CN116478553A - Red fluorescent dye based on pyran quinoline structure - Google Patents

Red fluorescent dye based on pyran quinoline structure Download PDF

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Publication number
CN116478553A
CN116478553A CN202210045393.2A CN202210045393A CN116478553A CN 116478553 A CN116478553 A CN 116478553A CN 202210045393 A CN202210045393 A CN 202210045393A CN 116478553 A CN116478553 A CN 116478553A
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fluorescent dye
dye
pyran
red
fluorescence
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刘兴江
牛培鑫
罗红辰
张文英
李禹函
魏柳荷
孙爱灵
刘华玉
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Henan Zhengdashan Zhipu Material Technology Co ltd
Zhengzhou University
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Zhengzhou University
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    • C09BORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B23/00Methine or polymethine dyes, e.g. cyanine dyes
    • C09B23/0008Methine or polymethine dyes, e.g. cyanine dyes substituted on the polymethine chain
    • C09B23/005Methine or polymethine dyes, e.g. cyanine dyes substituted on the polymethine chain the substituent being a COOH and/or a functional derivative thereof
    • C09B23/0058Methine or polymethine dyes, e.g. cyanine dyes substituted on the polymethine chain the substituent being a COOH and/or a functional derivative thereof the substituent being CN
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K49/00Preparations for testing in vivo
    • A61K49/001Preparation for luminescence or biological staining
    • A61K49/0013Luminescence
    • A61K49/0017Fluorescence in vivo
    • A61K49/0019Fluorescence in vivo characterised by the fluorescent group, e.g. oligomeric, polymeric or dendritic molecules
    • A61K49/0021Fluorescence in vivo characterised by the fluorescent group, e.g. oligomeric, polymeric or dendritic molecules the fluorescent group being a small organic molecule
    • A61K49/0032Methine dyes, e.g. cyanine dyes
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    • C09DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09BORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B23/00Methine or polymethine dyes, e.g. cyanine dyes
    • C09B23/02Methine or polymethine dyes, e.g. cyanine dyes the polymethine chain containing an odd number of >CH- or >C[alkyl]- groups
    • C09B23/04Methine or polymethine dyes, e.g. cyanine dyes the polymethine chain containing an odd number of >CH- or >C[alkyl]- groups one >CH- group, e.g. cyanines, isocyanines, pseudocyanines
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    • C09B23/00Methine or polymethine dyes, e.g. cyanine dyes
    • C09B23/10The polymethine chain containing an even number of >CH- groups
    • C09B23/105The polymethine chain containing an even number of >CH- groups two >CH- groups
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    • C09DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09KMATERIALS FOR MISCELLANEOUS APPLICATIONS, NOT PROVIDED FOR ELSEWHERE
    • C09K11/00Luminescent, e.g. electroluminescent, chemiluminescent materials
    • C09K11/06Luminescent, e.g. electroluminescent, chemiluminescent materials containing organic luminescent materials
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/645Specially adapted constructive features of fluorimeters
    • G01N21/6456Spatial resolved fluorescence measurements; Imaging
    • G01N21/6458Fluorescence microscopy
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    • C09K2211/00Chemical nature of organic luminescent or tenebrescent compounds
    • C09K2211/10Non-macromolecular compounds
    • C09K2211/1018Heterocyclic compounds
    • C09K2211/1025Heterocyclic compounds characterised by ligands
    • C09K2211/1029Heterocyclic compounds characterised by ligands containing one nitrogen atom as the heteroatom
    • C09K2211/1033Heterocyclic compounds characterised by ligands containing one nitrogen atom as the heteroatom with oxygen
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    • C09K2211/00Chemical nature of organic luminescent or tenebrescent compounds
    • C09K2211/10Non-macromolecular compounds
    • C09K2211/1018Heterocyclic compounds
    • C09K2211/1025Heterocyclic compounds characterised by ligands
    • C09K2211/1029Heterocyclic compounds characterised by ligands containing one nitrogen atom as the heteroatom
    • C09K2211/1037Heterocyclic compounds characterised by ligands containing one nitrogen atom as the heteroatom with sulfur
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    • C09K2211/00Chemical nature of organic luminescent or tenebrescent compounds
    • C09K2211/10Non-macromolecular compounds
    • C09K2211/1018Heterocyclic compounds
    • C09K2211/1025Heterocyclic compounds characterised by ligands
    • C09K2211/1088Heterocyclic compounds characterised by ligands containing oxygen as the only heteroatom

