CN116676358A - Preparation method of 2-fluoro-2-deoxyuridine - Google Patents

Preparation method of 2-fluoro-2-deoxyuridine Download PDF

Info

Publication number
CN116676358A
CN116676358A CN202310899885.2A CN202310899885A CN116676358A CN 116676358 A CN116676358 A CN 116676358A CN 202310899885 A CN202310899885 A CN 202310899885A CN 116676358 A CN116676358 A CN 116676358A
Authority
CN
China
Prior art keywords
fluoro
enzyme
deoxyuridine
reaction
preparation
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CN202310899885.2A
Other languages
Chinese (zh)
Inventor
姚红
罗瑾
蒋贤波
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Hangzhou Huangsen Biological Technology Co ltd
Original Assignee
Hangzhou Huangsen Biological Technology Co ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Hangzhou Huangsen Biological Technology Co ltd filed Critical Hangzhou Huangsen Biological Technology Co ltd
Priority to CN202310899885.2A priority Critical patent/CN116676358A/en
Publication of CN116676358A publication Critical patent/CN116676358A/en
Pending legal-status Critical Current

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P19/00Preparation of compounds containing saccharide radicals
    • C12P19/26Preparation of nitrogen-containing carbohydrates
    • C12P19/28N-glycosides
    • C12P19/38Nucleosides
    • C12P19/385Pyrimidine nucleosides
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02PCLIMATE CHANGE MITIGATION TECHNOLOGIES IN THE PRODUCTION OR PROCESSING OF GOODS
    • Y02P20/00Technologies relating to chemical industry
    • Y02P20/50Improvements relating to the production of bulk chemicals
    • Y02P20/55Design of synthesis routes, e.g. reducing the use of auxiliary or protecting groups

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Microbiology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Saccharide Compounds (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

The application relates to the technical field of organic synthesis, in particular to a preparation method of 2-fluoro-2-deoxyuridine. The application provides a preparation method of 2-fluoro-2 deoxyuridine, which comprises the following steps: mixing 2-fluoro-2-deoxycytidine, biological enzyme and polar solvent for enzyme catalytic reaction to obtain 2-fluoro-2-deoxyuridine. The preparation method provided by the application does not need to use high-toxicity acid reagents such as hydrofluoric acid and the like, and prepares the 2-fluoro-2-deoxyuridine through enzyme catalysis, so that the generation of fluorine-containing wastewater or acid wastewater is avoided, the safety of the preparation process is ensured, and the problem of environmental pollution is avoided. In addition, the preparation method provided by the application has high biological enzyme catalytic conversion rate and high yield.

