CN116240261A - Kit for detecting activity of SHP2 inhibitor in PBMC and method thereof - Google Patents
Kit for detecting activity of SHP2 inhibitor in PBMC and method thereof Download PDFInfo
- Publication number
- CN116240261A CN116240261A CN202310150481.3A CN202310150481A CN116240261A CN 116240261 A CN116240261 A CN 116240261A CN 202310150481 A CN202310150481 A CN 202310150481A CN 116240261 A CN116240261 A CN 116240261A
- Authority
- CN
- China
- Prior art keywords
- shp2 inhibitor
- detecting
- pbmc
- csf
- erk
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 210000003819 peripheral blood mononuclear cell Anatomy 0.000 title claims abstract description 94
- 102100033019 Tyrosine-protein phosphatase non-receptor type 11 Human genes 0.000 title claims abstract description 87
- 101710116241 Tyrosine-protein phosphatase non-receptor type 11 Proteins 0.000 title claims abstract description 87
- 239000003112 inhibitor Substances 0.000 title claims abstract description 77
- 238000000034 method Methods 0.000 title claims abstract description 39
- 230000000694 effects Effects 0.000 title claims abstract description 37
- 102000004457 Granulocyte-Macrophage Colony-Stimulating Factor Human genes 0.000 claims abstract description 51
- 108010017213 Granulocyte-Macrophage Colony-Stimulating Factor Proteins 0.000 claims abstract description 51
- 230000026731 phosphorylation Effects 0.000 claims abstract description 23
- 238000006366 phosphorylation reaction Methods 0.000 claims abstract description 23
- 230000005764 inhibitory process Effects 0.000 claims abstract description 21
- 239000003153 chemical reaction reagent Substances 0.000 claims abstract description 6
- 210000004027 cell Anatomy 0.000 claims description 38
- 239000000523 sample Substances 0.000 claims description 17
- 238000005119 centrifugation Methods 0.000 claims description 13
- 238000001514 detection method Methods 0.000 claims description 11
- 239000013592 cell lysate Substances 0.000 claims description 10
- 238000011534 incubation Methods 0.000 claims description 10
- 239000008188 pellet Substances 0.000 claims description 7
- 239000013068 control sample Substances 0.000 claims description 6
- 230000009089 cytolysis Effects 0.000 claims description 6
- 239000006166 lysate Substances 0.000 claims description 6
- 238000002156 mixing Methods 0.000 claims description 6
- 239000006228 supernatant Substances 0.000 claims description 6
- 238000012360 testing method Methods 0.000 claims description 4
- 239000013049 sediment Substances 0.000 claims description 3
- 230000002934 lysing effect Effects 0.000 claims 1
- 102000007665 Extracellular Signal-Regulated MAP Kinases Human genes 0.000 abstract description 43
- 108010007457 Extracellular Signal-Regulated MAP Kinases Proteins 0.000 abstract description 43
- 206010028980 Neoplasm Diseases 0.000 abstract description 16
- 230000008859 change Effects 0.000 abstract description 6
- 238000001356 surgical procedure Methods 0.000 abstract description 4
- 230000000638 stimulation Effects 0.000 description 13
- 210000004369 blood Anatomy 0.000 description 11
- 239000008280 blood Substances 0.000 description 11
- 102000027426 receptor tyrosine kinases Human genes 0.000 description 8
- 108091008598 receptor tyrosine kinases Proteins 0.000 description 8
- 210000005259 peripheral blood Anatomy 0.000 description 5
- 239000011886 peripheral blood Substances 0.000 description 5
- 108090000623 proteins and genes Proteins 0.000 description 5
- 108010046938 Macrophage Colony-Stimulating Factor Proteins 0.000 description 4
- 102000007651 Macrophage Colony-Stimulating Factor Human genes 0.000 description 4
- 230000004913 activation Effects 0.000 description 4
- 238000003776 cleavage reaction Methods 0.000 description 4
- 229940079593 drug Drugs 0.000 description 4
- 239000003814 drug Substances 0.000 description 4
- 238000002474 experimental method Methods 0.000 description 4
- 230000008014 freezing Effects 0.000 description 4
- 238000007710 freezing Methods 0.000 description 4
- 230000035772 mutation Effects 0.000 description 4
- 102000004169 proteins and genes Human genes 0.000 description 4
- 230000007017 scission Effects 0.000 description 4
- 230000019491 signal transduction Effects 0.000 description 4
- 108010017080 Granulocyte Colony-Stimulating Factor Proteins 0.000 description 3
- 102000004269 Granulocyte Colony-Stimulating Factor Human genes 0.000 description 3
- 201000011510 cancer Diseases 0.000 description 3
- 230000001143 conditioned effect Effects 0.000 description 3
- 230000002401 inhibitory effect Effects 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 230000004048 modification Effects 0.000 description 3
- 238000012986 modification Methods 0.000 description 3
- 210000005087 mononuclear cell Anatomy 0.000 description 3
- 239000002244 precipitate Substances 0.000 description 3
- 102000043136 MAP kinase family Human genes 0.000 description 2
- 108091054455 MAP kinase family Proteins 0.000 description 2
- 102000007607 Non-Receptor Type 11 Protein Tyrosine Phosphatase Human genes 0.000 description 2
- 108010032107 Non-Receptor Type 11 Protein Tyrosine Phosphatase Proteins 0.000 description 2
- 102100040678 Programmed cell death protein 1 Human genes 0.000 description 2
- 101710089372 Programmed cell death protein 1 Proteins 0.000 description 2
- 238000011161 development Methods 0.000 description 2
- 230000000857 drug effect Effects 0.000 description 2
- 230000005284 excitation Effects 0.000 description 2
- 238000002955 isolation Methods 0.000 description 2
- 239000012139 lysis buffer Substances 0.000 description 2
- 230000037361 pathway Effects 0.000 description 2
- 238000004321 preservation Methods 0.000 description 2
- 238000011002 quantification Methods 0.000 description 2
- 230000001105 regulatory effect Effects 0.000 description 2
- 238000011160 research Methods 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 238000012546 transfer Methods 0.000 description 2
- 238000005406 washing Methods 0.000 description 2
- UCJZOKGUEJUNIO-IINYFYTJSA-N (3S,4S)-8-[6-amino-5-(2-amino-3-chloropyridin-4-yl)sulfanylpyrazin-2-yl]-3-methyl-2-oxa-8-azaspiro[4.5]decan-4-amine Chemical compound C[C@@H]1OCC2(CCN(CC2)C2=CN=C(SC3=C(Cl)C(N)=NC=C3)C(N)=N2)[C@@H]1N UCJZOKGUEJUNIO-IINYFYTJSA-N 0.000 description 1
- 102000008096 B7-H1 Antigen Human genes 0.000 description 1
- 108010074708 B7-H1 Antigen Proteins 0.000 description 1
