CN117187267A - TOMM34 mutant gene, primer, kit and method for detecting same and application thereof - Google Patents
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Abstract
The invention relates to a TOMM34 mutant gene, a primer, a kit and a method for detecting the same and application thereof, wherein the mutant TOMM34 gene has at least one of the following mutations compared with a human genome reference sequence GRCh 37: the base of the physical position 43583804 of the chromosome 20 is mutated from A to T, and the base of the physical position 43585085 of the chromosome 20 is mutated from G to A; the cDNA sequence of the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 1: c.284T > A, c.169C > T; the TOMM34 mutant gene, the reagent for detecting the same and the like provided by the invention excavate a LIMD pathogenic gene TOMM34, and provide TOMM34 mutant gene loci, which provide important basis for LIMD early molecular screening, family genetic research and the like.
Description
Technical Field
The invention relates to a disease-related mutant gene, in particular to a TOMM34 mutant gene, a primer, a kit and a method for detecting the same and application thereof.
Background
Mitochondria are present in most cells and are the core organelles of cellular energy production. Impaired mitochondrial function can lead to mitochondrial disease. Depending on the extent, type and number of cells, mitochondrial dysfunction can manifest a wide variety of symptoms in a patient with mitochondrial disease, with the affected organs including mainly heart, muscle, eye, ear, brain, etc.
The particular feature of mitochondrial diseases is that both genetic mutations of nuclear genomic DNA (nDNA) in the nucleus, and genetic mutations of mitochondrial genomic DNA (mtDNA) in the cytoplasm can lead to mitochondrial diseases. mitochondrial diseases caused by mtDNA gene mutation usually occur later; mitochondrial diseases caused by mutations in the nDNA gene are usually seen earlier. In childhood-diagnosed mitochondrial diseases, the proportion caused by mutations in the nDNA gene is 75%. Unlike the higher diagnostic rate of adult mitochondrial disease, childhood mitochondrial disease has significantly decreased diagnostic rate due to low symptom specificity. Among them, infant lethal mitochondrial diseases (Lethal Infantile Mitochondrial Disease, LIMD) can lead to extremely high mortality in neonatal and infancy. The infant suffering from severe LIMD is suddenly ill and fails even within days or weeks after birth, so that the clinical and genetic diagnosis rate is lower. In the case of LIMD reported abroad, many spider silk and horse marks of mitochondrial disease were found only at necropsy. Thus, domestic and foreign studies indicate that the incidence of LIMD may be severely underestimated. At present, although thousands of genes have been found to play a role in the function, stability, structural maintenance, etc. of mitochondria in basic researches such as animal models, there are few reported pathogenic genes and pathogenic variations associated with LIMD.
If the LIMD can be clinically diagnosed in time, particularly accurately, LIMD infants can effectively reduce the death rate and improve the long-term prognosis by regulating and controlling the energy metabolism. In addition, due to the low gene diagnosis rate of LIMD, some parents of the infant cannot block the continued reproduction of the LIMD infant through the assisted reproduction technique or the prenatal diagnosis technique, resulting in the recurrence of the family tragedy. Therefore, the novel LIMD pathogenic gene is discovered, and a novel rapid and accurate detection kit is established, so that the method has important significance for improving the diagnosis and treatment level of the LIMD.
Disclosure of Invention
The invention aims to provide a TOMM34 mutant gene related to infant lethal mitochondrial diseases, a primer, a kit and a method for detecting the same and application thereof.
The aim of the invention is realized by the following technical scheme:
a mutant TOMM34 gene, said mutant TOMM34 gene having at least one of the following mutations compared to human genomic reference sequence GRCh 37:
the base of the physical position 43583804 of the chromosome 20 is mutated from A to T, and the base of the physical position 43585085 of the chromosome 20 is mutated from G to A;
the cDNA sequence of the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 1:
c.285T>A、c.169C>T;
the sequence of the mutant TOMM34 protein corresponding to the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 2:
tyr95ter (tyrosine 95 mutated to stop codon), p.arg57ter (arginine 57 mutated to stop codon).