Description

Preparation method of 2-fluoro-2-deoxyuridine
Technical Field
The application relates to the technical field of organic synthesis, in particular to a preparation method of 2-fluoro-2-deoxyuridine.
Background
2-fluoro-2-deoxyuridine is a key intermediate for preparing chronic hepatitis C drug sofosbuvir. Sofosbuvir is the first drug to safely and effectively treat certain types of hepatitis C without combining interferon, and has the following structural formula:
the 2-fluoro-2-deoxyuridine is used as a key intermediate of sofosbuvir, the intermediate can be used for preparing 2,2 '-dehydrated uridine from uridine, and then the 2,2' -dehydrated uridine is subjected to ring opening by using reagents such as hydrofluoric acid, pyridine hydrofluoric acid complex, triethylamine hydrofluoric acid complex, potassium fluoride and the like to prepare the 2-fluoro-2-deoxyuridine, wherein the specific synthetic route is shown in a formula A.
The 2-fluoro-2-deoxyuridine can also be prepared into 2,2' -dehydrated uridine by taking uridine as a raw material, then sequentially carrying out hydroxyl protection reaction and ring-opening reaction at the second position to prepare a hydroxyl compound, and then carrying out fluorination deprotection on the hydroxyl compound to obtain the target compound 2-fluoro-2-deoxyuridine, wherein the specific synthetic route is shown in a formula B.
However, both the preparation methods need to be carried out in an acidic environment, the reaction conditions are harsh, and a large amount of acidic wastewater which is difficult to treat is produced.
Disclosure of Invention
In view of this, the present application provides a method for preparing 2-fluoro-2-deoxyuridine. The application only uses 2-fluoro-2-deoxycytidine to carry out enzyme catalytic reaction in the presence of biological enzyme and polar solvent, thus obtaining 2-fluoro-2-deoxyuridine without using high toxic acid reagents such as hydrofluoric acid and the like and generating acid wastewater.
In order to achieve the above object, the present application provides the following technical solutions:
a method for preparing 2-fluoro-2 deoxyuridine, comprising the following steps:
mixing 2-fluoro-2-deoxycytidine, biological enzyme and polar solvent for enzyme catalytic reaction to obtain 2-fluoro-2-deoxyuridine.
Preferably, the polar solvent comprises purified water, N dimethylaniline, N-dimethylformamide, dimethylsulfoxide, N-methylpyrrolidone, acetonitrile, tetrahydrofuran or acetone.
Preferably, the biological enzyme comprises one or more of kanamycin deaminase, aspergillus oryzae deaminase and bleomycin deaminase.
Preferably, the mass ratio of the 2-fluoro-2-deoxycytidine to the biological enzyme is 1:0.001-0.01.
Preferably, the mass-volume ratio of the 2-fluoro-2-deoxycytidine to the polar solvent is 1:3-30.
Preferably, the reaction temperature of the enzyme catalytic reaction is 10-40 ℃ and the time is 20-48 h.
Preferably, the pH value of the reaction solution of the enzyme catalytic reaction is 7.2-8.0.
Preferably, the pH value of the reaction solution of the enzyme-catalyzed reaction is adjusted by a buffer solution.
Preferably, the solute in the buffer solution comprises one or more of potassium dihydrogen phosphate, sodium dihydrogen phosphate, dipotassium hydrogen phosphate, disodium hydrogen phosphate, tris and sodium phosphate.
Preferably, after the enzyme-catalyzed reaction, the method further comprises the step of carrying out recrystallization and purification treatment on the enzyme-catalyzed reaction product.
The application provides a preparation method of 2-fluoro-2 deoxyuridine, which comprises the following steps: 2-fluoro-2-deoxycytidine, biological enzyme and polar solvent are mixed for enzyme catalytic reaction to prepare the 2-fluoro-2-deoxyuridine. The preparation method provided by the application does not need to use high-toxicity acid reagents such as hydrofluoric acid and the like, and prepares the 2-fluoro-2-deoxyuridine through enzyme catalysis, so that the generation of fluorine-containing wastewater or acid wastewater is avoided, the safety of the preparation process is ensured, and the problem of environmental pollution is avoided. In addition, the preparation method provided by the application has high biological enzyme catalytic conversion rate and high yield.
Detailed Description
The application provides a preparation method of 2-fluoro-2 deoxyuridine, which comprises the following steps:
mixing 2-fluoro-2-deoxycytidine, biological enzyme and polar solvent for enzyme catalytic reaction to obtain 2-fluoro-2-deoxyuridine.
In the present application, the desired materials are commercially available products well known to those skilled in the art unless specified otherwise.
In the present application, the polar solvent preferably includes water, N-dimethylaniline, N-dimethylformamide, dimethylsulfoxide, N-methylpyrrolidone, acetonitrile, tetrahydrofuran or acetone, and more preferably water.
In the present application, the biological enzyme preferably includes one or more of kanamycin deaminase, aspergillus oryzae deaminase and bleomycin deaminase, more preferably kanamycin deaminase.
In the present application, the mass ratio of the 2-fluoro-2-deoxycytidine to the biological enzyme is preferably 1:0.001-0.01, and more preferably 1:0.005; the mass-volume ratio of the 2-fluoro-2-deoxycytidine to the polar solvent is preferably 1:3-30, and more preferably 1:15.
In the present application, the reaction temperature of the enzyme-catalyzed reaction is preferably 10 to 40 ℃, more preferably 30 ℃, and the time is preferably 20 to 48 hours, more preferably 25 hours. In the present application, the pH of the reaction solution of the enzyme-catalyzed reaction is preferably 7.2 to 8.0, more preferably 7.5, and the pH of the reaction solution of the enzyme-catalyzed reaction is preferably adjusted by a buffer solution, and the solute in the buffer solution preferably comprises one or more of potassium dihydrogen phosphate, sodium dihydrogen phosphate, dipotassium hydrogen phosphate, disodium hydrogen phosphate, tris (hydroxymethyl) aminomethane and sodium phosphate, more preferably a mixed buffer salt of dipotassium hydrogen phosphate and tris (hydroxymethyl) aminomethane. In the specific embodiment of the application, preferably, the 2-fluoro-2-deoxycytidine, the polar solvent and the buffer salt are mixed to obtain a reaction system, the pH value of the reaction system is regulated to 7.2-8.0 by the buffer salt, and then biological enzyme is added for enzyme catalytic reaction to obtain the 2-fluoro-2-deoxyuridine.
In the present application, the enzymatic reaction has the following reaction formula:
after the enzyme catalytic reaction, the application preferably further comprises the step of carrying out recrystallization and purification treatment on the enzyme catalytic reaction product; in a specific embodiment of the present application, the recrystallization purification treatment preferably includes the steps of: and (3) steaming the enzyme catalytic reaction product in a rotary way, dissolving the obtained residue in a first recrystallization solvent, filtering to obtain filtrate, adding a second recrystallization solvent into the filtrate under a heating state, cooling, crystallizing and filtering in sequence, flushing a filter cake with a third recrystallization solvent, and drying the flushed filter cake to obtain the 2-fluoro-2-deoxyuridine. In the present application, the temperature in the heated state is preferably 40 to 50 ℃, and more preferably 45 ℃; the temperature of the cooling crystallization is preferably 0 to 10 ℃, and more preferably 0 ℃.
In the present application, the first, second and third recrystallization solvents independently preferably include at least one or more of purified water, methanol, ethanol, methylene chloride and acetone, the first recrystallization solvent is more preferably methanol, the second recrystallization solvent is more preferably methylene chloride, the third recrystallization solvent is more preferably a mixed solution of methanol and methylene chloride, and the volume ratio of methanol and methylene chloride in the mixed solution is preferably 1:1 to 3, more preferably 1:2.
The following description of the technical solutions in the embodiments of the present application will be clear and complete, and it is obvious that the described embodiments are only some embodiments of the present application, but not all embodiments. All other embodiments, which can be made by those skilled in the art based on the embodiments of the application without making any inventive effort, are intended to be within the scope of the application.
Example 1
10g of 2-fluoro-2-deoxyuridine, 10mL of 0.1mol/L of tris aqueous solution and 5mL of 0.1mol/L of dipotassium hydrogen phosphate aqueous solution are added into a 250mL three-necked flask to obtain a reaction system, the pH value=7.5 of the reaction system is regulated by using the 0.1mol/L of potassium dihydrogen phosphate aqueous solution, 50mg of kanamycin deaminase is added, the reaction is carried out for 25 hours at 30 ℃, the conversion of 2-fluoro-2-deoxyuridine is monitored by HPLC, the enzyme catalytic reaction product is distilled to remove the solvent, the residue is dissolved in 100mL of methanol, the filtration is carried out, insoluble inorganic salt and insoluble enzyme protein after wall breaking are filtered, the filtrate is heated to 45 ℃, 200mL of dichloromethane is dripped, the temperature is reduced to 0-10 ℃ for crystallization, the filtration is carried out, the filter cake is dried by using cold methanol/dichloromethane mixed solution (volume ratio is 1:2), 9.63 g of white solid is obtained, the white solid is 2-fluoro-2-deoxyuridine, and the yield of 2-fluoro-2-deoxyuridine is 96%.
Example 2
10g of 2-fluoro-2-deoxyuridine, 10mL of 0.1mol/L of tris (hydroxymethyl) aminomethane aqueous solution and 5mL of 0.1mol/L of dipotassium hydrogen phosphate aqueous solution are added into a 250mL three-port bottle to obtain a reaction system, the pH=7.5 of the reaction system is regulated by 0.1mol/L of potassium dihydrogen phosphate aqueous solution, 50mg of Aspergillus oryzae deaminase is added, the reaction is carried out at 30 ℃ for 25 hours, the conversion of 2-fluoro-2-deoxyuridine is monitored by HPLC, the reaction time is prolonged to 48 hours, the conversion is monitored by HPLC to about 92%, the reaction time is prolonged to 72 hours, the conversion rate is not changed obviously, the enzyme catalytic reaction product is distilled to remove a solvent, the residue is dissolved in 100mL of methanol, the filtration is carried out, insoluble inorganic salt and insoluble enzyme protein after filtration, the filtrate is heated to 45 ℃, 200mL of dichloromethane is dripped, the temperature is reduced to 0-10 ℃, the wall breaking crystallization is carried out, the filtration is carried out, the filter cake is mixed with cold methanol/dichloromethane mixed solution (volume ratio is 1:2), the filter cake is leached into a mixed solvent (volume ratio is 1:2) and the white solid (2:2) is dehydrated into the white solid, the yield is about 12-2-fluorouridine, the white solid is obtained, and the white solid is dried.
Example 3
10g of 2-fluoro-2-deoxyuridine, 10mL of 0.1mol/L of an aqueous solution of tris (hydroxymethyl) aminomethane and 5mL of 0.1mol/L of an aqueous solution of dipotassium hydrogenphosphate were added to a 250mL three-necked flask to obtain a reaction system, the pH=7.5 of the reaction system was adjusted with 0.1mol/L of an aqueous solution of potassium dihydrogenphosphate, 50mg of kanamycin deaminase was added, the reaction was carried out at 30℃for 25 hours, the HPLC was monitored to convert about 80%, and the reaction time was prolonged to 72 hours without significant change in conversion.
Comparative example 1
10g of 2-fluoro-2-deoxyuridine, 10mL of 0.1mol/L of tris (hydroxymethyl) aminomethane aqueous solution and 5mL of 0.1mol/L of dipotassium hydrogen phosphate aqueous solution are added into a 250mL three-necked flask to obtain a reaction system, the pH=7.5 of the reaction system is regulated by using the 0.1mol/L of potassium dihydrogen phosphate aqueous solution, 50mg of trichoderma asperellum deaminase is added, the temperature is kept at 30 ℃ for reaction for 25 hours, HPLC (high performance liquid chromatography) monitoring is carried out for about 5 percent conversion, the reaction time is prolonged to 72 hours, and the conversion rate is not changed obviously.
Comparative example 2
10g of 2-fluoro-2-deoxyuridine, 10mL of 0.1mol/L of an aqueous solution of tris (hydroxymethyl) aminomethane and 5mL of 0.1mol/L of an aqueous solution of dipotassium hydrogenphosphate were added to a 250mL three-necked flask to obtain a reaction system, the pH=9.0 of the reaction system was adjusted by using the 0.1mol/L aqueous solution of potassium dihydrogenphosphate, 50mg of kanamycin deaminase was added, the reaction was carried out at 30℃for 25 hours, the HPLC was monitored to convert about 3%, the product was extremely small, the reaction time was prolonged to 72 hours, and the conversion rate was not significantly changed.
The foregoing is merely a preferred embodiment of the present application and it should be noted that modifications and adaptations to those skilled in the art may be made without departing from the principles of the present application, which are intended to be comprehended within the scope of the present application.