- 206010009944 Colon cancer Diseases 0.000 description 1
- 208000001333 Colorectal Neoplasms Diseases 0.000 description 1
- 102000004127 Cytokines Human genes 0.000 description 1
- 108090000695 Cytokines Proteins 0.000 description 1
- 206010051066 Gastrointestinal stromal tumour Diseases 0.000 description 1
- 206010062016 Immunosuppression Diseases 0.000 description 1
- 102000019149 MAP kinase activity proteins Human genes 0.000 description 1
- 108040008097 MAP kinase activity proteins Proteins 0.000 description 1
- 206010061534 Oesophageal squamous cell carcinoma Diseases 0.000 description 1
- -1 Phospho Chemical class 0.000 description 1
- 102000004160 Phosphoric Monoester Hydrolases Human genes 0.000 description 1
- 108090000608 Phosphoric Monoester Hydrolases Proteins 0.000 description 1
- 102000002727 Protein Tyrosine Phosphatase Human genes 0.000 description 1
- 239000012980 RPMI-1640 medium Substances 0.000 description 1
- 102000014400 SH2 domains Human genes 0.000 description 1
- 108050003452 SH2 domains Proteins 0.000 description 1
- 208000000102 Squamous Cell Carcinoma of Head and Neck Diseases 0.000 description 1
- 208000036765 Squamous cell carcinoma of the esophagus Diseases 0.000 description 1
- 210000001744 T-lymphocyte Anatomy 0.000 description 1
- 239000012190 activator Substances 0.000 description 1
- 208000037844 advanced solid tumor Diseases 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 230000033228 biological regulation Effects 0.000 description 1
- 230000015572 biosynthetic process Effects 0.000 description 1
- 210000000170 cell membrane Anatomy 0.000 description 1
- 230000004663 cell proliferation Effects 0.000 description 1
- 239000003795 chemical substances by application Substances 0.000 description 1
- 230000001276 controlling effect Effects 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 238000005336 cracking Methods 0.000 description 1
- 230000003247 decreasing effect Effects 0.000 description 1
- 230000007547 defect Effects 0.000 description 1
- 230000001419 dependent effect Effects 0.000 description 1
- 238000006209 dephosphorylation reaction Methods 0.000 description 1
- 208000007276 esophageal squamous cell carcinoma Diseases 0.000 description 1
- 201000011243 gastrointestinal stromal tumor Diseases 0.000 description 1
- 230000005283 ground state Effects 0.000 description 1
- 201000000459 head and neck squamous cell carcinoma Diseases 0.000 description 1
- 230000001506 immunosuppresive effect Effects 0.000 description 1
- 230000000415 inactivating effect Effects 0.000 description 1
- 238000011835 investigation Methods 0.000 description 1
- 239000007788 liquid Substances 0.000 description 1
- 210000004698 lymphocyte Anatomy 0.000 description 1
- 239000003550 marker Substances 0.000 description 1
- 238000005259 measurement Methods 0.000 description 1
- 230000007246 mechanism Effects 0.000 description 1
- 239000002906 medical waste Substances 0.000 description 1
- 238000002844 melting Methods 0.000 description 1
- 230000008018 melting Effects 0.000 description 1
- 210000001616 monocyte Anatomy 0.000 description 1
- 208000002154 non-small cell lung carcinoma Diseases 0.000 description 1
- 238000011275 oncology therapy Methods 0.000 description 1
- DCWXELXMIBXGTH-QMMMGPOBSA-N phosphonotyrosine Chemical group OC(=O)[C@@H](N)CC1=CC=C(OP(O)(O)=O)C=C1 DCWXELXMIBXGTH-QMMMGPOBSA-N 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 230000009145 protein modification Effects 0.000 description 1
- 230000009822 protein phosphorylation Effects 0.000 description 1
- 108020000494 protein-tyrosine phosphatase Proteins 0.000 description 1
- 238000000197 pyrolysis Methods 0.000 description 1
- 239000002994 raw material Substances 0.000 description 1
- 102000005962 receptors Human genes 0.000 description 1
- 108020003175 receptors Proteins 0.000 description 1
- 238000012216 screening Methods 0.000 description 1
- 150000003384 small molecules Chemical class 0.000 description 1
- 239000000021 stimulant Substances 0.000 description 1
- 238000006467 substitution reaction Methods 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 208000029729 tumor suppressor gene on chromosome 11 Diseases 0.000 description 1
- 238000011144 upstream manufacturing Methods 0.000 description 1
- 230000009750 upstream signaling Effects 0.000 description 1
Classifications
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/5005—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells
- G01N33/5008—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics
- G01N33/5044—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving human or animal cells for testing or evaluating the effect of chemical or biological compounds, e.g. drugs, cosmetics involving specific cell types
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2500/00—Screening for compounds of potential therapeutic value
- G01N2500/10—Screening for compounds of potential therapeutic value involving cells
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Biomedical Technology (AREA)
- Immunology (AREA)
- Hematology (AREA)
- Cell Biology (AREA)
- Chemical & Material Sciences (AREA)
- Urology & Nephrology (AREA)
- Molecular Biology (AREA)
- Toxicology (AREA)
- Physics & Mathematics (AREA)
- Biotechnology (AREA)
- Tropical Medicine & Parasitology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Food Science & Technology (AREA)
- Medicinal Chemistry (AREA)
- Microbiology (AREA)
- Analytical Chemistry (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- General Physics & Mathematics (AREA)
- Pathology (AREA)
- Investigating Or Analysing Biological Materials (AREA)
Abstract
The invention relates to a kit for detecting SHP2 inhibitor activity in PBMC and a method thereof, wherein the kit comprises a stimulator GM-CSF and a reagent for detecting total ERK and phosphorylated ERK. The invention finds a proper stimulator GM-CSF which can promote the phosphorylation signal of ERK in PBMC in a larger window, and can sensitively reflect the inhibition effect of an SHP2 inhibitor on phosphorylated ERK by detecting the change of the phosphorylation level of ERK protein so as to indirectly evaluate the activity of the SHP2 inhibitor. Solves one pain point in the study of SHP2 inhibitor solid tumor: namely, how to monitor the efficacy of the SHP2 inhibitor conveniently and timely without surgery or puncture of tumor tissue.
Description
Technical Field
The invention belongs to the technical field of biological medicines, relates to a kit for detecting the activity of an SHP2 inhibitor in PBMC (peripheral blood mononuclear cells, peripheral blood mononuclear cell) and a method thereof, and particularly relates to a kit for detecting the inhibition rate of the SHP2 inhibitor in PBMC on ERK (extracellular signal-regulated kinase) phosphorylation and a method thereof.
Background
SHP2 is known as Src homology 2 domain-containing protein tyrosine phosphatase and is encoded by the gene PTPN 11. The activity of SHP2 phosphatase is regulated and controlled by the change of the conformation of the SHP2 phosphatase, and in the ground state, the N-SH2 domain is combined with the PTP domain and directly blocks the active site of the PTP domain, so that the self-inhibition conformation is maintained; upstream receptor tyrosine kinase (Receptor Tyrosine Kinase, RTK) activation triggers binding of the pTyr residues on the upstream signaling factor to both SH2 domains of SHP2, altering the conformation of SHP2, exposing the active site on the PTP domain, releasing SHP2 from the self-inhibiting state. SHP2 acts downstream of various RTKs, mediating cascade activation of downstream RAS/MAPK signaling pathways resulting from RTK activation. SHP2 is involved in post-dephosphorylation modification of proteins and plays an important role in a number of signaling pathways involved in controlling cancer progression. Cytokines and the like bind to receptors on the surface of the cell membrane, induce the formation of SHP-2 complex, and further activate RAS-RAF-MEK-ERK signaling pathway. In addition, almost all Receptor Tyrosine Kinases (RTKs) activate RAS in a major, and even the only, way to activate SHP 2. Preclinical studies have shown that decreasing SHP2 expression levels or inhibiting their phosphatase activity significantly inhibits MAPK signaling pathway activity as well as cell proliferation in a variety of cancer cells, particularly in RTK-dependent or cancers that carry RAS pathway specific mutations (e.g., KRASG12C mutations, BRAFClass3 mutations, NF1 inactivating mutations, etc.). In addition, SHP2 acts downstream of PD-1 in T cells, mediating tumor immunosuppression resulting from activation of the PD-L1/PD-1 pathway. Therefore, SHP2 can promote the occurrence and development of tumors by regulating multiple mechanisms, and the development of selective SHP2 small molecule inhibitors is expected to treat various cancers.
SHP2 inhibitors are commonly used in cancer therapy, and thus most of their research is focused on advanced solid tumors such as non-small cell lung cancer, head and neck squamous cell carcinoma, esophageal squamous cell carcinoma, gastrointestinal stromal tumor and colorectal cancer, and how to go to them conveniently and to be able to monitor the efficacy of SHP2 inhibitors in time becomes a difficulty, because it is relatively difficult to obtain fresh tumor tissue clinically at different administration time points, and is painful for patients to frequently operate or puncture. Thus, researchers have generally suggested indirect methods such as drawing human peripheral blood and isolating mononuclear cells to indirectly assess the effect of SHP2 inhibitors by assessing the level of ERK protein phosphorylation in PBMCs.
However, since in solid tumors, human peripheral blood PBMCs belong to a normal tissue relative to cancer tissue, the level of ERK phosphorylation in normal PBMCs is very low, substantially below the detection limit achievable by many current detection means.
Therefore, how to accurately evaluate the activity of the SHP2 inhibitor in the PBMC, so that the efficacy of the SHP2 inhibitor can be conveniently and timely monitored under the condition of no surgery or puncture of tumor tissue, is still a problem to be solved by the technicians in the field,
disclosure of Invention
Aiming at the defects of the prior art, the invention aims to provide a kit for detecting the activity of an SHP2 inhibitor in PBMC and a method thereof, in particular to a kit for detecting the inhibition rate of the SHP2 inhibitor in PBMC to ERK phosphorylation and a method thereof.
In order to achieve the aim of the invention, the invention adopts the following technical scheme:
in a first aspect, the invention provides a kit for detecting SHP2 inhibitor activity in PBMC, the kit comprises a stimulator GM-CSF (granulocyte-macrophage colony stimulating factor) and a reagent for detecting total ERK and phosphorylated ERK.
The invention creatively discovers that the stimulator GM-CSF can obviously improve the background signal of ERK phosphorylation in PBMC, and simultaneously makes the SHP2 inhibitor sensitive to the signal so as to fully inhibit, thus the inhibition rate of the SHP2 inhibitor to ERK phosphorylation is estimated by comparing the signal value changes before and after administration, and the drug effect is indirectly estimated.
In a second aspect, the present invention provides a method of detecting SHP2 inhibitor activity in PBMCs, the method comprising detecting using a kit as described in the first aspect, comprising in particular the steps of:
mixing a PBMC sample to be tested with a stimulator GM-CSF, incubating, centrifuging, collecting PBMC cell sediment, splitting, detecting ERK total signal value and phosphorylated ERK signal value in the splitting solution, and calculating the ratio of phosphorylated ERK;
the same procedure as for the PBMC test sample was performed on the PBMC control sample containing no SHP2 inhibitor;
according to the detection results of the sample to be detected and the control sample, the inhibition rate of the SHP2 inhibitor on ERK phosphorylation is calculated, and the higher the inhibition rate is, the stronger the activity of the SHP2 inhibitor in the sample to be detected is.
Preferably, the ratio of PBMC to GM-CSF in the mixed system is (0.5-5). Times.10 7 Individual cells/(1-100 ng).
The above (0.5-5). Times.10 7 Specific values in individual cells, e.g. 5X 10 6 Individual cells, 8×10 6 Individual cells, 1×10 7 Individual cells, 1×10 7 Individual cells, 1.5X10 7 Individual cells, 2×10 7 Individual cells, 2.5X10 7 Individual cells, 3×10 7 Individual cells, 3.5X10 7 Individual cells, 4×10 7 Individual cells, 4.5X10 7 Individual cells, 5×10 7 Individual cells, etc.
Specific values in the above (1-100) ng are, for example, 1ng, 5ng, 10ng, 20ng, 30ng, 40ng, 50ng, 60ng, 70ng, 80ng, 90ng, 100ng, etc.
Preferably, the ratio of PBMC to GM-CSF in the mixed system is (2-5). Times.10 7 Individual cells/(10-100 ng).
Preferably, the incubation temperature is 10-30 ℃, e.g., 10 ℃,15 ℃, 20 ℃,25 ℃,30 ℃, etc.
Preferably, the incubation time is 3-8min, e.g., 3min, 3.5min, 4min, 4.5min, 5min, 5.5min, 6min, 6.5min, 7min, 7.5min, 8min, etc.
The incubation time may be selected to be within the above range, and if too long, the signal values will decay, and too short will not be stimulated.
Preferably, the speed of the centrifugation is 300-800g, e.g. 300g, 350g, 400g, 450g, 500g, 550g, 600g, 650g, 700g, 750g, 800g etc. for a period of 1-5min, e.g. 1min, 1.5min, 2min, 2.5min, 3min, 3.5min, 4min, 4.5min, 5min etc.
Preferably, the centrifugation is performed at 10-30 ℃, e.g., 10 ℃,15 ℃, 20 ℃,25 ℃,30 ℃, etc.
Preferably, the cleavage specifically comprises: the cell pellet was mixed with the cell lysate.
Preferably, the mixing in the cleavage is performed at 0℃to 4℃such as 0℃1℃2℃3℃4℃for 20 minutes or more such as 20 minutes, 25 minutes, 30 minutes, 35 minutes, 40 minutes, 45 minutes, 50 minutes, 55 minutes, 60 minutes and the like.
Preferably, the method further comprises centrifuging at 10000-15000g for 8-15min, and collecting supernatant to obtain lysate.
Specific values among 10000 to 15000g are 10000g, 10500g, 11000g, 11500g, 12000g, 12500g, 13000g, 13500g, 14000g, 14500g, 15000g, and the like.
The specific value of the above 8-15min is 8min, 9min, 10min, 11min, 12min, 13min, 14min, 15min, etc.
Preferably, the centrifugation in the collection lysate is performed at 0-8 ℃, e.g. 0 ℃,1 ℃,2 ℃,3 ℃,4 ℃,5 ℃, 6 ℃, 7 ℃, 8 ℃ etc.
In a third aspect, the present invention provides a method of using a kit for detecting SHP2 inhibitor activity in PBMCs according to the first aspect, the method of using comprising:
mixing a PBMC sample to be tested with a stimulator GM-CSF, incubating, centrifuging, collecting PBMC cell sediment, splitting, detecting ERK total signal value and phosphorylated ERK signal value in the splitting solution, and calculating the ratio of phosphorylated ERK;
the same procedure as for the PBMC test sample was performed on the PBMC control sample containing no SHP2 inhibitor;
according to the detection results of the sample to be detected and the control sample, the inhibition rate of the SHP2 inhibitor on ERK phosphorylation is calculated, and the higher the inhibition rate is, the stronger the activity of the SHP2 inhibitor in the sample to be detected is.
Preferably, the ratio of PBMC to GM-CSF in the mixed system is (0.5-5). Times.10 7 Individual cells/(1-100 ng).
Preferably, the ratio of PBMC to GM-CSF in the mixed system is (2-5). Times.10 7 Individual cells/(10-100 ng).
Preferably, the temperature of the incubation is 10-30 ℃.
Preferably, the incubation time is 3-8min.
Preferably, the speed of centrifugation is 300-800g for 1-5min.
Preferably, the cleavage specifically comprises: the cell pellet was mixed with the cell lysate.
Preferably, the mixing in the cleavage is performed at 0℃to 4℃for more than 20 min.
Preferably, the method further comprises centrifuging at 10000-15000g for 8-15min, and collecting supernatant to obtain lysate.
The numerical ranges recited herein include not only the recited point values, but also any point values between the recited numerical ranges that are not recited, and are limited to, and for the sake of brevity, the invention is not intended to be exhaustive of the specific point values that the recited range includes.
Compared with the prior art, the invention has the following beneficial effects:
the present invention creatively discovers a suitable stimulator GM-CSF and a corresponding stimulation method, which can promote ERK phosphorylation in PBMCs within a larger window, and simultaneously, the SHP2 inhibitor is sensitive to the signal, so as to fully inhibit the signal. Therefore, by detecting the change of the phosphorylation level of the ERK protein, the inhibition effect of the SHP2 inhibitor on the phosphorylated ERK can be reflected very sensitively, so that the activity of the SHP2 inhibitor can be estimated indirectly.
The kit and the method can be used for directly detecting the activity of the SHP2 inhibitor (namely the inhibition rate of the SHP2 inhibitor on ERK phosphorylation) in the PBMC, wherein the PBMC can be extracted by any conventional method in the art, and therefore, the kit and the method can be applied to basic research related to the SHP2 inhibitor and ERK phosphorylation. In addition, the kit and the method can monitor the drug effect of the SHP2 inhibitor by collecting blood of a patient and separating PBMC, and solve one pain point in the study of the SHP2 inhibitor solid tumor: namely, how to monitor the efficacy of the SHP2 inhibitor conveniently and timely without surgery or puncture of tumor tissue.
Detailed Description
In order to further describe the technical means adopted by the present invention and the effects thereof, the following describes the technical scheme of the present invention in combination with the preferred embodiments of the present invention, but the present invention is not limited to the scope of the embodiments.
In the following exploration experiments and examples, all reagents and consumables were purchased from the conventional reagent manufacturers in the art unless specifically stated otherwise; unless otherwise indicated, all methods and techniques used are those conventional in the art.
GM-CSF is available from R & D SYSTEMS under the trade designation 215-GM;
SHP2 inhibitor TNO155 was purchased from Selleck China under the trade designation S8987.
Investigation experiment
(1) The signal value excitation condition of different stimulators on ERK phosphorylation and the inhibition result of the SHP2 inhibitor on the ERK phosphorylation signal value are explored:
test stimulants were selected: PMA, M-CSF, GM-CSF, G-CSF, then divided into 3-4 groups: blank PBMC group (PBMC), PBMC plus SHP2 inhibitor group (pbmc+shp2i 40nm,2 h), PBMC plus stimulator group, PBMC plus SHP2 inhibitor plus stimulator group. pERK (phosphorylated ERK, phospho-ERK) and Total-ERK (Total ERK) were simultaneously detected by ECL-MSD kit, and the results are shown in tables 1-5.
TABLE 1 PMA stimulators and SHP2 inhibitors
Note that: the sample loading amount of the experimental group is larger, so the background signal value is higher.
Table 2.M-CSF stimulators and SHP2 inhibitors
TABLE 3G-CSF stimulators and SHP2 inhibitors
TABLE 4 GM-CSF stimulators and SHP2 inhibitors
TABLE 5 PMA+GM-CSF stimulators and SHP2 inhibitors
From the detection results in the above tables, it can be seen that: the inhibitory effect of SHP2 inhibitors on ERK phosphorylation was undetectable without the addition of stimulators. Of the various stimulators, only the stimulators GM-CSF and PMA were able to stimulate a large window of change in pERK signal values, but the PMA-stimulated pERK signal values were not inhibited by the SHP2 inhibitor, with an inhibition rate of 0%. And pERK signal value after GM-CSF stimulation can be inhibited by SHP2 inhibitor, and inhibition rate can be up to 97%. The pERK stimulation signal values of the M-CSF and the G-CSF are lower, and the inhibition rate can reach about 44% -48%. In addition, as shown in Table 5, experiments using PMA and GM-CSF in combination were also performed in this example, and it was found that the signal value of pERK was able to be stimulated effectively, but the inhibition rate after the addition of SHP2 inhibitor did not reach the inhibition effect of GM-CSF, only 40.449%, probably because SHP2 inhibitor inhibited only the phosphorylation by GM-CSF stimulator, and the phosphorylation by PMA stimulator was not inhibited, and the results were consistent with those of the PMA stimulator alone. Thus, in combination, GM-CSF was chosen to be most suitable as the stimulator in the SHP2 inhibitor study.
(2) Concentration selection of GM-CSF stimulators
PBMC were first isolated from human peripheral blood and then conditioned to a cell density of 1X 10 7 /mL, then divided into 6 groups: blank PBMC (PBMC), PBMC-added GM-CSF stimulant 1ng/mL, PBMC-added GM-CSF stimulant 5ng/mL, PBMC-added GM-CSF stimulant 10ng/mL, PBMC-added GM-CSF stimulant 50ng/mL, PBMC-added GM-CSF stimulantThe excitation agent is 100ng/mL, each group is stimulated for 5min, and then the subsequent operations such as centrifugation and cracking are carried out. pERK and Total ERK were finally detected simultaneously by ECL-MSD kit, the results are shown in Table 6.
TABLE 6 GM-CSF stimulators at different concentrations
The results show that GM-CSF stimulators are able to stimulate ERK phosphorylation at lower concentrations, with a 9.2 increase in phosphorylated ERK, but at 50ng/mL the signal value of pERK is highest. Thus, subsequent experiments used a concentration of 50ng/mL to stimulate PBMC.
(3) Cell density selection of PBMC
PBMCs were first isolated from human peripheral blood and then conditioned to different cell densities: 3X 10 7 /mL、2×10 7 /mL、1×10 7 /mL、5×10 6 Per mL, each cell density group was then divided into 3 groups: blank PBMC (0), PBMC with 50ng/mL of GM-CSF stimulator after SHP2 inhibitor, and GM-CSF for 5min were subjected to subsequent centrifugation and lysis. pERK and Total ERK were finally detected simultaneously by ECL-MSD kit, and the results are shown in Table 7.
TABLE 7 cell densities of different PBMC
The results show that: when the cell density of PBMC was 5.0X10 6 In the above cases, the signal value of pERK can meet the requirements. But the cell density reached 2.0X10 7 Or above, the signal value of pERK increases more significantly, and the fold change of pERK can be 23 times or more. Thus, it is suggested that PBMC cell densities for GM-CSF stimulation treatment may be at 2.0X10 7 at/mL or above, more pronounced pERK results can be obtained.
(4) Comparison of different preservation modes after PBMC sample collection stimulation
PBMC were first isolated from human peripheral blood and then conditioned to a cell density of 2X 10 7 /mL, then divided into 3 groups: blank PBMC group (0), PBMC adding GM-CSF stimulant 50ng/mL, PBMC adding SHP2 inhibitor and GM-CSF stimulant 50ng/mL, GM-CSF stimulation for 5min, then subsequent centrifugation, separation of the centrifuged PBMC precipitate into 2 kinds of operation modes, freezing the PBMC cell precipitate directly at-80 ℃ or-20 ℃ in one kind of refrigerator, direct lysis of the PBMC precipitate in the other kind of refrigerator, and freezing the obtained cell lysate at-80 ℃ or-20 ℃. pERK and Total ERK were finally detected simultaneously by ECL-MSD kit, the results are shown in Table 8.
Table 8 comparison of different modes of preservation after stimulation of PBMC sample collection
From the above results, it was found that the signal value of pERK cleaved immediately after the PBMC sample collection treatment (GM-CSF) was the highest, the signal value of PBMC lysate could not be reduced by freezing at-20℃or-80℃for 2 weeks, and the signal value obtained by re-lysing the PBMC cell pellet frozen at-20℃was significantly reduced. The freezing storage at the temperature of minus 80 ℃ has little influence. Therefore, after the PBMC are collected and separated, the stimulation of GM-CSF is carried out as soon as possible, and then the GM-CSF is cracked as soon as possible, and the obtained cell lysate is frozen for detection; PBMC cell pellets can also be frozen at-80 ℃ and lysed within 2 weeks.
Example 1
Whole blood of healthy volunteers is selected and divided into a plurality of groups, SHP2 inhibitors with different concentrations are added to simulate the drugs to enter human blood, and then pERK detection is carried out according to the method of the invention to evaluate the effect of the SHP2 inhibitors. The following are specific operational steps.
Whole blood incubation with SHP2 inhibitor
Whole blood of healthy volunteers was collected using EDTAK2 anticoagulated blood collection tubes, and then divided into 10 groups of 4mL of whole blood on average, and SHP2 inhibitor was added at concentrations of 0nM, 0.013nM, 0.064nM, 0.32nM, 1.6nM, 8.0nM, 40nM, 200nM, 1000nM, respectively, and incubated at 37℃for 2 hours. While a set of whole blood without any reagent was left as a control.
PBMC isolation and GM-CSF stimulation and lysis
2.1 PBMC isolation
Whole blood after incubation of the drug and control group were transferred to a mononuclear cell separation tube (i.e., CPT tube, BD company), placed in a horizontal rotor (out-opening head) centrifuge, carefully balanced, for 180 g,25 min,25 ℃ and centrifuged without brake (i.e., slow ramp).
After centrifugation, the mononuclear cells will be in the white layer, next to the upper plasma layer. The 2/3 of the upper plasma was carefully aspirated using a Pasteur pipette, taking care not to destroy the underlying cell layer. The upper plasma layer can be disposed of according to the regulations related to biomedical waste. A new Pasteur pipette is then carefully removed to transfer the white layer of cells (lymphocytes and monocytes) into a 15mL pointed centrifuge tube, and the corresponding sample information is marked on the tube wall with a marker.
PBMC washing: at least 10 PBMC volumes of PBS solution were added each time 300g,15min,25 ℃. Washing at least 2 times.
Transfer of PBMCs: after centrifugation, the supernatant was carefully and as much as possible aspirated without the cell pellet being blown up. Cells were resuspended using 200 μl of resuspension (RPMI 1640+10% fbs, ensuring that room temperature had been restored (10 ℃ -30 ℃) and cell counted and transferred to 1 1.5mL centrifuge tubes.
2.2 stimulation of PBMC by GM-CSF
Stimulation of PBMC: mu.L of the stimulator GM-CSF (5. Mu.g/mL) was added to 200. Mu.L of PBMC resuspension (cell density ca. 2.0X10) 7 The final concentration of the stimulator is 50ng/mL, the mixture is immediately blown and evenly mixed, and the mixture is incubated for 5 minutes at room temperature (10 ℃ C. -30 ℃ C.) (the incubation time is strictly controlled).
Immediately, the PBMC suspension was centrifuged using a centrifuge in a 1.5mL centrifuge tube at 500g for 3 minutes at 18℃to 25 ℃. The supernatant was removed as much as possible after centrifugation was complete (ensuring that less than 20. Mu.L of liquid remained on the cell pellet).
2.3 lysis of PBMC
After centrifugation, 100. Mu.L of cell lysate (MSD Complete Lysis Buffer) was immediately added, and the mixture was stirred and homogenized on ice for at least 30 minutes.
After the completion of the pyrolysis, a 1.5mL centrifuge tube is centrifuged at 12000g,10min and 4 ℃, the supernatant is transferred to a new tube, marked and stored in a refrigerator at-65 ℃ to-90 ℃ for standby.
2.4BCA method protein quantification
Taking out the cell lysate from the refrigerator at the temperature of between 65 ℃ below zero and 90 ℃ below zero, melting the cell lysate on wet ice, and detecting the protein concentration of each group by using the BCA protein quantitative kit. The purpose is to adjust the loading amounts of each group in ERK detection to be consistent.
3pERK and Total ERK detection
The whole lysate after protein quantification was diluted to a concentration of 1mg/mL using the cell lysate (MSD Complete Lysis Buffer).
Detection was performed according to the instructions of the MSD kit Phospho/Total ERK1/2Whole Cell Lysate Kit (MSD; CAT#. K15107D).
4. Interpretation and description of results
The pERK and Total ERK measurements (Table 9) show that GM-CSF is able to significantly stimulate the pERK signal values in PBMC up to 14-fold. In addition, the SHP2 inhibitor can inhibit pERK stimulation signal value caused by GM-CSF at different concentrations in whole blood, and the pERK inhibition rate also tends to decrease along with the decrease of the drug concentration, and the result is good in linearity.
TABLE 9 inhibition of SHP2 inhibitors at various concentrations in whole blood
In summary, the invention provides a suitable stimulator GM-CSF and a corresponding method, which can effectively evaluate the efficacy of SHP2 inhibitors by detecting the change in the phosphorylation level of ERK protein. And solves one difficulty: i.e. how to go to a solid tumor and to be able to monitor the efficacy of SHP2 inhibitors in a timely manner, is relatively difficult to obtain fresh tumor tissue clinically at different administration time points, and is painful for the patient to frequently perform surgery or puncture. Thus, the present invention employs an indirect method to indirectly evaluate the effect of SHP2 inhibitors by evaluating the efficacy of phosphorylation of ERK proteins in PBMCs.
The invention finally finds the GM-CSF and the corresponding stimulation method by screening several potential stimulators (such as PKC activators PMA, colony stimulating factors M-CSF, G-CSF and GM-CSF), which can raise the phosphorylation level of ERK in PBMC in a larger window and can sensitively reflect the inhibition effect of SHP2 inhibitors on phosphorylated ERK.
The applicant states that the present invention is illustrated by the above examples as a kit and method for detecting SHP2 inhibitor activity in PBMCs, but the invention is not limited to, i.e. it is not meant that the invention must be practiced in dependence upon the above examples. It should be apparent to those skilled in the art that any modification of the present invention, equivalent substitution of raw materials for the product of the present invention, addition of auxiliary components, selection of specific modes, etc., falls within the scope of the present invention and the scope of disclosure.
The preferred embodiments of the present invention have been described in detail above, but the present invention is not limited to the specific details of the above embodiments, and various simple modifications can be made to the technical solution of the present invention within the scope of the technical concept of the present invention, and all the simple modifications belong to the protection scope of the present invention.
In addition, the specific features described in the above embodiments may be combined in any suitable manner, and in order to avoid unnecessary repetition, various possible combinations are not described further.
Claims (10)
1. A kit for detecting SHP2 inhibitor activity in PBMCs, comprising the stimulator GM-CSF and reagents for detecting total ERK and phosphorylated ERK.
2. A method for detecting SHP2 inhibitor activity in PBMCs, said method comprising the step of detecting using the kit of claim 1, comprising in particular the steps of:
mixing a PBMC sample to be tested with a stimulator GM-CSF, incubating, centrifuging, collecting PBMC cell sediment, splitting, detecting ERK total signal value and phosphorylated ERK signal value in the splitting solution, and calculating the ratio of phosphorylated ERK;
the same procedure as for the PBMC test sample was performed on the PBMC control sample containing no SHP2 inhibitor;
according to the detection results of the sample to be detected and the control sample, the inhibition rate of the SHP2 inhibitor on ERK phosphorylation is calculated, and the higher the inhibition rate is, the stronger the activity of the SHP2 inhibitor in the sample to be detected is.
3. The method of detecting SHP2 inhibitor activity in PBMCs according to claim 2, wherein the ratio of PBMCs to GM-CSF in the mixed system is (0.5-5) x 10 7 Individual cells/(1-100 ng).
4. The method of detecting SHP2 inhibitor activity in PBMCs according to claim 3, wherein the ratio of PBMCs to GM-CSF in the mixed system is (2-5) x 10 7 Individual cells/(10-100 ng).
5. The method of detecting SHP2 inhibitor activity in PBMCs according to any one of claims 2 to 4, wherein the incubation is at a temperature of 10 to 30 ℃.
6. The method of detecting SHP2 inhibitor activity in PBMCs according to any one of claims 2 to 5, wherein the incubation is for a period of 3 to 8 minutes.
7. The method of detecting SHP2 inhibitor activity in PBMCs according to any one of claims 2 to 6, wherein the centrifugation is at a speed of 300 to 800g for a period of 1 to 5 minutes.
8. The method of detecting SHP2 inhibitor activity in PBMCs according to any one of claims 2 to 7, wherein the lysing specifically comprises: the cell pellet was mixed with the cell lysate.
9. The method of detecting SHP2 inhibitor activity in PBMCs of claim 8, wherein the mixing during lysis is performed at 0 ℃ to 4 ℃ for more than 20 minutes.
10. The method of detecting SHP2 inhibitor activity in PBMCs according to any one of claims 2 to 9, further comprising centrifugation at 10000 to 15000g for 8 to 15min after the lysis, and collecting the supernatant as a lysate.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202310150481.3A CN116240261A (en) | 2023-02-22 | 2023-02-22 | Kit for detecting activity of SHP2 inhibitor in PBMC and method thereof |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202310150481.3A CN116240261A (en) | 2023-02-22 | 2023-02-22 | Kit for detecting activity of SHP2 inhibitor in PBMC and method thereof |
Publications (1)
Publication Number | Publication Date |
---|---|
CN116240261A true CN116240261A (en) | 2023-06-09 |
Family
ID=86634622
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN202310150481.3A Pending CN116240261A (en) | 2023-02-22 | 2023-02-22 | Kit for detecting activity of SHP2 inhibitor in PBMC and method thereof |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN116240261A (en) |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN116893265A (en) * | 2023-09-08 | 2023-10-17 | 军科正源(北京)药物研究有限责任公司 | Method and kit for detecting protein phosphorylation in PBMC and related applications |
Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20060269482A1 (en) * | 2005-05-25 | 2006-11-30 | Depinto Wanda E | Cyclin-dependent kinase inhibition of Rb phosphorylation |
US20140298498A1 (en) * | 2011-08-18 | 2014-10-02 | New York University | Inhibition of oncogenic kras-induced gm-csf production and function |
CN112501239A (en) * | 2020-12-14 | 2021-03-16 | 南通大学 | Detection method for PDL1 inhibited by TAK1 inhibitor and application of detection method in preparation of anti-PDL 1 drugs |
CN114929279A (en) * | 2020-01-07 | 2022-08-19 | 锐新医药公司 | Methods of administering SHP2 inhibitors and treating cancer |
-
2023
- 2023-02-22 CN CN202310150481.3A patent/CN116240261A/en active Pending
Patent Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20060269482A1 (en) * | 2005-05-25 | 2006-11-30 | Depinto Wanda E | Cyclin-dependent kinase inhibition of Rb phosphorylation |
US20140298498A1 (en) * | 2011-08-18 | 2014-10-02 | New York University | Inhibition of oncogenic kras-induced gm-csf production and function |
CN114929279A (en) * | 2020-01-07 | 2022-08-19 | 锐新医药公司 | Methods of administering SHP2 inhibitors and treating cancer |
CN112501239A (en) * | 2020-12-14 | 2021-03-16 | 南通大学 | Detection method for PDL1 inhibited by TAK1 inhibitor and application of detection method in preparation of anti-PDL 1 drugs |
Non-Patent Citations (3)
Title |
---|
ELSA QUINTANA等: "Allosteric Inhibition of SHP2 Stimulates Antitumor Immunity by Transforming the Immunosuppressive Environment", TUMOR BIOLOGY AND IMMUNOLOGY, vol. 80, pages 2891 * |
张薇;杨金莲;胡中倩;卢艳敏;储著朗;余科科;瞿成奎;汪思应;: "SHP-2酪氨酸磷酸酶激活突变导致小鼠髓系异常增殖", 中国病理生理杂志, no. 04, pages 682 - 687 * |
贺慧颖, 郑杰, 李燕, 衡万杰, 方伟岗: "SHP2和MKP5在P2Y嘌呤受体介导的人前列腺癌细胞侵袭中的调控机制研究", 中华病理学杂志, vol. 34, no. 05, 31 December 2005 (2005-12-31), pages 288 - 292 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN116893265A (en) * | 2023-09-08 | 2023-10-17 | 军科正源(北京)药物研究有限责任公司 | Method and kit for detecting protein phosphorylation in PBMC and related applications |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
Rosellini et al. | Prognostic and predictive biomarkers for immunotherapy in advanced renal cell carcinoma | |
Liu et al. | Regulation of p21 WAF1/CIP1 expression through mitogen-activated protein kinase signaling pathway | |
Wu et al. | COL11A1 confers chemoresistance on ovarian cancer cells through the activation of Akt/c/EBPβ pathway and PDK1 stabilization | |
Chen et al. | Activation and inhibition of the AP‐1 complex in human breast cancer cells | |
Cho et al. | Potential histologic and molecular predictors of response to temsirolimus in patients with advanced renal cell carcinoma | |
Beevers et al. | Curcumin disrupts the Mammalian target of rapamycin-raptor complex | |
DE69907155T2 (en) | CANCER TREATMENT | |
Pommier et al. | Targeting chk2 kinase: molecular interaction maps and therapeutic rationale | |
Brizzi et al. | Interleukin-3 stimulates migration and proliferation of vascular smooth muscle cells: a potential role in atherogenesis | |
CN116240261A (en) | Kit for detecting activity of SHP2 inhibitor in PBMC and method thereof | |
CN109072311A (en) | Diagnostic and therapeutic method for cancer | |
Cruceru et al. | Signal transduction molecule patterns indicating potential glioblastoma therapy approaches | |
ELmESALLAmy | Prognostic value of ALDH1, EZH2 and Ki-67 in astrocytic gliomas | |
Roadcap et al. | The role of mammalian coronins in development and disease | |
Garde Noguera et al. | Role of RAS mutation status as a prognostic factor for patients with advanced colorectal cancer treated with first‑line chemotherapy based on fluoropyrimidines and oxaliplatin, with or without bevavizumab: A retrospective analysis | |
EP1523571B1 (en) | Sgk and nedd used as diagnostic and therapeutic targets | |
Greenstein et al. | Adrenal tumors provide insight into the role of cortisol in NK cell activity | |
Massa et al. | The phosphotyrosine phosphatase η mediates somatostatin inhibition of glioma proliferation via the dephosphorylation of ERK1/2 | |
Vleugels et al. | ERK1/2 MAPKs and Wnt signaling pathways are independently involved in adipocytokine-mediated aldosterone secretion | |
Polozov et al. | Deficient radiation transcription response in COVID-19 patients | |
Liu et al. | Induction of functional MT1 and MT2 isoforms by calcium in anaplastic thyroid carcinoma cells | |
Wang et al. | High selectivity of PI3Kβ inhibitors in SETD2-mutated renal clear cell carcinoma | |
Anderson | Luminal A breast cancer resistance mechanisms and emerging treatments | |
Cornez et al. | EGF signalling and rapamycin-mediated mTOR inhibition in glioblastoma multiforme evaluated by phospho-specific flow cytometry | |
Zhang et al. | Negative role of cAMP‐dependent protein kinase A in RANTES‐mediated transcription of proinflammatory mediators through Raf |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination |