CN116425316B - Application of sperm whale Mb and mutant H64D/V68I Mb in degradation of sulfonamide compounds - Google Patents

Application of sperm whale Mb and mutant H64D/V68I Mb in degradation of sulfonamide compounds Download PDF

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CN116425316B
CN116425316B CN202310229633.9A CN202310229633A CN116425316B CN 116425316 B CN116425316 B CN 116425316B CN 202310229633 A CN202310229633 A CN 202310229633A CN 116425316 B CN116425316 B CN 116425316B
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degradation
mutant
sperm whale
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degrading
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CN116425316A (en
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徐甲坤
张伟康
王芳
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Yellow Sea Fisheries Research Institute Chinese Academy of Fishery Sciences
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Yellow Sea Fisheries Research Institute Chinese Academy of Fishery Sciences
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    • CCHEMISTRY; METALLURGY
    • C02TREATMENT OF WATER, WASTE WATER, SEWAGE, OR SLUDGE
    • C02FTREATMENT OF WATER, WASTE WATER, SEWAGE, OR SLUDGE
    • C02F3/00Biological treatment of water, waste water, or sewage
    • C02F3/34Biological treatment of water, waste water, or sewage characterised by the microorganisms used
    • C02F3/342Biological treatment of water, waste water, or sewage characterised by the microorganisms used characterised by the enzymes used
    • CCHEMISTRY; METALLURGY
    • C02TREATMENT OF WATER, WASTE WATER, SEWAGE, OR SLUDGE
    • C02FTREATMENT OF WATER, WASTE WATER, SEWAGE, OR SLUDGE
    • C02F2101/00Nature of the contaminant
    • C02F2101/30Organic compounds
    • C02F2101/38Organic compounds containing nitrogen
    • CCHEMISTRY; METALLURGY
    • C02TREATMENT OF WATER, WASTE WATER, SEWAGE, OR SLUDGE
    • C02FTREATMENT OF WATER, WASTE WATER, SEWAGE, OR SLUDGE
    • C02F2101/00Nature of the contaminant
    • C02F2101/30Organic compounds
    • C02F2101/40Organic compounds containing sulfur
    • YGENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02ATECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

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  • Microbiology (AREA)
  • Biodiversity & Conservation Biology (AREA)
  • Hydrology & Water Resources (AREA)
  • Engineering & Computer Science (AREA)
  • Environmental & Geological Engineering (AREA)
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  • Organic Chemistry (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

The invention relates to application of sperm whale Mb and mutant H64D/V68IMb in degrading sulfonamide compounds, belonging to the technical field of biology, wherein the nucleotide sequence of the H64D/V68IMb is as follows: the nucleotide sequence of SEQ ID NO.1, wild type sperm whale Mb is: SEQ ID NO.2. Wild type sperm whale Mb and mutant H64D/V68IMb at H 2 O 2 The method for degrading the sulfonamide compound by biological catalysis under the condition of an oxidant, and materials used in the reaction process and products after the reaction basically cannot damage the environment or cause secondary pollution. The degradation process is very stable, the catalytic speed is high, the degradation rate can reach more than 90% in 30 minutes, and the degradation process can be accurately repeated in the follow-up process.

Description

Application of sperm whale Mb and mutant H64D/V68I Mb in degradation of sulfonamide compounds
Technical Field
The invention belongs to the technical field of biology, and particularly relates to application of sperm whale Mb and mutant H64D/V68I Mb in degrading sulfonamide compounds.
Background
The sperm whale myoglobin is a small Heme protein, and consists of Heme (Heme) and 153 amino acids, wherein the prosthetic Heme is a complex formed by (sub) iron ions and protoporphyrin (protoporphyrins), and the main biological function is oxygen storage and no catalytic function. Through protein molecular design, the methods of metal ion, hydrogen bond network, heme post-modification, domain exchange and the like are utilized, and the heme active center structure and Mb multiple biocatalysis functions including peroxidase activity can be successfully regulated and controlled. Myoglobin and its mutants are therefore also subjects of many scholars. Through gene site-directed mutagenesis, val68 valine is mutated into Ile residue, a heme-centered channel is constructed, namely His64 histidine "gate" is mutated into Asp residue, and mutant H64D/V68I Mb is obtained. Meanwhile, in recent years, heterologous expression has also attracted much attention, especially in E.coli, because of its low cost, high expression level and relatively simple isolation and purification of the expression product.
The mutant H64D/V68I Mb has been constructed in the article Molecular Engineering of Myoglobin: influence of Residue 68 on the Rate and the Enantioselectivity of Oxidation Reactions Catalyzed by H64D/V68X Myoglobin, and shows good catalytic activity on thiomethyl ether. In the Construction of biocatalysts using the myoglobin scaffold for the synthesis of indigo from indole article, it was shown that the peroxidase activity of the sulfoxylation of anisole and the epoxidation of styrene was increased.
According to the prior reports, the method for degrading the sulfonamide compound mainly comprises a physical method, a chemical method, a photodegradation method and a biological method. The physical method mainly realizes the separation of antibiotics by adsorption, ion exchange, membrane separation technology and the like. The sulfonamide compound can be removed by a physical method, and the method is not widely applied because the adsorption capacity of the adsorbent is limited. Chemical methods mainly include chlorination processes and advanced oxidation techniques. Chemical degradation of sulfonamide compounds is the complete conversion thereof to small molecules, but the high cost of catalysts and promoters limits the large-scale use of such processes. The biological method mainly adopts an aerobic biological treatment method, an anaerobic biological treatment method and an anaerobic-aerobic biological combination method. The biological method has the advantages of mild reaction conditions, low energy consumption, low treatment cost and the like, but the removal of the sulfonamide antibiotics requires a long time and depends on the environment (nitrogen source, carbon source and the like).
Therefore, the development of a method for efficiently and environmentally degrading the sulfonamide compound has profound significance for environmental protection and sustainable development.
Disclosure of Invention
The technical problem to be solved by the invention is to provide application of sperm whale Mb and mutant H64D/V68I Mb in degrading sulfonamide compounds.
The technical scheme of the invention is summarized as follows:
application of H64D/V68I Mb in degrading sulfonamide compound, mixing H64D/V68I Mb with sulfonamide compound wastewater to make sulfonamide compound concentration in reaction mixture be 0.2mM/L, myoglobin mutant concentration be 10 μm/L, adding H with final concentration of 1mM/L 2 O 2 The reaction is carried out at 37 ℃ in the dark and pH6.2。
Further, the sulfonamide compounds are sulfathiazole and sulfadiazine.
The nucleotide sequence of the H64D/V68I Mb is as follows:
atggttctgtctgaaggtgaatggcagctggttctgcatgtttgggctaaagttgaagctgacgtcgctggtcatggtcaggacatcttgattcgactgttcaaatctcatccggaaactctggaaaaattcgatcgtttcaaacatctgaaaactgaagctgaaatgaaagcttctgaagatctgaaaaaagatggtgttaccattttaactgccctaggtgctatccttaagaaaaaagggcatcatgaagctgagctcaaaccgcttgcgcaatcgcatgctactaaacataagatcccgatcaaatacctggaattcatctctgaagcgatcatccatgttctgcattctagacatccaggtaacttcggtgctgacgctcagggtgctatgaacaaagctctcgagctgttccgtaaagatatcgctgctaagtacaaagaactgggttaccagggttaatga
the invention also provides application of the sperm whale wild myoglobin in preparation of a preparation of the degradation sulfonamide compound, wherein the nucleotide sequence of the wild myoglobin is as follows:
atggttctgtctgaaggtgaatggcagctggttctgcatgtttgggctaaagttgaagctgacgtcgctggtcatggtcaggacatcttgattcgactgttcaaatctcatccggaaactctggaaaaattcgatcgtttcaaacatctgaaaactgaagctgaaatgaaagcttctgaagatctgaaaaaacatggtgttaccgtgttaactgccctaggtgctatccttaagaaaaaagggcatcatgaagctgagctcaaaccgcttgcgcaatcgcatgctactaaacataagatcccgatcaaatacctggaattcatctctgaagcgatcatccatgttctgcattctagacatccaggtaacttcggtgctgacgctcagggtgctatgaacaaagctctcgagctgttccgtaaagatatcgctgctaagtacaaagaactgggttaccagggttaatga
further, the sulfonamide compounds are sulfathiazole and sulfadiazine.
The sulfonamide compounds are of various types, and therefore, the invention selects two types with relatively high content and high attention in the environment: sulfathiazole and sulfadiazine.
The method of the invention not only establishes a method that the H is H64D/V68I Mb 2 O 2 The method for degrading the sulfonamide compound by biological catalysis under the condition of an oxidant, and materials used in the reaction process and products after the reaction basically cannot damage the environment or cause secondary pollution. The degradation process is very stable and the catalysis speed is highThe degradation rate is high, the degradation rate in 30 minutes can reach more than 90 percent, and the degradation rate can be accurately repeated in the follow-up process.
Drawings
FIG. 1 shows the purification of Wild Type (WT) sperm whale myoglobin and its mutant H64D/V68I Mb;
FIG. 2 is a bar graph of H64D/V68I Mb degradation Sulfathiazole (ST) at different concentrations;
FIG. 3 is a bar graph of Sulfadiazine (SD) degradation at different concentrations of H64D/V68I Mb.
Detailed Description
The invention is further illustrated below in connection with specific examples:
in various embodiments:
the LB medium is: tryptone (tryptone) 10g/L; yeast extract (yeast extract) 5g/L; naCl 10g/L, natural pH, water and sterilizing.
The potassium phosphate buffer solution is: monopotassium phosphate (KH) 2 PO 4 ) And dipotassium hydrogen phosphate (K) 2 HPO 4 ) The balance was water, adjusted according to concentration and pH, and filtered using a filter membrane having a pore size of 0.22 μm.
Example 1
(1) Myoglobin mutant preparation: the Mb gene of pMbt7-7 was used to express the Wild Type (WT) sperm whale Mb and H64D/V68I Mb in BL21 (DE 3) cells. The WT Mb gene is used as a template, the mutation is performed by Polymerase Chain Reaction (PCR) box type mutagenesis, after the mutation is completed, gene sequencing is performed by a biological company, comparison is performed with a wild type gene, a sequence with successful mutation is selected according to an amino acid codon comparison table, an H64D/V68IMb gene is constructed, and the gene is introduced into BL21 (DE 3) cells.
(2) Protein culture, expression, purification and concentration determination: coli containing H64D/V68I Mb was cultured in LB medium containing ampicillin (100 mg/L), harvested in late log phase, lysed and sonicated. Cell debris was removed by centrifugation and the supernatant was separated by ammonium sulfate precipitation. The pellet was dissolved in a minimum amount of potassium phosphate buffer (10 mM, pH 6.0) and then dialyzed against the same buffer. Application of dialysate to Balanced cations with the same bufferSub-column (Hiprep) TM CM FF 16/60). The cation exchange column was eluted with a linear gradient from 10mM potassium phosphate buffer (pH 6.0) to 40mM (pH 9.0). H64D/V68I Mb was further purified by eluting with potassium phosphate buffer (50 mM, pH 7.0) using gel size exclusion chromatography (HiPrep 26/60Sephacryl S-100 HR), and the concentration of Mb mutant was determined by the pyridine hemochromatograms method as shown in FIG. 1.
(3) Degrading sulfonamide compounds: mixing the sulfathiazole-containing wastewater with the H64D/V68I Mb obtained in the step (2), and mixing the sulfathiazole-containing wastewater with the WT Mb in the other group. The concentration of sulfonamide compound in the reaction mixture was 0.2mM/L, the concentrations of H64D/V68I Mb and WT Mb were 10. Mu.M/L, and 1mM/L of H was added respectively 2 O 2 . The reaction was carried out at 37℃for 30min in the absence of light at pH 6.2.
Determination of sulfathiazole and sulfadiazine concentrations using High Performance Liquid Chromatography (HPLC) analysis, use of Shimadzu LC-20A equipped with SPD-M20A UV-visible detector, use of Waters SunFire TM C18 (4.6X150 mm,5 μm) and UV-visible detectors. The mobile phases of SD and ST were ultrapure water (0.01% phosphoric acid) and acetonitrile, respectively, in a ratio of 70:30 (v/v) the UV detection wavelengths were 268nm and 270nm, respectively. The flow rate of the detection procedure was 1mL/min and the column oven was set at 25 ℃.
As shown in FIG. 2, through result analysis, H64D/V68I Mb catalyzes the sulfathiazole to degrade, and the degradation efficiency is 99.68%; WT Mb catalyzes sulfathiazole degradation with a degradation efficiency of 85.93%.
Example 2
This example replaces the sulfathiazole of example 1 with sulfadiazine, otherwise identical to example 1. Wherein H64D/V68I Mb catalyzes sulfadiazine to degrade with a degradation efficiency of 91.61%; WT Mb catalyzes sulfadiazine degradation with a degradation efficiency of 77.88%, as shown in FIG. 3.

Claims (1)

  1. The application of H64D/V68I Mb in degrading sulfonamide compound is characterized in that the application method is to mix H64D/V68I Mb with the sulfonamide compound wastewater to make the concentration of sulfonamide compound in the reaction mixture be 0.2mM/L and the concentration of myoglobin mutant H64D/V68I Mb be 10 mu M/L,adding H with final concentration of 1mM/L 2 O 2 The reaction is carried out at 37 ℃ in the dark and pH6.2, and the nucleotide sequence of the H64D/V68I Mb is as follows: SEQ ID NO.1, wherein the sulfonamide compound is sulfathiazole.
CN202310229633.9A 2023-03-10 2023-03-10 Application of sperm whale Mb and mutant H64D/V68I Mb in degradation of sulfonamide compounds Active CN116425316B (en)

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Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2185605A1 (en) * 1996-09-16 1998-03-17 Harry Tong Myoglobin with peroxidase activity
CN104085975A (en) * 2014-06-23 2014-10-08 陕西师范大学 Method for degrading sulfadimethoxine under catalysis of chloroperoxidase
CN106277362A (en) * 2016-08-31 2017-01-04 天津大学 Method with pycnoporus samguineus degraded sulfonamides compound
CN108484754A (en) * 2018-03-26 2018-09-04 南华大学 A kind of preparation and application of the artificial metal hydrolase based on metal ion-myoglobins mutant complexes
CN108752469A (en) * 2018-07-02 2018-11-06 南华大学 A kind of biological preparation method that the dyestuff based on myoglobins mutant is indigo

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2185605A1 (en) * 1996-09-16 1998-03-17 Harry Tong Myoglobin with peroxidase activity
CN104085975A (en) * 2014-06-23 2014-10-08 陕西师范大学 Method for degrading sulfadimethoxine under catalysis of chloroperoxidase
CN106277362A (en) * 2016-08-31 2017-01-04 天津大学 Method with pycnoporus samguineus degraded sulfonamides compound
CN108484754A (en) * 2018-03-26 2018-09-04 南华大学 A kind of preparation and application of the artificial metal hydrolase based on metal ion-myoglobins mutant complexes
CN108752469A (en) * 2018-07-02 2018-11-06 南华大学 A kind of biological preparation method that the dyestuff based on myoglobins mutant is indigo

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
Monooxygenation of an Aromatic Ring by F43W/H64D/V68I Myoglobin Mutant and Hydrogen Peroxide;Thomas D. Pfister等;《The Journal of Biological Chemistrry》;第280卷(第13期);第12858-12866页 *

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