Abstract

The invention discloses a red fluorescent dye based on a pyranoquinoline structure, which belongs to the technical field of bioluminescence imaging, and has the following structure:

Description

Red fluorescent dye based on pyran quinoline structure
Technical Field
The invention belongs to the technical field of bioluminescence imaging, and particularly relates to a red fluorescent dye based on a pyranoquinoline structure and application of the red fluorescent dye in bioluminescence imaging seeds.
Background
The fluorescent dye has wide application in the life science fields of medical diagnosis, photodynamic therapy, fluorescence sensing and the like, so that the development of the novel fluorescent dye with good performance has important significance. The red/near infrared fluorescent dye has the advantages of good penetrability, small background interference, small damage to tissues and the like, and is widely applied to the field of biological imaging; fluorescent dyes with large stokes shifts can reduce self-absorption and increase their sensitivity. . The fluorescent probe developed based on fluorescent dye has the advantages of good selectivity, high sensitivity, convenient operation, real-time nondestructive detection and the like, and becomes an important tool in the technical field of analysis and detection. Therefore, it is interesting to develop new fluorescent dyes with red/near infrared emission and large stokes shift.
Pyran quinoline derivatives are heterocyclic compounds that are hybridized to the pyran and quinoline rings, which can be synthesized by Diels-Alder reaction of the heterocyclic ring. The current research is mainly focused on the synthesis method and biological activity. It is often used as a progesterone receptor modulator, glucocorticoid modulator and transcriptional activity modulator. From structural analysis, the pyran quinoline parent has a larger conjugated structure. The quinoline ring is an electron-deficient part, the pyran ring is an electron-donating part, and the pyran ring has the characteristic of a donor-acceptor D-A fluorescent dye, and the pyran quinoline is a potential chromophore. In 2012, talukdar et al reported for the first time the photophysical properties (lambda max =377nm,λ em =422 nm) (D.Kand, A.M.Kalle, S.J.Varma and P.Talukdar, chem.Commun.,2012,48,2722-2724); in 2014, lin et al have red shifted the wavelength to λ by introducing diethylamino into the pyran quinoline matrix em 483nm, and found to develop under acidic conditions due to protonation of the quinoline ringPeak of lambda em 545nm (w.huang, w.lin and x.guan, tetrahedron lett.,2014,55,116-119); in 2017, we have set the problem of introducing julolidine groups into pyranoquinoline dyes such that the emission wavelength red shifts to the yellow region (λ em =560 nm) (X.Liu, Y.Su, H.Tian, L.Yang, H.Zhang, X.SongandJ.W.Foley, anal.Chem.,2017,89,7038-7045); in 2018, our subject group developed methylated pyranoquinoline fluorescent dyes that can be red shifted to red fluorescence (lambda) em =622nm)(X.Liu,Y.Li,X.Ren,Q.Yang,Y.Su,L.He andX.Song,Chem.Commun.,2018,54,1509-1512)。
Based on this, we believe that the emission wavelength of the pyran quinoline fluorescent dye can be further increased and its stokes shift increased by increasing the molecular conjugate plane and increasing the charge transfer process within the molecule. In the invention, the pyran quinoline dye of a large conjugated system is constructed through conjugated double bonds for the first time, so that the emission wavelength is red shifted to far-red light.
Disclosure of Invention
The invention aims to provide a red fluorescent dye based on a pyran quinoline structure.
The fluorescent dye has the following molecular structure:
the fluorescent dye is prepared by the following synthetic route:
(a) Bromopropyne, potassium carbonate, N-dimethylformamide, 25 ℃ for 10h; (b) P-aminobenzyl alcohol, cuprous iodide, N-dimethylformamide, 110 ℃ for 6h; (c) manganese dioxide, methylene chloride, 25 ℃ for 5h; (d) piperidine, acetonitrile, reflux, 6h.
The fluorescent dyes of the present invention have long emission wavelengths and stokes shifts. The fluorescent dye shows long emission wavelength in different solvents, and the emission wavelength reachesRed light region. Maximum absorption peak (lambda) in different solvents abs ) Maximum emission peak (lambda) abs ) Stokes shift (Δss), molar extinction coefficient (ε), quantum yield (Φ) f ) And fluorescence lifetime (τ) are shown in the following table.
The fluorescent dye has lower cytotoxicity. After the HeLa cells and the probes are incubated for 24 hours at 37 ℃, the survival rate within 15.0 mu M is more than 90 percent.
The fluorescent dye can be used for well staining HeLa cells. Cells were stained red for fluorescence by co-culture with HeLa cells with dye (5.0. Mu.M).
The fluorescent dye can be used for imaging zebra fish. After incubation with zebra fish by probe (5.0. Mu.M), zebra fish were stained with red fluorescence.
The probe has good light stability. At 20mW/cm 2 The light degradation rate is less than 5% when the xenon lamp is irradiated for 1 hour.
Drawings
Fig. 1 is a graph of normalized uv-vis absorption spectra of dye 5a in different solvents. The abscissa is wavelength and the ordinate is absorbance.
FIG. 2 is a normalized fluorescence spectrum of dye 5a in different solvents. The abscissa is wavelength and the ordinate is fluorescence intensity.
Fig. 3 is a normalized uv-vis absorption spectrum of fluorescent dye 5b in different solvents. The abscissa is wavelength and the ordinate is absorbance.
FIG. 4 is a normalized fluorescence spectrum of dye 5b in different solvents. The abscissa is wavelength and the ordinate is fluorescence intensity.
Fig. 5 is a normalized uv-vis absorption spectrum of dye 5c in different solvents. The abscissa is wavelength and the ordinate is absorbance.
FIG. 6 is a normalized fluorescence spectrum of dye 5c in different solvents. The abscissa is wavelength and the ordinate is fluorescence intensity.
Fig. 7 is a normalized uv-vis absorption spectrum of dye 5d in different solvents. The abscissa is wavelength and the ordinate is absorbance.
FIG. 8 is a normalized fluorescence spectrum of dye 5d in different solvents. The abscissa is wavelength and the ordinate is fluorescence intensity.
FIG. 9 is a series of photophysical properties of fluorescent dyes of the present invention. Lambda (lambda) abs/nm Is the maximum absorption wavelength lambda em Is the maximum emission wavelength, delta ss Is Stokes shift, epsilon/M -1 cm -1 Is the molar extinction coefficient, Φ is the fluorescence quantum yield, τ/ns is the fluorescence lifetime.
FIG. 10 is a toxicity test of dye 5c of the present invention on HeLa cells. The abscissa indicates probe concentration, and the ordinate indicates cell viability.
FIG. 11 is a fluorescence image of co-staining of dye 5c (2.0. Mu.M) with Hela cells according to the invention. Imaging was performed after incubation for 15min in the dark at 37 ℃.
FIG. 12 is a fluorescent image of zebra fish staining with fluorescent dye 5c (2.0. Mu.M) of the present invention. Imaging after incubation for 15min at 28 ℃.
Examples of the embodiments
Example 1: synthesis of Compound 5a
Compound 4 (10.0 mmol) and 2- (2-methyl-4H-chromen-4-ylidene) malononitrile (10.0 mmol) were dissolved in 10mL of acetonitrile, 10. Mu.L of piperidine was added, stirred under reflux for 6 hours, after the reaction was completed, the solvent was removed under vacuum, and purified by column chromatography to give 5a in 73% yield. HRMS (ESI) m/z calcd.for C 34 H 27 N 4 O 2 [M+H] + 523.2134;found 523.2136. 1 H NMR(400MHz,CDCl 3 )δ8.28(s,1H),8.02(s,1H),7.80(d,J=8.9Hz,1H),7.73(d,J=7.4Hz,2H),7.52(dd,J=9.1,2.1Hz,2H),7.35(d,J=9.1Hz,2H),7.16(d,J=16.0Hz,1H),7.06(d,J=16.1Hz,1H),6.87(s,1H),6.52(d,J=10.1Hz,1H),6.23(d,J=2.4Hz,1H),5.29(d,J=9.3Hz,2H),3.43(q,J=7.1Hz,4H),1.22(d,J=7.1Hz,6H). 13 C NMR(100MHz,CDCl 3 )δ175.50,163.35,154.43,152.09,150.23,148.04,145.04,141.73,141.51,139.85,139.64,137.78,135.66,133.56,128.16,125.31,123.42,122.31,119.24,115.49,112.93,111.29,109.64,106.12,104.47,103.78,101.92,95.84,95.54,92.32,66.50,63.21,43.03,15.87。
Example 5: synthesis of Compound 5b
Compounds 4 (10 mmol) and 2- (benzo [ d)]Thiazol-2-yl) acetonitrile (10 mmol) was dissolved in 10mL acetonitrile, 10 μl piperidine was added, stirred under reflux for 6 hours, after the reaction was completed, the solvent was removed under vacuum, and purified by column chromatography to give 5c in 70% yield. HRMS (ESI) m/z calcd.for C 30 H 25 N 4 OS[M+H] + 489.1749;found 489.1742. 1 H NMR(400MHz,CDCl 3 )δ8.29(dt,J=8.9,7.1Hz,4H),8.09(d,J=8.0Hz,2H),7.92(d,J=7.9Hz,1H),7.81(s,1H),7.58–7.50(m,1H),7.47–7.40(m,1H),6.51(dd,J=9.0,2.4Hz,1H),6.21(d,J=2.3Hz,1H),5.28(s,2H),3.41(q,J=7.1Hz,4H),1.22(t,J=7.1Hz,6H). 13 C NMR(100MHz,CDCl 3 )δ163.03,159.71,153.69,151.91,146.10,143.67,135.00,131.35,131.09,129.70,128.73,127.41,126.94,126.81,126.49,125.94,125.71,124.09,123.56,121.67,121.58,117.29,116.83,107.24,104.69,98.00,68.38,58.47,44.68,18.44,12.71。
Example 6: synthesis of Compound 5c
Compound 4 (10 mmol) and 2- (3-cyano-4, 5-trimethylfuran-2 (5H) -ylidene) malononitrile (10 mmol) were dissolved in 10mL of acetonitrile, 10. Mu.L of piperidine was added, stirred under reflux for 6 hours, after completion of the reaction, the solvent was removed under vacuum and purified by column chromatography to give 5c in 85% yield. HRMS (ESI) m/z calcd.for C 32 H 28 N 5 O 2 [M+H] + 514.2243;found 514.2252. 1 H NMR(400MHz,CDCl 3 )δ7.95(s,1H),7.91(s,1H),7.55(d,J=9.1Hz,2H),6.88(s,1H),6.84(s,1H),6.42(dd,J=9.1,2.1Hz,2H),6.26(s,1H),4.81(d,J=2.4Hz,4H),3.49(d,J=7.1Hz,6H),2.62(t,J=2.3Hz,2H),1.27(s,6H). 13 C NMR(100MHz,CDCl 3 )δ193.61,180.90,176.54,175.04,167.16,160.21,157.32,153.32,152.72,143.16,131.58,131.50,129.44,127.63,113.05,112.45,112.43,112.25,111.66,108.74,108.68,106.91,99.14,96.60,95.02,93.11,58.48,56.41,45.43,27.03,18.44,12.72。
Example 7: synthesis of Compound 5d
Compound 4 (10 mmol) and ethyl 2-cyanoacetate (10 mmol) were dissolved in 10mL of acetonitrile, 10. Mu.L of piperidine was added, stirred under reflux for 6 hours, after the reaction was completed, the solvent was removed under vacuum and purified by column chromatography to give 5d in 81% yield. HRMS (ESI) m/z calcd.for C 26 H 26 N 3 O 3 [M+H] + 428.1974;found 428.1977. 1 H NMR(400MHz,CDCl 3 )δ8.32(d,J=7.8Hz,2H),8.29–8.19(m,2H),8.05(d,J=8.8Hz,1H),7.79(s,1H),6.51(dd,J=9.0,2.3Hz,1H),6.22(d,J=2.3Hz,1H),5.27(s,2H),4.40(q,J=7.1Hz,2H),3.42(q,J=7.1Hz,4H),1.42(t,J=7.1Hz,3H),1.22(t,J=7.1Hz,6H). 13 C NMR(100MHz,CDCl 3 )δ162.83,159.76,154.28,152.57,151.92,132.77,131.06,129.86,129.70,127.73,127.39,126.38,125.76,115.98,110.40,107.21,101.73,97.97,68.38,62.69,44.68,31.51,30.13,29.71,14.22,12.71。
Example 8: dye 5c staining of cells
The HeLa cells were incubated with PBS buffer containing dye 5c (5.0. Mu.M) for 15min, and after rinsing 3 times with PBS buffer, the cells were imaged by fluorescence with a confocal laser fluorescence microscope, and a strong red fluorescence signal was observed.
Example 9: dye 5c fluorescent staining of zebra fish
Zebra fish is cultured in E3 embryo culture medium at 28deg.C, wherein the culture medium comprises 15mM NaCl and 0.5mM MgSO 4 ,1mM CaCl 2 ,0.15mM KH 2 PO 4 ,0.05mM Na 2 HPO 4 ,0.7mM NaHCO 3 And 1% methylene blue. The pH of the medium was 7.5. Fluorescence imaging observations were performed after 3-day-old zebra fish were selected and incubated with dye 5c (5.0 μm) for 30 minutes. Zebra fish can be observed to be stained with red fluorescence.

Claims (1)

1. The red fluorescent dye based on the pyran quinoline structure is characterized by having the structural formula:
CN202210045393.2A 2022-01-15 2022-01-15 Red fluorescent dye based on pyran quinoline structure Pending CN116478553A (en)

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Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105504860A (en) * 2014-10-20 2016-04-20 中南大学 Synthesis and applications of pyranoquinoline fluorescent dye
CN109400616A (en) * 2018-11-02 2019-03-01 广西师范大学 A kind of Sulfur Dioxide-derivatives fluorescence probe and its preparation method and application

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105504860A (en) * 2014-10-20 2016-04-20 中南大学 Synthesis and applications of pyranoquinoline fluorescent dye
CN109400616A (en) * 2018-11-02 2019-03-01 广西师范大学 A kind of Sulfur Dioxide-derivatives fluorescence probe and its preparation method and application

Non-Patent Citations (6)

* Cited by examiner, † Cited by third party
Title
CAI FANGYUAN ET AL: "A chromenoquinoline-based two-photon fluorescent probe for the highly specific and fast visualization of sulfur dioxide derivatives in living cells and zebrafish", JOURNAL OF MATERIALS CHEMISTRY B: MATERIALS FOR BIOLOGY AND MEDICINE, vol. 7, no. 15, pages 2493 - 2498 *
HUANG WEIMIN ET AL: "Development of ratiometric fluorescent pH sensors based on chromenoquinoline derivatives with tunable pKa values for bioimaging", TETRAHEDRON LETTERS, vol. 55, no. 1, pages 116 - 119, XP093068329, DOI: 10.1016/j.tetlet.2013.10.130 *
JOSHI SUNITA: "Synthesis, solvatochromism and electric dipole moment study of coumarin-fused quinoline: experimental and quantum chemical computational investigations", EUROPEAN PHYSICAL JOURNAL D: ATOMIC, MOLECULAR, OPTICAL AND PLASMA PHYSICS, vol. 75, no. 5, pages 153, XP037483651, DOI: 10.1140/epjd/s10053-021-00169-6 *
KUMARI SANTOSH ET AL: "NH4OAc-Promoted Cascade Approach towards Aberrant Synthesis of Chromene-Fused Quinolinones", EUROPEAN JOURNAL OF ORGANIC CHEMISTRY, vol. 2019, no. 4, pages 705 - 714 *
LIU XINGJIANG ET AL: "Methylated chromenoquinoline dyes: synthesis, optical properties, and application for mitochondrial labeling", CHEMICAL COMMUNICATIONS (CAMBRIDGE, UNITED KINGDOM), vol. 54, no. 12, pages 1509 - 1512, XP055915651, DOI: 10.1039/C7CC08154E *
WANG XIAO-BO ET AL: "A novel mitochondrial-targeted two-photon fluorescent probe for ultrafast monitoring of SO2 derivatives and its applications", TALANTA, vol. 217, pages 121086 *

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