mM Probenicid does not contain phenol red HankShi BSS (Gibco).
Method is carried out as follows: face be added in the loading buffer liquid before, 2mM stock staining solution and 20% (w/v) Pluronic acid equal-volume is mixed.By sucking-off growth medium in the hole, and do not stir the cellular layer that converges.Use Multidrop (Labsystems) that 100 μ l load mediums are assigned in each hole.With cell at 5%CO 2, insulation 30 minutes in 37 ℃ the incubator.In order to calculate background fluorescence, some hole is loading dye not.The background fluorescence in these holes is from the autofluorescence of cell.Behind the loading dye, clean cell 3 times, basic fluorescence is reduced to counts 20.000-25.000 more than the background with cleaning buffer solution (automatization Denley cell cleanser).Add 100 μ l damping fluids, and will cell in 37 ℃ of insulations, until beginning experiment.
C. the preparation of compound flat board
Prepare 3 μ M (3 of final concentration *) peptide and be used for preliminary screening.For the concentration response curve, the peptide solution of preparation concentration range 30 μ M-100nM.All peptides all are to dilute in the damping fluid that contains 0.1%BSA (Sigma).
Used following material: peptide: pig Neuromedin U 25, rat Neuromedin U 23, pig Neuromedin U 8 (Bachem); Dilution buffer liquid: that adds 20mM HEPES (Gibco) and 0.1%BSA (Sigma) does not contain phenol red HankShi BSS (Gibco); Dull and stereotyped: limpid, flat 96 orifice plates (Costar).
D. experiment
FLIPR is provided with parameter and is arranged to O.4sec exposure time, and filter 1,50 μ l fluid adds, pipettor height 125 μ l, and dispensing rate 40 μ l/sec do not mix.
Embodiment 2b: result
In order to identify the endogenous ligands of orphan's g protein coupled receptor (GPCR) IGS4, IGS4 (two kinds of forms of IGS4A and IGS4B) is stably transfected in Chinese hamster ovary (CHO) cell.Owing to do not know the G albumen coupling mechanism of IGS4, use specific Chinese hamster ovary celI strain.These Chinese hamster ovary celI stably express G Protein G α 16 (CHOG α 16, Molecular Devices), it is GPCR " general linker " (G.Milligan, F.Marshall and S.Rees, " G α 16 as general G albumen linker: the hint of agonist screening strategy " (G α 16 as auniversal G protein adapter:implications for agonistscreening strategies.), TIPS 17:235-237,1996).
The CHOG α 16-IGS4 cell that produces is carried out functional screening on fluorescence imaging plate reader (FLIPR), measure and reply the cellular calcium mobilization of inferring the peptide part.At the concentration 10nM of Neuromedin U 23, induced bigger, instantaneous and intensive calcium is replied.On the contrary, CHOG α 16 cells of CHOG α 16 cells and the another kind of irrelevant orphan GPCR of expression are not replied Neuromedin U 23.Use these experimental results of IGS4B to be shown in Fig. 4.
In addition, investigated IGS4 activate concentration dependent to pig and rat Neuromedin U isomer (for IGS4A and IGS4B the two).In scope 10 -5-10 -12In the M, pig Neuromedin U 25, rat Neuromedin U 23, pig Neuromedin U 8 are induced the special calcium mobilization by the IGS4 mediation in the FLIPR experiment.All 3 kinds of Neuromedin U isomer of test all cause the identical maximum activation of IGS4B, LogEC 50Value is-10.09 ± 0.08 (Neuromedin U 8, n=4; 80pM) ,-10.61 ± 0.08 (Neuromedin U 23, n=10; 50pM) and-9.14 ± 0.09 (Neuromedin U 25, n=3; 1.2nM).Therefore, all 3 kinds of peptides all cause the particularly strong activation of IGS4B, illustrate that Neuromedin U is the natural agonist of this receptor.Use these experimental results of IGS4B to be shown in Fig. 3 a (Neuromedin U 8), Fig. 3 b (Neuromedin U 23) and Fig. 3 c (Neuromedin U 25).
For the IGS4A acceptor, found to hang down the avidity of any a little, but shown that still the Neuromedin U peptide is the better part of general IGS4 acceptor.The LogEC of IGS4A 50Be worth as follows: the LogEC of Neuromedin U 8 50Value=-9.3 ± 0.09 (n=1; 485pM); The LogEC of Neuromedin U 23 50Value=-7.27 ± 0.16 (n=6; 53nM); LogEC with Neuromedin U 25 50Value=-6.18 ± 0.14 (n=3; 658nM).
Neuromedin U activates the G albumen that the calcium mobilization who sees behind the IGS4 replys explanation this receptor coupling Gq/11 subtribe.In addition, cAMP basal level is not subjected to the regulation and control of pig Neuromedin U 8 (1 and 10 μ M) in the born of the same parents of CHOG 16-IGS4 cell, illustrate this receptor not with the G albumen coupling (data does not show) of Gs subtribe.
Embodiment 3: many tissue expressions of people array (MTE TM) on IGS4 hybridization
Use Prime-It II test kit TM(Stratagene), mix by causing at random [α- 32P] dCTP with people IGS4A DNA (from pGEMT-hIGS4A[ICCG#4320] ± 730bpBamHI/HindIII inserts fragment) radio-labeling to than work>10 9Cpm/ μ g.To come through label probe and free label purifying by Sephadex G-50 chromatography,, and add the ExpressHyb hybridization solution to final concentration 1-1.5 * 10 in 95 ℃ of sex change 5min 6Pm/ml.With reference to supplier's recommendation, with the many tissue expression (MTE of people TM) array (Clontech, catalog number 7775-1) spends the night in 65 ℃ of prehybridization 30min and hybridization in ExpressHyb liquid.
With the MTE of having hybridized TMArray cleans 20min, 5 times with 2 * SSC/1%SDS in 65 ℃; Use 0.1 * SSC/0.5%SDS to clean 20min, 2 times then in 55 ℃.After the cleaning, (Cycolone Storage Phosphor System Packard) makes array radioautograph (Fig. 5) by the phosphorescence imaging.Use OptiQuant image analysis software (Packard) quantitative analysis MTE TMThe hybridization data of array.Strength of signal to the different speckle displacements that comprise RNA is proofreaied and correct the average background signal that is obtained by blank position.The strength of signal that is obtained by the spot that comprises e. coli dna is considered the sample that representative does not show that IGS4 expresses.It is negative that the sample that strength of signal is lower than e. coli dna is considered.
By deducting by each value, recomputate the hybridization signal of different tissues on the RNA array by the observed hybridization signal of e. coli dna (thinking that it is a background signal).Show low hybridization signal be considered in a organized way and be lower than background, and be the IGS4 feminine gender.To draw with respect to the expression level in the testis (100%), be provided in Fig. 7.
The Northern engram analysis of embodiment 4:IGS4 tissue distribution
Use Prime-It II test kit TM(Stratagene), mix by causing at random [α- 32P] dCTP with people IGS4A DNA (from pGEMT-hIGS4A[ICCG#4320] ± 730bpBamHI/HindIII inserts fragment) radio-labeling to than work>10 9Cpm/ μ g.To come through label probe and free label purifying by Sephadex G-50 chromatography,, and add the ExpressHyb hybridization solution to final concentration 1-1.5 * 10 in 95 ℃ of sex change 5min 6Cpm/ml.With reference to supplier's recommendation, (Clontech, catalog number 7760-1,7759-1,7767-1,7755-1 and 7769-1) spends the night in 65 ℃ of prehybridization 30min and hybridization in ExpressHyb liquid with people Northern trace.
After the hybridization, the Northern trace is cleaned 10min with 2 * SSC/0.05%SDS in room temperature, 4 times; Use 0.1 * SSC/0.1%SDS to clean 40min, 2 times then in 50 ℃.After the cleaning, (Cycolone Storage Phosphor System Packard) makes the radioautograph of Northern trace with X-ray film to use phosphorescent substance to store flat board.The Northern trace the results are shown in Fig. 6.
As if the result of Northern engram analysis be consistent with hybridization array (embodiment 3) to a great extent.In testis, found the strongest so far signal (2.4kb transcript).In thymus gland, spinal cord, medullary substance, Tiroidina, thalamus and black substance, find more weak 2.4kb band, in corpus callosum, caudatum and stomach, found very weak band.For some tissues, on Northern, can't see the 2.4kb band, and on the MTE array, observe strong to medium hybridization signal (as full brain, pallium, lung, temporal lobe and frontal lobe, tonsilla, cerebellum, kidney, and hippocampus).
Embodiment 5: the quantitative RT-PCR analysis
Also use LightCycler TMInstrument (Roche Diagnostics) and the special TaqMan of IGS4 TMProbe by real-time quantitative RT-PCR (Q-PCR), has been measured the IGS4 expression level in the different people tissue.
Embodiment 5a: experiment flow
A.cDNA is synthetic
Before reverse transcription, will be from human total rna group I to V (Clontech, catalog number K4000-1 to K4004-1) the total RNA of 3 μ g 3U DNAse I (Life Technologies, catalog number 18068-015) in 30 μ l reaction volumes (20mM Tris pH8.3,50mM KCl, 2mM KCl) in room temperature treatment 15 minutes, to destroy the genomic dna that may pollute.Add 3 μ l 25mM EDTA and came termination reaction in 10 minutes in 65 ℃ of heating.With RNA and 1.3 μ g oligo (dT) (the Life Technologiess of 2.6 μ g through the processing of DNA enzyme, catalog number 18418-012) annealing, and the scheme of using Omniscript reversed transcriptive enzyme (Qiagen, catalog number 205111) reference enzyme supplier to recommend was carried out reverse transcription in 1 hour in 37 ℃ of insulations in 52 μ l reaction volumes.In 5 minutes deactivation Omniscript reversed transcriptive enzymes of 93 ℃ of heating.
B.Q-PCR
Quantitative PCR is reflected in the 20 μ l reaction mixtures and carries out, and wherein comprises 1 * TaqMan TMUniversal PC R Mastermix (PE Applied Biosystems, catalog number 4304437), 0.12mg/ml BSA, the special forward of 900nM IGS4 and reverse primer (IP14,963 and IP14,964), the special TaqMan of 250nM IGS4 TM(GAPDH: glyceraldehyde-3-phosphate dehydrogenase) the cDNA synthesis reaction solution is as template for probe (IP14,962) and 1.6 μ l (IGS4) or 0.16 μ l.In order to set up the IGS4 typical curve, used serial dilution (10 7-10 1Copy/reaction) IGS4 plasmid ICCG4320; And for the GAPDH typical curve, the human brain cDNA synthesis reaction solution (0.16 μ l, 0.016 μ l and 0.0016 μ l) that uses serial dilution is as template.1 * TaqMan TMUniversal PC R Mastermix comprises AmpliTaq Gold TMArchaeal dna polymerase, AmpErase TMUNG (uridylic-N-glycosylase), the dNTP mixture that contains dUTP, passivereference and the damping fluid composition of optimizing.IGS4 special primer and TaqMan probe are to use Primer Express TMSoftware (PE Applied Biosystems) design.With the described identical condition of IGS4 under carry out the quantitative PCR reaction of people GADPH, difference is to use from TaqMan TMGAPDH contrast agents box (PE Applied Biosystems, catalog number 402869; Sequence information can not be obtained by PE Applied Biosystems) GAPDH special primer and TaqMan TMProbe.
PCR is reflected at the LightCycler instrument TMGlass capillary in carry out.At first be incubated 2 minutes to carry out AmpErase in 50 ℃ TMAfter the UNG reaction (thereby start and activate AmpliTaq GoldDNA polysaccharase (95 ℃ of 10min)), with reaction mixture carry out 40 round-robin sex change (95 ℃, 15sec) and annealing/extension (60 ℃ [GAPDH] or 68 ℃ [IGS4], 1min).Use the quantitative of 3.0 editions samples that experimentize of LightCycler software.In IGS4 plasmid copy scope 10-107, acquisition better linearity dependency between the release of the amount of IGS4 plasmid and report dyestuff.We also use GAPDH TaqMan TMProbe, the brain cDNA of use serial dilution has obtained linear standard curve.The GAPDH expression level is in the 0.4-10.2% scope of skeletal muscle relatively, and skeletal muscle has the highest GAPDH expression level in all test organizations.The IGS4 expression level is stated the ratio with respect to detection level in the spinal cord as relatively, and spinal cord has the highest IGS4 expression (Fig. 8) in all test organizations.We are also after carrying out stdn to the expression of GAPDH housekeeping gene, with relative IGS4 expression level drawing (Fig. 8).
Embodiment 5b: result
Use the Q-PCR of the special TaqMan probe of IGS4 to show, in spinal cord, found high expression level (not to the GAPDH stdn).IGS4 expression level in the spinal cord amount to 11,467 copy mRNA/ng pA RNA (efficient of supposition cDNA building-up reactions is 100%, and supposition pA RNA account for total RNA 2%).Also in brain (spinal levels 41%), skeletal muscle (37%), cerebellum (31%), testis (19%), lung (12%) and the heart (11%), found high IGS4 expression level.In tire brain (5%), tracheae (4%), prostate gland (2%) and Tiroidina (1.4%), find to have lower level.After GAPDH expression stdn, the IGS4 expression pattern remains unchanged to a great extent relatively, and except skeletal muscle is exception, wherein relative expression's level falls to 2% of spinal cord.Because whether unclear stdn to GADPH is correct program (the GAPDH expression level expects that in different cell/tissue types variation is bigger or less), we would rather pay close attention to not standardized relative expression's level.
As if recognize one of the seemingly the most significant expression of testis, spinal cord and brain site, these Q-PCR data meet the expression data from RNA array (embodiment 3) and Northern trace (embodiment 4) hybrid experiment.Yet Q-PCR analyzes and shows also in many other tissues that important expression is arranged, such as skeletal muscle, cerebellum, lung and the heart.
Do not knowing that the someone proposes under the situation of special acceptor, the part Neuromedin U is neuropeptide or neuromodulator (J.Domin, M.A.Ghatei, P.Chohan and S.R.Bloom, peptide (Peptides) 8:779-784,1987).Our investigation shows that IGS4 is the newcomer of Neuromedin U receptor family, expresses in CNS and PNS zone, gastro-intestinal system, immunity system, urogenital system, cardiovascular systems, skeletal muscle, Tiroidina and lung.
Table 8: be used for the PCR Oligonucleolide primers of IGS4 Q-PCR reaction and the general introduction of TaqMan probe
SEQ ID NO:32 IP 14,963 5′-CCTCTTCAGCCTGGCGGTCTCTG-3′
SEQ ID NO:33 IP 14,964 5′-GGAGGCGAAGCACACGGTCTCA-3′
SEQ ID NO:34 IP 14,962 5′(FAM)-AGATGTGGCGCAACTACCCTTTCTTGTTCGGGCC- (TAMRA)3′
All that quote in this specification sheets are delivered thing, include but not limited to patent and patent application, and complete being collected herein by reference specified just as specific and discrete independent complete being collected herein by reference of thing of delivering listed as complete.
The summary of figure
Fig. 1: the synoptic diagram that separates the relative position that is used to produce the different cDNA clones that have the IGS4cDNA sequence.Also pointed out used 5 ' and 3 ' RACE primer (being respectively IGS4R# and IGS4F#), and the position of EST numbering N45474.Primer I GS4R6 is positioned at introne 1.Just part order-checking of some clone (as HNT2311, HNT2312 and HNT2253) (only having pointed out the part of order-checking).Consensus sequence A and consensus sequence B represent the consensus sequence of IGS4 allelic gene type A and B respectively.Each clone is pointed out (shaded boxes) Nucleotide of identifying in everywhere, 4 polymorphism positions.Sequence difference among " S " expression clone HNT2211 and the HNT2212 refers to " C " or " T ".Indicate with " * * " coding region of IGS4A and IGS4B consensus sequence.Because there are some residue sequence differences in 5 ' end of consensus sequence, IGS4ADNA and IGS4BDNA sequence are just extremely terminal by the 86th.
Fig. 2: different DNA data base entries are with respect to the synoptic diagram of the relative position of IGS4cDNA sequence.IGS4 cDNA sequence is indicated (indicate with solid box the position of IGS4 encoding sequence) with box.On IGS4 cDNA sequence, pointed out ("==") relative position of IGS4 exons 1-4.The part of exons 1->4 of encoding among the genome sequence AC008571 is used AC008571a->d indication respectively.These segmental positions in the AC008571 sequence are: AC008571a (the 13129-13908 position of AC008571 reverse complemental), AC008571b (the 51676-51760 position of AC008571), AC008571c (the 79978-80103 position of AC008571 reverse complemental) and AC008571d (the 83060-83728 position of AC008571 reverse complemental).G05725 and G20615 are STS (sequence of sequence identifier) clauses and subclauses, and F05107, F05108, F07531, R13353, R13890, H11359, N45474, W61169, AI432384, W61131, AI023570, F01358, F03770, Z38158, R40869, R37725 and H11333 are the EST clauses and subclauses.The part that comprises the IGS4 exon 2 among genomic clone AQ019411 and the AQ015065 is indicated with ": ".Indicate with " * " with the 5 ' part of the diverse est sequence F05107 of IGS4cDNA sequence, F05108, F07531, R13353, R13890 and H11359.AQ078563 is a genomic clone.
Fig. 3: different Neuromedin U isomer are to the activation of IGS4 acceptor.With CHOG α 16-IGS4B cell overnight incubation in 96 orifice plates, and load Fluo-4AM.Measure by receptor-mediated Ca with FLIPR (MolecularDevices) 2+Change.To be standardized into 1 by maximum variation of the detected fluorescence of CCD photographic camera, and state counting as.
Fig. 3 a: the result of Neuromedin U 8;
Fig. 3 b: the result of Neuromedin U 23;
Fig. 3 c: the result of Neuromedin U 25.
Fig. 4: Neuromedin U 23 is induced Ca in the born of the same parents in CHOG α 16 cells of expressing IGS4B 2+Mobilize.Pair cell is CHOG α 16-IGS4, CHOG α 16 and uses 10nM Neuromedin Us 23 with the CHOG α 16 of another kind of orphan GPCR transfection.Culturing cell spends the night in 96 orifice plates, and loads Fluo-4AM.Measure by Ca in the receptor-mediated born of the same parents with FLIPR (Molecular Devices) 2+Change, state as by the detected counting of CCD photographic camera.
Fig. 5: many tissue expressions of people array of end user IGS4 probe.
Fig. 6: the Northern engram analysis that uses the IGS4 probe.
Fig. 7: IGS4 expression analysis (MTE trace).
Fig. 8: IGS4mRNA is with respect to relative expression's level of observed expression in spinal cord.The standardized two kinds of expression levels of not stdn and GAPDH have been shown.
Sequence table
<110>SOLVAY PHARMACEUTICALS B.V.
<120〉new human G protein-coupled receptor
<130>SPW99.06/HA 00.19
<140>
<141>
<160>34
<170>PatentIn Ver.2.1
<210>1
<211>1658
<212>DNA
<213〉human (Homo sapiens)
<220>
<221>CDS
<222>(55)..(1299)
<223〉IGS4A elongated
<400>1
ggctcagctt gaaacagagc ctcgtaccag gggaggctca ggccttggat ttta atg 57
Met
1
tca ggg atg gaa aaa ctt cag aat gct tcc tgg atc tac cag cag aaa 105
Ser Gly Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys
5 10 15
cta gaa gat cca ttc cag aaa cac ctg aac agc acc gag gag tat ctg 153
Leu Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu
20 25 30
gcc ttc ctc tgc gga cct cgg cgc agc cac ttc ttc ctc ccc gtg tct 201
Ala Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser
35 40 45
gtg gtg tat gtg cca att ttt gtg gtg ggg gtc att ggc aat gtc ctg 249
Val Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu
50 55 60 65
gtg tgc ctg gtg att ctg cag cac cag gct atg aag acg ccc acc aac 297
Val Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn
70 75 80
tac tac ctc ttc agc ctg gcg gtc tct gac ctc ctg gtc ctg ctc ctt 345
Tyr Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu
85 90 95
gga atg ccc ctg gag gtc tat gag atg tgg cgc aac tac cct ttc ttg 393
Gly Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu
100 105 110
ttc ggg ccc gtg ggc tgc tac ttc aag acg gcc ctc ttt gag acc gtg 441
Phe Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val
115 120 125
tgc ttc gcc tcc atc ctc agc atc acc acc gtc agc gtg gag cgc tac 489
cys Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr
130 135 140 145
gtg gcc atc cta cac ccg ttc cgc gcc aaa ctg cag agc acc cgg cgc 537
Val Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg
150 155 160
cgg gcc ctc agg atc ctc ggc atc gtc tgg ggc ttc tcc gtg ctc ttc 585
Arg Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe
165 170 175
tcc ctg ccc aac acc agc atc cat ggc atc aag ttc cac tac ttc ccc 633
Ser Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro
180 185 190
aat ggg tcc ctg gtc cca ggt tcg gcc acc tgt acg gtc atc aag ccc 681
Asn Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro
195 200 205
atg tgg atc tac aat ttc atc atc cag gtc acc tcc ttc cta ttc tac 729
Met Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr
210 215 220 225
ctc ctc ccc atg act gtc atc agt gtc ctc tac tac ctc atg gca ctc 777
Leu Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu
230 235 240
aga cta aag aaa gac aaa tct ctt gag gca gat gaa ggg aat gca aat 825
Arg Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn
245 250 255
att caa aga ccc tgc aga aaa tca gtc aac aag atg ctg ttt gtc ttg 873
Ile Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val Leu
260 265 270
gtc tta gtg ttt gct atc tgt tgg gcc ccg ttc cac att gac cga ctc 921
Val Leu Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg Leu
275 280 285
ttc ttc agc ttt gtg gag gag tgg agt gaa tcc ctg gct gct gtg ttc 969
Phe Phe Ser Phe Val Glu Glu Trp Ser Glu Ser Leu Ala Ala Val Phe
290 295 300 305
aac ctc gtc cat gtg gtg tca ggt gtc ttc ttc tac ctg agc tca gct 1017
Asn Leu Val His Val Val Ser Gly Val Phe Phe Tyr Leu Ser Ser Ala
310 315 320
gtc aac ccc att atc tat aac cta ctg tct cgc cgc ttc cag gca gca 1065
Val Asn Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala Ala
325 330 335
ttc cag aat gtg atc tct tct ttc cac aaa cag tgg cac tcc cag cat 1113
Phe Gln Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln His
340 345 350
gac cca cag ttg cca cct gcc cag cgg aac atc ttc ctg aca gaa tgc 1161
Asp Pro Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu Cys
355 360 365
cac ttt gtg gag ctg acc gaa gat ata ggt ccc caa ttc cca tgt cag 1209
His Phe Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Pro Cys Gln
370 375 380 385
tca tcc atg cac aac tct cac ctc cca aca gcc ctc tct agt gaa cag 1257
Ser Ser Met His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu Gln
390 395 400
atg tca aga aca aac tat caa agc ttc cac ttt aac aaa acc 1299
Met Ser Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
405 410 415
tgaattcttt cagagctgac tctcctctat gcctcaaaac ttcagagagg aacatcccat 1359
aatgtatgcc ttctcatatg atattagaga ggtagaatgg ctcttacaac tcatgtaccc 1419
attgctagtt tttttttttt aataaacgtg aaaactgaga gttagatctg gtttcaaaac 1479
ccaagactgc ctgattttta gttatctttc cactatccta actgcctcat gccccttcac 1539
tagttcatgc caagaacgtg actggaaagg catggcacct ataccttgat taatttccat 1599
taatggaaat ggttcgtcct gagtcatcta cgttccgagt caggctgtca ctcctacta 1658
<210>2
<211>415
<212>PRT
<213〉mankind
<400>2
Met Ser Gly Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln
1 5 10 15
Lys Leu Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr
20 25 30
Leu Ala Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val
35 40 45
Ser Val Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val
50 55 60
Leu Val Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr
65 70 75 80
Asn Tyr Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu
85 90 95
Leu Gly Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe
100 105 110
Leu Phe Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr
115 120 125
Val Cys Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg
130 135 140
Tyr Val Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg
145 150 155 160
Arg Arg Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu
165 170 175
Phe Ser Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe
180 185 190
Pro Asn Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys
195 200 205
Pro Met Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe
210 215 220
Tyr Leu Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala
225 230 235 240
Leu Arg Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala
245 250 255
Asn Ile Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val
260 265 270
Leu Val Leu Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg
275 280 285
Leu Phe Phe Ser Phe Val Glu Glu Trp Ser Glu Ser Leu Ala Ala Val
290 295 300
Phe Asn Leu Val His Val Val Ser Gly Val Phe Phe Tyr Leu Ser Ser
305 310 315 320
Ala Val Asn Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala
325 330 335
Ala Phe Gln Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln
340 345 350
His Asp Pro Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu
355 360 365
Cys His Phe Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Pro Cys
370 375 380
Gln Ser Ser Met His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu
385 390 395 400
Gln Met Ser Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
405 410 415
<210>3
<211>1658
<212>DNA
<213〉mankind
<220>
<221>CDS
<222>(64)..(1299)
<223〉the short type of IGS4A
<400>3
ggctcagctt gaaacagagc ctcgtaccag gggaggctca ggccttggat tttaatgtca 60
ggg atg gaa aaa ctt cag aat gct tcc tgg atc tac cag cag aaa cta 108
Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys Leu
1 5 10 15
gaa gat cca ttc cag aaa cac ctg aac agc acc gag gag tat ctg gcc 156
Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu Ala
20 25 30
ttc ctc tgc gga cct cgg cgc agc cac ttc ttc ctc ccc gtg tct gtg 204
Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser Val
35 40 45
gtg tat gtg cca att ttt gtg gtg ggg gtc att ggc aat gtc ctg gtg 252
Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu Val
50 55 60
tgc ctg gtg att ctg cag cac cag gct atg aag acg ccc acc aac tac 300
Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn Tyr
65 70 75
tac ctc ttc agc ctg gcg gtc tct gac ctc ctg gtc ctg ctc ctt gga 348
Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu Gly
80 85 90 95
atg ccc ctg gag gtc tat gag atg tgg cgc aac tac cct ttc ttg ttc 396
Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu Phe
100 105 110
ggg ccc gtg ggc tgc tac ttc aag acg gcc ctc ttt gag acc gtg tgc 444
Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val Cys
115 120 125
ttc gcc tcc atc ctc agc atc acc acc gtc agc gtg gag cgc tac gtg 492
Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr Val
130 135 140
gcc atc cta cac ccg ttc cgc gcc aaa ctg cag agc acc cgg cgc cgg 540
Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg Arg
145 150 155
gcc ctc agg atc ctc ggc atc gtc tgg ggc ttc tcc gtg ctc ttc tcc 588
Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe Ser
160 165 170 175
ctg ccc aac acc agc atc cat ggc atc aag ttc cac tac ttc ccc aat 636
Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro Asn
180 185 190
ggg tcc ctg gtc cca ggt tcg gcc acc tgt acg gtc atc aag ccc atg 684
Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro Met
195 200 205
tgg atc tac aat ttc atc atc cag gtc acc tcc ttc cta ttc tac ctc 732
Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr Leu
210 215 220
ctc ccc atg act gtc atc agt gtc ctc tac tac ctc atg gca ctc aga 780
Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu Arg
225 230 235
cta aag aaa gac aaa tct ctt gag gca gat gaa ggg aat gca aat att 828
Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn Ile
240 245 250 255
caa aga ccc tgc aga aaa tca gtc aac aag atg ctg ttt gtc ttg gtc 876
Gln Arg Pro cys Arg Lys Ser Val Asn Lys Met Leu Phe Val Leu Val
260 265 270
tta gtg ttt gct atc tgt tgg gcc ccg ttc cac att gac cga ctc ttc 924
Leu Val Phe Ala Ile cys Trp Ala Pro Phe His Ile Asp Arg Leu Phe
275 280 285
ttc agc ttt gtg gag gag tgg agt gaa tcc ctg gct gct gtg ttc aac 972
Phe Ser Phe Val Glu Glu Trp Ser Glu Ser Leu Ala Ala Val Phe Asn
290 295 300
ctc gtc cat gtg gtg tca ggt gtc ttc ttc tac ctg agc tca gct gtc 1020
Leu Val His Val Val Ser Gly Val Phe Phe Tyr Leu Ser Ser Ala Val
305 310 315
aac ccc att atc tat aac cta ctg tct cgc cgc ttc cag gca gca ttc 1068
Asn Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala Ala Phe
320 325 330 335
cag aat gtg atc tct tct ttc cac aaa cag tgg cac tcc cag cat gac 1116
Gln Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln His Asp
340 345 350
cca cag ttg cca cct gcc cag cgg aac atc ttc ctg aca gaa tgc cac 1164
Pro Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu Cys His
355 360 365
ttt gtg gag ctg acc gaa gat ata ggt ccc caa ttc cca tgt cag tca 1212
Phe Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Pro Cys Gln Ser
370 375 380
tcc atg cac aac tct cac ctc cca aca gcc ctc tct agt gaa cag atg 1260
Ser Met His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu Gln Met
385 390 395
tca aga aca aac tat caa agc ttc cac ttt aac aaa acc tgaattcttt 1309
Ser Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
400 405 410
cagagctgac tctcctctat gcctcaaaac ttcagagagg aacatcccat aatgtatgcc 1369
ttctcatatg atattagaga ggtagaatgg ctcttacaac tcatgtaccc attgctagtt 1429
tttttttttt aataaacgtg aaaactgaga gttagatctg gtttcaaaac ccaagactgc 1489
ctgattttta gttatctttc cactatccta actgcctcat gccccttcac tagttcatgc 1549
caagaacgtg actggaaagg catggcacct ataccttgat taatttccat taatggaaat 1609
ggttcgtcct gagtcatcta cgttccgagt caggctgtca ctcctacta 1658
<210>4
<211>412
<212>PRT
<213〉mankind
<400>4
Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys Leu Glu
1 5 10 15
Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu Ala Phe
20 25 30
Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser Val Val
35 40 45
Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu Val Cys
50 55 60
Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn Tyr Tyr
65 70 75 80
Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu Gly Met
85 90 95
Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu Phe Gly
100 105 110
Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val Cys Phe
115 120 125
Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr Val Ala
130 135 140
Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg Arg Ala
145 150 155 160
Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe Ser Leu
165 170 175
Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro Asn Gly
180 185 190
Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro Met Trp
195 200 205
Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr Leu Leu
210 215 220
Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu Arg Leu
225 230 235 240
Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn Ile Gln
245 250 255
Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val Leu Val Leu
260 265 270
Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg Leu Phe Phe
275 280 285
Ser Phe Val Glu Glu Trp Ser Glu Ser Leu Ala Ala Val Phe Asn Leu
290 295 300
Val His Val Val Ser Gly Val Phe Phe Tyr Leu Ser Ser Ala Val Asn
305 310 315 320
Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala Ala Phe Gln
325 330 335
Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln His Asp Pro
340 345 350
Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu Cys His Phe
355 360 365
Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Pro Cys Gln Ser Ser
370 375 380
Met His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu Gln Met Ser
385 390 395 400
Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
405 410
<210>5
<211>1658
<212>DNA
<213〉mankind
<220>
<221>CDS
<222>(55)..(1299)
<223〉IGS4B elongated
<400>5
ggctcagctt gaaacagagc ctcgtaccag gggaggctca ggccttggat ttta atg 57
Met
1
tca ggg atg gaa aaa ctt cag aat gct tcc tgg atc tac cag cag aaa 105
Ser Gly Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys
5 10 15
cta gaa gat cca ttc cag aaa cac ctg aac agc acc gag gag tat ctg 153
Leu Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu
20 25 30
gcc ttc ctc tgc gga cct cgg cgc agc cac ttc ttc ctc ccc gtg tct 201
Ala Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser
35 40 45
gtg gtg tat gtg cca att ttt gtg gtg ggg gtc att ggc aat gtc ctg 249
Val Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu
50 55 60 65
gtg tgc ctg gtg att ctg cag cac cag gct atg aag acg ccc acc aac 297
Val Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn
70 75 80
tac tac ctc ttc agc ctg gcg gtc tct gac ctc ctg gtc ctg ctc ctt 345
Tyr Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu
85 90 95
gga atg ccc ctg gag gtc tat gag atg tgg cgc aac tac cct ttc ttg 393
Gly Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu
100 105 110
ttc ggg ccc gtg ggc tgc tac ttc aag acg gcc ctc ttt gag acc gtg 441
Phe Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val
115 120 125
tgc ttc gcc tcc atc ctc agc atc acc acc gtc agc gtg gag cgc tac 489
Cys Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr
130 135 140 145
gtg gcc atc cta cac ccg ttc cgc gcc aaa ctg cag agc acc cgg cgc 537
Val Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg
150 155 160
cgg gcc ctc agg atc ctc ggc atc gtc tgg ggc ttc tcc gtg ctc ttc 585
Arg Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe
165 170 175
tcc ctg ccc aac acc agc atc cat ggc atc aag ttc cac tac ttc ccc 633
Ser Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro
180 185 190
aat ggg tcc ctg gtc cca ggt tcg gcc acc tgt acg gtc atc aag ccc 681
Asn Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro
195 200 205
atg tgg atc tac aat ttc atc atc cag gtc acc tcc ttc cta ttc tac 729
Met Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr
210 215 220 225
ctc ctc ccc atg act gtc atc agt gtc ctc tac tac ctc atg gca ctc 777
Leu Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu
230 235 240
aga cta aag aaa gac aaa tct ctt gag gca gat gaa ggg aat gca aat 825
Arg Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn
245 250 255
att caa aga ccc tgc aga aaa tca gtc aac aag atg ctg ttt gtc ttg 873
Ile Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val Leu
260 265 270
gtc tta gtg ttt gct atc tgt tgg gcc ccg ttc cac att gac cga ctc 921
Val Leu Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg Leu
275 280 285
ttc ttc agc ttt gtg gag gag tgg act gaa tcc ctg gct gct gtg ttc 969
Phe Phe Ser Phe Val Glu Glu Trp Thr Glu Ser Leu Ala Ala Val Phe
290 295 300 305
aac ctc gtc cat gtg gtg tca ggt gtc tta ttc tac ctg agc tca gct 1017
Asn Leu Val His Val Val Ser Gly Val Leu Phe Tyr Leu Ser Ser Ala
310 315 320
gtc aac ccc att atc tat aac cta ctg tct cgc cgc ttc cag gca gca 1065
Val Asn Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala Ala
325 330 335
ttc cag aat gtg atc tct tct ttc cac aaa cag tgg cac tcc cag cat 1113
Phe Gln Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln His
340 345 350
gac cca cag ttg cca cct gcc cag cgg aac atc ttc ctg aca gaa tgc 1161
Asp Pro Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu Cys
355 360 365
cac ttt gtg gag ctg acc gaa gat ata ggt ccc caa ttc cta tgt cag 1209
His Phe Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Leu Cys Gln
370 375 380 385
tca tcc gtg cac aac tct cac ctc cca aca gcc ctc tct agt gaa cag 1257
Ser Ser Val His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu Gln
390 395 400
atg tca aga aca aac tat caa agc ttc cac ttt aac aaa acc 1299
Met Ser Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
405 410 415
tgaattcttt cagagctgac tctcctctat gcctcaaaac ttcagagagg aacatcccat 1359
aatgtatgcc ttctcatatg aaattagaga ggtagaatgg ctcttacaac tcatgtaccc 1419
attgctagtt tttttttttt aataaacgtg aaaactgaga gttagatctg gtttcaaaac 1479
ccaagactgc ctgattttta gttatctttc cactatccta actgcctcat gccccttcac 1539
tagttcatgc caagaacgtg actggaaagg catggcacct ataccttgat taatttccat 1599
taatggaaat ggttcgtcct gagtcatcta cgttccgagt caggctgtca ctcctacta 1658
<210>6
<211>415
<212>PRT
<213〉mankind
<400>6
Met Ser Gly Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln
1 5 10 15
Lys Leu Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr
20 25 30
Leu Ala Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val
35 40 45
Ser Val Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val
50 55 60
Leu Val Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr
65 70 75 80
Asn Tyr Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu
85 90 95
Leu Gly Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe
100 105 110
Leu Phe Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr
115 120 125
Val Cys Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg
130 135 140
Tyr Val Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg
145 150 155 160
Arg Arg Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu
165 170 175
Phe Ser Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe
180 185 190
Pro Asn Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys
195 200 205
Pro Met Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe
210 215 220
Tyr Leu Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala
225 230 235 240
Leu Arg Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala
245 250 255
Asn Ile Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val
260 265 270
Leu Val Leu Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg
275 280 285
Leu Phe Phe Ser Phe Val Glu Glu Trp Thr Glu Ser Leu Ala Ala Val
290 295 300
Phe Asn Leu Val His Val Val Ser Gly Val Leu Phe Tyr Leu Ser Ser
305 310 315 320
Ala Val Asn Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala
325 330 335
Ala Phe Gln Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln
340 345 350
His Asp Pro Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu
355 360 365
Cys His Phe Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Leu Cys
370 375 380
Gln Ser Ser Val His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu
385 390 395 400
Gln Met Ser Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
405 410 415
<210>7
<211>1658
<212>DNA
<213〉mankind
<220>
<221>CDS
<222>(64)..(1299)
<223〉the short type of IGS4B
<400>7
ggctcagctt gaaacagagc ctcgtaccag gggaggctca ggccttggat tttaatgtca 60
ggg atg gaa aaa ctt cag aat gct tcc tgg atc tac cag cag aaa cta 108
Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys Leu
1 5 10 15
gaa gat cca ttc cag aaa cac ctg aac agc acc gag gag tat ctg gcc 156
Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu Ala
20 25 30
ttc ctc tgc gga cct cgg cgc agc cac ttc ttc ctc ccc gtg tct gtg 204
Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser Val
35 40 45
gtg tat gtg cca att ttt gtg gtg ggg gtc att ggc aat gtc ctg gtg 252
Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu Val
50 55 60
tgc ctg gtg att ctg cag cac cag gct atg aag acg ccc acc aac tac 300
Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn Tyr
65 70 75
tac ctc ttc agc ctg gcg gtc tct gac ctc ctg gtc ctg ctc ctt gga 348
Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu Gly
80 85 90 95
atg ccc ctg gag gtc tat gag atg tgg cgc aac tac cct ttc ttg ttc 396
Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu Phe
100 105 110
ggg ccc gtg ggc tgc tac ttc aag acg gcc ctc ttt gag acc gtg tgc 444
Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val Cys
115 120 125
ttc gcc tcc atc ctc agc atc acc acc gtc agc gtg gag cgc tac gtg 492
Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr Val
130 135 140
gcc atc cta cac ccg ttc cgc gcc aaa ctg cag agc acc cgg cgc cgg 540
Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg Arg
145 150 155
gcc ctc agg atc ctc ggc atc gtc tgg ggc ttc tcc gtg ctc ttc tcc 588
Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe Ser
160 165 170 175
ctg ccc aac acc agc atc cat ggc atc aag ttc cac tac ttc ccc aat 636
Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro Asn
180 185 190
ggg tcc ctg gtc cca ggt tcg gcc acc tgt acg gtc atc aag ccc atg 684
Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro Met
195 200 205
tgg atc tac aat ttc atc atc cag gtc acc tcc ttc cta ttc tac ctc 732
Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr Leu
210 215 220
ctc ccc atg act gtc atc agt gtc ctc tac tac ctc atg gca ctc aga 780
Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu Arg
225 230 235
cta aag aaa gac aaa tct ctt gag gca gat gaa ggg aat gca aat att 828
Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn Ile
240 245 250 255
caa aga ccc tgc aga aaa tca gtc aac aag atg ctg ttt gtc ttg gtc 876
Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val Leu Val
260 265 270
tta gtg ttt gct atc tgt tgg gcc ccg ttc cac att gac cga ctc ttc 924
Leu Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg Leu Phe
275 280 285
ttc agc ttt gtg gag gag tgg act gaa tcc ctg gct gct gtg ttc aac 972
Phe Ser Phe Val Glu Glu Trp Thr Glu Ser Leu Ala Ala Val Phe Asn
290 295 300
ctc gtc cat gtg gtg tca ggt gtc tta ttc tac ctg agc tca gct gtc 1020
Leu Val His Val Val Ser Gly Val Leu Phe Tyr Leu Ser Ser Ala Val
305 310 315
aac ccc att atc tat aac cta ctg tct cgc cgc ttc cag gca gca ttc 1068
Asn Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala Ala Phe
320 325 330 335
cag aat gtg atc tct tct ttc cac aaa cag tgg cac tcc cag cat gac 1116
Gln Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln His Asp
340 345 350
cca cag ttg cca cct gcc cag cgg aac atc ttc ctg aca gaa tgc cac 1164
Pro Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu Cys His
355 360 365
ttt gtg gag ctg acc gaa gat ata ggt ccc caa ttc cta tgt cag tca 1212
Phe Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Leu Cys Gln Ser
370 375 380
tcc gtg cac aac tct cac ctc cca aca gcc ctc tct agt gaa cag atg 1260
Ser Val His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu Gln Met
385 390 395
tca aga aca aac tat caa agc ttc cac ttt aac aaa acc tgaattcttt 1309
Ser Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
400 405 410
cagagctgac tctcctctat gcctcaaaac ttcagagagg aacatcccat aatgtatgcc 1369
ttctcatatg aaattagaga ggtagaatgg ctcttacaac tcatgtaccc attgctagtt 1429
tttttttttt aataaacgtg aaaactgaga gttagatctg gtttcaaaac ccaagactgc 1489
ctgattttta gttatctttc cactatccta actgcctcat gccccttcac tagttcatgc 1549
caagaacgtg actggaaagg catggcacct ataccttgat taatttccat taatggaaat 1609
ggttcgtcct gagtcatcta cgttccgagt caggctgtca ctcctacta 1658
<210>8
<211>412
<212>PRT
<213〉mankind
<400>8
Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys Leu Glu
1 5 10 15
Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu Ala Phe
20 25 30
Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser Val Val
35 40 45
Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu Val Cys
50 55 60
Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn Tyr Tyr
65 70 75 80
Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu Gly Met
85 90 95
Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu Phe Gly
100 105 110
Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val Cys Phe
115 120 125
Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr Val Ala
130 135 140
Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg Arg Ala
145 150 155 160
Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe Ser Leu
165 170 175
Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro Asn Gly
180 185 190
Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro Met Trp
195 200 205
Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr Leu Leu
210 215 220
Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu Arg Leu
225 230 235 240
Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn Ile Gln
245 250 255
Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Phe Val Leu Val Leu
260 265 270
Val Phe Ala Ile Cys Trp Ala Pro Phe His Ile Asp Arg Leu Phe Phe
275 280 285
Ser Phe Val Glu Glu Trp Thr Glu Ser Leu Ala Ala Val Phe Asn Leu
290 295 300
Val His Val Val Ser Gly Val Leu Phe Tyr Leu Ser Ser Ala Val Asn
305 310 315 320
Pro Ile Ile Tyr Asn Leu Leu Ser Arg Arg Phe Gln Ala Ala Phe Gln
325 330 335
Asn Val Ile Ser Ser Phe His Lys Gln Trp His Ser Gln His Asp Pro
340 345 350
Gln Leu Pro Pro Ala Gln Arg Asn Ile Phe Leu Thr Glu Cys His Phe
355 360 365
Val Glu Leu Thr Glu Asp Ile Gly Pro Gln Phe Leu Cys Gln Ser Ser
370 375 380
Val His Asn Ser His Leu Pro Thr Ala Leu Ser Ser Glu Gln Met Ser
385 390 395 400
Arg Thr Asn Tyr Gln Ser Phe His Phe Asn Lys Thr
405 410
<210>9
<211>1594
<212>DNA
<213〉mankind
<220>
<221>CDS
<222>(55)..(942)
<223〉the DNA elongated of IGs4A brachymemma
<400>9
ggctcagctt gaaacagagc ctcgtaccag gggaggctca ggccttggat ttta atg 57
Met
1
tca ggg atg gaa aaa ctt cag aat gct tcc tgg atc tac cag cag aaa 105
Ser Gly Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys
5 10 15
cta gaa gat cca ttc cag aaa cac ctg aac agc acc gag gag tat ctg 153
Leu Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu
20 25 30
gcc ttc ctc tgc gga cct cgg cgc agc cac ttc ttc ctc ccc gtg tct 201
Ala Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser
35 40 45
gtg gtg tat gtg cca att ttt gtg gtg ggg gtc att ggc aat gtc ctg 249
Val Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu
50 55 60 65
gtg tgc ctg gtg att ctg cag cac cag gct atg aag acg ccc acc aac 297
Val Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn
70 75 80
tac tac ctc ttc agc ctg gcg gtc tct gac ctc ctg gtc ctg ctc ctt 345
Tyr Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu
85 90 95
gga atg ccc ctg gag gtc tat gag atg tgg cgc aac tac cct ttc ttg 393
Gly Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu
100 105 110
ttc ggg ccc gtg ggc tgc tac ttc aag acg gcc ctc ttt gag acc gtg 441
Phe Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val
115 120 125
tgc ttc gcc tcc atc ctc agc atc acc acc gtc agc gtg gag cgc tac 489
Cys Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr
130 135 140 145
gtg gcc atc cta cac ccg ttc cgc gcc aaa ctg cag agc acc cgg cgc 537
Val Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg
150 155 160
cgg gcc ctc agg atc ctc ggc atc gtc tgg ggc ttc tcc gtg ctc ttc 585
Arg Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe
165 170 175
tcc ctg ccc aac acc agc atc cat ggc atc aag ttc cac tac ttc ccc 633
Ser Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro
180 185 190
aat ggg tcc ctg gtc cca ggt tcg gcc acc tgt acg gtc atc aag ccc 681
Asn Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro
195 200 205
atg tgg atc tac aat ttc atc atc cag gtc acc tcc ttc cta ttc tac 729
Met Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr ser Phe Leu Phe Tyr
210 215 220 225
ctc ctc ccc atg act gtc atc agt gtc ctc tac tac ctc atg gca ctc 777
Leu Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu
230 235 240
aga cta aag aaa gac aaa tct ctt gag gca gat gaa ggg aat gca aat 825
Arg Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn
245 250 255
att caa aga ccc tgc aga aaa tca gtc aac aag atg ctg tct ttg tgg 873
Ile Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Ser Leu Trp
260 265 270
agg agt gga gtg aat ccc tgg ctg ctg tgt tca acc tcg tcc atg tgg 921
Arg Ser Gly Val Asn Pro Trp Leu Leu Cys Ser Thr Ser Ser Met Trp
275 280 285
tgt cag gtg tct tct tct acc tgagctcagc tgtcaacccc attatctata 972
Cys Gln Val Ser Ser Ser Thr
290 295
acctactgtc tcgccgcttc caggcagcat tccagaatgt gatctcttct ttccacaaac 1032
agtggcactc ccagcatgac ccacagttgc cacctgccca gcggaacatc ttcctgacag 1092
aatgccactt tgtggagctg accgaagata taggtcccca attcccatgt cagtcatcca 1152
tgcacaactc tcacctccca acagccctct ctagtgaaca gatgtcaaga acaaactatc 1212
aaagcttcca ctttaacaaa acctgaattc tttcagagct gactctcctc tatgcctcaa 1272
aacttcagag aggaacatcc cataatgtat gccttctcat atgatattag agaggtagaa 1332
tggctcttac aactcatgta cccattgcta gttttttttt tttaataaac gtgaaaactg 1392
agagttagat ctggtttcaa aacccaagac tgcctgattt ttagttatct ttccactatc 1452
ctaactgcct catgcccctt cactagttca tgccaagaac gtgactggaa aggcatggca 1512
cctatacctt gattaatttc cattaatgga aatggttcgt cctgagtcat ctacgttccg 1572
agtcaggctg tcactcctac ta 1594
<210>10
<211>296
<212>PRT
<213〉mankind
<400>10
Met Ser Gly Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln
1 5 10 15
Lys Leu Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr
20 25 30
Leu Ala Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val
35 40 45
Ser Val Val TyT Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val
50 55 60
Leu Val Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr
65 70 75 80
Asn Tyr Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu
85 90 95
Leu Gly Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe
100 105 110
Leu Phe Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr
115 120 125
Val Cys Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg
130 135 140
Tyr Val Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg
145 150 155 160
Arg Arg Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu
165 170 175
Phe Ser Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe
180 185 190
Pro Asn Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys
195 200 205
Pro Met Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe
210 215 220
Tyr Leu Leu Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala
225 230 235 240
Leu Arg Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala
245 250 255
Asn Ile Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Ser Leu
260 265 270
Trp Arg Ser Gly Val Asn Pro Trp Leu Leu Cys Ser Thr Ser Ser Met
275 280 285
Trp Cys Gln Val Ser Ser Ser Thr
290 295
<210>11
<211>1594
<212>DNA
<213〉mankind
<220>
<221>CDS
<222>(64)..(942)
<223〉the short type of the DNA of IGS4A brachymemma
<400>11
ggctcagctt gaaacagagc ctcgtaccag gggaggctca ggccttggat tttaatgtca 60
ggg atg gaa aaa ctt cag aat gct tcc tgg atc tac cag cag aaa cta 108
Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys Leu
1 5 10 15
gaa gat cca ttc cag aaa cac ctg aac agc acc gag gag tat ctg gcc 156
Glu Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu Ala
20 25 30
ttc ctc tgc gga cct cgg cgc agc cac ttc ttc ctc ccc gtg tct gtg 204
Phe Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser Val
35 40 45
gtg tat gtg cca att ttt gtg gtg ggg gtc att ggc aat gtc ctg gtg 252
Val Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu Val
50 55 60
tgc ctg gtg att ctg cag cac cag gct atg aag acg ccc acc aac tac 300
Cys Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn Tyr
65 70 75
tac ctc ttc agc ctg gcg gtc tct gac ctc ctg gtc ctg ctc ctt gga 348
Tyr Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu Gly
80 85 90 95
atg ccc ctg gag gtc tat gag atg tgg cgc aac tac cct ttc ttg ttc 396
Met Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu Phe
100 105 110
ggg ccc gtg ggc tgc tac ttc aag acg gcc ctc ttt gag acc gtg tgc 444
Gly Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val Cys
115 120 125
ttc gcc tcc atc ctc agc atc acc acc gtc agc gtg gag cgc tac gtg 492
Phe Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr Val
130 135 140
gcc atc cta cac ccg ttc cgc gcc aaa ctg cag agc acc cgg cgc cgg 540
Ala Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg Arg
145 150 155
gcc ctc agg atc ctc ggc atc gtc tgg ggc ttc tcc gtg ctc ttc tcc 588
Ala Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe Ser
160 165 170 175
ctg ccc aac acc agc atc cat ggc atc aag ttc cac tac ttc ccc aat 636
Leu Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro Asn
180 185 190
ggg tcc ctg gtc cca ggt tcg gcc acc tgt acg gtc atc aag ccc atg 684
Gly Ser Leu Val Pro Gly Ser Ala Thr Cys Thr Val Ile Lys Pro Met
195 200 205
tgg atc tac aat ttc atc atc cag gtc acc tcc ttc cta ttc tac ctc 732
Trp Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr Leu
210 215 220
ctc ccc atg act gtc atc agt gtc ctc tac tac ctc atg gca ctc aga 780
Leu Pro Met Thr Val Ile Ser Val Leu tyr Tyr Leu Met Ala Leu Arg
225 230 235
cta aag aaa gac aaa tct ctt gag gca gat gaa ggg aat gca aat att 828
Leu Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn Ile
240 245 250 255
caa aga ccc tgc aga aaa tca gtc aac aag atg ctg tct ttg tgg agg 876
Gln Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Ser Leu Trp Arg
260 265 270
agt gga gtg aat ccc tgg ctg ctg tgt tca acc tcg tcc atg tgg tgt 924
Ser Gly Val Asn Pro Trp Leu Leu Cys Ser Thr Ser Ser Met Trp Cys
275 280 285
cag gtg tct tct tct acc tgagctcagc tgtcaacccc attatctata 972
Gln Val Ser Ser Ser Thr
290
acctactgtc tcgccgcttc caggcagcat tccagaatgt gatctcttct ttccacaaac 1032
agtggcactc ccagcatgac ccacagttgc cacctgccca gcggaacatc ttcctgacag 1092
aatgccactt tgtggagctg accgaagata taggtcccca attcccatgt cagtcatcca 1152
tgcacaactc tcacctccca acagccctct ctagtgaaca gatgtcaaga acaaactatc 1212
aaagcttcca ctttaacaaa acctgaattc tttcagagct gactctcctc tatgcctcaa 1272
aacttcagag aggaacatcc cataatgtat gccttctcat atgatattag agaggtagaa 1332
tggctcttac aactcatgta cccattgcta gttttttttt tttaataaac gtgaaaactg 1392
agagttagat ctggtttcaa aacccaagac tgcctgattt ttagttatct ttccactatc 1452
ctaactgcct catgcccctt cactagttca tgccaagaac gtgactggaa aggcatggca 1512
cctatacctt gattaatttc cattaatgga aatggttcgt cctgagtcat ctacgttccg 1572
agtcaggctg tcactcctac ta 1594
<210>12
<211>293
<212>PRT
<213〉mankind
<400>12
Met Glu Lys Leu Gln Asn Ala Ser Trp Ile Tyr Gln Gln Lys Leu Glu
1 5 10 15
Asp Pro Phe Gln Lys His Leu Asn Ser Thr Glu Glu Tyr Leu Ala Phe
20 25 30
Leu Cys Gly Pro Arg Arg Ser His Phe Phe Leu Pro Val Ser Val Val
35 40 45
Tyr Val Pro Ile Phe Val Val Gly Val Ile Gly Asn Val Leu Val Cys
50 55 60
Leu Val Ile Leu Gln His Gln Ala Met Lys Thr Pro Thr Asn Tyr Tyr
65 70 75 80
Leu Phe Ser Leu Ala Val Ser Asp Leu Leu Val Leu Leu Leu Gly Met
85 90 95
Pro Leu Glu Val Tyr Glu Met Trp Arg Asn Tyr Pro Phe Leu Phe Gly
100 105 110
Pro Val Gly Cys Tyr Phe Lys Thr Ala Leu Phe Glu Thr Val Cys Phe
115 120 125
Ala Ser Ile Leu Ser Ile Thr Thr Val Ser Val Glu Arg Tyr Val Ala
130 135 140
Ile Leu His Pro Phe Arg Ala Lys Leu Gln Ser Thr Arg Arg Arg Ala
145 150 155 160
Leu Arg Ile Leu Gly Ile Val Trp Gly Phe Ser Val Leu Phe Ser Leu
165 170 175
Pro Asn Thr Ser Ile His Gly Ile Lys Phe His Tyr Phe Pro Asn Gly
180 185 190
Ser Leu Val Pro Gly Ser Ala Thr Cys Tnt Val Ile Lys Pro Met Trp
195 200 205
Ile Tyr Asn Phe Ile Ile Gln Val Thr Ser Phe Leu Phe Tyr Leu Leu
210 215 220
Pro Met Thr Val Ile Ser Val Leu Tyr Tyr Leu Met Ala Leu Arg Leu
225 230 235 240
Lys Lys Asp Lys Ser Leu Glu Ala Asp Glu Gly Asn Ala Asn Ile Gln
245 250 255
Arg Pro Cys Arg Lys Ser Val Asn Lys Met Leu Ser Leu Trp Arg Ser
260 265 270
Gly Val Asn Pro Trp Leu Leu Cys Ser Thr Ser Ser Met Trp Cys Gln
275 280 285
Val Ser Ser Ser Thr
290
<210>13
<211>26
<212>DNA
<213〉artificial sequence
<220>
<223〉description of artificial sequence: degenerated primer
<220>
<221〉variation
<222>(21)
<223〉A, C, G or T
<220>
<221〉variation
<222>(24)
<223〉A, C, G or T
<400>13
ctcatcttcg cggtgggcrc ngyngg 26
<210>14
<211>31
<212>DNA
<213〉artificial sequence
<220>
<223〉description of artificial sequence: degenerated primer
<220>
<221〉variation
<222>(22)
<223〉C or inosine
<220>
<221〉variation
<222>(25)
<223〉A, C, G or T
<220>
<221〉variation
<222>(28)
<223〉A, C, G or T
<400>14
ggccaggcag cgctccgcgc tnarncyngc d 31
<210>15
<211>22
<212>DNA
<213〉artificial sequence
<220>
<223〉description of artificial sequence: degenerated primer
<400>15
gaartartag ccrcgrcagc cw 22
<210>16
<211>27
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>16
ccatcctaat acgactcact atagggc 27
<210>17
<211>23
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>17
<3>actcactata gggctcgagc ggc 23
<210>18
<211>27
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>18
ggatcccaaa taagaaaggg tagttgc 27
<210>19
<211>29
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>19
aaagggtagt tgcgccacat ctcatagac 29
<210>20
<211>29
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>20
aggtctatga gatgtggcgc aactaccct 29
<210>21
<211>30
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>21
atgtggcgca actacccttt cttatttggg 30
<210>22
<211>26
<212>DNA
<213〉artificial sequence
<220>
<223〉description of artificial sequence: degenerated primer
<400>22
cggaagttgg cggacacgrv rttrta 26
<210>23
<211>27
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>23
gctcagcttg aaacagagcc tcgtacc 27
<210>24
<211>27
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>24
ccatgtggat ctacaatttc atcatcc 27
<210>25
<211>29
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>25
aagacaaatc tcttgaggca gatgaaggg 29
<210>26
<211>30
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>26
gatgctgttt gtcttggtct tagtgtttgc 30
<210>27
<211>29
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>27
ggatgatgaa attgtagatc cacatgggc 29
<210>28
<211>25
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>28
tgtggagaag tctctcaaag tgtgg 25
<210>29
<211>29
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>29
tagtaggagt gacagcctga ctcggaacg 29
<210>30
<211>30
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>30
aacgtagatg actcaggacg aaccatttcc 30
<210>31
<211>22
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>31
tcgtaccagg ggaggctcag gc 22
<210>32
<211>23
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>32
cctcttcagc ctggcggtct ctg 23
<210>33
<211>22
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<400>33
ggaggcgaag cacacggtct ca 22
<210>34
<211>34
<212>DNA
<213〉artificial sequence
<220>
<223〉artificial sequence description: primer
<220>
<221>misc_binding
<222>(1)
<223〉with 6-Fluoresceincarboxylic acid mark
<220>
<221>misc_binding
<222>(34)
<223〉use N, N, N ', N '-tetramethyl--6-carboxyl rhodamine mark
<400>34
agatgtggcg caactaccct ttcttgttcg ggcc 34

Claims (40)

1. the separation polynucleotide that comprise the nucleotide sequence that is selected from down group:
(a) nucleotide sequence of the IGS4 polypeptide of coding SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ IDNO:8;
(b) coding is numbered the nucleotide sequence that the contained DNA of CBS102222 inserts the polypeptide of fragment coding by fungi strain preservation center preservation thing numbering CBS102221 or the preservation thing of Dutch Baarn, particularly comprises the nucleotide sequence of SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or SEQ IDNO:7;
The nucleotide sequence of (preferably at least 90%) the sequence identity that (c) on its total length, with nucleotide sequence (a) or (b) has at least 80%;
(d) with nucleotide sequence (a) or (b) or (c) complementary nucleotide sequence.
2. the polynucleotide of claim 1, wherein said polynucleotide comprise the nucleotide sequence of the IGS4 polypeptide of coding SEQ ID NO:8 contained among the nucleotide sequence of IGS4 polypeptide of coding SEQ ID NO:6 contained in the nucleotide sequence, SEQ ID NO:5 of the IGS4 polypeptide of coding SEQ ID NO:4 contained in the nucleotide sequence, SEQ ID NO:3 of the IGS4 polypeptide of coding SEQ ID NO:2 contained among the SEQ ID NO:1 or the SEQ ID NO:7.
3. the polynucleotide of claim 1, wherein said polynucleotide are included on its total length the nucleotide sequence with SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or SEQ ID NO:7, perhaps insert the same nucleotide sequence of fragments sequence at least 80% with the fungi strain preservation center preservation thing numbering CBS102221 of Dutch Baarn or the contained DNA of preservation thing numbering CBS102222.
4. the polynucleotide of claim 3, it is the polynucleotide of SEQ ID NO:1, SEQ ID NO:3, SEQ ID NO:5 or SEQ ID NO:7, or the fungi strain preservation center preservation thing of Dutch Baarn is numbered CBS102221 or the contained DNA of preservation thing numbering CBS102222 inserts segmental polynucleotide.
5. the polynucleotide of claim 1-4, it is DNA or RNA.
6. the separating nucleotide sequence of coding IGS4 neuromedin receptor protein, preferred mammal neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25.
7. the separating nucleotide sequence of coding IGS4 neuromedin receptor protein in the claim 6, described protein is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland and/or the tracheae and expresses.
8. coding IGS4 neuromedin receptor protein, the separating nucleotide sequence of preferred mammal neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23, and/or Neuromedin U-25, described protein is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, the tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland, and/or express in the tracheae, and described nucleotide sequence is selected from the nucleotide sequence that defines among the claim 1-5.
9. the DNA or the RNA molecule that comprise expression system, wherein when described expression system is present in the compatible host cell, can generate the polypeptide that comprises with SEQ ID NO:2, SEQ ID NO:4, SEQID NO:6 or SEQ ID NO:8, perhaps have the IGS4 polypeptide of the aminoacid sequence of at least 80% identity with the polypeptide of numbering the contained DNA insertion of CBS102222 fragment coding by fungi strain preservation center preservation thing numbering CBS102221 or the preservation thing of Dutch Baarn.
10. the DNA isolation or the RNA molecule that comprise expression system, wherein said expression system can generate and comprise the neuromedin receptor protein, the IGS4 polypeptide of preferred mammal neuromedin receptor protein aminoacid sequence, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23, and/or Neuromedin U-25, and be illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, the tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland, and/or express in the tracheae.
11. comprise the host cell of the expression system of claim 9 or 10.
12. the host cell of claim 11, it is a yeast cell.
13. the host cell of claim 11, it is a zooblast.
14. cell-derived IGS4 receptor membrane preparation by claim 11-13.
15. be used to generate the method for IGS4 polypeptide, be included in the host who cultivates claim 11-13 under the condition that is enough to generate described polypeptide, and reclaim this polypeptide by culture.
16. be used to produce the method for the cell that generates the IGS4 polypeptide, comprise that the expression system with claim 9 or 10 transforms or transfection host cell, make host cell under suitable culture condition, generate the IGS4 polypeptide.
17. be included on its total length the aminoacid sequence with SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8, the IGS4 polypeptide of the aminoacid sequence that the polypeptide that perhaps inserts fragment coding with fungi strain preservation center preservation thing numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 by Dutch Baarn at least 80% is same.
18. the polypeptide of claim 17, it comprises the aminoacid sequence of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8, perhaps by the fungi strain preservation center preservation thing numbering CBS102221 of Dutch Baarn or the aminoacid sequence of the contained DNA insertion of preservation thing numbering CBS102222 fragment coding.
19. comprise the separation IGS4 polypeptide of the aminoacid sequence of neuromedin receptor protein, preferred mammal neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25.
20. the separation IGS4 polypeptide of claim 19, it comprises the aminoacid sequence of neuromedin receptor protein, and described protein is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland and/or the tracheae and expresses.
21. comprise the neuromedin receptor protein, the separation IGS4 polypeptide of the aminoacid sequence of preferred mammal neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23, and/or Neuromedin U-25, described protein is illustrated in brain, skeletal muscle, cerebellum, testis, corpus callosum, spinal cord, black substance, medullary substance, thalamus, caudatum, pons, volt nuclear, the tire brain, stomach, the heart, Tiroidina, lung, thymus gland, prostate gland, and/or express in the tracheae, and described aminoacid sequence is selected from the aminoacid sequence that defines among the claim 17-18.
22. the IGS4 polypeptide of claim 17-21 is had the antibody of immunologic opsonin.
Needs strengthen IGS4 polypeptide active of claim 17-21 or the method for the object of expressing 23. be used for the treatment of, and comprising:
(a) to the agonist of the described acceptor of this object administering therapeutic significant quantity; And/or
(b) provide the IGS4 polypeptide that is included on its total length with coding SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8 to this object, perhaps the nucleotide sequence of the nucleotide sequence that inserts the polypeptide of fragment coding by fungi strain preservation center preservation thing numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 of Dutch Baarn with at least 80% identity; Thereby perhaps with the complementary polynucleotide that separate that cause nucleotide sequence that described receptor active generates in vivo of certain form and one of described nucleotide sequence; And/or
(c) this object is provided comprising the separation polynucleotide of nucleotide sequence that coding comprises IGS4 neuromedin receptor protein, preferred mammal IGS4 neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25.
24. be used for the treatment of the method that needs suppress the object of the IGS4 polypeptide active of claim 17-21 or expression, comprise:
(a) to the antagonist of the described acceptor of this object administering therapeutic significant quantity; And/or
(b) this object is used the nucleic acid molecule that the nucleotide sequence that suppresses the described acceptor of coding is expressed; And/or
(c) to this object administering therapeutic significant quantity and polypeptide described receptor competition part.
25. be used in the diagnosis object body comprising with the IGS4 polypeptide expression of claim 17-21 or active diseases associated or to the method for the susceptibility of this disease:
(a) whether there is sudden change in the nucleotide sequence of the described IGS4 polypeptide of coding in the described object genome of mensuration; And/or
(b) whether or its expression amount the existence of analyzing described IGS4 expression of polypeptides in by described object deutero-sample.
26. be used to identify the method for agonist of the IGS4 polypeptide of claim 17-21, comprise:
(a) make the cells contacting testing compound that generates the IGS4 polypeptide; And
(b) whether the mensuration compound of surveying causes the signal by the activation generation of IGS4 polypeptide.
27. the agonist of identifying by the method for claim 26.
28. be used to identify the method for the agonist of IGS4 neuromedin receptor protein, preferred mammal IGS4 neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25 comprise:
(a) make the cells contacting testing compound that generates IGS4 neuromedin receptor protein; And
(b) whether the mensuration compound of surveying causes the signal by the activation generation of IGS4 neuromedin receptor protein.
Be used to identify the method for the agonist of IGS4 neuromedin receptor protein 29. claim 28 is described, wherein said agonist comprises that to neural system central nervous system (CNS) and peripheral nervous system (PNS), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder are effective, and/or also effective to tuberculosis, amynologic disease and urogenital system disorder.
30. the agonist of identifying by the method for claim 28 or 29, preferably neural system is comprised that central nervous system (CNS) and peripheral nervous system (PNS), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder are effective, and/or to tuberculosis, amynologic disease and urogenital system disorder also effective agonist.
31. be used to identify the method for antagonist of the IGS4 polypeptide of claim 17-21, comprise:
(a) make the cells contacting agonist that generates the IGS4 polypeptide; And
Whether (b) be determined at the signal that is produced by described agonist when having candidate compound reduces.
32. the antagonist of identifying by the method for claim 31.
33. be used to identify the method for the antagonist of IGS4 neuromedin receptor protein, preferred mammal IGS4 neuromedin receptor protein, described protein is showed with high-affinity in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25 comprise:
(a) make the cells contacting agonist that generates IGS4 neuromedin receptor protein; And
Whether (b) be determined at the signal that is produced by described agonist when having candidate compound reduces.
34. be used to identify the method for the antagonist of IGS4 neuromedin receptor protein in the claim 33, wherein said antagonist comprises that to neural system central nervous system (CNS) and peripheral nervous system (PNS), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder are effective, and/or also effective to tuberculosis, amynologic disease and urogenital system disorder.
35. the antagonist of identifying by the method for claim 33 or 34, preferably neural system is comprised that central nervous system (CNS) and peripheral nervous system (PNS), gastro-intestinal system, cardiovascular systems, skeletal muscle and/or thyroid disorder are effective, and/or to tuberculosis, amynologic disease and urogenital system disorder also effective antagonist.
36. the recombinant host cell that is produced by the method for claim 16 or its are expressed the film of IGS4 polypeptide.
37. produce the non-human animal's of genetic modification method, comprising:
(a) encoding part of nucleic acid molecule is connected with the regulating and controlling sequence that can drive high-level genetic expression or can express in described animal in the cell type that this gene is not expressed usually, wherein said encoding part has SEQ ID NO:2 by coding basically, SEQ IDNO:4, SEQ ID NO:6, or the aminoacid sequence of SEQ ID NO:8 or insert the nucleic acid sequences to proteins of aminoacid sequence of fragment coding by the fungi strain preservation center preservation thing of Dutch Baarn numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 or the biologically-active moiety of one of described sequence is formed; Perhaps
(b) encoding part of separation and transformation nucleic acid molecule, described encoding part mainly has SEQ ID NO:2 by coding, SEQ ID NO:4, SEQ ID NO:6, or the aminoacid sequence of SEQ ID NO:8 or insert the nucleic acid sequences to proteins of aminoacid sequence of fragment coding by the fungi strain preservation center preservation thing of Dutch Baarn numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222 or the biologically-active moiety of one of described sequence is formed, and described sequence imported the genome of described animal again, make coding have SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6, or the aminoacid sequence of SEQ ID NO:8 or insert the proteinic endogenous allelotrope inactivation wholly or in part of the aminoacid sequence of fragment coding by the fungi strain preservation center preservation thing of Dutch Baarn numbering CBS102221 or the contained DNA of preservation thing numbering CBS102222.
38. whether be the method for the potential part of IGS4 acceptor, comprising if being used to measure certain material:
(a) exist and do not exist in the situation of described material, make the cell of the acceptor of expressing one of claim 17-21 or one of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8, perhaps make the Neuromedin U of the receptor membrane preparation contact of one of described acceptor of comprising one of claim 17-21 or one of SEQ ID NO:2, SEQ ID NO:4, SEQ ID NO:6 or SEQ ID NO:8 through mark; And
(b) measure combining of Neuromedin U and described IGS4.
39. each polypeptide of claim 17-21, it is characterized by described polypeptide can be in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25, and show that avidity is about at least log EC 50=-6.
40. each polypeptide of claim 17-21, it is characterized by described polypeptide can be in conjunction with Neuromedin U, preferred Neuromedin U-8, Neuromedin U-23 and/or Neuromedin U-25, and show that avidity is about at least log EC 50=-9.
CN 200510092639 1999-09-24 2000-09-25 Human g-protein coupled receptor Pending CN1824777A (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
NL1013140 1999-09-24
NL1013140 1999-09-24
EP99203140.1 1999-09-24
EP00202683.9 2000-07-28
US60/222,047 2000-07-31

Related Parent Applications (1)

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CN1824777A true CN1824777A (en) 2006-08-30

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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113429482A (en) * 2014-12-05 2021-09-24 纪念斯隆-凯特琳癌症中心 Antibodies targeting G-protein coupled receptors and methods of use

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113429482A (en) * 2014-12-05 2021-09-24 纪念斯隆-凯特琳癌症中心 Antibodies targeting G-protein coupled receptors and methods of use

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