CN1293203A - Polypeptide-human zinc finger protein 59 and polynucleotide for coding this polypeptide - Google Patents
Polypeptide-human zinc finger protein 59 and polynucleotide for coding this polypeptide Download PDFInfo
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Abstract
A new polypeptide-human zinc finger protein 59, the polynucleotide for coding it, the process for preparing it by recombination, its application in treating several diseases, the antagon resisting it and medical action, and coding the new applications of said polynucleotide are disclosed.
Description
The invention belongs to biological technical field, specifically, the invention describes a kind of new polypeptide--Novel Human Zinc Finger Protein 59, and the polynucleotide sequence of this polypeptide of encoding.The invention still further relates to the preparation method and the application of these polynucleotide and polypeptide.
Zinc finger protein is that a kind of DNA is conjugated protein, finds in the proteic aminoacid sequence of 5S rRNA gene transcription factor TF III A of Africa xenopus rna plymerase iii mediation.After this find that zinc finger protein all has expression in different biological various tissues, these tissues comprise hematopoietic cell, brain, neural system, face tissue, the various tissues relevant with the secretion absorption and the tissue relevant with immortal cell line with tumour etc.Zinc fingers mainly contains two classes:
1, the Zn atom combines (C with 2 Cys, 2 His residues
2/ H
2)
Zinc fingers as typical TFIIIA is Cys-Cys ... His-His arranges.Refer to have in the unit one section conservative relatively sequence at this class zinc: (Tyr, Phe)-X-Cys-X. (2-4)-Cys-X.3-Phe-X.5-Leu-X.2-His-X (3-5)-His.
2, the Zn atom combines (C with 4 Cys residues
2/ C
2)
Zn and Cys-Cys ... Cys-Cys combination, general characteristic are that one section aminoacid sequence between interior part does not resemble and contains hydrophobic amino acids such as conservative tyrosine, phenylalanine, leucine the TFIIIA, but contain acidic amino acid.Acidic amino acid and basic aminoacids form salt bridge probably, rather than form a kind of hydrophobic region.
In addition, also have a class zinc fingers to find that in the zymic gene activation factor 2 Zn atoms closely are close together and cooperate with 6 Cys, form the structure of " zinc bunch " core.
In zinc finger protein, the effect of Zn is protein molecule to be formed refer to that the skeleton of type conformation combines with DNA.
Zinc fingers all has discovery in many and " protein-nucleic acid " and " protein-protein " interaction proteins associated.Zinc finger protein can combine with double-stranded DNA (dsDNA) or single stranded RNA, and function is general relevant with the regulation and control of genetic expression, has the effect [Miller, 1985 ,] of transcription factor and signal transmission factor.Existing studies show that, C
2H
2The Zinc finger domain of type plays a crucial role in developmental regulation.For example, in DrosopilaKruppel (Rosenberg, 1986) and hunchback (Tautz, 1987) zinc finger protein, this structural domain forms relevant with embryo's pattern; In mouse Krox-20 zinc finger protein, this structural domain forms with the back brain connection pattern and cell proliferation control relevant (Chavrier, 1988; Wilkinson, 1989); It is relevant that some zinc finger protein and tumour form, and as Gli-3 (vortkamp, 1991) in the Greig syndromes, WT1 is (Haber, 1990) in Wilm ' s tumour.
The present invention is a kind of new zinc finger protein of finding in people's tire brain, called after Novel Human Zinc Finger Protein 59 albumen.It comprises 6 C
2/ H
2Structure.Also there are Kruppel associated cartridge (Kruppel-associated box, KRAB) structural domain at this proteic N end.The KRAB structural domain is very conservative, constitutes two parts of A, B by about 75 amino acid, is rich in charged amino acid, is folded into an amphipathic α spiral respectively.The effect of KRAB structure is to suppress Transcription.[Judith?F.Margolin,Proc.Natl.Acad.Sci.USA,Vol.91,pp.4509-4513]
The polynucleotide of encoding zinc finger protein, and coded zinc finger protein be found to be the differentiation of research cell under normal and pathological conditions, the physiological and biochemical procedure of propagation provides a kind of method, also comprises that with the disease that the disorder of cytodifferentiation propagation causes cancer provides a kind of new way for diagnosis, treatment.
An object of the present invention is to provide isolating new polypeptide--Novel Human Zinc Finger Protein 59 with and fragment, analogue and derivative.
Another object of the present invention provides the polynucleotide of this polypeptide of coding.
Another object of the present invention provides the recombinant vectors of the polynucleotide that contain the Novel Human Zinc Finger Protein 59 of encoding.
Another object of the present invention provides the genetically engineered host cell of the polynucleotide that contain the Novel Human Zinc Finger Protein 59 of encoding.
Another object of the present invention provides the method for producing Novel Human Zinc Finger Protein 59.
Another object of the present invention provides at polypeptide of the present invention--the antibody of Novel Human Zinc Finger Protein 59.
Another object of the present invention has provided at polypeptide of the present invention--the simulated compound of Novel Human Zinc Finger Protein 59, antagonist, agonist, inhibitor.
Another object of the present invention provides the method for the unusual relevant disease of diagnoses and treatment and Novel Human Zinc Finger Protein 59.
In a first aspect of the present invention, novel isolated Novel Human Zinc Finger Protein 59 is provided, this polypeptide is the people source, and it comprises: have the polypeptide of SEQ ID NO:2 aminoacid sequence or its conservative property variation polypeptide or its active fragments or its reactive derivative, analogue.Preferably, this polypeptide is the polypeptide with SEQ ID NO:2 aminoacid sequence.
In a second aspect of the present invention, the polynucleotide of isolating these polypeptide of coding are provided, these polynucleotide comprise a nucleotide sequence, and this nucleotide sequence is shown at least 70% homogeny with a kind of nucleotides sequence that is selected from down group: (a) polynucleotide of the above-mentioned Novel Human Zinc Finger Protein 59 of coding; (b) with polynucleotide (a) complementary polynucleotide.Preferably, this polynucleotide encoding has the polypeptide of aminoacid sequence shown in the SEQ ID NO:2.More preferably, the sequence of these polynucleotide is be selected from down group a kind of: the sequence that (a) has 191--1789 position among the SEQ ID NO:1; (b) has the sequence of 1--2021 position among the SEQ ID NO:1.
In a third aspect of the present invention, the carrier that contains above-mentioned polynucleotide is provided, and has been transformed or host cell of transduceing or the host cell that is directly transformed or transduce by above-mentioned polynucleotide by this carrier.
Others of the present invention are because disclosing of the technology of this paper is conspicuous to those skilled in the art.
As used herein, " isolating " are meant that material separates (if natural substance, primal environment promptly is a natural surroundings) from its primal environment.Do not have separation and purification as polynucleotide under the native state in the active somatic cell and polypeptide, but same polynucleotide or polypeptide as from native state with in other materials that exist separately, then for separation and purification.
As used herein, " isolating Novel Human Zinc Finger Protein 59 " is meant that Novel Human Zinc Finger Protein 59 is substantially free of natural relative other albumen, lipid, carbohydrate or other material.Those skilled in the art can use the purified technology of protein purifying Novel Human Zinc Finger Protein 59 of standard.Basically pure polypeptide can produce single master tape on non-reduced polyacrylamide gel.The purity of Novel Human Zinc Finger Protein 59 polypeptide can be used amino acid sequence analysis.
The invention provides a kind of new polypeptide--Novel Human Zinc Finger Protein 59, it is made up of the aminoacid sequence shown in the SEQ ID NO:2 basically.Polypeptide of the present invention can be recombinant polypeptide, natural polypeptides, synthetic polypeptide, preferred recombinant polypeptide.Polypeptide of the present invention can be the product of natural purifying, or the product of chemosynthesis, or uses recombinant technology to produce from protokaryon or eucaryon host (for example, bacterium, yeast, higher plant, insect and mammalian cell).The host used according to the recombinant production scheme, polypeptide of the present invention can be glycosylated, maybe can be nonglycosylated.Polypeptide of the present invention also can comprise or not comprise initial methionine residues.