Claims (10)

1. The preparation method of the 2-fluoro-2 deoxyuridine is characterized by comprising the following steps:
mixing 2-fluoro-2-deoxycytidine, biological enzyme and polar solvent for enzyme catalytic reaction to obtain the 2-fluoro-2-deoxyuridine.
2. The method according to claim 1, wherein the polar solvent comprises water, N dimethylaniline, N-dimethylformamide, dimethylsulfoxide, N-methylpyrrolidone, acetonitrile, tetrahydrofuran or acetone.
3. The method of claim 1, wherein the biological enzyme comprises one or more of kanamycin deaminase, aspergillus oryzae deaminase, and bleomycin deaminase.
4. The method according to claim 1 or 3, wherein the mass ratio of the 2-fluoro-2-deoxycytidine to the biological enzyme is 1:0.001-0.01.
5. The preparation method according to claim 1 or 2, wherein the mass-volume ratio of the 2-fluoro-2-deoxycytidine to the polar solvent is 1:3-30.
6. The method according to claim 1, wherein the reaction temperature of the enzyme-catalyzed reaction is 10 to 40 ℃ and the time is 20 to 48 hours.
7. The method according to claim 1, wherein the pH of the reaction solution of the enzyme-catalyzed reaction is 7.2 to 8.0.
8. The method according to claim 1 or 7, wherein the pH of the reaction solution of the enzyme-catalyzed reaction is adjusted by a buffer solution.
9. The method of claim 8, wherein the solute in the buffer solution comprises one or more of potassium dihydrogen phosphate, sodium dihydrogen phosphate, dipotassium hydrogen phosphate, disodium hydrogen phosphate, tris and sodium phosphate.
10. The method according to claim 1, further comprising subjecting the enzyme-catalyzed reaction product to a recrystallization purification treatment after the enzyme-catalyzed reaction.
CN202310899885.2A 2023-07-20 2023-07-20 Preparation method of 2-fluoro-2-deoxyuridine Pending CN116676358A (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN202310899885.2A CN116676358A (en) 2023-07-20 2023-07-20 Preparation method of 2-fluoro-2-deoxyuridine

