CN117721042A - Strain for producing tunicamycin complex and application thereof - Google Patents

Strain for producing tunicamycin complex and application thereof Download PDF

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Publication number
CN117721042A
CN117721042A CN202311736426.9A CN202311736426A CN117721042A CN 117721042 A CN117721042 A CN 117721042A CN 202311736426 A CN202311736426 A CN 202311736426A CN 117721042 A CN117721042 A CN 117721042A
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tunicamycin
streptomyces mobaraensis
powder
soybean
seed
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彭湘屏
孙琼
余鹤娟
朱进伟
张敏
石磊
郑玲辉
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Zhejiang Hunda Biotechnology Co ltd
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Zhejiang Hunda Biotechnology Co ltd
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Abstract

The invention discloses Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 which is preserved in China general microbiological culture Collection center (CGMCC) with the preservation number of CGMCC NO.25567. The Streptomyces mobaraensis (Streptomyces mobaraensis) (CGMCC No. 25567) is a brand new tunicamycin complex producing strain, has high production capacity, greatly improves the capability of producing tunicamycin complex compared with other strains in the prior art, has the potency of the tunicamycin complex reaching more than 1000mg/L, and is beneficial to realizing industrial production.

Description

Strain for producing tunicamycin complex and application thereof
Technical Field
The invention relates to the technical field of industrial microbial fermentation, in particular to Streptomyces mobaraensis and a method for producing tunicamycin complex by fermentation.
Background
Tunicamycin (tunicamycin) belongs to a nucleoside antibiotic and consists of four units, namely uracil, tunicamycin, N-acetylglucosamine and a fatty chain. Tunicamycin was originally isolated by Japanese scholars from Streptomyces s. Strains Clavibacter species, S.chartreusis and Corynebacterium rathayi were both shown to produce this class of antibiotic. At present, 37 tunicamycin monomer compounds are obtained through total separation and named as tunicamycins, streptovirudins, mycospocidins, MM 19290 and corynetoxins. Tigatsuki et al, to demonstrate that the four major factors of the tunicamycin complex (A.Takatsuki et al, agric.biol. Chem.41,2307-2309, 1977) have the general structure:
(1) Tunicamycin A, n=9
(2) Tunicamycin B, n=10
(3) Tunicamycin C, n=8
(4) Tunicamycin D, n=11
the tunicamycin has good inhibition effect on most gram-positive bacteria and fungi. Wherein, the average value of the Minimum Inhibitory Concentration (MIC) of bacillus thuringiensis (Bacillus thuringiensis) is 1.27 mug/mL, which is superior to positive controls such as vancomycin, kanamycin and the like. MIC for Candida albicans (Candida albicans) was 2-32. Mu.g/mL. Because of the unique pharmacological actions, the tunicamycin is hopeful to be developed into a novel antibacterial and bactericidal medicament.
AKIRA TAK ATSUKI et al (1970) were first isolated as Streptomyces dysosuperificus nov.sp strain and fermented for 100h to give a total of about 110mg/L of the tunicamycin complex, 65mg/L intracellular and 45mg/L extracellular.
U.S. patent No. 4336333a, which was published in 6 of 1982, discloses a method for preparing a tunicamycin complex by producing the tunicamycin complex by Streptomyces chartreusis (NRRL 12338) with a total yield of about 105mg/L.
In summary, the invention aims at a series of problems of low fermentation yield, long synthesis step, low yield, relatively unsafe and the like in the chemical synthesis preparation process of the tunicamycin compound obtained by fermentation in the prior art, so that the invention seeks a novel microorganism, and the tunicamycin compound with relatively high fermentation yield can be obtained by simple fermentation, thereby realizing relatively low production cost of the tunicamycin compound.
Disclosure of Invention
In order to solve the problem of the deficiency of the existing preparation method of the tunicamycin complex, the first aspect of the invention is to provide a novel tunicamycin complex producing strain which is Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 and is preserved in China general microbiological culture Collection center (CGMCC), beijing, china with the preservation number of CGMCC NO.25567, the preservation date of 2022, 8 months and 20 days, and the preservation address: no. 1 and No. 3 of the north cinquefoil of the morning sun area of beijing city.
The second aspect of the invention is to provide an application of Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 (CGMCC NO. 25567) in preparing a tunicamycin complex or a pharmaceutical composition containing the tunicamycin complex.
In a third aspect, the present invention provides a method for preparing a tunicamycin complex, which comprises the step of aerobically fermenting Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 (CGMCC No. 25567) in a nutrient medium containing a carbon source and/or a nitrogen source.
In a preferred embodiment, the above carbon source is selected from one of starch, dextrin, glucose, raffinose, sorbitol, glycerol, maltose, fructose, sucrose, L-arabinose, D-xylose, rhamnose, inositol, D-mannitol, soybean oil or a combination of the above; preferably from one of starch, dextrin, glucose, sorbitol or a combination of the above.
In a preferred embodiment, the nitrogen source is selected from one of yeast extract powder, yeast extract, soybean lecithin, soybean cake powder, cotton seed cake powder, peanut cake powder, gluten powder, corn steep liquor dry powder, soybean meal, peptone, ammonium salt, potassium salt, urea, or a combination of the foregoing; the assimilable nitrogen source is preferably selected from one of yeast extract powder, soybean meal, corn steep liquor dry powder or a combination of the above.
In a preferred embodiment, the above described nutrient medium further comprises an inorganic salt selected from the group consisting of trisodium citrate, monopotassium phosphate, dipotassium phosphate, ammonium sulfate, calcium carbonate, ferrous sulfate, zinc sulfate, copper sulfate, sodium chloride, potassium chloride, calcium chloride, magnesium sulfate, ferric chloride, manganese sulfate, or a combination of any of the above, preferably calcium carbonate, dipotassium phosphate, magnesium sulfate, potassium chloride, or a combination of any of the above.
In a preferred embodiment, the nutrient medium contains 5-50g/L of corn starch, 5-50g/L of maltodextrin, 5-60g/L of glucose, 5-50g/L of sorbitol, 1-15g/L of yeast extract powder, 5-20g/L of soybean cake powder, 5-20g/L of corn steep liquor dry powder, 1-10g/L of magnesium sulfate, 2-8g/L of dipotassium hydrogen phosphate, 1-5g/L of potassium chloride and 3-50g/L of calcium carbonate.
In a preferred embodiment, the aerobic fermentation is at a temperature of 20-35 ℃, preferably 23-28 ℃; the pH of the culture medium is 5.0-8.0, preferably 5.0-7.0; the incubation time is 24-240 hours, preferably 180-240 hours; the ventilation is from 0.1 to 2.0vvm, preferably from 0.5 to 1.2vvm.
In a preferred embodiment, the Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 (CGMCC No. 25567) is inoculated into the nutrient medium by a seed solution for the fermentation culture; wherein the seed liquid is obtained by seed culturing streptomycete HDCC00224 in a seed culture medium.
In a preferred embodiment, the seed culture medium contains soybean oil 1-10g/L, glucose 5-100g/L, soybean cake powder 5-50g/L, corn steep liquor powder 5-50g/L, and calcium carbonate 1-10g/L; preferably, soybean oil is 5g/L, glucose is 70g/L, soybean cake powder is 18.5g/L, corn steep liquor powder is 5.8g/L, and calcium carbonate is 2.5g/L.
In a preferred embodiment, the seed culture conditions are: the temperature of seed culture is 20-30 ℃, preferably 23-28 ℃; the pH of the culture medium is 5.0-8.0, preferably 5.0-7.0; the incubation time is 24 to 80 hours, preferably 24 to 60 hours.
The tunicamycin complexes of the invention were tested by HPLC under the following conditions:
the liquid phase detection method for detecting the valence of the tunicamycin complex comprises the following conditions:
chromatographic column: c18 (250 mm. Times. 460mm,3.5 μm), mobile phase A: water, mobile phase B: acetonitrile, retention time: 20min, flow rate: 1mL/min, sample injection amount: 5 μl, detection wavelength: 260nm, column temperature: (25+ -1) deg.C.
Table 1: elution procedure volume ratio of mobile phases A and B
Retention time min A% B%
0 50 50
10 30 70
10.01 50 50
15 50 50
The Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 of the invention refers to the "Bojie's bacteria identification Manual" for physiological and biochemical experiments, and the results show that: the strain is white round and flat colony on Gaoshi culture medium, has branched base wire and gas wire, and has no transverse septum and no rupture of hypha to produce chain spore. Spores do not swim, light grey, chain flex, spore circles or ovals.
The streptomyces mobaraensis (Streptomyces mobaraensis) (CGMCC NO. 25567) serving as the production strain of the tunicamycin compound is a brand-new tunicamycin compound producing strain, has high production capacity, greatly improves the capacity of producing the tunicamycin compound compared with other strains in the prior art, and can reach the titer of more than 1000 mg/L. Furthermore, the tunicamycin compound in the fermentation liquor is mainly distributed in the fungus residues, the ratio of the supernatant is lower than 0.5%, the downstream extraction and purification process can be obviously simplified, the solvent consumption is greatly reduced, the production cost of tunicamycin is reduced, the green process is realized, and the method has great significance. Is beneficial to realizing industrial production.
Drawings
Fig. 1: GYQL-296# colony morphology
Detailed Description
EXAMPLE 1 original Strain Source
Adding 4g of a surface soil sample of Qianlingshan park in Guiyang, guizhou, into 100mL of sterile water, oscillating for 10min at 250rpm, standing for slight sedimentation of soil, taking 5mL of clear liquid, inoculating into a Gao's first liquid culture medium containing 5mg/L penicillin, carrying out enrichment culture at 28 ℃ and 250rpm for 72h, diluting the bacterial liquid with sterile water in a gradient of 10:1-10:5, taking 100 mu L of each gradient diluted bacterial liquid, coating the bacterial liquid on a Gao's first solid plate containing 3mg/L penicillin, and placing the bacterial liquid in a 28 ℃ incubator for culturing for 10 days. After bacterial colony grows out, the bacterial colony is transferred to a fresh ISP2 solid culture medium by a pair of toothpicks, the bacterial colony is placed in an incubator with 28 ℃ and 55% relative humidity for 20 days, then a lawn agar block is dug by an open sterile suction head and placed on the surface of an agar plate coated with staphylococcus aureus and candida albicans respectively, the bacterial colony is placed in the incubator with 65% humidity for culture, and the generation condition of a bacteriostasis ring is observed regularly. As a result, it was found that GYQL-296# strain exhibits an inhibitory effect against Staphylococcus aureus and Candida albicans at the same time. The single colony purified by the strain is shown in figure 1, and the single colony is amplified and cultivated for seed preservation, and the original preservation number is GYQL-296#.
The strain is further inoculated into a liquid high-grade first culture medium, the culture medium is placed at 28 ℃ and 250rpm for 8 days, after pigment is produced, the culture solution is soaked in ethanol and concentrated for LCMS detection, and the series of products are found to be the tunicamycin complex.
Example 2 identification of original species
The GYQL-296# strain is used as a test strain, and physiological and biochemical experiments are carried out by referring to the Bojie's bacteria identification manual, and the results show that:
the strain is white round and flat colony on Gaoshi culture medium, and has aerial hypha and spore, spore wire rotting, loose ring or bending, spore round and oval;
the optimal growth temperature of the strain is 27-30 ℃, and the growth tolerance temperature range is 20-41 ℃;
the optimal growth pH of the strain is 6.3-7.0, and the growth tolerance pH range is 5.5-8.7;
the carbon source available by the bacteria is selected from one of glucose, raffinose, sorbose, glycerol, maltose, fructose, sucrose, L-arabinose, D-xylose, rhamnose, inositol, D-mannitol and soybean oil or a combination of the above substances; the nitrogen source available to the bacteria is selected from one of ammonium sulfate, potassium nitrate, urea or a combination of the above.
Collecting fresh thalli of the strain to be tested, extracting a total DNA template by using a Piccher method (Piccher et al, 1989) modified by a solution bacterial enzyme method, amplifying a 16S rRNA gene by using universal primers (27F and 1495R), detecting and purifying a PCR product, and directly carrying out sequence determination. Sequencing was performed by Nanjing Jinsri Biotechnology Co.
The 16S rDNA sequence of the strain is compared with sequences of related species and genus in GenBank database by BLAST, the sequence has high homology with Streptomyces mobaraensis (Streptomyces mobaraensis strain DSM 40587) and the highest homology is 99.18 percent, and meanwhile, the strain is identified as Streptomyces mobaraensis (Streptomyces mobaraensis) by combining a physiological biochemical test and an apparent characteristic test of the strain, and the classification parameters of the strain and the Streptomyces mobaraensis (Streptomyces mobaraensis) are very similar.
EXAMPLE 3 mutant screening of strains
The original strain GYQL-296# is taken as an original strain, 5-bromouracil mutagenesis is carried out, and 2-deoxyglucose resistance screening is combined to finally obtain the high-yield mutant strain of the tunicamycin compound, wherein the original number of the strain is HDCC00224, and the strain is preserved in the China general microbiological culture collection center (CGMCC) for 20 months in 2022, and the preservation number is CGMCC No.25567. The DNA sequence of the strain HDCC00224 is shown as SEQ ID NO. 1.
The specific obtaining scheme of the strain is as follows:
1. preparing a bacterial suspension: the original strain GYQL-296# is taken as an inclined spore of an original strain, and after scattering, spore suspension with uniform dispersion is obtained for standby.
2. Mutagenesis: transferring the bacterial suspension in the step 1 into a 250mL triangular flask, adding 5-bromouracil mother liquor prepared in advance, controlling the final concentration to be 120 mug/mL, and stopping the reaction after the bacterial suspension is placed in an oscillating box to oscillate for 30min.
3. Resistance screening culture: taking the final mutagenesis sample in the step 2, coating the final mutagenesis sample on a solid medium added with 0.1% of 2-deoxyglucose after gradient dilution, and placing the final mutagenesis sample in an incubator with 30 ℃ and 55% of humidity for 12 days for culturing.
The formula of the resistance screening culture medium comprises the following components: 0.1% of 2-deoxyglucose, 0.1% of ammonium sulfate, 0.05% of dipotassium hydrogen phosphate, 0.02% of magnesium sulfate and 2% of agar. pH7.0, and sterilizing at 121deg.C for 20min.
4. Dibbling and culturing: and selecting the grown resistance screening isolated colonies, and inoculating one pair of the isolated colonies to a fresh solid plate culture medium, wherein 6-12 colonies are inoculated on each plate, and culturing the plates in an incubator at 30 ℃ and 55% humidity for 8 days. The formula of the dibbling culture medium comprises the following components: glucose 0.8%, wort 1%, yeast extract 0.2%, dipotassium hydrogen phosphate 0.05%, agar powder 1.8%, pH7.0, and sterilizing at 121deg.C for 30min.
5. Seed culture: taking the cultured colony, taking a proper amount of spores by a shovel, inoculating the spore into a seed culture medium, wrapping the seed culture medium, and placing the seed culture medium on a shaking table at 28 ℃ for culturing at 250rpm for 40 hours to obtain seed liquid. The shake flask seed culture medium comprises the following components: glucose 1.4%, soybean cake powder 1.5%, corn steep liquor powder 0.23%, pH7.0, and packaging volume 20mL/250mL, and sterilizing at 121deg.C for 30min.
6. Fermentation culture: transferring the cultured shake flask seeds into a fermentation medium with an inoculum size of 10%, wrapping and placing the shake flask seeds on a shaking table at 30 ℃ for culture at 250rpm for 5 days to obtain fermentation liquor containing the tunicamycin complex. The formula of the fermentation medium comprises the following components: 7% of glucose, 1.85% of soybean meal, 0.58% of corn steep liquor powder and 0.25% of calcium carbonate. pH7.0, 30mL/250mL, and sterilizing at 121deg.C for 30min.
7. Sample processing and detection methods: mixing 1mL of fermentation broth with 4mL of absolute ethanol, performing ultrasonic treatment for 30min, centrifuging at 14000rpm for 10min, and detecting by HPLC (high performance liquid chromatography) method as follows:
column: c18 column
Wavelength: 260nm of
Column temperature: 60 DEG C
Flow rate: 1mL/min
Sample injection amount: 5 mu L
Mobile phase: A-Water, B-acetonitrile
Table 2: elution procedure volume ratio of mobile phases A and B
Retention time min A% B%
0 50 50
10 30 70
10.01 50 50
15 50 50
8. Experimental results
As detected, among 372 strains tested in this example, 11 strains had a total yield significantly higher than that of the forward mutant strain of the starting strain, wherein the 296# strain had a total yield of the tunicamycin complex of 1008mg/L at most, which was 3.34 times that of the starting strain (302 mg/L). The strain PCB has the original preservation number of HDCC00224 and is preserved in China general microbiological culture Collection center (CGMCC) of China Committee for culture Collection of microorganisms (CGMCC) No.25567 in the year 08 and 22.
Example 4 confirmation of the ability of CGMCC No.25567 Strain to produce tunicamycin Complex
500mL of the fermentation broth obtained in example 3 was collected, and after thoroughly mixing, 1g of the whole broth was taken into 5 different centrifuge tubes, each numbered Q1 to Q5. The rest fermentation liquor is frozen and centrifuged at 10000rpm for 15min, the supernatant and the fungus dreg are respectively collected, 1g of the supernatant is respectively taken in 5 different centrifuge tubes with the serial numbers of S1-S5, and 1g of the fungus dreg is respectively taken in 5 different centrifuge tubes with the serial numbers of M1-M5. All centrifuge tubes are added with 4mL of absolute ethyl alcohol, a sealing cover is screwed up, the mixture is fully and evenly vibrated, the ultrasonic treatment is carried out for 30min, the centrifugation is carried out for 10min at 14000rpm, and the HPLC detection is adopted after the microporous filtration. The test method was the same as in example 3, and the experimental results are shown in Table 3 below.
Table 3: parallel test of tunicamycin complex content in fermentation liquor
From the results listed in the table, the tunicamycin composition in the fermentation broth of the strain CGMCC No.25567 is mainly distributed in the fungus residues, and the ratio of the tunicamycin composition in the supernatant is lower than 0.5%, which indicates that the tunicamycin composition synthesized by the strain CGMCC No.25567 is not secreted outside cells in the fermentation process, which is different from the production strain in the prior art. It is worth emphasizing that the excellent characteristic can obviously simplify the downstream extraction and purification process, greatly reduce the solvent consumption, be favorable for reducing the production cost of the tunicamycin and realizing the green process, and has great significance.
The technical features of the above-described embodiments may be arbitrarily combined, and all possible combinations of the technical features in the above-described embodiments are not described for brevity of description, however, as long as there is no contradiction between the combinations of the technical features, they should be considered as the scope of the description.

Claims (11)

1. Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 is preserved in China general microbiological culture collection center (CGMCC) with the preservation number of CGMCC NO.
25567, a date of preservation of 2022, 8 months and 20 days.
2. Use of streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 according to claim 1 for the preparation of a tunicamycin complex or a pharmaceutical composition comprising a tunicamycin complex.
3. A preparation method of a tunicamycin compound is characterized by comprising the following steps:
comprising the step of aerobically fermenting Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 according to claim 1 in a nutrient medium comprising a carbon source and/or a nitrogen source.
4. A method according to claim 3, characterized in that:
the carbon source is selected from one of starch, dextrin, glucose, raffinose, sorbitol, glycerol, maltose, fructose, sucrose, L-arabinose, D-xylose, rhamnose, inositol, D-mannitol and soybean oil or a combination of the above; preferably from one of starch, dextrin, glucose, sorbitol or a combination of the above.
5. A method according to claim 3, characterized in that:
the nitrogen source is selected from one or a combination of yeast extract powder, yeast extract, soybean lecithin, soybean cake powder, cotton seed cake powder, peanut cake powder, gluten powder, corn steep liquor dry powder, soybean meal, peptone, ammonium salt, potassium salt and urea; preferably from one of yeast extract powder, soybean meal, cotton seed meal, peanut meal, corn steep liquor dry powder or a combination of the above.
6. A method according to claim 3, characterized in that:
the nutrient medium also comprises inorganic salt, wherein the inorganic salt is selected from one or a combination of any of trisodium citrate, monopotassium phosphate, dipotassium phosphate, ammonium sulfate, calcium carbonate, ferrous sulfate, zinc sulfate, copper sulfate, sodium chloride, potassium chloride, calcium chloride, magnesium sulfate, ferric chloride and manganese sulfate; the inorganic salt is preferably one or a combination of any of calcium carbonate, dipotassium hydrogen phosphate, magnesium sulfate and potassium chloride.
7. A method according to claim 3, characterized in that:
the nutrient medium contains 1-10g/L of soybean oil, 5-30g/L of glucose, 5-20g/L of soybean cake powder, 1-10g/L of corn steep liquor powder and 1-5g/L of calcium carbonate.
8. A method according to claim 3, characterized in that:
the fermentation temperature is 20-41 ℃, preferably 27-30 ℃; the pH of the culture medium is 5.5-8.7, preferably 6.3-7.0; the incubation time is 24-240 hours, preferably 180-240 hours; the ventilation is from 0.1 to 2.0vvm, preferably from 0.5 to 1.2vvm.
9. The method according to any one of claims 3-8, wherein:
the Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 is inoculated into the nutrient medium through seed liquid for the fermentation culture; the seed solution is obtained by seed culturing the Streptomyces mobaraensis (Streptomyces mobaraensis) HDCC00224 in a seed culture medium.
10. The method according to claim 9, wherein:
the seed culture medium contains soybean oil 1-10g/L, glucose 5-100g/L, soybean cake powder 5-50g/L, corn steep liquor powder 5-50g/L and calcium carbonate 1-10g/L; preferably, soybean oil is 5g/L, glucose is 70g/L, soybean cake powder is 18.5g/L, corn steep liquor powder is 5.8g/L, and calcium carbonate is 2.5g/L.
11. The method according to claim 10, wherein:
the seed culture conditions are as follows: the temperature of seed culture is 20-30 ℃, preferably 23-28 ℃; the pH of the culture medium is 5.0-8.0, preferably 5.0-7.0; the incubation time is 24 to 80 hours, preferably 24 to 60 hours.
CN202311736426.9A 2022-12-30 2023-12-15 Strain for producing tunicamycin complex and application thereof Pending CN117721042A (en)

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