CN116376843B - Adeno-associated virus susceptibility cell strain and application thereof - Google Patents
Adeno-associated virus susceptibility cell strain and application thereof Download PDFInfo
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Abstract
The present disclosure provides adeno-associated virus-susceptible cell strains and uses thereof, and in particular, provides adeno-associated virus-susceptible cell strains and uses thereof. The cell strain is a cell strain with a preservation number of CCTCC NO: human kidney epithelial cell 293-AH cell of C202338 which stably expresses three genes of adenovirus (Ad 5): the E4 gene (Orf 6), the E2A gene and the VARNA gene have high susceptibility to adeno-associated viruses (AAV) of different serotypes, and can be used for quantitative test of infection titer of AAV.
Description
Technical Field
The invention belongs to the technical field of biology, and relates to three genes for stably expressing adenovirus (Ad 5) based on HEK293 cells: cell lines of E4 gene (Orf 6), E2A gene and VARNA gene. The invention also relates to the application of the cell strain in determining AAV infection titer.
Background
Along with the popularization of bioengineering technology in various fields of scientific research, food, chemical industry, medical treatment and the like, various DNA-based gene vectors are widely used, and a method using viruses as DNA delivery vectors is widely used. Among them, AAV (adeno-associated virus), a single-stranded linear DNA-deficient virus, requires a helper virus (adenovirus or herpes virus) to replicate in vivo when infected at the same time. Its advantages are high safety (no report of AAV to human), low immunogenicity, broad spectrum, long expression time, high dispersivity and stability. Thus rAAV (recombinant AAV) is suitable as a DNA vector for the treatment of gene-related clinical diseases.
The determination of rAAV titer is one of the very important vector quality assessment indicators in the fields of scientific research, clinical research and bioengineering pharmacy, in particular in the field of Cellular Gene Therapy (CGT), and the accuracy is remarkable in the practical significance of AAV-related application. The main measurement mode in production at present is to directly measure the genome titer (Vg) of rAAV by qPCR, and the method has the defects that the activity of AAV virus samples and the actual capability of infected cells cannot be reflected, and the number of virus particles can only be estimated by the DNA copy number in the samples; to more accurately reflect the viability of the rAAV and its actual ability to infect cells, it is necessary to determine the infection titer (informatios titer) of the rAAV. AAV infection does not produce cytopathic effects and therefore cannot be assayed for infectious titer by plaque assay, but in the case of co-participation of adenovirus (Ad) helper proteins, AAV can be induced to replicate in cells and express genes in the viral genome, whereby infected cells can be detected by detecting the expression of the replicated viral genome or reporter gene, and then the infectious titer of the original AAV virus can be estimated from the gradient dilution ratio.
There are several more common methods of measuring infection titres including: determination of the half-number infection of AAV (TCID) 50 ) The method comprises the steps of carrying out a first treatment on the surface of the The method uses AAV2 diluted in gradient and adenovirus (Ad) with certain concentration to co-infect existing AAV2repAndcap hela cell line with stable gene expression, and after AAV2 is replicated in cell for a certain period of time, the copy number of the newly replicated AAV2 genome sequence is detected by qPCR methodFrom this, the original AAV2 virus infection titer was estimated. Another method is ICA (infectious center assay); the detection method is similar to the previous method, AAV2 is still diluted in a gradient mode with the aid of Ad5, and the existing AAV2 is co-infectedrepAndcap the Hela cell line with stable gene expression is inoculated onto nylon membrane coated with hybridized probe, so that the infection titer of virus is calculated by analyzing the positive cell number on the membrane. In addition, the titer of infection can be determined by detecting the intensity of a reporter gene carried by the virus expressed by the infected cells. The method is to dilute the purified virus gradient, infect a certain amount of susceptible cells, and calculate the positive cell number expressing the reporter gene and the dilution ratio to calculate the infection titer of the virus. When used to detect infectious titres of AAV, adenovirus co-infection is often used to obtain expression of accessory genes in order to increase susceptibility to AAV.
In summary, when these conventional methods detect rAAV infection titers, the presence of helper viruses such as adenovirus is often required, the introduction and preparation of other virus assays involve not only waste of additional production material of another virus, long testing time (typically more than one week is required), but also adenovirus infection can lead to cytopathic effects, greater toxicity, and massive death of the test cells, affecting data statistics. Meanwhile, co-infection of multiple viruses can also cause data instability between different test batches. Furthermore, for test protocols requiring the use of cell lines stably expressing AAV2 Rep and Cap, the titer test is also affected by the toxicity of the Rep and Cap proteins to the cells. Thus, there is a need in the art to design new helper-free cells for detecting infectious titers of individual AAV serotypes.
Disclosure of Invention
In one aspect, provided herein is a CCTCC NO: human kidney epithelial cell 293-AH cells of C202338.
The cell strain 293-AH is deposited in China center for type culture Collection, address: university of chinese martial arts, date of preservation: 2023, 2 and 14 days, deposit number: cctccc NO: C202338.
in another aspect, provided herein is the use of the human kidney epithelial cell 293-AH cell described above for detecting viral titers of adeno-associated viruses.
In some embodiments, the human kidney epithelial cells 293-AH cells stably moderately express the three genes of adenovirus (Ad 5) by using a low promoter (minimal CMV): the E4 gene (Orf 6), the E2A gene and the VARNA gene reduce the toxicity of the expression products of the three genes to the 293-AH cells of the human kidney epithelial cells, thereby screening and obtaining stable cell strains.
In some embodiments, the adeno-associated virus may be selected from various serotypes of AAV, such as common AAV1, AAV2, AAV5, AAV6, AAV7, AAV8, AAV9, or other particular serotypes of AAV.
In some embodiments, the adeno-associated virus is a recombinant adeno-associated virus.
In another aspect, provided herein is a kit for detecting viral titer of adeno-associated virus comprising the human kidney epithelial cell 293-AH cell described above.
In another aspect, provided herein are adeno-associated viruses that can be selected from a wide variety of serotypes of AAV, such as common AAV1, AAV2, AAV5, AAV6, AAV7, AAV8, AAV9, or other particular serotypes of AAV.
In another aspect, provided herein is that the adeno-associated virus is a recombinant adeno-associated virus.
The human kidney epithelial cell 293-AH cell line provided herein stably expresses three genes of adenovirus (Ad 5): e4 gene (Orf 6), E2A gene and VARNA gene. Compared with HEK293 cells, the expression of target genes after rAAV infection cells can be improved, and the sensitivity and accuracy of measuring AAV infection titer can be improved under the condition of no helper virus.
Drawings
Fig. 1: pHelper plasmid map containing the gene plasmid of interest.
Fig. 2: the results were photographed under a fluorescence microscope after infection of rAAV-GL with 293-AH and HEK 293. 293-AH and HEK293 are infected with rAAV-GL of the same MOI (1E+05) and different serotypes (1/2/5/6), and the fluorescence intensity of the expression of the 293-AH is obviously higher than that of HEK293 cells. Graphs a-D: fluorescence microscopy pictures of rAAV-GL infected with HEK293 cells of different serotypes (1/2/5/6), respectively; graphs E-H: fluorescence microscopy photographs of rAAV-GL of different serotypes (1/2/5/6) were infected with 293-AH cells, respectively.
Fig. 3: the results were photographed under a fluorescence microscope after infection of rAAV-GL with 293-AH and HEK 293. 293-AH and HEK293 are infected with rAAV-GL of the same MOI (1E+05) and different serotypes (7/8/9), and the fluorescence intensity of the expression of the 293-AH is obviously higher than that of HEK293 cells. Graphs I-K: fluorescence microscopy pictures of rAAV-GL infected with HEK293 cells of different serotypes (7/8/9), respectively; graph L-N: fluorescence microscopy photographs of rAAV-GL of 293-AH cells infected with different serotypes (7/8/9), respectively.
Fig. 4: infection detection sensitivity of rAAV8-GL was detected by using 293-AH and HEK293 cells. The sensitivity of detection of 293-AH (significantly different from the virus-free blank) was more than 2-fold that of HEK293 cells.