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN202310899885.2A CN116676358A (en) 2023-07-20 2023-07-20 Preparation method of 2-fluoro-2-deoxyuridine

Publications (1)

Publication Number Publication Date
CN116676358A true CN116676358A (en) 2023-09-01

Family

ID=87781259

Family Applications (1)

Application Number Title Priority Date Filing Date
CN202310899885.2A Pending CN116676358A (en) 2023-07-20 2023-07-20 Preparation method of 2-fluoro-2-deoxyuridine

Country Status (1)

Country Link
CN (1) CN116676358A (en)

Similar Documents

Publication Publication Date Title
US4625020A (en) Nucleoside process
DE2628202A1 (en) PROCESS FOR THE PREPARATION OF 2'-SUBSTITUTE-D-RIBOFURANOSYLPURINE DERIVATIVES
US3870700A (en) 2-halogeno-2-deoxy-5-(substituted)uridines
DE1620643A1 (en) Process for the preparation of new dinucleoside phosphates
CN116676358A (en) Preparation method of 2-fluoro-2-deoxyuridine
US2665274A (en) Steroid pyridinium salts
CN1107856A (en) Process for large-scale preparation of 2',3'-didehydro-2',3'-dideoxynucleosides
CH515249A (en) 2 5-and 3 5-dinucleoside phosphates
US20020188116A1 (en) Chemical synthesis of S-adenosyl-L-methionine with enrichment of ( S,S)-isomer
Uesugi et al. Improved Synthesis of 2′-Fluoro-2′-Deoxyadenosine and Synthesis and Carbon-13 NMR Spectrum of Its 3′, 5′-Cyclic Phosphate Derivative1
US3472837A (en) Unsaturated nucleosides and process for their preparation
Walton et al. 3'-Deoxynucleosides. IV. Pyrimidine 3'-Deoxynucleosides
Zhou et al. Regiospecific synthesis of branched tetranucleotides: U3'p5'A3'p5'U2'p5'G, U3'p5'A3'p5'C2'p5'G, A3'p5'A3'p5'U2'p5'G & A3'p5'A3'p5'C2'p5'G.
Liu et al. Synthesis of pyrazine C-ribosides via direct metalation
Ohtsuka et al. Transfer ribonucleic acids and related compounds. II. A method for synthesis of protected ribooligonucleotides using a ribonuclease
CN110066301B (en) Synthesis method of clindamycin phosphate
CN101203525B (en) Process of making an alpha-anomer enriched 2-deoxy-2,2-diflouro-d-ribofuranosyl sulfonate and use thereof for making a beta nucleoside
SU1018951A1 (en) Process for isolating and purifying sodium d-glucouronate and/or sodium 1,2-0-isopropylidene-d-glucouronate from mixtures also containing inorganic salts and/or carbonaceous impurities
US4110537A (en) Method of producing N1 -(2-tetrahydrofuryl)-5-fluorouracil
DE3516953A1 (en) METHOD FOR PRODUCING N (ARROW HIGH) 6 (ARROW HIGH) SUBSTITUTED 3 ', 5'-CYCLIC ADENOSINE MONOPHOSPHATE OR A SALT THEREOF
DE1240863B (en) Process for the oxidation of alcohols to the corresponding aldehydes or ketones
CN112745324B (en) Method for synthesizing nucleoside analogue by continuous flow reactor
SU659573A1 (en) Spin-labelled derivatives of oligoribonucleotides as spin probes for investigating mechanism of effect of ferments and method of obtaining same
CN1261371A (en) Process for the preparation of a deoxyuridine derivative
SU666183A1 (en) Method of producing active derivatives of dinucleotides

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination