CN115557887A - Synthesis of trifluoromethyl pyridine derivative based on Ugi reaction and biological activity research of trifluoromethyl pyridine derivative - Google Patents

Synthesis of trifluoromethyl pyridine derivative based on Ugi reaction and biological activity research of trifluoromethyl pyridine derivative Download PDF

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CN115557887A
CN115557887A CN202211409135.4A CN202211409135A CN115557887A CN 115557887 A CN115557887 A CN 115557887A CN 202211409135 A CN202211409135 A CN 202211409135A CN 115557887 A CN115557887 A CN 115557887A
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pyridine derivative
trifluoromethyl pyridine
trifluoromethylpyridine
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张葵
刘杰
李艳
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Nanjing Forestry University
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D213/00Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members
    • C07D213/02Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
    • C07D213/04Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
    • C07D213/60Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D213/78Carbon atoms having three bonds to hetero atoms, with at the most one bond to halogen, e.g. ester or nitrile radicals
    • C07D213/81Amides; Imides
    • AHUMAN NECESSITIES
    • A01AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01PBIOCIDAL, PEST REPELLANT, PEST ATTRACTANT OR PLANT GROWTH REGULATORY ACTIVITY OF CHEMICAL COMPOUNDS OR PREPARATIONS
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    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D405/00Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom
    • C07D405/02Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings
    • C07D405/12Heterocyclic compounds containing both one or more hetero rings having oxygen atoms as the only ring hetero atoms, and one or more rings having nitrogen as the only ring hetero atom containing two hetero rings linked by a chain containing hetero atoms as chain links

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Abstract

The invention discloses a synthetic method and a biological activity test for synthesizing a trifluoromethyl pyridine derivative, belonging to the field of pharmaceutical chemistry. The method comprises the following steps: adding a raw material 3-chloro-5-trifluoromethylpyridine-2-formic acid into 8ml of methanol solvent, sequentially adding amine and aldehyde, finally adding an isonitrile compound, and stirring at the rotation speed of 400-1200rpm at room temperature until the reaction is terminated. Unreacted or incomplete reaction was heated to 55 ℃ and stirred overnight or heated to 75 ℃ reflux point and observed. After the reaction is finished, concentrating the reaction solution by using a rotary evaporator, and then carrying out silica gel column chromatography separation to obtain a target product. The synthetic method of the trifluoromethyl pyridine derivative provided by the invention has the characteristics of being scientific and reasonable, simple, good in atom economy, mild in condition, high in chemical selectivity and the like. The reaction equation is as followsThe following:
Figure DSA0000288627980000011

Description

Synthesis of trifluoromethyl pyridine derivative based on Ugi reaction and biological activity research of trifluoromethyl pyridine derivative
Technical Field
The invention relates to the field of pharmaceutical chemistry, in particular to a synthetic means and a biological activity test for synthesizing a trifluoromethyl pyridine derivative.
Background
Trifluoromethylpyridine is a biologically active fragment formed by connecting trifluoromethyl and a pyridine ring, and has unique properties including a hydrogen-like simulation effect, an electronic effect and a fat-soluble permeation effect. These properties can greatly affect the conformation, biomolecule affinity and drug metabolism of the compound, and make them have low toxicity, and have many resistance effects, such as herbicidal activity, insecticidal activity, antifungal activity and antiviral activity, so that various pesticide compounds containing TFMP fragments are found and marketed, and play an important role in crop protection research.
So far, trifluoromethyl pyridine intermediate is synthesized by methods such as exchanging with chloro and fluoro, constructing pyridine ring with trifluoromethyl building block, and substituting trifluoromethyl for bromoiodopyridine, so as to carry out the next synthesis. The synthesis method of the derivatives is complex, the change is single, and the conditions are harsh; and the reported oxidizing agent of the trifluoromethyl pyridine derivative has the problems of high toxicity, more waste and the like, so that the development of the synthesis method of the trifluoromethyl pyridine derivative has great significance.
Disclosure of Invention
The purpose of the invention is as follows: in order to overcome the above-mentioned deficiencies of the prior art, the present invention provides a method for synthesizing a trifluoromethylpyridine derivative based on Ugi reaction, as a supplement to the existing method for synthesizing a trifluoromethylpyridine derivative.
The technical scheme is as follows: in order to achieve the purpose, the invention adopts the technical scheme that:
a preparation method for synthesizing a trifluoromethylpyridine derivative based on Ugi reaction, wherein the trifluoromethylpyridine derivative has a structure shown as a formula I:
Figure BSA0000288628000000011
R 1 selected from phenyl, benzyl, p-tolyl, o-nitrophenyl, 4-chlorophenyl, 4-fluorophenyl, and the like; r 2 Selected from p-methoxyphenyl, phenyl, p-nitrophenyl, furyl, thienyl, p-methylphenyl, etc.; r 3 Selected from tert-butyl, phenyl, cyclohexyl; the method is characterized in that a raw material of 3-chloro-5-trifluoromethylpyridine-2-formic acid is added into 8ml of methanol solvent, amine and aldehyde are sequentially added, and an isonitrile compound is finally added, and the mixture is stirred at the rotating speed of 400-1200rpm at room temperature until the reaction is finishedAnd (4) stopping. Unreacted or incomplete reaction was heated to 55 ℃ and stirred overnight or to 75 ℃ and the reflux point was observed. After the reaction is finished, concentrating the reaction solution by using a rotary evaporator, and then carrying out silica gel column chromatography separation to obtain the target product. The chemical process is shown in a reaction formula II:
Figure BSA0000288628000000012
the mol ratio of the 3-chloro-5-trifluoromethyl pyridine-2-formic acid to the amine to the aldehyde to the isonitrile is 1.2: 1: 1.2. The solvent is methanol, the reaction temperature is room temperature or 55 ℃, and the reaction time is 24 hours.
The invention has the beneficial effects that: the synthetic method of the trifluoromethyl pyridine derivative provided by the invention is scientific and reasonable, provides a new way for synthesizing the trifluoromethyl pyridine derivative based on the Ugi reaction, obtains the trifluoromethyl pyridine derivative with various substituents, and is characterized by simple synthetic method, good atom economy, mild conditions and high chemical selectivity.
Drawings
FIG. 1 is a chemical reaction formula for preparing a trifluoromethylpyridine derivative;
FIG. 2 is an NMR spectrum of Compound 5a prepared in example 1;
FIG. 3 is an NMR spectrum of Compound 5b prepared in example 2;
FIG. 4 is an NMR spectrum of compound 5c prepared in example 3;
FIG. 5 is an NMR spectrum of compound 5d prepared in example 3;
FIG. 6 is an NMR spectrum of compound 5e prepared in example 3;
Detailed Description
The invention is described in further detail below with reference to the figures and specific examples.
The test methods described in the following examples are all conventional methods unless otherwise specified; the reagents and materials are commercially available, unless otherwise specified.
Example 1
To a 20mL reaction flask were added 3-chloro-5-trifluoromethylpyridine-2-carboxylic acid 1a (0.24mmol, 54.1mg), aniline 2a (0.24mmol, 22.4 mg), p-methoxybenzaldehyde 3a (0.2mmol, 27.2mg), tert-butylisonitrile 4a (0.24mmol, 20.0 mg) and methanol (8 mL), and the mixture was stirred at room temperature for 24 hours. After the reaction was completed, the solvent was removed using a rotary evaporator to obtain a crude product, which was separated by silica gel column chromatography (200-300 mesh silica gel) (petroleum ether/ethyl acetate = 3/1), and the solvent was removed using a rotary evaporator to obtain the objective product 5a with a yield of 76%.
Figure BSA0000288628000000021
Spectral analysis data 5a
1 H NMR(400MHz,CDCl 3 )δ8.53(s,1H),7.72(s,1H),7.21-7.07(m,4H),7.00(d,J=7.6Hz,3H),6.82-6.68(m,2H),6.14(s,1H),5.95(s,1H),3.75(s,3H),1.40(s,9H). 13 C NMR(101MHz,CDCl 3 )δ168.0,165.8,159.7,156.5,143.5(q,J CF =4.0Hz),137.8,134.2(q,J CF =3.6Hz),131.7,130.4,128.6,128.4,128.2,127.1(q,J CF =33.7Hz),125.7,122.1(q,J CF =271.5Hz),113.8,64.9,55.2,51.7,28.6. 19 F NMR(565MHz,CDCl 3 )δ-62.55.
Example 2
The same conditions as in example 1 were used except that 3b was used instead of 3a in example 1, and the results of the experiment are shown in Table 1.
Figure BSA0000288628000000022
Spectrogram analysis data 5b
1 H NMR(400MHz,CDCl 3 )δ8.54(s,1H),7.73(s,1H),7.31-7.27(m,2H),7.24(d,J=5.7Hz,3H),7.16(s,2H),7.00(d,J=7.7Hz,3H),6.16(s,1H),5.98(s,1H),1.42(s,9H). 13 C NMR(101MHz,CDCl 3 )167.7,165.8,156.5,143.5(q,J CF =4.0Hz),138.0,134.2(q,J CF =3.7Hz),133.8,130.3,128.6,128.6,128.5,128.4(2C),128.3,127.0(q,J CF =33.8Hz),122.1(q,J CF =273.4Hz),65.8,51.8,28.6. 19 F NMR(565MHz,CDCl 3 )δ-62.55.
Example 3
3a in example 1 was replaced with 3c, and the experimental results are shown in Table 1, except that the conditions were the same as in example 1.
Figure BSA0000288628000000031
Spectrogram analysis data 5c
1 H NMR(400MHz,CDCl 3 )δ8.51(s,1H),7.70(s,1H),7.29(s,1H),7.21-7.11(m,2H),7.05-6.95(m,3H),6.40-6.34(m,2H),6.31(s,1H),6.18(dd,J=3.3,1.7Hz,1H),1.39(s,9H). 13 C NMR(101MHz,CDCl 3 )δ165.7,165.5,156.1,146.9,143.6(q,J CF =3.9Hz),142.8,137.7,134.3(q,J CF =3.6Hz),129.5,128.6,128.6(2C),128.4,127.1(q,J CF =33.6Hz),122.1(q,J CF =271.6Hz),112.7,110.7,59.1,51.8,28.6. 19 F NMR(565MHz,CDCl 3 )δ-62.58.
Example 4
The experiment results are shown in Table 1, except that 4b is used instead of 4a in example 3 and the conditions are the same as in example 3.
Figure BSA0000288628000000032
Spectrogram analysis data 5d
1 H NMR(400MHz,CDCl 3 )δ8.54(s,1H),7.73(s,1H),7.33(s,1H),7.25-7.11(m,2H),7.05(s,3H),6.41(s,2H),6.29(d,J=8.2Hz,1H),6.22(d,J=3.1Hz,1H),3.89(dq,J=9.9,5.3,4.8Hz,1H),2.06-1.90(m,2H),1.78-1.65(m,2H),1.61(dt,J=13.4,3.9Hz,1H),1.38(qd,J=11.5,6.2Hz,2H),1.21(dq,J=25.5,13.1,11.5Hz,4H). 13 C NMR(101MHz,CDCl 3 )δ165.8,165.4,156.1,146.8,143.6(q,J CF =4.0Hz),143.0,137.7,134.3(q,J CF =3.6Hz),129.6,128.7,128.6,128.4,127.1(q,J CF =33.6Hz),122.1(q,J CF =271.5Hz),112.8,110.7,58.6,48.9,32.8,25.5,24.7(d,J=6.0Hz). 19 F NMR(565MHz,CDCl 3 )δ-62.55.
Example 5
3a in example 1 was replaced with 3d and 4a in example 1 was replaced with 4c, and the experimental results are shown in Table 1, except that the conditions were the same as in example 1.
Figure BSA0000288628000000041
Spectrogram analysis data 5e
1 H NMR(400MHz,CDCl 3 )δ8.56(s,1H),8.01(s,1H),7.76(s,1H),7.55(d,J=7.8Hz,2H),7.32(t,J=7.5Hz,2H),7.22(d,J=7.7Hz,3H),7.12(d,J=7.4Hz,1H),7.05(dd,J=13.0,8.3Hz,5H),6.48(s,1H),2.45(d,J=2.1Hz,1H),2.31(d,J=2.1Hz,3H). 13 C NMR(101MHz,CDCl 3 )δ167.1,166.2,156.3,143.5(q,J CF =3.8Hz),138.9,137.7(d,J=2.9Hz),134.3(q,J CF =3.9Hz),130.9,130.5,130.4,129.9,129.4,128.9,128.7,128.6,128.3,127.1(q,J CF =33.5Hz),124.4,122.1(q,J CF =271.3Hz),120.1,65.7,21.2. 19 F NMR(377MHz,CDCl 3 )δ-62.54.
Example 6
The compounds 5a-e prepared in examples 1-5 were subjected to a bioactivity test experiment, which was as follows:
the plant fungi used in the experiment are strains stored in a laboratory at 4 ℃, such as Botrytis cinerea, sclerotinia sclerotiorum, colletotrichum cucumis and Rhizoctonia solani. The adopted culture medium is a potato agar glucose culture medium (PDA for short). The PDA culture medium formula comprises: 200g of potato (peeled), 20g of glucose, 15g of agar and 1000mL of distilled water, and the preparation method comprises the following steps: cleaning and peeling potatoes, weighing 200g of potatoes, cutting the potatoes into small pieces, adding water, boiling the potatoes thoroughly (boiling for 20-30 minutes and being capable of being punctured by a glass rod), filtering the potatoes in a beaker by eight layers of gauze, adding 15-20g of agar according to experimental requirements, adding 20g of glucose, stirring the mixture evenly, slightly cooling the mixture after the mixture is fully dissolved, supplementing water to 1000mL, sterilizing the mixture for 15 minutes at 121 ℃ after split charging, and cooling the mixture for later use.
The experimental method comprises the following steps: a growth rate method is used.
(1) Firstly, 2 plant fungi are cultured on a PDA flat plate at 25 ℃ for about 3-6 days for later use;
(2) Heating PDA culture medium to melt, cooling to 45-50 deg.C, adding 250 μ L of 10g/L compound (1 a) to be tested to obtain culture medium containing 50mg/L medicinal liquid, and respectively cooling in culture dish, and using boscalid as positive control;
(3) Using a puncher to punch a round bacterial cake (the diameter is 0.50 cm) at the edge of each bacterial strain hypha cultured for 6d (the growth condition is as consistent as possible), then using an inoculating needle to pick the bacterial cake to the center of a drug-containing flat plate, and then placing the culture dish in an incubator (28 ℃) for culture;
(4) Observing and measuring the growth condition of hyphae at different time after treatment, measuring the diameter by adopting a cross method, processing data and calculating the inhibition rate;
(5) Inhibition (%) = (control hypha diameter-treated hypha diameter)/(control hypha diameter-0.5) × 100;
(6) Each treatment was repeated 3 times.
The test results are shown in Table 2.
TABLE 1
Figure BSA0000288628000000051
TABLE 2
Figure BSA0000288628000000061
The results of the bactericidal activity measurements of the experimental groups 5a-e and the control boscalid are shown in table 2. As can be seen from the results in Table 2, at a concentration of 50mg/L, the compounds 5a-e showed different degrees of bacteriostatic activity against 4 plant fungi, and some of the compounds had certain inhibitory activity against Sclerotinia sclerotiorum and Rhizoctonia solani; wherein the inhibition rate of the compound 5d on sclerotinia sclerotiorum is 90.7%, and the inhibition rate of part of compounds on rice sheath blight germ is more than 30%.

Claims (5)

1. A preparation method for synthesizing a trifluoromethylpyridine derivative based on Ugi reaction, wherein the trifluoromethylpyridine derivative has a structure shown as formula I:
Figure FSA0000288627990000011
R 1 selected from phenyl, benzyl, p-tolyl, o-nitrophenyl, 4-chlorophenyl, 4-fluorophenyl, and the like; r 2 Selected from p-methoxyphenyl, phenyl, p-nitrophenyl, furyl, thienyl, p-methylphenyl, etc.; r 3 Selected from tert-butyl, phenyl, cyclohexyl; the method is characterized in that a raw material 3-chloro-5-trifluoromethylpyridine-2-formic acid is added into 8ml of methanol solvent, amine and aldehyde are sequentially added, and an isonitrile compound is finally added and stirred at the rotating speed of 400-1200rpm at room temperature until the reaction is finished. Unreacted or incomplete reaction was heated to 55 ℃ and stirred overnight or heated to 75 ℃ reflux point and observed. After the reaction is finished, concentrating the reaction solution by using a rotary evaporator, and then carrying out silica gel column chromatography separation to obtain a target product. The chemical process is shown in a reaction formula II:
Figure FSA0000288627990000012
2. the preparation method of claim 1, wherein the molar ratio of the 3-chloro-5-trifluoromethylpyridine-2-carboxylic acid to the amine to the aldehyde to the isonitrile is 1.2: 1: 1.2.
3. The method of claim 1, wherein: the solvent is methanol, the reaction temperature is room temperature or 55 ℃, and the reaction time is 24 hours.
4. The fungi tested in the experiment were characterized by: including Botrytis cinerea, sclerotinia sclerotiorum, colletotrichum cucumerinum and Rhizoctonia solani.
5. The use of a compound according to claim 1 for the preparation of a medicament against the fungi Botrytis fragilis, sclerotinia sclerotiorum, colletotrichum cucumeri and Rhizoctonia solani.
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Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB1448810A (en) * 1974-04-02 1976-09-08 Ciba Geigy Ag Fungicidal n-substituted furoic amide derivatives
CN110372622A (en) * 2018-04-13 2019-10-25 南京农业大学 Phenyl acetanides containing chiral oxazoline and the purposes as disinfectant use in agriculture

Patent Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
GB1448810A (en) * 1974-04-02 1976-09-08 Ciba Geigy Ag Fungicidal n-substituted furoic amide derivatives
CN110372622A (en) * 2018-04-13 2019-10-25 南京农业大学 Phenyl acetanides containing chiral oxazoline and the purposes as disinfectant use in agriculture

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
ANDRÉS BORJA-MIRANDA等: "Synthesis of Polysubstituted Isoindolinones via Radical Cyclization of 1, 3-Dicarbonyl Ugi-4CR Adducts Using Tetrabutylammonium Persulfate and TEMPO", 《J. ORG. CHEM.》, vol. 86, pages 929 *
JI-YING QIU等: "A Facile Synthesis of Indole Derivatives by a Palladium- Catalyzed Process Initiated from Ugi Adducts and their Antifungal Activities", 《CHEMISTRYSELECT》, vol. 6, pages 12921 *

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