Detailed Description
Unless otherwise defined, all technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art.
The experimental methods not specifically described in the invention are all carried out according to the specifications of related products. The biological agents used in the present invention, without specific description, are commercially available. Numerous variations, changes, and substitutions will occur to those skilled in the art without departing from the spirit of the invention.
The main materials involved in the invention comprise plasmids synthesized by Anhui general biological company; HEK293 cells (american ATCC center); polyethylenimine (PEI, polyplus company, usa); recombinant AAV serotype 1 (rAAV 1-GL), serotype 2 (rAAV 2-GL), serotype 5 (rAAV 5-GL), serotype 6 (rAAV 6-GL), serotype 7 (rAAV 7-GL), serotype 8 (rAAV 8-GL) and serotype 9 (rAAV 9-GL) carrying the green fluorescent protein (NeonGreen) gene and the luciferase reporter gene (teLuc) were all purchased from Yiming cells, the plasmid pHelper involved in cell preparation, the genes comprising the E4 gene (Orf 6), the E2A gene and the VARNA gene and the puromycin resistance gene were chemically synthesized (general organisms).
EXAMPLE 1 screening of stably surviving monoclonal cells
This example describes the preparation of transgenic cell lines and the screening process, briefly as follows.
1) The plasmid pHelper was synthesized and the genes contained in this plasmid included the E4 gene (Orf 6), E2A gene, VARNA gene, and puromycin resistance gene (Puromycin R) (see FIG. 1);
2) Culturing HEK293 cells to logarithmic growth phase, inoculating 6-well cell culture plate, 2E6 cells/well;
3) The plasmid described in 1) was transfected by the PEI method in a daily dose of 1. Mu.g, PEI to plasmid ratio of 3:1, a step of;
4) After 72 hours of transfection, the adherent cells are digested, and after uniform mixing, monoclonal is selected in a 48-well plate, and 2 mug/mL puromycin is added into each well;
5) Screening out cells (HEK 293-1# -HEK293-16 #) which can be stably amplified.
Example 2 selection of cell lines
1) Culturing HEK293-1# -HEK293-16# selected in example 1; and HEK293 cells (HEK 293-0#) to log phase, 24 well cell plates, 5E5 cells/well;
5) Cells with stronger fluorescence in all the monoclonal cells were selected 48h after infection with rAAV8-GL (MOI 1E+05).
The relative fluorescence intensities (converted to comparison with the fluorescence intensity of cell line HEK293-0 #) are shown in Table 1.
。
We named the cell line HEK293-2# which can be stably passaged 293-AH, deposited with the chinese collection of typical cultures at: the preservation date of the university of Chinese Wuhan is: 2023, 2 and 14 days with deposit number: cctccc NO: C202338.
EXAMPLE 3 expression of the target protein after infection of rAAV by 293-AH cells
This example looks at infection of HEK293 cells with AAV of different serotypes.
The experimental procedure was as follows:
1) HEK293 cells and 293-AH cells (passaged 10 times) were cultured to log phase and inoculated with 24-well cell culture plates, 5E5 cells/well;
2) The two cells in the next day are respectively infected with rAAV1-GL, rAAV2-GL, rAAV5-GL, rAAV6-GL, rAAV7-GL, rAAV8-GL and rAAV9-GL, and MOI is 1E+05;
3) 48h and images were observed and acquired using a fluorescence microscope (488/520 green filter set).
As shown in FIGS. 2A-2H and FIGS. 3I-3N, the fluorescence intensity of 293-AH expression was significantly higher for different serotypes of AAV than for HEK293 cells.
Example 4 comparison of sensitivity of 293-AH cells to HEK293 cells after infection with rAAV
This example quantitatively examines the difference in sensitivity of 293-AH cells and HEK293 cells to rAAV8 infection.
The experimental procedure was as follows:
1) Inoculating cells: the 293-AH cells and HEK293 cells (HEK 293 cells transfected with pHelper plasmid and antibiotic selection as in example 1) were inoculated into bottom-permeabilized white 96-well plates, 2-thousand/well, 100. Mu.L per well volume, 37℃and 5% CO at 2-3 passages after resuscitation 2 Culturing for 16h;
2) Viral infection: 10 mu L of rAAV8-GL diluted in a 2-fold gradient is added into each hole, and infection is carried out for 48-72 hours;
3) Cell lysis: taking out the infected culture plate, allowing each hole to act for 5 min at room temperature by using Triton-X100 with a final concentration of 1%, and then placing under a fluorescence enzyme-labeling instrument for luciferase activity measurement;
4) Luciferase activity assay: luciferase substrate was added per well: diphenyl terazine (DTZ, final concentration 30. Mu.M), shaking and mixing well, and detecting the luminous intensity.
As shown in FIG. 4, 293-AH cells infected rAAV8 at least 2-fold more sensitive than HEK293 transfected with pHelper plasmid.
Conclusion(s)
The cell strain 293-AH stably expresses three genes of adenovirus (Ad 5): e4 gene (Orf 6), E2A gene and VARNA gene. Compared with HEK293 cells, 293-AH cells can improve the expression of target genes after rAAV infection cells, and can increase the sensitivity and accuracy of measuring AAV infection titer under the condition of no helper virus. The cell strain 293-AH provided by the invention is based on HEK293 cells commonly used in AAV production, and is prepared by using a low-promoter-activity promoter (minimum CMV) to stably and moderately express three genes of adenovirus (Ad 5): the E4 gene (Orf 6), the E2A gene and the VARNA gene reduce the toxicity of the exogenous adenovirus proteins to cells, unexpectedly obtain stable cell strains, and can be directly used for detecting AAV infection titer. The invention makes the AAV infection titer test faster (only 2-3 days), convenient, sensitive, accurate, stable and low cost, as no additional helper virus is required.
The minimal CMV promoter and gene sequences mentioned herein are as follows:
minimal CMV promoter: (SEQ ID NO: 1)
taggcgtgtacggtgggaggcctatataagcagagctggtttagtgaaccgtcagatcgcctggagtcgccatccacgctgttttgacctccatagaagacaccgggaccgatccagcctccgcggccc
Ad5 E4Orf6: (SEQ ID NO: 2)
ctacatgggggtagagtcataatcgtgcatcaggatagggcggtggtgctgcagcagcgcgcgaataaactgctgccgccgccgctccgtcctgcaggaatacaacatggcagtggtctcctcagcgatgattcgcaccgcccgcagcataaggcgccttgtcctccgggcacagcagcgcaccctgatctcacttaaatcagcacagtaactgcagcacagcaccacaatattgttcaaaatcccacagtgcaaggcgctgtatccaaagctcatggcggggaccacagaacccacgtggccatcataccacaagcgcaggtagattaagtggcgacccctcataaacacgctggacataaacattacctcttttggcatgttgtaattcaccacctcccggtaccatataaacctctgattaaacatggcgccatccaccaccatcctaaaccagctggccaaaacctgcccgccggctatacactgcagggaaccgggactggaacaatgacagtggagagcccaggactcgtaaccatggatcatcatgctcgtcatgatatcaatgttggcacaacacaggcacacgtgcatacacttcctcaggattacaagctcctcccgcgttagaaccatatcccagggaacaacccattcctgaatcagcgtaaatcccacactgcagggaagacctcgcacgtaactcacgttgtgcattgtcaaagtgttacattcgggcagcagcggatgatcctccagtatggtagcgcgggtttctgtctcaaaaggaggtagacgatccctactgtacggagtgcgccgagacaaccgagatcgtgttggtcgtagtgtcatgccaaatggaacgccggacgtagtcat
Ad5 E2A: (SEQ ID NO: 3)
atggccagtcgggaagaggagcagcgcgaaaccacccccgagcgcggacgcggtgcggcgcgacgtcccccaaccatggaggacgtgtcgtccccgtccccgtcgccgccgcctccccgggcgcccccaaaaaagcggatgaggcggcgtatcgagtccgaggacgaggaagactcatcacaagacgcgctggtgccgcgcacacccagcccgcggccatcgacctcggcggcggatttggccattgcgcccaagaagaaaaagaagcgcccttctcccaagcccgagcgcccgccatcaccagaggtaatcgtggacagcgaggaagaaagagaagatgtggcgctacaaatggtgggtttcagcaacccaccggtgctaatcaagcatggcaaaggaggtaagcgcacagtgcggcggctgaatgaagacgacccagtggcgcgtggtatgcggacgcaagaggaagaggaagagcccagcgaagcggaaagtgaaattacggtgatgaacccgctgagtgtgccgatcgtgtctgcgtgggagaagggcatggaggctgcgcgcgcgctgatggacaagtaccacgtggataacgatctaaaggcgaacttcaaactactgcctgaccaagtggaagctctggcggccgtatgcaagacctggctgaacgaggagcaccgcgggttgcagctgaccttcaccagcaacaagacctttgtgacgatgatggggcgattcctgcaggcgtacctgcagtcgtttgcagaggtgacctacaagcatcacgagcccacgggctgcgcgttgtggctgcaccgctgcgctgagatcgaaggcgagcttaagtgtctacacggaagcattatgataaataaggagcacgtgattgaaatggatgtgacgagcgaaaacgggcagcgcgcgctgaaggagcagtctagcaaggccaagatcgtgaagaaccggtggggccgaaatgtggtgcagatctccaacaccgacgcaaggtgctgcgtgcacgacgcggcctgtccggccaatcagttttccggcaagtcttgcggcatgttcttctctgaaggcgcaaaggctcaggtggcttttaagcagatcaaggcttttatgcaggcgctgtatcctaacgcccagaccgggcacggtcaccttttgatgccactacggtgcgagtgcaactcaaagcctgggcacgcgccctttttgggaaggcagctaccaaagttgactccgttcgccctgagcaacgcggaggacctggacgcggatctgatctccgacaagagcgtgctggccagcgtgcaccacccggcgctgatagtgttccagtgctgcaaccctgtgtatcgcaactcgcgcgcgcagggcggaggccccaactgcgacttcaagatatcggcgcccgacctgctaaacgcgttggtgatggtgcgcagcctgtggagtgaaaacttcaccgagctgccgcggatggttgtgcctgagtttaagtggagcactaaacaccagtatcgcaacgtgtccctgccagtggcgcatagcgatgcgcggcagaacccctttgatttttaaacggcgcagacggcaagggtgggggtaaataatcacccgagagtgtacaaataaaagcatttgcctttattgaaagtgtctctagtacattatttttacatgtttttcaagtgacaaaaagaagtggcgctcctaatctgcgcactgtggctgcggaagtagggcgagtggcgctccaggaagctgtagagctgttcctggttgcgacgcagggtgggctgtacctggggactgttgagcatggagttgggtaccccggtaataaggttcatggtggggttgtgatccatgggagtttggggccagttggcaaaggcgtggagaaacatgcagcagaatagtccacaggcggccgagttgggcccctgtacgctttgggtggacttttccagcgttatacagcggtcgggggaagaagcaatggcgctacggcgcaggagtgactcgtactcaaactggtaaacctgcttgagtcgctggtcagaaaagccaaagggctcaaagaggtagcatgtttttgagtgcgggttccaggcaaaggccatccagtgtacgcccccagtctcg
Ad5 VA RNA: (SEQ ID NO: 4)
Cagaagcaccatgtccttgggtccggcctgctgaatgcgcaggcggtcggccatgccccaggcttcgttttgacatcggcgcaggtctttgtagtagtcttgcatgagcctttctaccggcacttcttcttctccttcctcttgtcctgcatctcttgcatctatcgctgcggcggcggcggagtttggccgtaggtggcgccctcttcctcccatgcgtgtgaccccgaagcccctcatcggctgaagcagggctaggtcggcgacaacgcgctcggctaatatggcctgctgcacctgcgtgagggtagactggaagtcatccatgtccacaaagcggtggtatgcgcccgtgttgatggtgtaagtgcagttggccataacggaccagttaacggtctggtgacccggctgcgagagctcggtgtacctgagacgcgagtaagccctcgagtcaaatacgtagtcgttgcaagtccgcaccaggtactggtatcccaccaaaaagtgcggcggcggctggcggtagaggggccagcgtagggtggccggggctccgggggcgagatcttccaacataaggcgatgatatccgtagatgtacctggacatccaggtgatgccggcggcggtggtggaggcgcgcggaaagtcgcggacgcggttccagatgttgcgcagcggcaaaaagtgctccatggtcgggacgctctggccggtcaggcgcgcgcaatcgttgacgctctagaccgtgcaaaaggagagcctgtaagcgggcactcttccgtggtctggtggataaattcgcaagggtatcatggcggacgaccggggttcgagccccgtatccggccgtccgccgtgatccatgcggttaccgcccgcgtgtcgaacccaggtgtgcgacgtcagacaacgggggagtgctccttttggcttccttccaggcgcggcggctgctgcgctagcttttttggccactggccgcgcgcagcgtaagcggttaggctggaaagcgaaagcattaagtggctcgctccctgtagccggagggttattttccaagggttgagtcgcgggacccccggttcgagtctcggaccggccggactgcggcgaacgggggtttgcctccccgtcatgcaagaccccgcttgcaaattcctccggaaacagggacgagcccctttttt
Claims (7)
1. The preservation number is CCTCC NO: human kidney epithelial cell 293-AH cells of C202338.
2. Use of the human kidney epithelial cell 293-AH cell of claim 1 for detecting viral titers of adeno-associated viruses.
3. The use of claim 2, wherein the adeno-associated virus is selected from AAV1, AAV2, AAV5, AAV6, AAV7, AAV8, or AAV9.
4. The use of claim 2, wherein the adeno-associated virus is a recombinant adeno-associated virus.
5. A kit for detecting the viral titer of an adeno-associated virus comprising the human kidney epithelial cell 293-AH cell of claim 1.
6. The kit for detecting the viral titer of an adeno-associated virus as claimed in claim 5, wherein the adeno-associated virus is selected from AAV1, AAV2, AAV5, AAV6, AAV7, AAV8 or AAV9.
7. The kit for detecting the viral titer of an adeno-associated virus as claimed in claim 5 or 6, wherein the adeno-associated virus is a recombinant adeno-associated virus.
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CN1657632A (en) * | 2004-11-30 | 2005-08-24 | 华中科技大学同济医学院附属同济医院 | Combination adeno-associated virus of expression human CYP2J2 antigene and its preparation method |
CN1834255A (en) * | 2005-12-23 | 2006-09-20 | 上海交通大学附属第一人民医院 | Method of fast increasing glandular related virus mediating gene in expression of inside of retina cell |
CN112280801A (en) * | 2020-10-30 | 2021-01-29 | 武汉枢密脑科学技术有限公司 | Method and kit for rAAV infection titer detection by plasmid assistance |
CN112912506A (en) * | 2018-10-17 | 2021-06-04 | 葛兰素史克知识产权开发有限公司 | Adeno-associated virus vector producing cell lines |
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CN1657632A (en) * | 2004-11-30 | 2005-08-24 | 华中科技大学同济医学院附属同济医院 | Combination adeno-associated virus of expression human CYP2J2 antigene and its preparation method |
CN1834255A (en) * | 2005-12-23 | 2006-09-20 | 上海交通大学附属第一人民医院 | Method of fast increasing glandular related virus mediating gene in expression of inside of retina cell |
CN112912506A (en) * | 2018-10-17 | 2021-06-04 | 葛兰素史克知识产权开发有限公司 | Adeno-associated virus vector producing cell lines |
CN112280801A (en) * | 2020-10-30 | 2021-01-29 | 武汉枢密脑科学技术有限公司 | Method and kit for rAAV infection titer detection by plasmid assistance |
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