The present invention also comprises fragment, derivative and the analogue of Novel Human Zinc Finger Protein 59.As used herein, term " fragment ", " derivative " and " analogue " are meant biological function or the active polypeptide that keeps Novel Human Zinc Finger Protein of the present invention 59 identical basically.The fragment of polypeptide of the present invention, derivative or analogue can be: (I) a kind of like this, wherein one or more amino-acid residues are replaced by conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the amino acid that replaces can be also can not encoded by genetic codon; Perhaps (II) is a kind of like this, and certain group on wherein one or more amino-acid residues is replaced by other group and comprises substituting group; Perhaps (III) is a kind of like this, and wherein mature polypeptide and another kind of compound (such as the compound that prolongs the polypeptide transformation period, for example polyoxyethylene glycol) merge; Perhaps (IV) is a kind of like this, wherein additional aminoacid sequence is integrated into mature polypeptide and the peptide sequence that forms (as leader sequence or secretion sequence or be used for the sequence or the proteinogen sequence of this polypeptide of purifying) by the elaboration of this paper, such fragment, derivative and analogue are considered within those skilled in the art's ken.
The invention provides isolating nucleic acid (polynucleotide), substantially the polynucleotide that have a polypeptide of SEQ ID NO:2 aminoacid sequence by coding are formed.Polynucleotide sequence of the present invention comprises the nucleotide sequence of SEQ ID NO:1.Polynucleotide of the present invention are to find from the cDNA library of people's fetal brain tissue.The polynucleotide sequence total length that it comprises is 2021 bases, its open reading frame 532 amino acid of having encoded.Relatively find according to amino acid sequence homologous, this polypeptide and Novel Human Zinc Finger Protein 84 have 47% homology, and this polypeptide has one section conservative base of Novel Human Zinc Finger Protein gene family, and deducibility goes out this new Novel Human Zinc Finger Protein 59 and has the similar 26S Proteasome Structure and Function of Novel Human Zinc Finger Protein gene family.
Polynucleotide of the present invention can be dna form or rna form.Dna form comprises the DNA of cDNA, genomic dna or synthetic.DNA can be strand or double-stranded.DNA can be coding strand or noncoding strand.The coding region sequence of encoding mature polypeptide can be identical with the coding region sequence shown in the SEQ ID NO:1 or the varient of degeneracy.As used herein, " varient of degeneracy " are meant that in the present invention coding has protein or the polypeptide of SEQ ID NO:2, but with the differentiated nucleotide sequence of coding region sequence shown in the SEQ ID NO:1.
The polynucleotide of the mature polypeptide of coding SEQ ID NO:2 comprise: the encoding sequence that has only mature polypeptide; The encoding sequence of mature polypeptide and various additional code sequence; Encoding sequence of mature polypeptide (with optional additional code sequence) and non-coding sequence.
Term " polynucleotide of coded polypeptide " is meant polynucleotide that comprise this polypeptide of encoding and the polynucleotide that comprise additional code and/or non-coding sequence.
The invention still further relates to the varient of foregoing description polynucleotide, its coding has the polypeptide of identical aminoacid sequence or segment, analogue and the derivative of polypeptide with the present invention.The varient of these polynucleotide can be the allelic variant of natural generation or the varient that non-natural takes place.These nucleotide diversity bodies comprise and replace varient, deletion mutation body and insert varient.As known in the art, allelic variant is the replacement form of polynucleotide, and it may be replacement, disappearance or the insertion of one or more Nucleotide, but can be from not changing the function of its encoded polypeptides in fact.
The invention still further relates to and the polynucleotide (have at least 50% between two sequences, preferably have 70% homogeny) of sequence hybridization described above.The present invention be more particularly directed under stringent condition and the interfertile polynucleotide of polynucleotide of the present invention.In the present invention, " stringent condition " is meant: (1) than hybridization under low ionic strength and the comparatively high temps and wash-out, as 0.2 * SSC, and 0.1%SDS, 60 ℃; Or (2) hybridization the time adds and to use denaturing agent, as 50% (v/v) methane amide, 0.1% calf serum/0.1%Ficoll, 42 ℃ etc.; Or (3) only at the homogeny between the two sequences at least more than 95%, be more preferably 97% and just hybridize when above.And the polypeptide of interfertile polynucleotide encoding has identical biological function and activity with the mature polypeptide shown in the SEQ ID NO:2.
The invention still further relates to nucleic acid fragment with sequence hybridization described above.As used herein, the length of " nucleic acid fragment " contain 10 Nucleotide at least, better are 20-30 Nucleotide at least, are more preferably 50-60 Nucleotide at least, preferably more than at least 100 Nucleotide.Nucleic acid fragment also can be used for the amplification technique (as PCR) of nucleic acid to determine and/or to separate the polynucleotide of coding Novel Human Zinc Finger Protein 59.
Polypeptide among the present invention and polynucleotide preferably provide with isolating form, more preferably are purified to homogeneous.
The special polynucleotide sequence of coding Novel Human Zinc Finger Protein 59 of the present invention can obtain with several different methods.For example, separate polynucleotide with hybridization technique well known in the art.These technology including, but not limited to: 1) with probe and genome or the hybridization of cDNA library to detect homologous polynucleotide sequence and 2) antibody screening of expression library to be to detect the polynucleotide passage of the clone with common structure feature.
Sequence dna fragment of the present invention also can obtain with following method: 1) separate double chain DNA sequence from genomic dna; 2) the chemical synthesising DNA sequence is to obtain the double-stranded DNA of described polypeptide.
In the above-mentioned method of mentioning, isolation of genomic DNA is least commonly used.The direct chemical of dna sequence dna is synthetic to be the method for often selecting for use.The more frequent method of selecting for use is the separation of cDNA sequence.The standard method that separates interested cDNA is from the donorcells separating mRNA of this gene of high expression level and carries out reverse transcription, forms plasmid or phage cDNA library.Extract the existing multiple proven technique of method of mRNA, test kit also can obtain (Qiagene) from commercial channels.And the construction cDNA library also is usual method (Sambrook, et al., MolecularCloning, A Laboratory Manual, Cold Spring Harbor Laboratory.New York, 1989).Also can obtain the cDNA library of commercial offers, as the different cDNA library of Clontech company.When being used in combination the polymeric enzyme reaction technology, even few expression product also can be cloned.
Available ordinary method is screened gene of the present invention from these cDNA libraries.These methods include, but is not limited to: (1) DNA-DNA or DNA-RNA hybridization; (2) appearance of marker gene function or forfeiture; (3) level of the transcript of mensuration Novel Human Zinc Finger Protein 59; (4), detect the protein product of genetic expression by immunological technique or mensuration biologic activity.Aforesaid method can singly be used, but also several different methods combined utilization.
In (1) kind method, hybridizing used probe is and any a part of homology of polynucleotide of the present invention that at least 10 Nucleotide of its length better are at least 30 Nucleotide, are more preferably at least 50 Nucleotide, preferably at least 100 Nucleotide.In addition, within 2000 Nucleotide, preferable is within 1000 Nucleotide to the length of probe usually.Probe used herein is the dna sequence dna of chemosynthesis on the basis of gene order information of the present invention normally.Gene of the present invention itself or fragment are certainly as probe.The mark of dna probe can be used radio isotope, fluorescein or enzyme (as alkaline phosphatase) etc.
In (4) kind method, detect the protein product of Novel Human Zinc Finger Protein 59 genetic expressions and can use immunological technique such as Western blotting, radioimmunoprecipitation, enzyme-linked immunosorbent assay (ELISA) etc.
Use method (Saiki, the et al.Science1985 of round pcr DNA amplification/RNA; 230:1350-1354) be optimized for acquisition gene of the present invention.When particularly being difficult to from the library, obtain the cDNA of total length, can preferably use RACE method (the terminal rapid amplifying method of RACE-cDNA), the primer that is used for PCR can suitably be selected according to polynucleotide sequence information of the present invention disclosed herein, and available ordinary method is synthetic.Available ordinary method is as the DNA/RNA fragment by gel electrophoresis separation and purifying amplification.
The gene of the present invention that obtains as mentioned above, perhaps the polynucleotide sequence of various dna fragmentations etc. can with ordinary method such as dideoxy chain termination (Sanger et al.PNAS, 1977,74:5463-5467) measure.This class polynucleotide sequence is measured also available commercial sequencing kit etc.In order to obtain the cDNA sequence of total length, order-checking need be carried out repeatedly.Sometimes need to measure a plurality of clones' cDNA sequence, just can be spliced into the cDNA sequence of total length.
The present invention also relates to comprise the carrier of polynucleotide of the present invention, and the host cell that produces through genetically engineered with the carrier of the present invention or the zinc finger protein 59 encoding sequence of directly choosing, and the method that produces polypeptide of the present invention through recombinant technology.
Among the present invention, the polynucleotide sequence of coding Novel Human Zinc Finger Protein 59 can be inserted in the carrier, contains the recombinant vectors of polynucleotide of the present invention with formation.Term " carrier " refers to that bacterial plasmid well known in the art, phage, yeast plasmid, vegetable cell virus, mammalian cell virus are as adenovirus, retrovirus or other carrier.The carrier of Shi Yonging includes but not limited in the present invention: and the expression vector based on the T7 promotor of in bacterium, expressing (Rosenberg, et al.Gene, 1987,56:125); The pMSXND expression vector of in mammalian cell, expressing (Lee and Nathans, J Bio Chem.263:3521,1988) and at the carrier that derives from baculovirus of expressed in insect cells.In a word, as long as can duplicate in host and stablize, any plasmid and carrier may be used to make up recombinant expression vector.A key character of expression vector is to contain replication origin, promotor, marker gene and translational control element usually.
Method well-known to those having ordinary skill in the art can be used to make up the dna sequence dna that contains the Novel Human Zinc Finger Protein 59 of encoding and the expression vector of suitable transcribing/translational control element.These methods comprise (Sambroook, et al.Molecular Cloning, a LaboratoryManual, cold Spring Harbor Laboratory.New York, 1989) such as extracorporeal recombinant DNA technology, DNA synthetic technology, the interior recombinant technologys of body.Described dna sequence dna can effectively be connected on the suitable promotor in the expression vector, and is synthetic to instruct mRNA.The representative example of these promotors has: colibacillary lac or trp promotor; The PL promotor of lambda particles phage; Eukaryotic promoter comprises LTRs and some other known may command gene expression promoter in prokaryotic cell prokaryocyte or eukaryotic cell or its virus of CMV immediate early promoter, HSV thymidine kinase promoter, early stage and late period SV40 promotor, retrovirus.Expression vector also comprises ribosome bind site that translation initiation is used and transcription terminator etc.Inserting enhancer sequence in carrier will make its transcribing in higher eucaryotic cells be enhanced.Enhanser is the cis acting factor that DNA expresses, and nearly 10 to 300 base pairs act on promotor transcribing with enhancing gene usually.Can for example be included in the SV40 enhanser of 100 to 270 base pairs of replication origin side in late period one, at the polyoma enhanser of replication origin side in late period one and adenovirus enhanser etc.
In addition, expression vector preferably comprises one or more selected markers, to be provided for selecting the phenotypic character of transformed host cells, cultivate Tetrahydrofolate dehydrogenase, neomycin resistance and the green fluorescent protein (GFP) of usefulness as eukaryotic cell, or be used for colibacillary tsiklomitsin or amicillin resistance etc.
Persons skilled in the art all know how to select appropriate carriers/transcriptional regulatory element (as promotor, enhanser etc.) and selected marker.
Among the present invention, the polynucleotide of coding Novel Human Zinc Finger Protein 59 or the recombinant vectors that contains these polynucleotide can transform or transduce into host cell, contain the genetically engineered host cell of these polynucleotide or recombinant vectors with formation.Term " host cell " refers to prokaryotic cell prokaryocyte, as bacterial cell; Or eukaryotic cell such as low, as yeast cell; Or higher eucaryotic cells, as mammalian cell.Representative example has: intestinal bacteria, streptomyces; Bacterial cell such as Salmonella typhimurium; Fungal cell such as yeast; Vegetable cell; Insect cell such as fruit bat S2 or Sf9; Zooblast such as CHO, COS or Bowes melanoma cells etc.
Can carry out with routine techniques well known to those skilled in the art with dna sequence dna of the present invention or the recombinant vectors transformed host cell that contains described dna sequence dna.When the host was prokaryotic organism such as intestinal bacteria, the competent cell that can absorb DNA can be used CaCl in exponential growth after date results
2Method is handled, and used step is well-known in this area.Alternative is to use MgCl
2If desired, transforming also the method for available electroporation carries out.When the host is an eukaryote, can select following DNA transfection method for use: coprecipitation of calcium phosphate method, perhaps conventional mechanical method such as microinjection, electroporation, liposome packing etc.
By the recombinant DNA technology of routine, utilize polynucleotide sequence of the present invention to can be used to express or produce Novel Human Zinc Finger Protein 59 (Science, 1984 of reorganization; 224:1431).In general following steps are arranged:
(1). with the polynucleotide (or varient) of coding Novel Human Zinc Finger Protein 59 of the present invention, or transform or the transduction proper host cell with the recombinant expression vector that contains these polynucleotide;
(2). in suitable medium, cultivate host cell;
(3). separation, protein purification from substratum or cell.
In step (2), according to used host cell, used substratum can be selected from various conventional substratum in the cultivation.Under the condition that is suitable for the host cell growth, cultivate.After host cell grows into suitable cell density, induce the promotor of selection with suitable method (as temperature transition or chemical induction), cell is cultivated for some time again.
In step (3), recombinant polypeptide can wrap and be expressed or be secreted into the extracellular in cell or on cytolemma.If desired, can utilize its physics, the separating by various separation methods with other characteristic and the albumen of purification of Recombinant of chemistry.These methods are well-known to those skilled in the art.These methods include, but are not limited to: conventional renaturation is handled, protein precipitant is handled (salt analysis method), centrifugal, the broken bacterium of infiltration, the combination of ultrasonication, super centrifugal, sieve chromatography (gel-filtration), adsorption chromatography, ion exchange chromatography, high performance liquid chromatography (HPLC) and other various liquid chromatography (LC) technology and these methods.
Discover, most of members in the zinc finger protein are the transcriptional regulator of genetic expression in the organism, relevant with the gene transcription regulation and control, these proteic abnormal expressions will cause the generation of various growth disorder diseases, various tumours, various heredopathia and disease of immune system etc.
Inventor's zinc finger protein 59 albumen can be used for treating or prevent because the disease that this protein abnormal expression caused.These diseases include but not limited to: grow disorder disease; The canceration of various tissues is as leukemia, lymphoma, melanoma, sarcoma, myelomatosis, teratoma etc.; Adrenal carcinoma, bladder cancer, osteocarcinoma, bone marrow cancer, the cancer of the brain, mammary cancer, uterus carcinoma, carcinoma of gallbladder, nervous center cancer, kidney, liver cancer, lung cancer, thyroid carcinoma, thymic carcinoma etc.; Various heredopathias; Diseases such as disease that the cytodifferentiation proliferative abnormality caused such as hyperthyroidism, hypothyroidism, gastritis, polyp of colon, gastro-duodenal ulcer; Disease of immune system such as cleft hand, foot's disease and shellfish syndrome Weis two etc.
The antagonist of polypeptide of the present invention and this polypeptide, agonist and inhibitor can be directly used in disease treatment, for example, can treat the generation of various growth disorder diseases, various tumours, various heredopathia and disease of immune system etc.
The present invention also provides SCREENED COMPOUND to identify the method that improves (agonist) or check the medicament of (antagonist) Novel Human Zinc Finger Protein 59.Agonist improves Novel Human Zinc Finger Protein 59 biological function such as stimulate cellular proliferation, and antagonist prevention disorder such as the various cancer relevant with cell hyperproliferation with treatment.For example, can in the presence of medicine, the film preparation of mammalian cell or expressing human zinc finger protein 59 be cultivated with the Novel Human Zinc Finger Protein 59 of mark.Measure the medicine raising then or check this interactional ability.
The antagonist of Novel Human Zinc Finger Protein 59 comprises antibody, compound, acceptor disappearance thing and the analogue etc. that filter out.The antagonist of Novel Human Zinc Finger Protein 59 can combine and eliminate its function with Novel Human Zinc Finger Protein 59, or suppresses the generation of this polypeptide, or combines with the avtive spot of this polypeptide and to make this polypeptide can not bring into play biological function.
In screening during as the compound of antagonist, Novel Human Zinc Finger Protein 59 can be added during bioanalysiss measure, determine to interactional influence between Novel Human Zinc Finger Protein 59 and its acceptor whether compound is antagonist by measuring compound.With the same quadrat method of above-mentioned SCREENED COMPOUND, can filter out the acceptor disappearance thing and the analogue of antagonist action.Can be incorporated into the rondom polypeptide storehouse that solid formation forms by the various amino acid that may make up by screening with Novel Human Zinc Finger Protein 59 bonded peptide molecules obtains.During screening, generally tackle Novel Human Zinc Finger Protein 59 molecules and carry out mark.
The invention provides and use polypeptide, and fragment, derivative, analogue or their cell are as the method for antigen with production antibody.These antibody can be polyclonal antibody or monoclonal antibody.The present invention also provides the antibody at Novel Human Zinc Finger Protein 59 antigenic determinants.These antibody include, but is not limited to: the fragment that polyclonal antibody, monoclonal antibody, chimeric antibody, single-chain antibody, Fab fragment and Fab expression library produce.
The method of the available Novel Human Zinc Finger Protein 59 direct injection immune animals of the production of polyclonal antibody (as rabbit, mouse, rat etc.) obtains, and multiple adjuvant can be used for the enhancing immunity reaction, includes but not limited to freund's adjuvant etc.The technology of monoclonal antibody of preparation Novel Human Zinc Finger Protein 59 include but not limited to hybridoma technology (Kohler andMilstein.Nature, 1975,256:495-497), three knurl technology, people B-quadroma technology, EBV-hybridoma technology etc.With the variable region bonded chimeric antibody in human constant region and inhuman source can with existing technology production (Morrison et al, PNAS, 1985,81:6851).And the technology of existing manufacture order chain antibody (U.S.Pat No.4946778) also can be used for producing the single-chain antibody of anti-Novel Human Zinc Finger Protein 59.
The antibody of anti-Novel Human Zinc Finger Protein 59 can be used in the immunohistochemistry technology, detects the Novel Human Zinc Finger Protein 59 in the biopsy specimen.
With the also available labelled with radioisotope of Novel Human Zinc Finger Protein 59 bonded monoclonal antibodies, inject in the body and can follow the tracks of its position and distribution.This radiolabeled antibody can be used as a kind of atraumatic diagnostic method and is used for the location of tumour cell and has judged whether transfer.
Antibody also can be used for designing the immunotoxin at a certain privileged sites in the body.As the monoclonal antibody of Novel Human Zinc Finger Protein 59 high-affinities can with bacterium or plant poison (as diphtheria toxin, ricin, abrine etc.) covalent attachment.A kind of usual method is with sulfydryl linking agent such as SPDP, attacks the amino of antibody, by the exchange of disulfide linkage, toxin is incorporated on the antibody, and this hybrid antibody can be used for killing Novel Human Zinc Finger Protein 59 positive cells.
The disease that antibody among the present invention can be used for treating or prevention and Novel Human Zinc Finger Protein 59 are relevant.The antibody that gives suitable dosage can stimulate or block the generation or the activity of Novel Human Zinc Finger Protein 59.
The invention still further relates to the diagnostic testing process of quantitative and detection and localization Novel Human Zinc Finger Protein 59 levels.These tests are known in the art, and comprise that FISH measures and radioimmunoassay.Novel Human Zinc Finger Protein 59 levels that detected in the test can be with laying down a definition the importance of Novel Human Zinc Finger Protein 59 in various diseases and be used to the disease of diagnosing Novel Human Zinc Finger Protein 59 to work.
Polypeptide of the present invention also can be used as the peptide spectrum analysis, for example, the polypeptide available physical, chemistry or enzyme carry out the specificity cutting, and carries out the two-dimentional or three-dimensional gel electrophoresis analysis of one dimension, be more preferably and carry out mass spectroscopy.
The polynucleotide of coding Novel Human Zinc Finger Protein 59 also can be used for multiple therapeutic purpose.Gene therapy technology can be used for treating because cell proliferation, growth or the metabolic disturbance due to the nothing expression of Novel Human Zinc Finger Protein 59 or the unusual/non-activity expression.The gene therapy vector (as virus vector) of reorganization can be designed for the Novel Human Zinc Finger Protein 59 of expressing variation, to suppress endogenic Novel Human Zinc Finger Protein 59 activity.For example, a kind of Novel Human Zinc Finger Protein 59 of variation can be the Novel Human Zinc Finger Protein 59 that shortens, lacked signal conduction function territory, though can combine with the substrate in downstream, lacks signaling activity.Therefore the gene therapy vector of reorganization can be used for treating the disease of Novel Human Zinc Finger Protein 59 expression or active caused by abnormal.Deriving from viral expression vector such as retrovirus, adenovirus, adeno-associated virus (AAV), hsv, parvovirus etc. can be used for the polynucleotide of coding Novel Human Zinc Finger Protein 59 are transferred in the cell.The method of recombinant viral vector that structure carries the polynucleotide of coding Novel Human Zinc Finger Protein 59 is found in existing document (Sambrook, et al.).The polynucleotide of reorganization coding Novel Human Zinc Finger Protein 59 can be packaged in the liposome and be transferred in the cell in addition.
Polynucleotide import tissue or intracellular method comprises: directly be injected into polynucleotide in the in-vivo tissue; Or external by carrier (as virus, phage or plasmid etc.) earlier with the polynucleotide transfered cell in, again cell is transplanted in the body etc.
Suppress the oligonucleotide (comprising sense-rna and DNA) of Novel Human Zinc Finger Protein 59 mRNA and ribozyme also within the scope of the invention.Ribozyme is the enzyme sample RNA molecule that a kind of energy specificity is decomposed specific RNA, and its mechanism of action is to carry out the endonuclease effect after ribozyme molecule and the hybridization of complementary target RNA-specific.The RNA of antisense and DNA and ribozyme can obtain with existing any RNA or DNA synthetic technology, as the technology widespread use of solid phase phosphoamide chemical synthesis synthetic oligonucleotide.Antisense rna molecule can be transcribed acquisition by the dna sequence dna of this RNA that encodes in external or body.This dna sequence dna has been incorporated into the downstream of rna polymerase promoter of carrier.In order to increase the stability of nucleic acid molecule, available several different methods is modified it, and as increasing the sequence length of both sides, the connection between the ribonucleoside is used phosphoric acid thioester bond or peptide bond but not phosphodiester bond.
The polynucleotide of coding Novel Human Zinc Finger Protein 59 can be used for the diagnosis with the relative disease of Novel Human Zinc Finger Protein 59.The unconventionality expression of the expression that the polynucleotide of coding Novel Human Zinc Finger Protein 59 can be used for detecting Novel Human Zinc Finger Protein 59 people's zinc finger protein 59 whether or under morbid state.As the dna sequence dna of the Novel Human Zinc Finger Protein 59 of encoding can be used for biopsy specimen is hybridized to judge the expression situation of Novel Human Zinc Finger Protein 59.Hybridization technique comprises the Southern blotting, Northern blotting, in situ hybridization etc.These technological methods all are disclosed mature technologies, and relevant test kit all can obtain from commercial channels.Part or all of polynucleotide of the present invention can be used as probe stationary on microarray (Microarray) or DNA chip (being called " gene chip " again), is used for analyzing the differential expression analysis and the gene diagnosis of tissue gene.The special primer of personnel selection zinc finger protein 59 carries out the transcription product that RNA-polymerase chain reaction (RT-PCR) amplification in vitro also can detect Novel Human Zinc Finger Protein 59.
The sudden change that detects Novel Human Zinc Finger Protein 59 genes also can be used for diagnosing the relevant disease of Novel Human Zinc Finger Protein 59.The form of Novel Human Zinc Finger Protein 59 sudden change comprises that the point mutation compared with normal wild type Novel Human Zinc Finger Protein 59 dna sequence dnas, transposition, disappearance, reorganization and other are any unusual etc.Available existing technology such as Southern blotting, dna sequence analysis, PCR and in situ hybridization detect sudden change.In addition, sudden change might influence proteic expression, therefore can judge indirectly that with Northern blotting, Western blotting gene has or not sudden change.
Sequence of the present invention identifies it also is valuable to karyomit(e).This sequence can be specifically at certain bar human chromosome particular location and and can with its hybridization.At present, need to identify the concrete site of each gene on the karyomit(e).Now, have only chromosomal marker thing seldom to can be used for the marker chromosomes position based on actual sequence data (repetition polymorphism).According to the present invention, for these sequences are associated with disease related gene, its important the first step is positioned these dna sequence dnas on the karyomit(e) exactly.
In brief, prepare PCR primer (preferred 15-35bp), sequence can be positioned on the karyomit(e) according to cDNA.Then, these primers are used for the somatocyte hybrid cell that the PCR screening contains each bar human chromosome.Have only those hybrid cells that contain corresponding to the people's gene of primer can produce the fragment of amplification.
The PCR localization method of somatocyte hybrid cell is that DNA is navigated to concrete chromosomal quick method.Use Oligonucleolide primers of the present invention,, can utilize one group to realize inferior location from specific chromosomal fragment or a large amount of genomic clone by similar approach.Other the similar strategy that can be used for chromosomal localization comprises in situ hybridization, uses the karyomit(e) prescreen and the hybridization preliminary election of the airflow classification of mark, thereby makes up the special cDNA storehouse of karyomit(e).
The cDNA clone is carried out fluorescence in situ hybridization (FISH) with Metaphase Chromosome, can in a step, accurately carry out chromosomal localization.The summary of this technology is referring to Verma etc., Human Chromosomes:a Manualof Basic Techniques, Pergamon Press, New York (1988).
In case sequence is positioned to chromosome position accurately, the physical location of this sequence on karyomit(e) just can be associated with the gene map data.These data for example are found in, V.Mckusick, MendelianInheritance in Man (can by with the online acquisition of Johns Hopkins University Welch Medical Library).Can pass through linkage analysis then, determine gene and navigated to relation between the disease on the chromosomal region already.
Then, need to measure ill and not cDNA between diseased individuals or genome sequence difference.If observe certain sudden change in some or all of diseased individuals, and this sudden change is not observed in any normal individual, then this sudden change may be the cause of disease of disease.More ill and diseased individuals not is usually directed at first seek the variation of structure in the karyomit(e), as from the horizontal visible of karyomit(e) or use based on detectable disappearance of the PCR of cDNA sequence or transposition.Resolving power according to present physical mapping and assignment of genes gene mapping technology, being accurately positioned to the cDNA of the chromosomal region relevant with disease, can be a kind of (the supposing that 1 megabasse mapping resolving power and every 20kb are corresponding to a gene) between 50 to 500 potential Disease-causing genes.
Polypeptide of the present invention, polynucleotide and stand-in thereof, agonist, antagonist and inhibitor and suitable pharmaceutical carrier combination back can be used.These carriers can be water, glucose, ethanol, salt, damping fluid, glycerine and their combination.Composition comprises the polypeptide or the antagonist of safe and effective amount and carrier and the vehicle that does not influence effect of drugs.These compositions can be used as medicine and are used for disease treatment.
The present invention also provides medicine box or the test kit that contains one or more containers, and one or more medicinal compositions compositions of the present invention are housed in the container.With these containers, can have by the given indicative prompting of government authorities of making, using or selling medicine or biological products, the government authorities that this prompting reflects production, uses or sells permits it to use on human body.In addition, polypeptide of the present invention can be used in combination with other treatment compound.
Pharmaceutical composition can be with mode administration easily, as by in part, intravenously, intraperitoneal, intramuscular, subcutaneous, the nose or the route of administration of intracutaneous.Novel Human Zinc Finger Protein 59 comes administration with the amount that treats and/or prevents concrete indication effectively.The amount and the dosage range that are applied to patient's Novel Human Zinc Finger Protein 59 will depend on many factors, as administering mode, person's to be treated healthiness condition and diagnostician's judgement.
Following accompanying drawing is used to illustrate specific embodiments of the present invention, and is not used in qualification by the scope of the invention that claims defined.
Fig. 1 is the amino acid sequence homology comparison diagram of inventor's zinc finger protein 59 and homologous protein Novel Human Zinc Finger Protein 84.The top sequence is a Novel Human Zinc Finger Protein 59, and the below sequence is a Novel Human Zinc Finger Protein 84.Same amino acid represents with monocase amino acid that between two sequences similar amino acid is represented with "+".
Fig. 2 is the polyacrylamide gel electrophoresis figure (SDS-PAGE) of isolating Novel Human Zinc Finger Protein 59.58.5kDa be proteinic molecular weight.The arrow indication is isolated protein band.
Below in conjunction with specific embodiment, further set forth the present invention.Should be understood that these embodiment only to be used to the present invention is described and be not used in and limit the scope of the invention.The experimental technique of unreceipted actual conditions in the following example, usually according to people such as normal condition such as Sambrook, molecular cloning: laboratory manual (New York:ColdSpring Harbor Laboratory Press, 1989) condition described in, or the condition of advising according to manufacturer.
Embodiment 1: the clone of Novel Human Zinc Finger Protein 59cDNA
Extract the total RNA of people's tire brain with guanidinium isothiocyanate/phenol/chloroform single stage method.From total RNA, separate poly (A) mRNA with Quik mRNAIsolation Kit (Qiegene company product).2ug poly (A) mRNA forms cDNA through reverse transcription.Clone test kit (available from Clontech) with SmartcDNA and cDNA fragment orientation is inserted on the multiple clone site of pBSK (+) carrier (Clontech company product), transform DH5 α bacterium and form the cDNA library.Measure all clones' 5 ' and 3 ' terminal sequence with Dyeterminate cycle reaction sequencing kit (Perkin-Elmer company product) and ABI 377 automatic sequencings views (Perkin-Elmer company).CDNA sequence and the existing public dna sequence data storehouse (Genebank) measured are compared, and the cDNA sequence that found that one of them clone (0459b12) is new DNA.By synthetic a series of primers the contained insertion cDNA fragment of this clone is carried out two-way mensuration.The result shows, the contained full-length cDNA of 0459b12 clone is 2021bp (shown in Seq ID NO:1), from 191bp to 1789bp the open reading frame (ORF) of a 532bp, the new protein (shown in Seq ID NO:2) of encoding arranged.We are with this clone's called after pBS-0459b12, encoded protein matter called after Novel Human Zinc Finger Protein 59.
Embodiment 2:cDNA clone's homology retrieval
With the sequence and the encoded protein sequence thereof of Novel Human Zinc Finger Protein 59 genes of the present invention, with Blast program (Basiclocal Alignment search tool) [Altschul, SF et al.J.Mol.Biol.1990; 215:403-10], carry out the homology retrieval at databases such as Genbank, Swissport.The gene the highest with Novel Human Zinc Finger Protein 59 dna homologs of the present invention is a kind of known Novel Human Zinc Finger Protein 84 genes, and its encoded protein number is M27878 in the access of Genbank.Protein homology the results are shown in Fig. 1, both height homologies, and its homogeny is 47%; Similarity is 62%.
Embodiment 3: with RT-PCR method human cloning zinc finger protein 59 gene
Total RNA is a template with fetus brain cell, is that primer carries out the synthetic cDNA of reverse transcription reaction with oligo-dT, with behind the test kit purifying of Qiagene, carries out pcr amplification with following primer:
Primer1: 5’-GTATCTGGAGAAAATAGAGGTTC-3’ (SEQ?ID?NO.3)
Primer2:5 '-TTAAAAGTACTTGGGCTTCCTTT-3 ' (SEQ ID NO.4) Primer1 is the forward sequence that begins of 1bp that is positioned at the 5 ' end of SEQ ID NO1; Primer2 be SEQ ID NO:1 in 3 ' end reverse sequence.The condition of amplified reaction: in the reaction volume of 50 μ l, contain 50mmol/LKCl, 10mmol/L Tris-Cl, (pH8.5), 1.5mmol/LMgCl
2, 200 μ mol/L dNTP, 10pmol primer, the Taq archaeal dna polymerase of 1U (Clontech company product).Go up by 25 cycles of following conditioned response at PE9600 type DNA thermal cycler (Perkin-Elmer company): 94 ℃, 30sec; 55 ℃, 30sec; 72 ℃, 2min.When RT-PCR, establish the blank negative contrast of positive contrast of β-actin and template simultaneously.Amplified production is connected to (Invitrogen company product) on the PCR carrier with the test kit purifying of QIAGEN company with TA clone test kit.The dna sequence analysis result shows that the dna sequence dna of PCR product and the 1-2021bp shown in the SEQ ID NO:1 are identical.
Embodiment 4:Northern blotting analyst zinc finger protein 59 expression of gene:
Extract total RNA[Anal.Biochem 1987,162,156-159 with single stage method].This method comprises acid guanidine thiocyanate phenol-chloroform extracting.Promptly use 4M guanidinium isothiocyanate-25mM Trisodium Citrate, 0.2M sodium acetate (pH4.0) advances ground homogenate to tissue, adds the phenol of 1 times of volume and the chloroform-primary isoamyl alcohol (49: 1) of 1/5 volume, and is centrifugal after mixing.The sucking-off aqueous phase layer adds Virahol (0.8 volume) and with the centrifugal RNA precipitation that obtains of mixture.With RNA precipitation 70% washing with alcohol that obtains, dry and soluble in water.With 20 μ g RNA, on 1.2% sepharose that contains 20mM3-(N-morpholino) propanesulfonic acid (pH7.0)-5mM sodium acetate-1mMEDTA-2.2M formaldehyde, carry out electrophoresis.Be transferred on the nitrocellulose filter then.With α-
32PdATP prepares by random priming
32The dna probe of P-mark.Used dna probe is Novel Human Zinc Finger Protein 59 coding region sequences (191bp to 1789bp) of pcr amplification shown in Figure 1.Will
32The probe of P-mark (about 2 * 10
6Cpm/ml) spend the night in 42 ℃ of hybridization in a solution with the nitrocellulose filter that has shifted RNA, this solution comprises 50% methane amide-25mMKH2PO4 (pH7.4)-5 * SSC-5 * Denhardt ' s solution and 200 μ g/ml salmon sperm DNAs.After the hybridization, filter membrane is washed 30min in 55 ℃ in 1 * SSC-0.1%SDS.Then, analyze with quantitative with PhosphorImager.
Embodiment 5: the expression of recombinant human zinc finger protein 59 gene in vitro, separation and purifying
According to SEQ ID NO:1 and coding region sequence shown in Figure 1, design a pair of specificity amplification primer, sequence is as follows:
Primer3:5’-CCCCCATGGATGATCCAGGCCCAGGAATCCAT-3’ (Seq?IDNo:5)
5 ' end of these two sections primers of Primer4:5 '-CCCGGATCCCTATGGGTTTTCTGTAACATAAA-3 ' (Seq IDNo:6) contains NcoI and BamHI restriction enzyme site respectively, be respectively target gene 5 end and 3 thereafter, the encoding sequence of end, NcoI and BamHI restriction enzyme site are corresponding to expression vector plasmid pET-28b (+) (Novagen company product, Cat.No.69865.3) the selectivity restriction enzyme site on.With the pBS-0459b12 plasmid that contains the total length goal gene is template, carries out the PCR reaction.The PCR reaction conditions is: contain pBS-0459b12 plasmid 10pg, primer Primer-3 and Primer-4 among the cumulative volume 50 μ l and be respectively 10pmmol, Advantage polymerase Mix (Clontech company product) 1 μ l.Loop parameter: 94 ℃ of 20s, 60 ℃ of 30s, 68 ℃ of 2 min, totally 25 circulations.Respectively amplified production and plasmid pET-28 (+) are carried out double digestion with NcoI and BamHI, reclaim big fragment respectively, and connect with the T4 ligase enzyme.Connect product and transform, after the dull and stereotyped overnight incubation of the LB that contains kantlex (final concentration 30 μ g/ml), use the colony polymerase chain reaction (PCR) method screening positive clone, and check order with the big enterobacterial Dh5 of Calcium Chloride Method α.Select the correct positive colony of sequence (pET-0459B12) with Calcium Chloride Method with recombinant plasmid transformed large intestine bar BL21 (DE3) plySs (Novagen company product).In the LB liquid nutrient medium that contains kantlex (final concentration 30 μ g/ml), host bacterium BL21 (pET-0459B12) is cultured to logarithmic phase at 37 ℃, adds IPTG to final concentration 1mmol/L, continues to cultivate 5 hours.Centrifugal collection thalline, through the broken bacterium of ultrasonic wave, centrifugal collection supernatant with carrying out chromatography with 6 Histidines (6His-Tag) bonded affinity column His.Bind Quick Cartridge (Novagen company product), has obtained the target protein Novel Human Zinc Finger Protein 59 of purifying.Through the SDS-PAGE electrophoresis, obtain a single band (Fig. 2) at the 58.9kDa place.This band is transferred on the pvdf membrane carries out the n terminal amino acid sequential analysis with the Edams hydrolysis method, 15 amino acid of N-end hold 15 amino-acid residues identical with the N-shown in the SEQ ID NO:2 as a result.
Embodiment 6: anti-Novel Human Zinc Finger Protein 59 production of antibodies
With synthetic following Novel Human Zinc Finger Protein 59 specific polypeptide: the NH of Peptide synthesizer (PE company product)
2-Met-Ile-Gln-Ala-Gln-Glu-Ser-Ile-Thr-Leu-Glu-Asp-Val-Ala-Val-COOH (SEQ ID NO:7).Form compoundly with hemocyanin and bovine serum albumin coupling this polypeptide respectively, method is referring to Avrameas, et al.Immunochemistry, 1969; 6:43.Add the complete Freund's adjuvant immunizing rabbit with the above-mentioned hemocyanin polypeptide complex of 4mg, add the incomplete Freund's adjuvant booster immunization once with the hemocyanin polypeptide complex again after 15 days.Employing is done the titre that ELISA measures antibody in the rabbit anteserum through the titer plate of 15 μ g/ml bovine serum albumin polypeptide complex bag quilts.From the rabbit anteserum of antibody positive, separate total IgG with albumin A-Sepharose.Polypeptide is incorporated on the Sepharose4B post of cyanogen bromide-activated, from total IgG, separates anti-peptide antibody with affinity chromatography.Immuno-precipitation proof antibody purified can combine with Novel Human Zinc Finger Protein 59 specifically.
Sequence table
(1) general information:
(ii) denomination of invention: new Novel Human Zinc Finger Protein 59 and encoding sequence thereof
(iii) sequence number: 7
(2) information of SEQ ID NO:1:
(i) sequence signature:
(A) length: 2021bp
(B) type: nucleic acid
(C) chain: two strands
(D) topological framework: linearity
(ii) molecule type: cDNA
( xi ) :SEQ ID NO:1: 1 GTATCTGGAGAAAATAGAGGTTCTGACTCCTCAGGAGCAAAAAACATAACCTGAAGAGGG 61 AGGAAGTGGATTTGGGGTTCACCATTTCTTGGGGCACACTTGATTGAAAACTGAGACTTC121 TGAAGAGAAGGCCAGAAGATACAAAGACAGACCATCCCAGTTGAATGCTGTCTTCCAAGA181 ACAGAAGGAAATGATCCAGGCCCAGGAATCCATAACACTGGAGGATGTGGCTGTGGACTT241 CACTTGGGAGGAGTGGCAACTCCTGGGCGCTGCTCAGAAGGACCTGTACCGGGACGTGAT301 GTTGGAGAACTACAGCAACCTGGTGGCAGTGGGGTATCAAGCCAGCAAACCGGATGCACT361 CTTCAAGTTGGAACAAGGAGAACAACTGTGGACAATTGAAGATGGAATCCACAGTGGAGC421 CTGTTCAGACATATGGAAAGTTGATCATGTGCTGGAGCGCTTGCAGAGTGAAAGCCTGGT481 GAACAGAAGGAAACCATGTCATGAACATGATGCATTTGAAAATATTGTTCATTGCAGCAA541 AAGTCAGTTTCTGTTAGGGCAAAATCATGATATATTTGACTTACGTGGAAAAAGTTTGAA601 ATCCAATTTAACTTTAGTTAACCAGAGCAAAGGCTATGAAATAAAGAACTCTGTTGAGTT661 TACTGGAAATGGGGACTCCTTTCTTCATGCTAACCATGAACGACTTCATACTGCAATTAA721 ATTCCCTGCAAGTCAAAAACTCATCAGCACTAAGTCCCAATTCATCAGTCCCAAGCATCA781 GAAAACACGAAAATTAGAGAAGCATCATGTGTGCAGTGAATGTGGGAAAGCCTTCATCAA841 GAAGTCTTGGCTAACTGATCACCAGGTAATGCATACAGGAGAGAAACCCCACAGATGTAG901 TCTATGTGAGAAAGCCTTCTCCAGAAAGTTCATGCTTACTGAACATCAGCGAACTCATAC 961 AGGAGAAAAACCTTATGAATGCCCTGAATGTGGCAAAGCCTTTCTCAAGAAATCACGGCT1021 CAACATACATCAGAAAACACATACCGGAGAGAAACCCTATATATGCAGTGAATGTGGAAA1081 AGGCTTCATCCAGAAAGGAAATCTCATTGTACACCAGCGAATTCATACAGGTGAGAAACC1141 TTATATATGCAATGAATGTGGAAAAGGCTTCATTCAGAAGACGTGTCTCATAGCACATCA1201 GAGATTTCACACAGGAAAGACGCCCTTTGTGTGCAGTGAATGTGGAAAATCCTGTTCTCA1261 GAAATCAGGTCTCATTAAACATCAAGGAATTCACACAGGAGAGAAACCCTTTGAATGTAG1321 TGAATGTGGGAAAGCCTTTAGCACAAAGCAAAAGCTCATTGTCCATCAAAGGACTCATAC1381 AGGAGAGAGACCCTATGGCTGTAACGAGTGTGGGAAAGCGTTTGCGTATATGTCGTGTCT1441 GGTTAAGCATAAGAGAATACACACAAGGGAGAAACAAGAGGCAGCCAAGGTGGAAAATCC1501 TCCTGCAGAGAGGCACAGCTCATTACACACCAGTGATGTCATGCAGGAGAAAAACTCTGC1561 TGACGGGGCGACTACACAAGTGCCTTCTGTGGCCCCTCAGACATCATTAAACATCAGCGG1621 CCTCCTCGCAAACAGGAACGTAGTCCTTGTGGGACAGCCAGTGGTCAGATGTGCAGCCTC1681 AGGAGATAACAGAGGATTTGCACAGGACAGAAACCTTGTGAATGCAGTGAATGTGGTTGT1741 GCCTTCCGTGATCAATTATGTCTTATTTTATGTTACAGAAAACCCATAGGAAGAAAACTC1801 AGATCTATGTGGAAAAGGGTTGAGCAAAAATTTGTAGTTCATTATGTGGCCGAAAAGCAT1861 ATACTGAGAGAACATGTATAAGGCTGAGATAGCCTGATAAACTCATCCTATTAAAATGTA1921 TGCTGTGATACACAGGCAAATTTGATGTTAACCTAAGCACATACACAGCAATTGCTCGAC1981 TGTGTCAATTAAATGAGTAAAGGAAGCCCAAGTACTTTTAA
(3) information of SEQ ID NO:2:
(i) sequence signature:
(A) length: 532 amino acid
(B) type: amino acid
(D) topological framework: linearity
(ii) molecule type: polypeptide
( xi ) :SEQ ID NO:2: 1 Met Ile Gln Ala Gln Glu Ser Ile Thr Leu Glu Asp Val Ala Val16 Asp Phe Thr Trp Glu Glu Trp Gln Leu Leu Gly Ala Ala Gln Lys31 Asp Leu Tyr Arg Asp Val Met Leu Glu Asn Tyr Ser Asn Leu Val46 Ala Val Gly Tyr Gln Ala Ser Lys Pro Asp Ala Leu Phe Lys Leu 61 Glu Gln Gly Glu Gln Leu Trp Thr Ile Glu Asp Gly Ile His Ser 76 Gly Ala Cys Ser Asp Ile Trp Lys Val Asp His Val Leu Glu Arg 91 Leu Gln Ser Glu Ser Leu Val Asn Arg Arg Lys Pro Cys His Glu106 His Asp Ala Phe Glu Asn Ile Val His Cys Ser Lys Ser Gln Phe121 Leu Leu Gly Gln Asn His Asp Ile Phe Asp Leu Arg Gly Lys Ser136 Leu Lys Ser Asn Leu Thr Leu Val Asn Gln Ser Lys Gly Tyr Glu151 Ile Lys Asn Ser Val Glu Phe Thr Gly Asn Gly Asp Ser Phe Leu166 His Ala Asn His Glu Arg Leu His Thr Ala Ile Lys Phe Pro Ala181 Ser Gln Lys Leu Ile Ser Thr Lys Ser Gln Phe Ile Ser Pro Lys196 His Gln Lys Thr Arg Lys Leu Glu Lys His His Val Cys Ser Glu211 Cys Gly Lys Ala Phe Ile Lys Lys Ser Trp Leu Thr Asp His Gln226 Val Met His Thr Gly Glu Lys Pro His Arg Cys Ser Leu Cys Glu241 Lys Ala Phe Ser Arg Lys Phe Met Leu Thr Glu His Gln Arg Thr256 His Thr Gly Glu Lys Pro Tyr Glu Cys Pro Glu Cys Gly Lys Ala271 Phe Leu Lys Lys Ser Arg Leu Asn Ile His Gln Lys Thr His Thr286 Gly Glu Lys Pro Tyr Ile Cys Ser Glu Cys Gly Lys Gly Phe Ile301 Gln Lys Gly Asn Leu Ile Val His Gln Arg Ile His Thr Gly Glu316 Lys Pro Tyr Ile Cys Asn Glu Cys Gly Lys Gly Phe Ile Gln Lys331 Thr Cys Leu Ile Ala His Gln Arg Phe His Thr Gly Lys Thr Pro346 Phe Val Cys Ser Glu Cys Gly Lys Ser Cys Ser Gln Lys Ser Gly361 Leu Ile Lys His Gln Gly Ile His Thr Gly Glu Lys Pro Phe Glu376 Cys Ser Glu Cys Gly Lys Ala Phe Ser Thr Lys Gln Lys Leu Ile391 Val His Gln Arg Thr His Thr Gly Glu Arg Pro Tyr Gly Cys Asn406 Glu Cys Gly Lys Ala Phe Ala Tyr Met Ser Cys Leu Val Lys His421 Lys Arg Ile His Thr Arg Glu Lys Gln Glu Ala Ala Lys Val Glu436 Asn Pro Pro Ala Glu Arg His Ser Ser Leu His Thr Ser Asp Val451 Met Gln Glu Lys Asn Ser Ala Asp Gly Ala Thr Thr Gln Val Pro466 Ser Val Ala Pro Gln Thr Ser Leu Asn Ile Ser Gly Leu Leu Ala481 Asn Arg Asn Val Val Leu Val Gly Gln Pro Val Val Arg Cys Ala496 Ala Ser Gly Asp Asn Arg Gly Phe Ala Gln Asp Arg Asn Leu Val511 Asn Ala Val Asn Val Val Val Pro Ser Val Ile Asn Tyr Val Leu526 Phe Tyr Val Thr Glu Asn Pro
(4) information of SEQ ID NO:3
(i) sequence signature
(A) length: 23 bases
(B) type: nucleic acid
(C) chain: strand
(D) topological framework: linearity
(ii) molecule type: oligonucleotide
(xi) sequence description: SEQ ID NO:3:GTATCTGGAGAAAATAGAGGTTC 23
(5) information of SEQ ID NO:4
(i) sequence signature
(A) length: 23 bases
(B) type: nucleic acid
(C) chain: strand
(D) topological framework: linearity
(ii) molecule type: oligonucleotide
(xi) sequence description: SEQ ID NO:4:TTAAAAGTACTTGGGCTTCCTTT 23
(6) information of SEQ ID NO:5
(i) sequence signature
(A) length: 32 bases
(B) type: nucleic acid
(C) chain: strand
(D) topological framework: linearity
(ii) molecule type: oligonucleotide
(xi) sequence description: SEQ ID NO:5:CCCCCATGGATGATCCAGGCCCAGGAATCCAT 32
(7) information of SEQ ID NO:6
(i) sequence signature
(A) length: 32 bases
(B) type: nucleic acid
(C) chain: strand
(D) topological framework: linearity
(ii) molecule type: oligonucleotide
(xi) sequence description: SEQ ID NO:6:CCCGGATCCCTATGGGTTTTCTGTAACATAAA 32
(8) information of SEQ ID NO:7:
(i) sequence signature:
(A) length: 15 amino acid
(B) type: amino acid
(D) topological framework: linearity
(ii) molecule type: polypeptide
(xi) sequence description: SEQ ID NO:7:NH
2-Met-Ile-Gln-Ala-Gln-Glu-Ser-Ile-Thr-Leu-Glu-Asp-Val-Ala-Val-COOH
Claims (18)
1, a kind of isolated polypeptide-Novel Human Zinc Finger Protein 59 is characterized in that it includes: the polypeptide of the aminoacid sequence shown in the SEQ ID NO:2 or active fragments, analogue or the derivative of its polypeptide.
2, polypeptide as claimed in claim 1, the aminoacid sequence that it is characterized in that described polypeptide, analogue or derivative has the homogeny with the aminoacid sequence at least 95% shown in the SEQ ID NO:2.
3, polypeptide as claimed in claim 2 is characterized in that it comprises the polypeptide with the aminoacid sequence shown in the SEQ ID NO:2.
4, a kind of isolating polynucleotide, it is characterized in that described polynucleotide comprise be selected from down the group in a kind of:
(a) coding have aminoacid sequence shown in the SEQ ID NO:2 polypeptide or its fragment, analogue, derive
The polynucleotide of thing;
(b) with polynucleotide (a) complementary polynucleotide; Or
(c) with (a) or the polynucleotide of at least 70% homogeny (b) are arranged.
5, polynucleotide as claimed in claim 4 is characterized in that described polynucleotide comprise the polynucleotide that coding has aminoacid sequence shown in the SEQID NO:2.
6, polynucleotide as claimed in claim 4, the sequence that it is characterized in that described polynucleotide include the sequence of 1-2021 position among the sequence of 191-1789 position among the SEQ IDNO:1 or the SEQ ID NO:1.
7, a kind of recombinant vectors that contains exogenous polynucleotide is characterized in that it is the recombinant vectors that is formed by the described polynucleotide of arbitrary claim among the claim 4-6 and plasmid, virus or vehicle expression vector establishment.
8, a kind of genetically engineered host cell that contains exogenous polynucleotide is characterized in that it is to be selected from following a kind of host cell:
(a) host cell that transforms or transduce with the described recombinant vectors of claim 7; Or
(b) host cell that transforms or transduce with the described polynucleotide of the arbitrary claim among the claim 4-6.
9, a kind of preparation method with Novel Human Zinc Finger Protein 59 active polypeptide is characterized in that described method comprises:
(a) under expressing human zinc finger protein 59 condition, cultivate the described through engineering approaches host cell of claim 8;
(b) from culture, isolate and have Novel Human Zinc Finger Protein 59 active polypeptide.
10, a kind of can with polypeptide bonded antibody, it is characterized in that described antibody be can with Novel Human Zinc Finger Protein 59 specificity bonded antibody.
11, the compound of an analoglike or adjusting polypeptide active or expression is characterized in that they are simulation, promotion, antagonism or the active compound that suppresses Novel Human Zinc Finger Protein 59.
12, compound as claimed in claim 11 is characterized in that it is the polynucleotide sequence shown in the SEQ ID NO:1 or its segmental antisense sequences.
13, the described application of compound of a kind of claim 11, it is characterized in that described compound be used for mediator's zinc finger protein 59 in vivo, the method for external activity.
14, a kind of disease relevant or method of disease susceptibility of detecting with the described polypeptide of arbitrary claim among the claim 1-3, it is characterized in that it comprises the described polypeptide expression amount that detects, perhaps detect the activity of described polypeptide, perhaps detect and cause described expression of polypeptides amount or active unusual nucleotide diversity in the polynucleotide.
15, as the application of polypeptide as described in the arbitrary claim among the claim 1-3, it is characterized in that it is applied to screen the stand-in of Novel Human Zinc Finger Protein 59, agonist, antagonist or inhibitor; Perhaps be used for the peptide finger print identification.
16, as the application of the described nucleic acid molecule of arbitrary claim among the claim 4-6, it is characterized in that it is used for nucleic acid amplification reaction as primer, perhaps be used for hybridization, perhaps be used to make gene chip or microarray as probe.
17,, it is characterized in that forming pharmaceutical composition with safe and effective dosage and pharmaceutically acceptable carrier as the relevant unusually disease of diagnosis or treatment and Novel Human Zinc Finger Protein 59 with described polypeptide, polynucleotide or its stand-in, agonist, antagonist or inhibitor as the described polypeptide of arbitrary claim, polynucleotide or application of compound in claim 1-6 and 11.
18, the described polypeptide of arbitrary claim, polynucleotide or the application of compound among the claim 1-6 and 11 is characterized in that being used for the treatment of with described polypeptide, polynucleotide or compound the medicine of the generation of various growth disorder diseases, various tumours, various heredopathia and disease of immune system.
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