Wherein, SEQ ID NO.1 and SEQ ID NO.2 are respectively as follows:
SEQ ID NO.1:
ATGGCCCCCAAATTCCCAGACTCTGTGGAGGAGCTCCGCGCCGCCGGCAATGAGAGTTTCCGCAACGGCCAGTACGCCGAGGCCTCCGCGCTCTACGGCCGCGCGCTGCGGGTGCTGCAGGCGCAAGGTTCTTCAGACCCAGAAGAAGAAAGTGTTCTCTACTCCAACCGAGCAGCATGTCACTTGAAGGATGGAAACTGCAGAGACTGCATCAAAGATTGCACTTCAGCACTGGCCTTGGTTCCCTTCAGCATTAAGCCCCTGCTGCGGCGAGCATCTGCTTATGAGGCTCTGGAGAAGTACCCTATGGCCTATGTTGACTATAAGACTGTGCTGCAGATTGATGATAATGTGACGTCAGCCGTAGAAGGCATCAACAGAATGACCAGAGCTCTCATGGACTCGCTTGGGCCTGAGTGGCGCCTGAAGCTGCCCTCAATCCCCTTGGTGCCTGTTTCAGCTCAGAAGAGGTGGAATTCCTTGCCTTCGGAGAACCACAAAGAGATGGCTAAAAGCAAATCCAAAGAAACCACAGCTACAAAGAACAGAGTGCCTTCTGCTGGGGATGTGGAGAAAGCCAGAGTTCTGAAGGAAGAAGGCAATGAGCTTGTAAAGAAGGGAAACCATAAGAAAGCTATTGAGAAGTACAGTGAAAGCCTCTTGTGTAGTAACCTGGAATCTGCCACGTACAGCAACAGAGCACTCTGCTATTTGGTCCTGAAGCAGTACACAGAAGCAGTGAAGGACTGCACAGAAGCCCTCAAGCTGGATGGAAAGAACGTGAAGGCATTCTACAGACGGGCTCAAGCCCACAAAGCACTCAAGGACTATAAATCCAGCTTTGCAGACATCAGCAACCTCCTACAGATTGAGCCTAGGAATGGTCCTGCACAGAAGTTGCGGCAGGAAGTGAAGCAGAACCTACACTAA
SEQ ID NO.2:
MAPKFPDSVEELRAAGNESFRNGQYAEASALYGRALRVLQAQGSSDPEEESVLYSNRAACHLKDGNCRDCIKDCTSALALVPFSIKPLLRRASAYEALEKYPMAYVDYKTVLQIDDNVTSAVEGINRMTRALMDSLGPEWRLKLPSIPLVPVSAQKRWNSLPSENHKEMAKSKSKETTATKNRVPSAGDVEKARVLKEEGNELVKKGNHKKAIEKYSESLLCSNLESATYSNRALCYLVLKQYTEAVKDCTEALKLDGKNVKAFYRRAQAHKALKDYKSSFADISNLLQIEPRNGPAQKLRQEVKQNLH
TRANSLOCASE OF OUTER MITOCHONDRIAL MEMBRANE 34 (mitochondrial outer membrane translocase 34, TOMM 34) gene, which contains 7 exons and encodes a TOMM34 protein of 309 amino acids and has a molecular weight of about 34KDa, is located at 20q13.12 on chromosome 20. TOMM34 plays an important role in mediating the entry of precursor proteins synthesized in the cytoplasm into mitochondria. TOMM34 binds to the mature portion of the precursor protein, interacts with cellular components, and has weak atpase activity. TOMM34 may be an important chaperone-like protein that helps to maintain the newly synthesized precursor in an unfolded, imported compatible state. However, the correlation between TOMM34 and the disease is not clear at present, and is not reported in the related literature.
The gene of the wild type TOMM34 gene in the ensembles database (www.ensembl.org) is encoded as ENSG00000025772, which is located on chromosome 20. The inventor uses genetic research screening in a large number of normal people and LIMD patient families to find that the TOMM34 gene is subjected to gene mutation to cause the lethal mitochondrial diseases of infants. The invention provides a new pathogenic mutation site of a pathogenic gene, and provides a new molecular biology basis for early molecular screening of the disease.
The first mutation and the second mutation belong to null mutation (null mutation), wherein the physical position of the first mutation at chromosome 20 is 43583804, and the base A is mutated into T; RNA level: the 285 th base of the cDNA sequence of the TOMM34 gene is mutated from T to A; protein level: the TOMM34 gene encodes the protein with tyrosine at position 95 mutated to a stop codon.
The second mutation is 43585085 at physical position of chromosome 20, the base is mutated from G to a, RNA level: the 169 th base of the cDNA sequence of the TOMM34 gene is mutated from C to T; protein level: the 57 th arginine of the TOMM34 gene encoding protein is mutated to a stop codon.
A method of detecting a mutant TOMM34 gene for non-diagnostic purposes, the method comprising detecting the presence or absence of a mutation site in the TOMM34 gene;
the mutation site is at least one of the following:
chr20 (GRCh 37) g.43583804A > T, cDNA sequence c.284T > A, p.Tyr95Ter (tyrosine at position 95 mutated to stop codon);
chr20 (GRCh 37): g.43585505G > A, cDNA sequence c.169C > T, p.Arg57Ter (arginine at position 57 mutated to stop codon).
In some embodiments, the non-diagnostic disease described herein is for purposes including, but not limited to, studying SNP distribution and polypeptides for family evolution studies. Such applications will be understood by those skilled in the art.
Some individuals carry the mutant TOMM34 gene of the invention but do not suffer from LIMD, e.g., only one chromosome carries the heterozygous genotype of the mutation. Detection of this part of the population may not involve any diagnostic purpose as these individuals are not themselves ill. The results of their detection can be used as useful information, for example as an important indicator of pre-fertility examinations, to guide fertility, or for mutation carrier screening, or as a tool for SNP distribution and polymorphism studies or to track gene mutation or family evolution. Such applications are also understood by those skilled in the art. Thus, the methods of detecting mutant TOMM34 genes or mutant TOMM34 proteins provided herein involve detecting heterozygous mutations.
The methods of detecting mutant TOMM34 genes provided herein also include detecting homozygous mutations.
In a preferred embodiment of the present invention, the method for detecting mutant TOMM34 gene comprises the step of PCR amplification using at least one of the following primers:
TOMM34_E3Fseq:ACGCTGAGTGCTCCAGATAACC(SEQ ID NO:3),
TOMM34_E3R:GCTGCTTGGGCTTGTGTCTTAT(SEQ ID NO:4);
TOMM34_E2F1:CTTGAGCCTCTGCGATTCCTGA(SEQ ID NO:5),
TOMM34_E2R1seq:GCCTGCTTCTAACTGCCCATCC(SEQ ID NO:6)。
in a preferred embodiment of the present invention, the PCR reaction procedure for amplification using primers comprises: 95 ℃ for 10min;95℃30s,64℃30s,72℃30s (35 cycles); and at 72℃for 8min.
The method for detecting the mutant TOMM34 gene comprises the following steps:
(1) Establishing a LIMD patient family clinical and genetic resource library, collecting clinical information and blood samples of the LIMD family, and extracting genome DNA;
(2) Designing an amplification and sequencing primer covering the total exon sequence of the TOMM34 gene for sequencing;
(3) The sequencing results of normal and LIMD patient family samples were aligned.
In one embodiment, the sequence determination is a Sanger sequence determination.
In other embodiments, the above method of detecting a mutant TOMM34 gene may be performed by a technique selected from the group consisting of:
nucleic acid electrophoresis, nucleic acid hybridization, ddPCR, and denaturing high performance liquid chromatography.
In other embodiments, methods of detecting mutations in the exon and exon/intron boundaries of the TOMM34 gene are also contemplated, comprising the steps of:
(1) Extracting a DNA sample from a subject;
(2) Sequencing the exome and all the exons/introns boundary sequences of the DNA sample to obtain sequenced fragments;
(3) The above sequenced fragments were aligned to a reference sequence to obtain gene exons and exon/intron boundary mutations.
A reagent for detecting a mutant TOMM34 gene, which is a nucleic acid detection probe or primer;
the nucleic acid detection probe is complementary to the mutant TOMM34 gene; the mutant TOMM34 gene has at least one of the following mutations compared to the human genomic reference sequence GRCh 37:
the base of the physical position 43583804 of the chromosome 20 is mutated from A to T, and the base of the physical position 43585085 of the chromosome 20 is mutated from G to A;
the cDNA sequence of the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 1:
c.285T>A、c.169C>T;
the region of the nucleic acid detection probe complementary to the mutant TOMM34 gene comprises a physical position or cDNA sequence position selected from at least one of:
the physical position is 43583804 th position of chromosome 20 and 43585085 th position of chromosome 20; 285 th and 169 th cDNA sequence;
the primer is at least one group of primers with the following sequences:
TOMM34_E3Fseq:ACGCTGAGTGCTCCAGATAACC(SEQ ID NO:3),
TOMM34_E3R:GCTGCTTGGGCTTGTGTCTTAT(SEQ ID NO:4);
TOMM34_E2F1:CTTGAGCCTCTGCGATTCCTGA(SEQ ID NO:5),
TOMM34_E2R1seq:GCCTGCTTCTAACTGCCCATCC(SEQ ID NO:6);
the nucleic acid detection probe is in nucleic acid pairing with the complementary region of the mutant TOMM34 gene to detect the mutant TOMM34 gene.
In other embodiments, the reagents for detecting the mutant TOMM34 gene further comprise a buffer, an enzyme, and an inorganic salt.
The template DNA is amplified by using a primer for detecting the mutant TOMM34 gene, and the mutation identification is carried out on the amplified product by sequencing or gel electrophoresis.
A kit for detecting a mutant TOMM34 gene, comprising the reagent.
In other embodiments, the kit for detecting a mutant TOMM34 gene described above further comprises a buffer and instructions for use.
Application of a reagent for detecting mutant TOMM34 gene in preparing a reagent for detecting lethal mitochondrial diseases of infants;
the reagent for detecting the infant lethal mitochondrial disease is a reagent for a gene chip, a reagent for DNA amplification, a reagent for a restriction enzyme digestion method or a reagent for sequencing.
The DNA amplification reagent may be a primer or a probe.
The reagent for the restriction enzyme digestion method can be a primer containing restriction enzyme sites and a seamless cloning buffer solution.
The sequencing reagent may be a primer, a detection buffer.
The application of a reagent for detecting mutant TOMM34 gene in early molecular screening of infant lethal mitochondrial diseases is the diagnosis of non-diseases.
The application of the kit for detecting the mutant TOMM34 gene in early molecular screening of the infant lethal mitochondrial disease is the diagnosis of non-disease.
Compared with the prior art, the invention has the advantages that:
the invention provides a TOMM34 mutant gene, a reagent, a primer, a kit and a method for detecting the same, and application thereof, creatively digs out a LIMD pathogenic gene TOMM34, and provides a TOMM34 mutant gene locus, which provides important basis for early molecular screening, family genetic research and genetic counseling of infant lethal mitochondrial diseases.
Drawings
In order to more clearly illustrate the technical solutions of the embodiments of the present invention, the drawings that are needed in the embodiments will be briefly described below, it being understood that the following drawings only illustrate some embodiments of the present invention and therefore should not be considered as limiting the scope, and other related drawings may be obtained according to these drawings without inventive effort for a person skilled in the art.
FIG. 1 is a family diagram;
FIG. 2 is a high throughput sequencing diagram of the TOMM34 mutant sequences.
FIG. 3 is a Sanger sequencing of the TOMM34 mutant sequences.
Detailed Description
The present invention is described in detail below with reference to the drawings and examples of the specification:
in order to make the objects, technical solutions and advantages of the embodiments of the present invention more clear, the technical solutions of the embodiments of the present invention will be clearly and completely described below. The specific conditions are not noted in the examples and are carried out according to conventional conditions or conditions recommended by the manufacturer. The reagents or apparatus used were conventional products commercially available without the manufacturer's attention.
The features and capabilities of the present invention are described in further detail below in connection with the examples.
Example 1
This example performed full exome high throughput sequencing of the family of patients with multiple infant lethal mitochondrial disease (lethal infantile mitochondrial disease, LIMD), comprising the following steps in sequence:
(1) Sample collection and extraction of genomic DNA.
Clinical data of family members and blood samples (EDTA anticoagulation) were collected, and the samples were blood samples sent to the furi medical test laboratory company, inc.
Blood genomic DNA of each member of the family was extracted according to the instructions of the Blood DNA extraction Kit (Magen, hiPure Blood & Tissue DNA Kit). The purity of the DNA was measured using Nanodrop one, the OD260nm/OD280nm of the obtained genomic DNA was between 1.7 and 2.0, and the concentration of the DNA was measured using Nanodrop one, and the concentration of the obtained genomic DNA was 50 to 100 ng/. Mu.L, and the total amount was 5 to 10. Mu.g. Placing at-20deg.C for preservation.
(2) Exome sequencing and bioinformatics analysis.
To find other pathogenic genes of LIMD, we screened 1 LIMD family for potential genetic variation using exome sequencing (family diagram see fig. 1), whereas no pathological variation was found from the prior known LIMD pathogenic gene detection.
Exome sequencing was performed in pre-evidence individuals. Briefly, genomic DNA was fragmented and subjected to enzymatic sectioning, end repair, 3' end addition a, linker ligation, and PCR amplification by using KAPA company kit (KAPA HyperPlus Library Preparation Kit); the exon regions were captured using the IGT library construction kit (xGen Exome Research Panel v 2). The library was sequenced (sequencing depth 150X) on a Novaseq sequencer (Illumina, san diego, CA, usa). The NGS sequencing results were aligned to human reference genome UCSC NCBI37/hg19 using Novocraft NovoAlign to obtain a unique alignment to the genome. Variation of the target region was determined using VarScan mp 2snp and VarScan mp 2 index assays. The Remove Run Common Variants and Remove Global Common Variants software was used to remove common variations in dbSNP and ExAC databases. The variation was then annotated with Interactive Biosoftware Alamut Batch. The database used for annotation includes: dbSNP, exAC, 1000g, clinVar, OMIM, etc. Annotated variations were ranked according to High, medium, low using a filteralamout. In the High and Medium packets, a variance is given a priority value and a ranking reason. All variations are initially in the Low group, and when one variation meets certain criteria, it may be classified as a higher level variation. And utilizing FATHMM, FATHMMMKL, METALR, METASVM, MUTATIONASSESSOR, MUTATIONTASTERAGVGD, AGVGD, LRT, PROVEAN, SIFT and REVEL software to predict SNP function.
After sequencing the whole exons and bioinformatics analysis of the 1 LIMD family TOMM34 genes in FIG. 1, we found that the forensics carry 2 complex heterozygous mutations, the BAM file of mutation sequencing results is shown by referring to FIG. 2, the gene code of the TOMM34 genes in Ensemble database (www.ensembl.org) is ENSG00000025772, the mutation c.284T > A is carried out, and the 43583804 base of the chromosome 20 is mutated from A to T; RNA level: the 285 th base of the coding RNA of the TOMM34 gene is mutated from T to A; protein level: the 95 th tyrosine of the TOMM34 gene encoding protein is mutated into a stop codon; another mutation, c.169c > T, was mutated from G to a at the 43585085 base of chromosome 20; RNA level: the 169 th base of the coding RNA of the TOMM34 gene is mutated from C to T; protein level: the 57 th arginine of the TOMM34 gene encoding protein is mutated to a stop codon. No mutation sites of other suspected pathogenic genes were found.
The mutation of the TOMM34 gene, chr20 (GRCh 37): g.43583804A > T, chr (GRCh 37): g.43585505G > A, belongs to null mutation (null mutation), and results in complete loss of function of the precursor TOMM34 protein and serious influence on physiological function of the TOMM34 protein. According to the known biological function results, the clinical symptoms of the prior LIMD are highly consistent.
According to the designed screening procedure, by means of high-throughput deep sequencing and bioinformatics analysis, we successfully found that TOMM34 gene is LIMD new pathogenic gene, mutant Chr20 (GRCh 37): g.43583804A > T, chr (GRCh 37): g.43585585G > A is new pathogenic site of the disease.
Example 2TOMM34 mutant gene detection primers and Sanger sequencing kit were set up.
For TOMM34 mutant gene sequences (c.284T > a, c.169c > T). Primer 3 Primer design software is adopted to design Primer sequences SEQ ID NO. 3-SEQ ID NO.6, and the Primer sequences amplify genome DNA fragments containing TOMM34 gene mutation sites.
Specific PCR amplification systems (20. Mu.l) included: PCR 2 Xbuffer mix 10. Mu.l, forward primer (10. Mu. Mol) 1. Mu.l, reverse primer (10. Mu. Mol) 1. Mu.l corresponding to the forward primer, ddH 2 O6. Mu.l, DNA 2. Mu.l. PCR reaction procedure: 95 ℃ for 10min;95℃30s,64℃30s,72℃30s (35 cycles); 72 ℃ for 8min; preserving at 4 ℃. After the PCR amplification is finished, 1% agarose gel electrophoresis is adopted for detection, and gel of a PCR product is recovered by cutting gel. All PCR products were sequenced with forward and reverse primers, respectively.
The sequencing result is shown by referring to FIG. 3, 2 heterozygous mutant capillary electrophoresis peaks, namely an A/T heterozygous peak and a G/A heterozygous peak, are detected in the TOMM34 gene of a patient by utilizing the TOMM34 mutant gene Sanger sequencing kit, and the peak shape is standard and clear, so that the TOMM34 mutant gene Sanger sequencing kit can be used for molecular detection of the TOMM34 gene related LIMD.
In summary, the mutant TOMM34 gene identified by the present invention can be used for early clinical screening of LIMD patients, and the above description is only a preferred embodiment of the present invention, and is not intended to limit the present invention, so that various modifications and variations will be apparent to those skilled in the art. Any modification, equivalent replacement, improvement, etc. made within the spirit and principle of the present invention should be included in the protection scope of the present invention.
Claims (8)
1. A mutant TOMM34 gene, characterized in that: the mutant TOMM34 gene has at least one of the following mutations compared to the human genomic reference sequence GRCh 37:
the base of the physical position 43583804 of the chromosome 20 is mutated from A to T, and the base of the physical position 43585085 of the chromosome 20 is mutated from G to A;
the cDNA sequence of the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 1:
c.285T>A、c.169C>T;
the sequence of the mutant TOMM34 protein corresponding to the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 2:
p.Tyr95Ter、p.Arg57Ter。
2. a method of detecting the mutant TOMM34 gene of claim 1 for non-diagnostic purposes, wherein: the method comprises detecting the presence or absence of a mutation site in the TOMM34 gene; the mutation site is at least one of the following:
chr20 (GRCh 37) g.43583804A > T, cDNA sequence c.284T > A, p.Tyr95ter;
chr20 (GRCh 37): g.435855085G > A, cDNA sequence generation c.169C > T, p.Arg57Ter.
3. The method of claim 2, wherein: the method comprises the step of PCR amplification by using at least one set of primers:
TOMM34_E3Fseq:ACGCTGAGTGCTCCAGATAACC,
TOMM34_E3R:GCTGCTTGGGCTTGTGTCTTAT;
TOMM34_E2F1:CTTGAGCCTCTGCGATTCCTGA,
TOMM34_E2R1seq:GCCTGCTTCTAACTGCCCATCC。
4. a method as claimed in claim 3, wherein: the PCR amplification reaction procedure includes: 95 ℃ for 10min; cycling for 35 times at 95 ℃ for 30s,64 ℃ for 30s and 72 ℃ for 30 s; and at 72℃for 8min.
5. A reagent for detecting a mutant TOMM34 gene, characterized in that: the reagent is a nucleic acid detection probe or primer;
the nucleic acid detection probe is complementary to the mutant TOMM34 gene; the mutant TOMM34 gene has at least one of the following mutations compared to the human genomic reference sequence GRCh 37:
the base of the physical position 43583804 of the chromosome 20 is mutated from A to T, and the base of the physical position 43585085 of the chromosome 20 is mutated from G to A;
the cDNA sequence of the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 1:
c.285T>A、c.169C>T;
the region of the nucleic acid detection probe complementary to the mutant TOMM34 gene comprises a physical position or cDNA sequence position selected from at least one of:
the physical position is 43583804 th position of chromosome 20 and 43585085 th position of chromosome 20; 285 th and 169 th cDNA sequence;
the primer is at least one group of primers with the following sequences:
TOMM34_E3Fseq:ACGCTGAGTGCTCCAGATAACC,
TOMM34_E3R:GCTGCTTGGGCTTGTGTCTTAT;
TOMM34_E2F1:CTTGAGCCTCTGCGATTCCTGA,
TOMM34_E2R1seq:GCCTGCTTCTAACTGCCCATCC。
6. a kit for detecting a mutant TOMM34 gene, comprising: comprising the reagent according to claim 5.
7. Application of a reagent for detecting mutant TOMM34 gene in preparing a reagent for detecting lethal mitochondrial diseases of infants;
the mutant TOMM34 gene has at least one of the following mutations compared to the human genomic reference sequence GRCh 37:
the base of the physical position 43583804 of the chromosome 20 is mutated from A to T, and the base of the physical position 43585085 of the chromosome 20 is mutated from G to A;
the cDNA sequence of the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 1:
c.285T>A、c.169C>T;
the sequence of the mutant TOMM34 protein corresponding to the mutant TOMM34 gene has at least one of the following mutations compared with the sequence of SEQ ID NO. 2:
p.Tyr95Ter、p.Arg57Ter。
8. the use according to claim 7, characterized in that: the reagent for detecting the infant lethal mitochondrial disease is a reagent for a gene chip, a reagent for DNA amplification, a reagent for a restriction enzyme digestion method or a reagent for sequencing.
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