CN116693607A - Antibacterial polypeptide, application, bacterial growth inhibitor, anti-infective drug or health care product - Google Patents

Antibacterial polypeptide, application, bacterial growth inhibitor, anti-infective drug or health care product Download PDF

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Publication number
CN116693607A
CN116693607A CN202210173682.0A CN202210173682A CN116693607A CN 116693607 A CN116693607 A CN 116693607A CN 202210173682 A CN202210173682 A CN 202210173682A CN 116693607 A CN116693607 A CN 116693607A
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polypeptide
staphylococcus aureus
escherichia coli
yplgqgsfrp
growth inhibitor
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靳艳
于洋
于文皓
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Dalian Institute of Chemical Physics of CAS
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Dalian Institute of Chemical Physics of CAS
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/04Linear peptides containing only normal peptide links
    • C07K7/06Linear peptides containing only normal peptide links having 5 to 11 amino acids
    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23LFOODS, FOODSTUFFS, OR NON-ALCOHOLIC BEVERAGES, NOT COVERED BY SUBCLASSES A21D OR A23B-A23J; THEIR PREPARATION OR TREATMENT, e.g. COOKING, MODIFICATION OF NUTRITIVE QUALITIES, PHYSICAL TREATMENT; PRESERVATION OF FOODS OR FOODSTUFFS, IN GENERAL
    • A23L33/00Modifying nutritive qualities of foods; Dietetic products; Preparation or treatment thereof
    • A23L33/10Modifying nutritive qualities of foods; Dietetic products; Preparation or treatment thereof using additives
    • A23L33/17Amino acids, peptides or proteins
    • A23L33/18Peptides; Protein hydrolysates
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04Antibacterial agents
    • AHUMAN NECESSITIES
    • A23FOODS OR FOODSTUFFS; TREATMENT THEREOF, NOT COVERED BY OTHER CLASSES
    • A23VINDEXING SCHEME RELATING TO FOODS, FOODSTUFFS OR NON-ALCOHOLIC BEVERAGES AND LACTIC OR PROPIONIC ACID BACTERIA USED IN FOODSTUFFS OR FOOD PREPARATION
    • A23V2002/00Food compositions, function of food ingredients or processes for food or foodstuffs
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

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  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Medicinal Chemistry (AREA)
  • Oncology (AREA)
  • Animal Behavior & Ethology (AREA)
  • Biophysics (AREA)
  • Communicable Diseases (AREA)
  • Biochemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Pharmacology & Pharmacy (AREA)
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  • Engineering & Computer Science (AREA)
  • Food Science & Technology (AREA)
  • Polymers & Plastics (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
  • Peptides Or Proteins (AREA)

Abstract

The present invention relates to a polypeptide derived from Daqu and having inhibitory activity against gram-negative bacteria and gram-positive bacteria typified by Escherichia coli and Staphylococcus aureus. The amino acid sequence is Tyr-Pro-Leu-Gly-Gln-Gly-Ser-Phe-Arg-Pro. The polypeptide YPLGQGSFRP has good inhibitory activity on gram-negative bacteria and gram-positive bacteria, and has good application prospect in preparing medicines and/or health products for preventing and/or reducing intestinal tract infection diseases caused by escherichia coli and staphylococcus aureus as a natural and safe antibacterial agent.

Description

Antibacterial polypeptide, application, bacterial growth inhibitor, anti-infective drug or health care product
Technical Field
The invention relates to an antibacterial polypeptide YPLGQGSFRP derived from Daqu and application thereof in preparing a bacterial growth inhibitor, an anti-infective drug and/or a health care product.
Background
Antibiotics are special secondary metabolic organic substances produced by microorganisms, and can inhibit the growth and metabolism of bacteria by inhibiting the formation of nucleic acids of bacteria, inhibiting the synthesis of bacterial proteins, changing the permeability of cell membranes of bacteria, interfering the synthesis of cell walls of bacteria and the like when used at low concentration. Antibiotics are widely used because of their remarkable antibacterial effect, however, overuse also results in the generation of bacterial resistance, making the treatment of bacterial infectious diseases increasingly difficult.
The antibacterial peptide (antimicrobial peptides, AMPs) is used as a novel antibiotic, has very wide sources, and has the characteristics of 10-50 amino acids, strong cationic property, amphipathy, broad-spectrum antibacterial property and the like. Compared with the traditional antibiotics, the antibacterial peptide has the following greatest advantages: the antibacterial peptide is mainly combined to a bacterial cell membrane through electrostatic attraction, and is combined with phospholipid to be inserted into a cytoplasmic membrane through hydrophobic action, so that the structure of the bacterial cell membrane is destroyed. The external force action can not cause the microorganism to generate drug resistance basically. However, the current use of antimicrobial peptides still faces two major challenges: firstly, the antibacterial activity of the natural antibacterial peptide is relatively low, and secondly, the stability and cytotoxicity of the antibacterial peptide are difficult to regulate and control. Thus, the method is applicable to a variety of applications. The development of safe, stable and low-cytotoxicity antibacterial peptide has important significance.
The Daqu is prepared by fermenting grains serving as substrates at high temperature by microorganisms, wherein the antibacterial peptide derived from the grain protein is food-borne, natural and safe, and has good potential as an antibacterial drug. Therefore, the antibacterial peptide derived from the Daqu substrate wheat protein is screened from Daqu, and can be used for preparing and researching medicines and/or health-care products for preventing and/or reducing intestinal tract infection diseases caused by escherichia coli and staphylococcus aureus.
Disclosure of Invention
The invention aims to provide an application of an antibacterial polypeptide YPLGQGSFRP derived from a Daqu substrate wheat protein in preparing medicines and/or health-care products for preventing and/or reducing intestinal tract infection diseases caused by escherichia coli and staphylococcus aureus.
To achieve the above object, the present invention uses the polypeptide YPLGQGSFRP as an active ingredient for inhibiting the growth activity of microorganisms.
It has the sequence table SEQ ID NO:1, the polypeptide YPLGQGSFRP is an active ingredient of the anti-escherichia coli and staphylococcus aureus medicament, and a pharmaceutically acceptable carrier or auxiliary material can be added.
The polypeptide compound YPLGQGSFRP with the inhibitory activity on escherichia coli and staphylococcus aureus has the amino acid sequence of Tyr-Pro-Leu-Gly-Gln-Gly-Ser-Phe-Arg-Pro. The molecular weight is 1121.24Da, white powder is easy to dissolve in water, and has strong inhibition effect on the growth of escherichia coli and staphylococcus aureus.
Compared with the prior art, the invention has the following beneficial effects:
the invention is obtained from Daqu and determines the structure of the polypeptide, verifies that the polypeptide has better antibacterial activity for the first time, and has good application prospect in preparing medicines and/or health care products for preventing and/or reducing intestinal tract infection diseases caused by escherichia coli and staphylococcus aureus.
Drawings
FIG. 1 is a diagram showing the results of inhibition by polypeptide YPLGQGSFRP, wherein FIG. 1 (A) is a diagram showing the results of an experiment for inhibiting E.coli by polypeptide YPLGQGSFRP; FIG. 1 (B) is a graph showing the experimental results of inhibition of Staphylococcus aureus by polypeptide YPLGQGSFRP.
Detailed Description
Example 1 preparation and identification of polypeptide YPLGQGSFRP
A method of combining LC-MS/MS with a bottom-up proteomics technique is adopted. The method is characterized in that commercially available Maotai-flavor high-temperature Daqu (RH-02, luzhou Ruihua biological starter propagation Co., ltd.) is used as a raw material, and peptide fragments with inhibition effect on escherichia coli and staphylococcus aureus are screened by combining structure-activity relationship characteristics through gradient extraction of water and ethanol, centrifugation, ultrafiltration and LC-MS/MS analysis.
The specific method comprises the following steps:
(1) Sample preparation
1g of the Daqu sample was mixed with 20mL of ultrapure water, centrifuged at 200rpm for 15min at 37℃and 4℃and 15000 Xg, the supernatant (designated as supernatant A) was removed, 20mL of 50% ethanol-water solution was added to the precipitate (designated as precipitate A), the mixture was centrifuged at 200rpm for 15min at 37℃and 4℃and 15000 Xg, the supernatant (designated as supernatant B) was removed, the precipitate (designated as precipitate B) was added to 20mL of ethanol, and the mixture was centrifuged at 200rpm for 15min at 37℃and 15000 Xg and 20mL of ethanol was added to the precipitate (designated as supernatant C). The supernatant A, B, C was ultrafiltered with an ultrafiltration membrane having a molecular weight cut-off of 10000Da, and the obtained filtrate A, B, C was desalted with a C18-SPE cartridge (Waters Oasis HLB SPE), respectively. After desalting, the samples were lyophilized and stored at-80 ℃ to obtain the corresponding lyophilized and stored samples A, B, C.
(2) LC-MS/MS analysis
Freeze-dried stored samples A, B, C were reconstituted in 0.1% (v/v) FA-H, respectively 2 In O solution, LTQ-Orbitrap Velos (double partial pressure linear trap and electrostatic field orbit trap combined high-resolution mass spectrum) is used for carrying out mass spectrum analysis on a sample. The loading amounts were 2. Mu.g, respectively, and the mobile phase A of the liquid chromatograph was an aqueous solution (v/v) containing 0.1% formic acid, and the mobile phase B was acetonitrile (v/v) containing 0.1% formic acid. The gradient elution procedure was as follows:
0-80min,7% -27% B (v/v); 80-95min,27% -40% B;95-97min, 40-90% B;97-107min,90% B;107-109min,90% -0% B;109-126min,0% B, flow rate 60. Mu.L/min
The mass spectrum ion source is ESI, the ion transmission temperature is 250 ℃, the spraying voltage is 2.2kV, the normalized collision energy is 35%, the primary spectrum resolution is 60000, the scanning range is 400-2000m/z, and the data acquisition mode is a data dependent mode (DDA). Selecting 20 strongest parent ions in the primary spectrum for secondary fragmentation, wherein dynamic exclusion is set as repeated counting, 2; repeating time, 30s; the exclusion time was 60 seconds.
(3) Data retrieval
RAW file use MaxQuant TM The (v.1.5.3.30) software was retrieved in the wheat (Wheat, 379 proteins) database (http:// www.uniprot.org /). The search parameters are as follows: no enzyme cleavage, maximum number of missed cleavage and fixed modification were set, and the variable modification was set to methionine oxidation (+ 15.9949 Da). The mass tolerance deviation of the parent ion was 20ppm and the fragment ion was 0.5Da. Controlling PSM false positive rate (FDR)<1% of the polypeptides were analyzed as valid data. 475 polypeptides from 39 proteins were identified in the experiment. Since antibacterial peptides generally have the following characteristics, such as generally containing hydrophobic amino acids, basic amino acids; has strong cationic property, amphipathy and the like. Thus, the knotThe structure-activity relationship of the synthetic antimicrobial peptides was used to screen out a portion of potential antimicrobial peptides from the identification results, as shown in table 1:
table 1 results of partial identification of potential antimicrobial peptides
(4) Analysis of polypeptide YPLGQGSFRP Properties
Polypeptide YPLGQGSFRP is derived from main storage protein of wheat seeds, namely alpha/beta gliadin (P02863, f 224-233) peptide isoelectric point is 8.75, and molecular mass is 1121.24Da. Biological information of the polypeptide obtained by an online tool ExpASY shows that the polypeptide has positive charges, an instability coefficient of 40.60, and an aliphatic amino acid index and hydrophilicity of 39.00 and-0.750 respectively.
Information of SEQ ID No.1
(a) Sequence characterization
* Length: 10 amino acids
* Type (2): amino acids
* Chain type: linear single strand
(b) Molecular type: proteins
Sequence description:
SEQ ID No.1
YPLGQGSFRP
EXAMPLE 2 detection of bacteriostatic Activity of polypeptide YPLGQGSFRP
Three potential antimicrobial peptides YPLGQGSFRP, IFWGIPALLK and AAFSPVSLHSALSLLAAGAGS were selected and delegated to the Nanj peptide biotechnology Co.Ltd, with purities of 95.46%, 99.73% and 95.31%, respectively, by solid phase synthesis. The antibacterial activity of three potential antibacterial peptides is examined by taking gram-positive bacteria escherichia coli and gram-negative bacteria staphylococcus aureus as target strains.
(1) Strain and resuscitation
Coli (Escherichia coli K) and staphylococcus aureus (Staphylococcus aureus) were both stored at-80 ℃ by glycerol storage. Before the experiment, one loop of escherichia coli is inoculated into 5mL of liquid LB medium, one loop of staphylococcus aureus is inoculated into 5mL of liquid TSB medium, and the strain is revived by culturing for 12 hours at 37 ℃ and 200 rpm.
After 12h, 100. Mu.L of E.coli bacterial liquid was transferred to 5mL of liquid LB medium, 100. Mu.L of Staphylococcus aureus bacterial liquid was transferred to 5mL of liquid TSB medium, and the mixture was again cultured at 37℃for 12h for resuscitation at 200 rpm. The resuscitating operation was repeated 2-3 times to revive the strain.
(2) Culture medium
The antibacterial experiment used a round petri dish with a diameter of 90 mm. The culture medium is LB solid culture medium and TSB solid culture medium, and the two culture media respectively contain agar with the mass concentration of 1.5%. LB solid medium was mixed to a final concentration of 1X 10 5 CFU/mL of E.coli, TSB solid medium was mixed to a final concentration of 1X 10 5 CFU/mL staphylococcus aureus. The culture medium mixed with the bacterial liquid is respectively poured into six different round culture dishes (the escherichia coli and the staphylococcus aureus are respectively poured into three culture dishes), the filling height of the culture medium in the culture dishes is 4mm, and the culture medium is preserved at 4 ℃ after being sealed, so that six flat plates are obtained.
(3) Antibacterial experiments
3 holes with the diameter of 3mm are respectively manufactured on six flat plates, and the hole spacing is 3cm. Six plates were divided into three groups, one plate containing E.coli and one plate containing Staphylococcus aureus were grouped, and 1.5mg of the same target peptide dissolved in 50. Mu.L of sterile water was added to each of two wells in each group (three target peptides, three groups of experiments), each of which was performed in duplicate. A third well was blank with sterile water and 50. Mu.L was added as well. Standing the plate after sample addition in a refrigerator at 4 ℃ for 4 hours, taking out the plate after the sample liquid in the hole is completely absorbed and diffused, culturing the plate for 12 hours in an inverted mode in a constant-temperature incubator at 37 ℃, and observing and measuring and recording the size of a bacteriostasis zone.
(4) Experimental results
The diameters of the inhibition zones of the three target peptides on escherichia coli and staphylococcus aureus are shown in table 2. The polypeptides IFWGIPALLK and AAFSPVSLHSALSLLAAGAGS have no inhibition effect on escherichia coli and only have weak inhibition effect on staphylococcus aureus; YPLGQGSFRP has inhibiting effect on Escherichia coli and Staphylococcus aureus, and has slightly better inhibiting effect on Escherichia coli than Staphylococcus aureus. The results indicate that polypeptide YPLGQGSFRP has inhibitory activity against both gram-negative and gram-positive bacteria and has higher inhibitory activity against gram-negative bacteria.
Figure 1 shows the inhibitory effect of polypeptide YPLGQGSFRP on escherichia coli and staphylococcus aureus.
Table 2 bacteriostatic effects of polypeptide YPLGQGSFRP
Sequence listing
<110> institute of chemical and physical of Dalian of academy of sciences of China
<120> antibacterial polypeptide, application, bacterial growth inhibitor, anti-infective drug or health care product
<160> 1
<170> SIPOSequenceListing 1.0
<210> 1
<211> 10
<212> PRT
<213> Artificial sequence (Artificial Sequence)
<400> 1
Tyr Pro Leu Gly Gln Gly Ser Phe Arg Pro
1 5 10

Claims (8)

1. An antimicrobial polypeptide, characterized in that: the polypeptide is YPLGQGSFRP and has a sequence table SEQ ID NO:1, an amino acid sequence in seq id no; the amino acid sequence of the polypeptide is Tyr-Pro-Leu-Gly-Gln-Gly-Ser-Phe-Arg-Pro.
2. Use of the polypeptide of claim 1 for the preparation of a growth inhibitor for escherichia coli and/or staphylococcus aureus.
3. Use of a polypeptide according to claim 1 for the preparation of a medicament and/or health care product for the prevention and/or treatment of a disease of intestinal bacterial infection caused by escherichia coli and/or staphylococcus aureus.
4. A use according to claim 2 or 3, characterized in that: the polypeptide YPLGQGSFRP is taken as an active ingredient, and a pharmaceutically or food acceptable carrier or auxiliary material can be added.
5. An escherichia coli and/or staphylococcus aureus growth inhibitor, characterized by: which comprises the polypeptide of claim 1 as an active ingredient.
6. The growth inhibitor for escherichia coli and/or staphylococcus aureus according to claim 5, wherein: the polypeptide of claim 1 is used as an active ingredient, wherein a pharmaceutically or food acceptable carrier or auxiliary material can be added.
7. A medicine and/or health care product for preventing and/or treating intestinal bacterial infection diseases caused by escherichia coli and/or staphylococcus aureus is characterized in that: which comprises the polypeptide of claim 1 as an active ingredient.
8. The pharmaceutical and/or nutraceutical product according to claim 7, characterized in that: the polypeptide of claim 1 is used as an active ingredient, wherein a pharmaceutically or food acceptable carrier or auxiliary material can be added.
CN202210173682.0A 2022-02-24 2022-02-24 Antibacterial polypeptide, application, bacterial growth inhibitor, anti-infective drug or health care product Pending CN116693607A (en)

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CN116693607A true CN116693607A (en) 2023-09-05

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