CN116004551A - Construction and application of porcine reproductive and respiratory syndrome virus live vaccine for regulating CIITA molecule - Google Patents
Construction and application of porcine reproductive and respiratory syndrome virus live vaccine for regulating CIITA molecule Download PDFInfo
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- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
- Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
- Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change
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Abstract
Description
技术领域technical field
本发明属于生物工程领域,具体地说,涉及一种病毒的突变质粒和基因工程疫苗,更具体地说,涉及一种能够增强早期适应性免疫应答并对猪繁殖与呼吸综合征病毒具有有效免疫保护的突变质粒和基因工程疫苗。The invention belongs to the field of bioengineering, in particular, relates to a mutant plasmid of a virus and a genetic engineering vaccine, more specifically, relates to a vaccine capable of enhancing early adaptive immune response and having effective immunity to porcine reproductive and respiratory syndrome virus Mutant plasmids and genetically engineered vaccines for protection.
背景技术Background technique
猪繁殖与呼吸综合征(PRRS),俗称为“蓝耳病”,在临床上引起仔猪出现呼吸系统障碍,母猪流产、产死胎的繁殖障碍,自1996年PRRS在我国爆发以来,给我国的养猪业造成了巨大的经济损失。猪繁殖与呼吸综合征病毒(PRRSV)属于套式病毒目,动脉炎病毒科,动脉炎病毒属。PRRSV的核酸系不分节段、单股、正链RNA,大小约为15kb,含8个开放阅读框(ORFs)。ORF1a和ORF1b约占整个基因组的三分之二,表达2个多聚蛋白pp1a和pp1ab后经过一系列的加工,剪切出12个病毒非结构蛋白(Nsps),这些非结构蛋白在病毒复制和基因表达中发挥至关重要的作用。其中,NSP4具有3C样丝氨酸蛋白酶活性(3CLSP),在病毒复制和免疫逃避中起着重要作用。Porcine Reproductive and Respiratory Syndrome (PRRS), commonly known as "PRRS", clinically causes respiratory disorders in piglets, reproductive disorders such as miscarriage and stillbirth in sows. Since the outbreak of PRRS in my country in 1996, my country's The pig industry has caused huge economic losses. Porcine reproductive and respiratory syndrome virus (PRRSV) belongs to the order Mandoviridae, the family Arteriviridae, and the genus Arterivirus. The nucleic acid of PRRSV is non-segmented, single-stranded, positive-strand RNA, about 15kb in size, containing 8 open reading frames (ORFs). ORF1a and ORF1b account for about two-thirds of the entire genome. After expressing two polyproteins pp1a and pp1ab, they undergo a series of processing and cut out 12 viral nonstructural proteins (Nsps). These nonstructural proteins are involved in viral replication and play an important role in gene expression. Among them, NSP4 has 3C-like serine protease activity (3CLSP), which plays an important role in virus replication and immune evasion.
目前,减毒活疫苗(MLV)免疫是符合我国国情和有效的预防PRRS的手段,但是PRRS减毒活疫苗在临床防控中仍存在一些问题,尤其PRRS疫苗免疫早期低效的体液(中和抗体)和细胞免疫应答是制约PRRS疫苗使用和干扰防控策略制定的一大难题。PRRS减毒活疫苗单次免疫后,能够迅速诱导机体产生高水平抗体反应,主要是针对N蛋白、GP5蛋白以及部分非结构蛋白(Nsp1α、Nsp1β、Nsp2和Nsp7)的特异性抗体,但前期的这些抗体不具备中和活性。中和抗体产生时间晚、水平低,低水平的中和抗体不足以保护猪只抵抗PRRSV攻击,同时,免疫后引起的细胞免疫也不活跃,而由PRRSV产生的免疫抑制,会引起猪流感病毒(SIV)、猪呼吸道冠状病毒(PRCV)、猪圆环病毒(PCV2)等其他病原微生物的继发感染或者共感染,共同感染的猪只表现出较单一病原体感染更为严重的临床症状和生长迟缓。研究发现虽然单次疫苗免疫后中和抗体产生时间晚,产生水平低,但是多次的重复免疫能够产生高水平中和抗体,而高水平的中和抗体可以提供有效的免疫保护。虽然PRRS疫苗已经投入使用近20年,PRRS疫苗免疫后的获得性免疫应答也得到了大量的研究,但是PRRS疫苗免疫保护机理依旧没有准确的答案,研究的迟滞依然制约着疫苗的研制和疫病防控策略的制定。At present, live attenuated vaccine (MLV) immunization is an effective means of preventing PRRS in line with my country's national conditions, but there are still some problems in the clinical prevention and control of PRRS live attenuated vaccine, especially the ineffective humoral (neutralizing Antibodies) and cellular immune responses are major problems restricting the use of PRRS vaccines and interfering with the formulation of prevention and control strategies. After a single immunization with live attenuated PRRS vaccine, it can rapidly induce high-level antibody responses in the body, mainly specific antibodies against N protein, GP5 protein and some non-structural proteins (Nsp1α, Nsp1β, Nsp2 and Nsp7). These antibodies do not have neutralizing activity. The production time of neutralizing antibody is late and the level is low. The low level of neutralizing antibody is not enough to protect pigs against PRRSV attack. At the same time, the cellular immunity caused by immunization is not active, and the immunosuppression produced by PRRSV will cause swine influenza virus (SIV), porcine respiratory coronavirus (PRCV), porcine circovirus (PCV2) and other pathogenic microorganisms secondary infection or co-infection, co-infected pigs showed more serious clinical symptoms and growth than single pathogen infection slow. Studies have found that although neutralizing antibodies are produced late and at low levels after a single vaccine immunization, repeated immunizations can produce high levels of neutralizing antibodies, and high levels of neutralizing antibodies can provide effective immune protection. Although the PRRS vaccine has been in use for nearly 20 years, and the acquired immune response after PRRS vaccine immunization has also been extensively studied, there is still no accurate answer to the immune protection mechanism of the PRRS vaccine, and the delay in research still restricts the development of vaccines and disease prevention. formulation of control strategies.
抗原递呈作为获得性免疫反应的起始,在病毒识别、抗原修饰加工和效应细胞激活等方面起着关键作用,树突状细胞(DC)作为主要的抗原递呈细胞是一系列过程得以实现的基础载体。对疫苗免疫后DC细胞抗递呈功能开展研究是揭示PRRS疫苗免疫后是否产生免疫抑制的关键,有望揭示疫苗免疫后体液(中和抗体)和细胞免疫应答水平低的原因,继而为全面揭示疫苗免疫保护机制和新型疫苗的改进提供理论支撑。本实验室前期试验结果表明,HuN4-F112疫苗株免疫猪14天后,外周血中CD4+T细胞数量显著低于对照组;HuN4-F112感染骨髓源分化的树突状细胞(BMDC)后,MHC-II类反式激活因子(CIITA)的转录水平被显著下调,提示PRRSV疫苗株可能通过调节CIITA分子干扰MHC-II类分子介导的抗原递呈,从而抑制机体免疫应答。As the initiation of the acquired immune response, antigen presentation plays a key role in virus recognition, antigen modification processing and effector cell activation. Dendritic cells (DC) as the main antigen-presenting cells are a series of processes to be realized base carrier. Research on the anti-presentation function of DC cells after vaccine immunization is the key to revealing whether PRRS vaccine produces immunosuppression, and it is expected to reveal the reasons for the low level of humoral (neutralizing antibody) and cellular immune responses after vaccine immunization, and then provide a comprehensive explanation for the vaccine. Improvements in immune protection mechanisms and new vaccines provide theoretical support. The preliminary test results of our laboratory showed that the number of CD4+ T cells in peripheral blood was significantly lower than that of the control group 14 days after HuN4-F112 vaccine strain immunized pigs; after HuN4-F112 infected bone marrow-derived dendritic cells (BMDC), MHC -The transcription level of class II transactivator (CIITA) was significantly down-regulated, suggesting that PRRSV vaccine strains may interfere with MHC-II-mediated antigen presentation by regulating CIITA molecules, thereby inhibiting the body's immune response.
CIITA是调控MHC-II类分子介导的抗原递呈的最主要蛋白。CIITA通过多种机制参与转录,例如招募转录因子TFIID、TFIIB到靶基因启动子区域,形成转录起始复合物;诱导RNA聚合酶II的磷酸化;与P-TEFb相互作用;招募可诱导组蛋白乙酰化或甲基化来改变染色质的激活剂;招募色素重构因子BRG1。CIITA的调控在未成熟和成熟的DC细胞中有所不同,在未成熟的DC细胞中受到PU.1、IRF8、NF-κB和SP1调控,在成熟DC细胞中受到PRDM1调控。CIITA的转录还受到上游因子CDCA3、RMND5B、CNOT1、MAPK1和PLEKHA4调控,同时需要磷酸化和泛素化实现其功能。磷酸化是指导CIITA核定位和增加反式活性的重要修饰,CIITA的翻译起始因子IF3上被鉴定出多种残基为磷酸化位点,Ser280是磷酸化活性位点的中心。一旦磷酸化,单泛素化随之而来,导致CIITA反式活性增加,MHC II类分子的转录随之增加,CIITA的赖氨酸残基Lys-315,Lys-330和Lys-333,以及磷酸化位点Ser-280,它们调节CIITA泛素化,稳定性和MHC II类表达,这种泛素化是K63连接的泛素化,它能够串联磷酸化增强CIITA的反式活性,并且对于CIITA从细胞质到细胞核的运动非常重要。而多泛素化会导致CIITA被泛素-蛋白酶体途径降解,CIITA的赖氨酸残基Lys-141和Lys-145调节CIITA的K48连锁泛素化修饰,导致CIITA被蛋白酶体识别和降解。多种微生物可通过对CIITA基因的干扰来逃避机体的免疫反应,例如HIV的转录激活蛋白通过与细胞周期蛋白T1结合,干扰CIITA的功能,以此来阻止MHC II类分子在HIV感染过程中的表达;幽门螺旋杆菌可通过抑制CIITA的表达抑制MHC-II表达,从而抑制抗原递呈;结核分枝杆菌通过产生19kDa的脂蛋白来抑制CIITA的功能,以达到逃避机体免疫反应的目的;CIITA通过激活恒定链CD74的p41亚型表达阻止组织蛋白酶介导的埃博拉糖蛋白加工来抑制病毒进入,还可阻断包括SARS-CoV-2在内的冠状病毒的内体进入途径。CIITA is the most important protein that regulates antigen presentation mediated by MHC-II molecules. CIITA participates in transcription through various mechanisms, such as recruiting transcription factors TFIID and TFIIB to the target gene promoter region to form a transcription initiation complex; inducing the phosphorylation of RNA polymerase II; interacting with P-TEFb; recruiting inducible histones Activator that alters chromatin by acetylation or methylation; recruits pigment remodeling factor BRG1. The regulation of CIITA differs between immature and mature DCs, being regulated by PU.1, IRF8, NF-κB, and SP1 in immature DCs and by PRDM1 in mature DCs. The transcription of CIITA is also regulated by upstream factors CDCA3, RMND5B, CNOT1, MAPK1 and PLEKHA4, and requires phosphorylation and ubiquitination to realize its function. Phosphorylation is an important modification to guide the nuclear localization of CIITA and increase trans-activity. Various residues on the translation initiation factor IF3 of CIITA have been identified as phosphorylation sites, and Ser280 is the center of the phosphorylation active site. Once phosphorylated, monoubiquitination ensues, resulting in increased CIITA transactivity and subsequent increased transcription of MHC class II molecules, the lysine residues Lys-315, Lys-330 and Lys-333 of CIITA, and Phosphorylation site Ser-280, which regulates CIITA ubiquitination, stability and MHC class II expression, this ubiquitination is K63-linked ubiquitination, which enables tandem phosphorylation to enhance the trans activity of CIITA, and for The movement of CIITA from the cytoplasm to the nucleus is very important. While polyubiquitination will lead to the degradation of CIITA by the ubiquitin-proteasome pathway, the lysine residues Lys-141 and Lys-145 of CIITA regulate the K48-linked ubiquitination modification of CIITA, resulting in the recognition and degradation of CIITA by the proteasome. A variety of microorganisms can evade the body's immune response by interfering with the CIITA gene. For example, HIV's transcriptional activator protein interferes with the function of CIITA by binding to cyclin T1, thereby preventing the MHC class II molecules from being released during HIV infection. expression; Helicobacter pylori can inhibit the expression of MHC-II by inhibiting the expression of CIITA, thereby inhibiting antigen presentation; Mycobacterium tuberculosis inhibits the function of CIITA by producing 19kDa lipoprotein, so as to achieve the purpose of evading the body's immune response; CIITA through Activating expression of the p41 isoform of the invariant chain CD74 prevents cathepsin-mediated processing of the Ebola glycoprotein to inhibit viral entry and also blocks the endosomal entry pathway of coronaviruses including SARS-CoV-2.
自PRRS首次出现以来,全世界的科学家就对PRRS疫苗开展了研究,众多的数据显示:PRRS灭活疫苗和亚单位疫苗均无法为猪只提供完全的免疫保护,只有PRRS减毒活疫苗能够有效保护猪只抵抗同源PRRSV的攻击,而Nsp4作为一个保守的非结构蛋白,突变后容易使病毒致死,且Nsp4并不是中和抗原,因而在疫苗方面对Nsp4的研究较少。本专利针对PRRS疫苗免疫后引起的低水平体液(中和抗体)和细胞免疫应答的实际问题,发现HuN4-F112免疫后14天,外周血中CD4+T细胞数量显著降低,继而发现调控MHC-II类分子抗原递呈途径的关键基因CIITA的转录水平被显著下调,提示PRRSV疫苗株可能通过调节CIITA分子干扰抗原递呈,从而抑制机体免疫应答。进一步研究表明Nsp4能够在剪切CIITA的同时,通过泛素蛋白酶体途径降解CIITA,199位点是抑制CIITA的关键位点,V199D的突变病毒能够一定程度降低疫苗株感染骨髓源树突状细胞后对CIITA的抑制作用,从而恢复MHC-II类分子介导的抗原递呈途径。与其他已知的商业化的疫苗相比,该改良疫苗株在免疫早期降低了PRRSV的免疫抑制特性,保证其免疫原性的同时提升了其安全性,在生产上有助于对免疫程序的制定。Since PRRS first appeared, scientists all over the world have carried out research on PRRS vaccines. Numerous data show that neither inactivated PRRS vaccines nor subunit vaccines can provide complete immune protection for pigs, and only live attenuated PRRS vaccines can be effective. Protect pigs against homologous PRRSV attack, and Nsp4 is a conserved non-structural protein, which is easy to kill the virus after mutation, and Nsp4 is not a neutralizing antigen, so there are few studies on Nsp4 in vaccines. This patent aims at the practical problems of low-level humoral (neutralizing antibody) and cellular immune response caused by PRRS vaccine immunization. It is found that 14 days after HuN4-F112 immunization, the number of CD4+ T cells in peripheral blood is significantly reduced, and then it is found that the regulation of MHC- The transcription level of CIITA, a key gene in the antigen presentation pathway of class II molecules, was significantly down-regulated, suggesting that PRRSV vaccine strains may interfere with antigen presentation by regulating CIITA molecules, thereby inhibiting the body's immune response. Further studies have shown that Nsp4 can degrade CIITA through the ubiquitin-proteasome pathway while cleaving CIITA. The 199 site is the key site for inhibiting CIITA. Inhibition of CIITA restores the MHC-II-mediated antigen presentation pathway. Compared with other known commercialized vaccines, the improved vaccine strain reduces the immunosuppressive properties of PRRSV in the early stage of immunization, ensures its immunogenicity and improves its safety, and contributes to the improvement of the immunization program in production. formulate.
发明内容Contents of the invention
本发明的目的在于,提供一种基于对PRRSV调控CIITA的机制研究,能够有效提高猪繁殖与呼吸综合征疫苗免疫早期体液免疫水平和细胞免疫水平的病毒突变质粒的构建方法。The object of the present invention is to provide a method for constructing a viral mutant plasmid that can effectively improve the early humoral immunity level and cellular immunity level of porcine reproductive and respiratory syndrome vaccine immunization based on the mechanism research on PRRSV regulation of CIITA.
本发明建立了PRRSV全基因组上Nsp4突变的突变质粒构建方法。根据HuN4-F112基因组中含Nsp4片段的单酶切位点位置以及Nsp4调控CIITA的关键氨基酸位点位置,分别设计HuN4-F112全基因组分段PCR扩增引物以及Nsp4上的关键氨基酸定点突变引物。在获得HuN4-F112全基因组包含Nsp4在内的基因组突变序列后,与含pBluescript SK(+)载体全基因组的分段序列进行T4连接,构建HuN4-F112全基因组转录调控序列的突变质粒pBlue-V199D。The invention establishes a mutant plasmid construction method for Nsp4 mutation on the whole PRRSV genome. According to the position of the single restriction site of the Nsp4 fragment in the HuN4-F112 genome and the position of the key amino acid site of Nsp4 regulating CIITA, the PCR amplification primers of the whole genome of HuN4-F112 and the key amino acid site-directed mutagenesis primers of Nsp4 were designed respectively. After obtaining the genomic mutant sequence of the whole genome of HuN4-F112 including Nsp4, T4 ligation was performed with the segmented sequence of the whole genome of the pBluescript SK(+) vector to construct the mutant plasmid pBlue-V199D of the transcriptional regulatory sequence of the whole genome of HuN4-F112 .
本发明的Nsp4调控CIITA的关键氨基酸位点的突变PRRSV质粒的构建方法:首先通过设计的全基因组分段扩增引物扩增获得HuN4-F112全基因组包含Nsp4在内的序列片段;然后通过该片段与中间载体连接后利用定点突变引物将Nsp4中的Val199位点进行定点突变;最后将Nsp4已成功突变的基因组片段通过T4连接,连接到经SpeI和PmeI双酶切的不包含Nsp4的另一段全长基因组上。经过鉴定筛选成功进行全长连接的质粒,转化Top10感受态细胞,提取质粒后进行全长测序,得到只有Nsp4目的位点突变其他位置均无突变的Nsp4关键位点突变全长感染性克隆质粒pBlue-V199D,从而建立了相应的方法。The method for constructing the mutant PRRSV plasmid of the key amino acid site that Nsp4 regulates CIITA of the present invention: first obtain the sequence fragment of the whole genome of HuN4-F112 including Nsp4 by amplifying the designed whole genome segmental amplification primers; then pass the fragment After ligation with the intermediate vector, site-directed mutagenesis was performed at the Val199 site in Nsp4 using site-directed mutagenesis primers; finally, the genomic fragment that had been successfully mutated in Nsp4 was ligated to another complete segment that did not contain Nsp4 and was double-digested with SpeI and PmeI. on the long genome. After identification and screening of the successful full-length ligated plasmid, transform Top10 competent cells, extract the plasmid and carry out full-length sequencing, and obtain a full-length infectious clone plasmid pBlue with Nsp4 key site mutation and no mutation in other positions. -V199D, thus establishing the corresponding method.
使用本发明构建的Nsp4突变质粒pBlue-V199D,经线性化、体外转录、转染MARC-145细胞后,将包装好的病毒在Marc-145细胞上继续传代,盲传三代即可检测到成功拯救出的Nsp4 V199D突变毒。Using the Nsp4 mutant plasmid pBlue-V199D constructed by the present invention, after linearization, in vitro transcription, and transfection into MARC-145 cells, the packaged virus was continued to pass on Marc-145 cells, and successful rescue was detected after three generations of blind passage. The Nsp4 V199D mutant virus produced.
所述一种调节CIITA分子的猪繁殖与呼吸综合征病毒Nsp4 V199D,Nsp4 V199D的全长序列如SEQ ID NO.1所示;The porcine reproductive and respiratory syndrome virus Nsp4 V199D that regulates the CIITA molecule, the full-length sequence of Nsp4 V199D is shown in SEQ ID NO.1;
进一步的,本发明提供一种调节CIITA分子的猪繁殖与呼吸综合征病毒Nsp4V199D的应用,所述应用为制备治疗或者预防猪繁殖与呼吸综合征病毒的试剂盒的用途,其用于制备药剂、优选地疫苗;Further, the present invention provides an application of porcine reproductive and respiratory syndrome virus Nsp4V199D that regulates CIITA molecules. The application is the use of a kit for preparing treatment or prevention of porcine reproductive and respiratory syndrome virus, which is used for the preparation of medicaments, preferably a vaccine;
进一步的,本发明提供一种免疫原性组合物或组合疫苗或组合,其包括调节CIITA分子的猪繁殖与呼吸综合征病毒Nsp4 V199D,可选的,加入药学上可以接受的载体。Further, the present invention provides an immunogenic composition or combined vaccine or combination, which includes porcine reproductive and respiratory syndrome virus Nsp4 V199D that regulates CIITA molecules, and optionally, a pharmaceutically acceptable carrier is added.
附图说明Description of drawings
图1是不同PRRSV非结构蛋白在转录水平和蛋白水平对CIITA的影响。Figure 1 shows the effects of different PRRSV nonstructural proteins on CIITA at the transcriptional and protein levels.
图2是以F112为骨架的点突变Nsp4在转录水平和蛋白水平对CIITA的影响,His39、Asp64、Ser118是NSP4蛋白酶的关键酶活性位点,酶活性位点突变后的弱毒NSP4不再具有功能,199位点是Nsp4抑制CIITA的关键位点,V199L和V199P与V199D效果相似,而V199G和V199F似乎在减弱对CIITA抑制能力的同时失去了剪切CIITA的能力。Figure 2 is the effect of point mutation Nsp4 with F112 as the backbone on CIITA at the transcriptional and protein levels. His39, Asp64, and Ser118 are the key enzyme active sites of NSP4 protease. The attenuated NSP4 after the enzyme active site mutation no longer has functions , 199 site is the key site for Nsp4 to inhibit CIITA, V199L and V199P have similar effects to V199D, while V199G and V199F seem to lose the ability to cleave CIITA while weakening the ability to inhibit CIITA.
图3是抑制剂方法解析Nsp4对CIITA修饰路径的结果,Nsp4能够通过蛋白酶体途径降解CIITA。Figure 3 is the result of analyzing the modification path of CIITA by Nsp4 by the inhibitor method, and Nsp4 can degrade CIITA through the proteasome pathway.
图4是NSP4与CIITA相互作用和共定位的检测结果,所有的突变NSP4均与CIITA直接互作,CIITA与NSP4及其突变质粒在293T细胞核中共定位。Figure 4 shows the detection results of the interaction and colocalization of NSP4 and CIITA. All mutant NSP4 interacted directly with CIITA, and CIITA colocalized with NSP4 and its mutant plasmids in the nucleus of 293T cells.
图5是最终筛选构建成功的Nsp4点突变F112感染性克隆全长基因组质粒的鉴定电泳结果图。Fig. 5 is a diagram of the identification electrophoresis results of the full-length genome plasmid of the Nsp4 point mutation F112 infectious clone successfully constructed in the final screening.
图6是拯救毒盲传到第三代后提取细胞上清中病毒RNA反转录成cDNA,用绝对荧光定量PCR检测N蛋白,得到的拯救毒拷贝数的检测结果。Fig. 6 is the detection result of the copy number of the rescued virus obtained by reverse-transcribing the viral RNA in the cell supernatant extracted from the rescued virus to the third generation after the blind passage of the rescued virus into cDNA, and detecting the N protein by absolute fluorescent quantitative PCR.
图7是拯救毒感染Marc-145细胞48小时做的间接免疫荧光的结果。Figure 7 is the result of indirect immunofluorescence performed on Marc-145 cells infected with rescue virus for 48 hours.
图8是对拯救病毒与亲本毒的滴度变化比较,绘制的多步生长曲线。Figure 8 is a comparison of the titer changes between the rescued virus and the parental virus, and a multi-step growth curve drawn.
图9是V199D突变病毒感染骨髓源树突状细胞的转录水平检测结果,在12h及24h的时间点,V199D组的CIITA转录水平能够显著提高,CIITA的上游调控因子SP1,在24h能够显著提高。Figure 9 shows the detection results of the transcription level of bone marrow-derived dendritic cells infected by the V199D mutant virus. At the time point of 12h and 24h, the transcription level of CIITA in the V199D group can be significantly increased, and the upstream regulator SP1 of CIITA can be significantly increased at 24h.
具体实施方式Detailed ways
在本发明中,所述的Nsp4点突变PRRSV质粒指的是,利用反向遗传技术,将高致病性PRRSV传代致弱株HuN4-F112基因组中的Nsp4的关键位点进行突变,该突变点能够在保持Nsp4正常功能的情况下对CIITA不造成严重抑制,该突变质粒为pBlue-V199D。In the present invention, the Nsp4 point mutation PRRSV plasmid refers to the use of reverse genetic technology to mutate the key site of Nsp4 in the genome of the highly pathogenic PRRSV passage weakened strain HuN4-F112, the mutation point The mutant plasmid is pBlue-V199D, which can not seriously inhibit CIITA while maintaining the normal function of Nsp4.
在本发明中,所述Nsp4点突变的病毒是指,利用基因组定点突变技术所获得的全长Nsp4突变质粒pBlue-V199D转染Marc-145细胞后拯救的活病毒V199D。In the present invention, the Nsp4 point-mutated virus refers to the live virus V199D rescued after transfecting Marc-145 cells with the full-length Nsp4 mutant plasmid pBlue-V199D obtained by genome site-directed mutagenesis technology.
在本发明中,所述的反向遗传操作是指,在获得的高致病性PRRSV弱毒疫苗株HuN4-F112的感染性克隆骨架上,通过将全长基因组分段后对Nsp4的碱基进行定点突变,再对突变的HuN4-F112全长感染性克隆进行重新构建,使该感染性克隆装配出具有生物活性的病毒粒子,研究该突变病毒与亲本病毒在病毒生物学特性上的变化,以及该Nsp4突变的PRRSV弱毒株对CIITA的影响,以及对疫苗免疫后体液(中和抗体)和细胞免疫应答的影响。In the present invention, the reverse genetic operation refers to, on the infectious clone backbone of the obtained highly pathogenic PRRSV attenuated vaccine strain HuN4-F112, the base of Nsp4 is carried out after the full-length genome is segmented. Site-directed mutagenesis, and then rebuild the mutant HuN4-F112 full-length infectious clone, so that the infectious clone can assemble biologically active virus particles, and study the changes in the biological characteristics of the mutant virus and the parent virus, and The impact of the Nsp4 mutated PRRSV attenuated strain on CIITA, and the impact on humoral (neutralizing antibody) and cellular immune responses after vaccine immunization.
在本发明中,所述的高致病性猪繁殖与呼吸综合征病毒HuN4的Genbank登录号是EF635006。In the present invention, the Genbank accession number of the highly pathogenic porcine reproductive and respiratory syndrome virus HuN4 is EF635006.
在本发明中,所述高致病性猪繁殖与呼吸综合征病毒弱毒疫苗株的感染性克隆HuN4-F112指的是,参考文献ShanruZhang,YanjunZhou,Yifeng Jiang,Guoxin Li,LipingYan,Hai Yu,Guangzhi Tong.Generation of an infectious clone of HuN4-F112,anattenuated live vaccine strain of porcine reproductive and respiratorysyndrome virus的方法所构建的感染性克隆。In the present invention, the infectious clone HuN4-F112 of the highly pathogenic porcine reproductive and respiratory syndrome virus attenuated vaccine strain refers to, references Shanru Zhang, Yanjun Zhou, Yifeng Jiang, Guoxin Li, Liping Yan, Hai Yu, Guangzhi The infectious clone constructed by the method of Tong.Generation of an infectious clone of HuN4-F112, anattenuated live vaccine strain of porcine reproductive and respiratory syndrome virus.
以下结合具体实施例,对本发明作进一步说明。应理解,以下实施例仅用于说明本发明而非用于限定本发明的范围。The present invention will be further described below in conjunction with specific embodiments. It should be understood that the following examples are only used to illustrate the present invention but not to limit the scope of the present invention.
下列实施例中未注明具体条件的实验方法,通常按照常规条件,如《分子克隆:实验室手册》(New York:Cold Spring Harbor Laboratory Press,1989)中所述的条件进行。The experimental methods in the following examples that do not specify specific conditions are usually carried out according to conventional conditions, such as the conditions described in "Molecular Cloning: A Laboratory Manual" (New York: Cold Spring Harbor Laboratory Press, 1989).
在本发明的实施例中,使用的细胞系是Marc-145细胞(非洲绿猴肾细胞系);使用的载体是pBluescript SK(+)载体(购自Invitrogen公司);使用的感受态是TOP10感受态细胞(购自TIANGENE公司);使用的酶是SpeI-HF、PmeI-HF、T4 DNA Ligase(购自NEB公司)、PrimeSTAR HS DNA Polymerase(购自TAKARA公司)、金牌Mix(green)(购自全式金公司);试剂盒QIAquick PCR Purification Kit、QIAprep Spin Miniprep Kit、RNeasy Kits、QIAamp Viral RNA Mini Kit(购自QIAGENE公司)、mMESSAGE mMACHINETM SP6(购自Invitrogen公司);转染试剂DMRIE-C购自(购自Thermo Fisher公司);培养基Opti-MEM、DMEM(购自Gibco公司)。In an embodiment of the present invention, the cell line used is Marc-145 cells (African green monkey kidney cell line); the carrier used is pBluescript SK (+) carrier (purchased from Invitrogen); the competent state used is TOP10 competent State cells (purchased from TIANGENE Company); the enzymes used are SpeI-HF, PmeI-HF, T4 DNA Ligase (purchased from NEB Company), PrimeSTAR HS DNA Polymerase (purchased from TAKARA Company), Gold Mix (green) (purchased from Quanshijin Company); kits QIAquick PCR Purification Kit, QIAprep Spin Miniprep Kit, RNeasy Kits, QIAamp Viral RNA Mini Kit (purchased from QIAGENE Company), mMESSAGE mMACHINETM SP6 (purchased from Invitrogen Company); transfection reagent DMRIE-C purchased from From (purchased from Thermo Fisher Company); medium Opti-MEM, DMEM (purchased from Gibco Company).
在本发明的实施例中,Nsp4点突变的HuN4-F112突变质粒的构建是根据HuN4-F112基因组中含Nsp4片段的单酶切位点位置以及前期研究中获得的Nsp4调控CIITA的关键氨基酸位点位置,分别设计HuN4-F112全基因组分段PCR扩增引物以及Nsp4上的关键氨基酸定点突变引物。在获得HuN4-F112全基因组包含Nsp4在内的基因组突变序列后,与含pBluescript SK(+)载体全基因组的分段序列进行T4连接,构建HuN4-F112全基因组转录调控序列的突变质粒pBlue-V199D。具体过程如下:In the embodiment of the present invention, the construction of the HuN4-F112 mutant plasmid with Nsp4 point mutation is based on the position of the single restriction site containing the Nsp4 fragment in the HuN4-F112 genome and the key amino acid site of Nsp4 regulating CIITA obtained in previous studies The PCR amplification primers of HuN4-F112 whole genome segment and the key amino acid site-directed mutagenesis primers on Nsp4 were designed respectively. After obtaining the genomic mutant sequence of the whole genome of HuN4-F112 including Nsp4, T4 ligation was performed with the segmented sequence of the whole genome of the pBluescript SK(+) vector to construct the mutant plasmid pBlue-V199D of the transcriptional regulatory sequence of the whole genome of HuN4-F112 . The specific process is as follows:
1.1引物设计1.1 Primer design
根据NSP4在HuN4-F112全长感染性克隆上的位置和基因组中的单酶切位点的位置,设计PCR扩增引物以及定点突变引物。其序列分别如下:According to the position of NSP4 on the HuN4-F112 full-length infectious clone and the position of the single restriction site in the genome, PCR amplification primers and site-directed mutagenesis primers were designed. The sequences are as follows:
pBlue-F:GGTCGACGGTATCGATAACTAGTGGAAACCTGAACTTTCAACAAAG(SEQ ID NO.2)pBlue-F: GGTCGACGGTATCGATAACTAGTGGAAACCTGAACTTTCAACAAAG (SEQ ID NO. 2)
pBlue-R:TCTAGAACTAGTGGATCGCTAGCAGTTTAAACACTGCTCCTTAGTC(SEQ ID NO.3)pBlue-R: TCTAGAACTAGTGGATCGCTAGCAGTTTAAACACTGCTCCTTAGTC (SEQ ID NO. 3)
V199D-F:CCCTGCTTGCTGACAAACCCGAACTGGAA(SEQ ID NO.4)V199D-F: CCCTGCTTGCTGACAAACCCGAACTGGAA (SEQ ID NO.4)
V199D-R:AGTTCGGGTTTGTCAGCAAGCAGGGCACAAAGATCTGAAG(SEQ ID NO.5)V199D-R: AGTTCGGGTTTGTCAGCAAGCAAGCAGGGCACAAAGATCTGAAG (SEQ ID NO. 5)
具体构建步骤如下:The specific construction steps are as follows:
1.2扩增PRRSV基因组分段产物1.2 Amplification of PRRSV Genome Segmentation Products
以pHuN4-F112作为模板,引物pBlue-F、pBlue-R分别作为上游引物和下游引物,用PCR扩增基因组含Nsp4的分段序列,具体如下:Using pHuN4-F112 as a template, primers pBlue-F and pBlue-R were used as upstream primers and downstream primers respectively, and PCR was used to amplify the segmented sequence containing Nsp4 in the genome, as follows:
PCR反应体系为:pHuN4-F112质粒(1:1000稀释)为模板1μL,上下游引物(10μM)各1μL,5×PrimeSTAR Buffer 10μL,dNTP Mixture 4μL,PrimeSTAR HS DNA Polymerase(2.5U/μL)0.5μL,加水至50μL。The PCR reaction system is: pHuN4-F112 plasmid (diluted 1:1000) as
PCR反应参数为:95℃预变性5min,95℃变性30s,60℃退火30s,72℃延伸2min,共进行40个循环,然后72℃延伸5min。The PCR reaction parameters were: pre-denaturation at 95°C for 5 min, denaturation at 95°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 2 min, and a total of 40 cycles, followed by extension at 72°C for 5 min.
取PCR反应产物,用1%琼脂糖凝胶电泳检测,对产物进行胶回收,再用同源重组的方法连接到载体pBluescript SK(+)上。The PCR reaction product was taken, detected by 1% agarose gel electrophoresis, the product was gel recovered, and then connected to the vector pBluescript SK(+) by homologous recombination.
1.3定点突变Nsp4关键位点1.3 Site-directed mutation of Nsp4 key sites
在1.2中构建的PRRSV基因组分段质粒上,用引物V199D-F、V199D-R,通过定点突变PCR将Nsp4的199位点氨基酸突变为天冬氨酸,具体操作如下:On the fragmented PRRSV genome plasmid constructed in 1.2, use primers V199D-F and V199D-R to mutate the amino acid at position 199 of Nsp4 into aspartic acid by site-directed mutagenesis PCR. The specific operations are as follows:
PCR反应体系为:PRRSV基因组分段质粒为模板1μL,上下游引物对(10μM)各1μL,5×PrimeSTAR Buffer 10μL,dNTP Mixture 4μL,PrimeSTAR HS DNA Polymerase(2.5U/μL)0.5μL,加水至50μL(每个样品体系各做两个)。The PCR reaction system is: PRRSV genome segmented plasmid as
PCR反应参数为:95℃预变性5min,95℃变性30s,60℃退火30s,72℃延伸2min,共进行40个循环,然后72℃延伸5min。The PCR reaction parameters were: pre-denaturation at 95°C for 5 min, denaturation at 95°C for 30 s, annealing at 60°C for 30 s, extension at 72°C for 2 min, and a total of 40 cycles, followed by extension at 72°C for 5 min.
取共100μL PCR反应产物,加入200μL无水乙醇混匀后静置10min,在4℃、12000rpm的条件下离心10min后弃上清。用20μL体系的DpnI悬起,反应体系为ddH2O 17μL,CutsmartBuffer 2μL,DpnI酶1μL,在37℃水浴反应3h,在Top10感受态细胞中进行目的质粒扩增,并送往上海擎科生物科技有限公司进行测序验证,筛选出成功突变的质粒,留作备用。Take a total of 100 μL of PCR reaction products, add 200 μL of absolute ethanol to mix, let stand for 10 min, centrifuge at 4°C and 12000 rpm for 10 min, and discard the supernatant. Suspend with 20 μL of DpnI, the reaction system is 17 μL of ddH 2 O, 2 μL of CutsmartBuffer, 1 μL of DpnI enzyme, react in a water bath at 37°C for 3 hours, and amplify the target plasmid in Top10 competent cells, and send it to Shanghai Qingke Biotechnology Co., Ltd. Co., Ltd. conducts sequencing verification, screens out the plasmids that have successfully mutated, and reserves them for future use.
1.4 Nsp4点突变感染性克隆构建1.4 Nsp4 point mutation infectious clone construction
将1.3中测序正确的突变质粒和pHuN4-F112全长感染性克隆质粒通过SpeI和PmeI双酶切,得到包含Nsp4突变的基因组片段和全长上不包含Nsp4的另一段。胶回收后测得片段浓度,按照1:1用T4连接将两段连接起来,T4连接的反应条件是16℃过夜连接,连接产物用Top10感受态转化,用氨苄LB板涂板,12小时后挑菌筛选阳性菌落。菌落筛选时使用金牌Mix(green)做菌液PCR,筛选出阳性菌落后提取质粒,通过1%琼脂糖凝胶电泳,与阳性pHuN4-F112质粒对照,比对条带大小一致(如图1所示)后测序,筛选得到Nsp4点突变PRRSV阳性克隆质粒。The mutant plasmid sequenced correctly in 1.3 and the full-length infectious cloning plasmid pHuN4-F112 were digested with SpeI and PmeI to obtain a genomic fragment containing the Nsp4 mutation and another fragment not containing Nsp4 in its full length. After the gel was recovered, the fragment concentration was measured, and the two segments were connected by T4 connection according to 1:1. The reaction condition of T4 connection was to connect overnight at 16°C. Pick bacteria to screen positive colonies. During colony screening, gold medal Mix (green) was used to do bacterium liquid PCR, and after positive colonies were screened out, plasmids were extracted, electrophoresed through 1% agarose gel, and compared with positive pHuN4-F112 plasmids, the comparison bands were of the same size (as shown in Figure 1 Shown) after sequencing, screening to obtain Nsp4 point mutation PRRSV positive clone plasmid.
1.5 Nsp4点突变PRRSV阳性克隆质粒的SwaI线性化1.5 SwaI linearization of Nsp4 point mutation PRRSV positive clone plasmid
用SwaI对Nsp4点突变质粒pV199D和亲本质粒pHuN4-F112进行线性化酶切,500μL反应体系为:20μLSwaI酶,50μL NEB Buffer 3.1,20μg-30μg质粒,其余补ddH2O至500μL。反应条件为25℃酶切12小时。参考说明书的方法,用QIAquick PCR Purification Kit纯化酶切产物,分别获得纯化的线性化产物。Use SwaI to linearize the Nsp4 point mutation plasmid pV199D and parental plasmid pHuN4-F112. The 500 μL reaction system is: 20 μL SwaI enzyme, 50 μL NEB Buffer 3.1, 20 μg-30 μg plasmid, and the rest supplemented with ddH2O to 500 μL. The reaction conditions were enzyme digestion at 25°C for 12 hours. Referring to the method in the manual, use the QIAquick PCR Purification Kit to purify the digested products to obtain purified linearized products respectively.
1.6体外转录1.6 In vitro transcription
参考说明书的方法,使用mMESSAGE mMACHINETM SP6试剂盒体外转录纯化后的线性化产物,体外转录的体系为20μL:2x NTP/CAP 10μL、10x Reaction Buffer 2μL、EnzymeMix 2μL、GTP 2μL、线性化模板4μL。反应条件为37℃,2小时。Referring to the method in the manual, use the mMESSAGE mMACHINETM SP6 kit to transcribe the purified linearized product in vitro. The in vitro transcription system is 20 μL: 2x NTP/
1.7 RNA的转染1.7 Transfection of RNA
体外转录后的产物需立即进行转染。接种MARC-145细胞于六孔板中培养,待细胞密度为80-90%时进行转染。转染的步骤是:每个EP管中加入1mL Opti-MEM,再加入5μL转染试剂DMRIE-C,留一管作为阴性对照,其它管加入相应体外转录的RNA 20μL,涡旋、振荡、顺离,弃掉六孔板内的培养基,用PBS洗一遍,每孔加入对应EP管内的全部液体,培养箱孵育8小时后弃液,换成2%FBS的培养基继续培养,并且逐日观察细胞病变。The product after in vitro transcription needs to be transfected immediately. Inoculate MARC-145 cells and culture them in a six-well plate, and perform transfection when the cell density reaches 80-90%. The transfection steps are: add 1mL Opti-MEM to each EP tube, then add 5μL transfection reagent DMRIE-C, keep one tube as a negative control, add 20μL of corresponding in vitro transcribed RNA to the other tube, vortex, shake, Discard the medium in the six-well plate, wash it once with PBS, add all the liquid in the corresponding EP tube to each well, discard the liquid after incubating in the incubator for 8 hours, replace it with 2% FBS medium to continue culturing, and observe daily Cytopathy.
待出现细胞病变后,收取细胞上清后传代,具体过程如下:MARC-145细胞在含有10%FBS的DMEM培养基的六孔板中贴壁长满单层后,弃培养基,PBS洗两遍,吸取转染过后五天的上清液,将其与维持液(含2%FBS的DMEM)按照1∶10的比例接种上清液200μL,置37℃继续培养并采用上述方法继续传代,并收取第三代的病毒上清保存。After cell lesions appeared, the cell supernatant was collected and passaged. The specific process was as follows: After the MARC-145 cells adhered to the wall in a six-well plate containing DMEM medium containing 10% FBS and grew into a monolayer, the medium was discarded, and washed twice with PBS. After five days of transfection, the supernatant was sucked out, inoculated with the maintenance solution (DMEM containing 2% FBS) in a ratio of 1:10 to inoculate 200 μL of the supernatant, placed at 37°C to continue culturing and using the above method to continue passage, And collect the virus supernatant of the third generation for preservation.
1.8荧光定量PCR和间接免疫荧光检测1.8 Fluorescent quantitative PCR and indirect immunofluorescence detection
将1.7中的第三代病毒上清用20μL/孔的感染剂量感染Marc-145细胞,在感染后24h、48h、72h、96h,提取细胞上清中的病毒RNA,反转录成cDNA,用荧光定量PCR进行检测,PCR反应体系为:Premix Ex TaqTM(Probe qPCR)10μL、PRRSV-N-F和PRRSV-N-F各0.4μL、探针0.6μL、ddH2O 6.6μL、cDNA 2μL。荧光定量PCR的结果如图2所示。用间接免疫荧光检测感染48h的MARC-145细胞,用冰甲醇固定10min,1%BSA室温封闭30min,用PRRSV核衣壳蛋白的特异性单抗(1∶800稀释)室温孵育2h,再加入FITC标记的羊抗兔的二抗室温孵育1h,PBS洗五遍后,在荧光显微镜下观察,结果如图3所示。根据上述结果,所获得的突变病毒pV199D具有感染性,能够从单一的基因组序列成功转变成具有活性的病毒粒子,并具有病毒感染性。The third-generation virus supernatant in 1.7 was used to infect Marc-145 cells with an infection dose of 20 μL/well, and at 24h, 48h, 72h, and 96h after infection, the viral RNA in the cell supernatant was extracted, reverse-transcribed into cDNA, and used Fluorescent quantitative PCR was used for detection. The PCR reaction system was: Premix Ex TaqTM (Probe qPCR) 10 μL, PRRSV-N-F and PRRSV-N-F 0.4 μL each, probe 0.6 μL, ddH2O 6.6 μL, cDNA 2 μL. The results of fluorescent quantitative PCR are shown in Figure 2. MARC-145 cells infected for 48 hours were detected by indirect immunofluorescence, fixed with ice methanol for 10 minutes, blocked with 1% BSA at room temperature for 30 minutes, incubated with monoclonal antibody specific to PRRSV nucleocapsid protein (1:800 dilution) at room temperature for 2 hours, and then added FITC The labeled goat anti-rabbit secondary antibody was incubated at room temperature for 1 hour, washed five times with PBS, and observed under a fluorescent microscope. The results are shown in Figure 3. According to the above results, the obtained mutant virus pV199D has infectivity, can successfully transform from a single genome sequence into an active virus particle, and has virus infectivity.
1.9病毒多步生长曲线的绘制1.9 Drawing of virus multi-step growth curve
将1.7中的第三代病毒上清和亲本毒株F112进行TCID50/mL测定,根据测定结果按1个MOI的感染剂量感染Marc-145细胞,在感染后12h、24h、36h、48h、60h、72h的时间点收取细胞上清。测定不同时间点病毒上清的TCID50/mL,最后以病毒感染时间为横坐标,以不同时间点的TCID50/mL的对数值为纵坐标,绘制病毒的多步生长曲线。结果如图,V199D突变毒与F112的生长曲线无明细差异,在接毒后72h拯救毒株病毒滴度基本达到最大值1.58×108TCID50/mL,亲本毒株F112达到了6.31×107TCID50/mL。The third-generation virus supernatant in 1.7 and the parental strain F112 were tested for TCID 50 /mL, and the Marc-145 cells were infected according to the infection dose of 1 MOI according to the measurement results. After infection, 12h, 24h, 36h, 48h,
以上所述的实施例仅是对本发明的技术方案进行描述,非对本发明保护范围的限制,在不脱离本发明设计精神的前提下,本领域普通技术人员对本发明的技术方案做出的各种变形和改进,均应落入本发明权利要求书确定的保护范围内。The above-mentioned embodiments are only to describe the technical solution of the present invention, not to limit the protection scope of the present invention. Variations and improvements should fall within the scope of protection defined by the claims of the present invention.
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