CN115125270A - Alpha-globin overexpression vector and application thereof - Google Patents

Alpha-globin overexpression vector and application thereof Download PDF

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CN115125270A
CN115125270A CN202110304017.6A CN202110304017A CN115125270A CN 115125270 A CN115125270 A CN 115125270A CN 202110304017 A CN202110304017 A CN 202110304017A CN 115125270 A CN115125270 A CN 115125270A
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globin
alpha
gene
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seq
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吴宇轩
程艳
徐赛娟
赵飞燕
席在喜
刘明耀
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East China Normal University
Bioray Laboratories Inc
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Bioray Laboratories Inc
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Abstract

The invention discloses an alpha-globin overexpression vector and application thereof, wherein the alpha-globin overexpression vector sequentially comprises: (1) a locus control region, an alpha-globin promoter, an HBA2 gene and an HBA2 gene 3' sequence fragment, wherein the locus control region is HS 40; or (2) locus control regions HS4, HS3 and HS2, the beta-globin promoter, the HBA2 gene and the 3' sequence fragment of the HBB gene. The overexpression vector provided by the invention can efficiently transduce the target gene, can stably express the target gene for a long time, and has high infection efficiency and expression stability.

Description

Alpha-globin overexpression vector and application thereof
Technical Field
The invention belongs to the field of biomedicine, and particularly relates to an alpha-globin overexpression vector and application thereof.
Background
Normal hemoglobin is a tetramer consisting of two alpha-globin chains and two beta-globin chains. There are two functional alpha-hemoglobin genes, named HBA1 and HBA2, respectively. Alpha thalassemia (alpha thalassemia) is an autosomal recessive genetic disorder caused by an imbalance in alpha chain and non-alpha chain synthesis due to a loss or dysfunction of the alpha globin gene resulting in reduced or no alpha-globin chain synthesis. The common deletion on the alpha-globin gene cluster is beta 0/- - SEA And-alpha 4.2 /-α 4.2 And the like, the mechanism of occurrence is deletion due to homologous and non-homologous recombination of one or two chromosomes of the alpha globin gene, and the gene deletion can lead the expression level of the alpha globin gene to be down-regulated so as to reduce the production of the alpha globin chain.
Alpha thalassemia is reported to be one of the most common monogenic genetic diseases in the world, particularly common in the mediterranean, southeast asia, africa, middle east and indian subcontinent, with a high incidence in the south area of the Yangtze river in China. According to the World Health Organization (WHO) estimates, 20% of the world population may have one or more alpha-globin genes deleted. In southern provinces and southeast Asia of China, the most common deletion types are-SEA (southeast Asia deletion type), -alpha 4.2 (left deletion) and-alpha 3.7 Three types (right deletion). In the past decades, north has changed due to changes in population architectureThe incidence of alpha thalassemia in europe and north america is increasing. Currently, effective treatment means for thalassemia at home and abroad include allogeneic hematopoietic cell transplantation, normative long-term blood transfusion, and deferral therapy, but have rejection risks, complications, and other toxic effects, and thus a gene therapy regimen is being evaluated as a new one.
In recent years, due to the rapid advance of genetic engineering technology, CRISPR/Cas technology has become one of the hot spots of the scientific community. Research shows that compared with other gene editing tools, the CRISPR/Cas system has higher cutting efficiency in stem cells, can be used for constructing disease models, screening medicines, preparing therapeutic stem cells and the like, brings new hopes for disease treatment, but possible off-target risks cannot be ignored. Viral vectors have the characteristics of high infection rate and low cytotoxicity, and are still the preferred scheme for many scientific researches and clinical trials at present. Lentiviral vectors derived from HIV-1 lentivirus, comprising a plurality of accessory elements for increasing transduction efficiency, viral packaging and/or elements for increasing expression of therapeutic genes, and modified 5'LTR and/or 3' LTR, are incapable of transcribing RNA even in the presence of all viral proteins upon integration of such vectors into a cell of interest, rendering the virus replication-deficient to increase the safety of the lentivirus system. The lentivirus vector has the characteristics of capability of infecting cells in a non-dividing period, large capacity of accommodating exogenous target gene fragments, strong stability, high infection efficiency and the like.
The third generation lentivirus system, constructs gag, pol genes and rev or env genes on different plasmids, respectively, and introduces deletions in the 3' LTR of the viral genome to generate self-inactivating (SIN) lentivirus vectors, destroys the promoter/enhancer activity of LTRs, further improves safety, and reduces the risk of carcinogenesis. 2/3 clinical trials of gene therapy are using viral vectors to introduce genes into target cells and HIV-derived lentiviral vectors are currently used in large numbers. Gene therapy by lentiviral vectors has brought a new choice for hemoglobinopathies, and clinical studies have been carried out with encouraging results, but long-term efficacy and safety remain to be demonstrated. In vitro gene therapy, the addition of a normal globin gene together with appropriate cis-linked regulatory elements to Hematopoietic Stem Cells (HSCs) by vector transfer and chromosomally integrated gene delivery remains the method of choice. Lentiviral vector gene therapy requires very high hematopoietic stem cell infection efficiency and long-term stable α -globin expression for clinical significance.
However, the studies on globin overexpression vectors in the prior art are almost directed to beta-globin gene, so that an alpha-globin overexpression vector with an expression rate suitable for clinical application is urgently needed.
Disclosure of Invention
The invention aims to solve the technical problem of providing an alpha-globin overexpression vector with moderate expression rate and application thereof in order to overcome the defect that the prior art is lack of an overexpression vector for expressing an alpha-globin gene.
In humans, the regulatory sequences of the alpha-globin gene contain binding sites for various cis-and trans-acting factors, and the synergistic effect between them ensures the tissue and temporal specificity of the alpha globin gene expression. For the expression regulation of heterologous alpha-globin genes, a large amount of sequences of various functional regions need to be synthesized in the process of completely copying nature, the process is very complex and is difficult to realize in terms of cost; however, the expression of the heterologous HBB gene, which has been studied and developed to some extent, is based on the expression control of the regulatory element of the native HBB gene, and the selection of the expression control element of the heterologous α -globin gene has not been studied in the prior art, so that the expression of the heterologous α -globin gene is still a technical problem at present.
In order to solve the above technical problems, one of the technical solutions provided by the present invention is: an alpha-globin overexpression vector comprising, in order: (1) a locus control region, an alpha-globin promoter, an HBA2 gene and an HBA2 gene 3' sequence fragment, wherein the locus control region is HS 40;
or (2) locus control regions HS4, HS3 and HS2, the beta-globin promoter, the HBA2 gene and the 3' sequence fragment of the HBB gene.
The sequential inclusion refers to sequential inclusion from the 5 'end to the 3' end.
Preferably, the alpha-globin overexpression vector comprises a cis-acting element, an HBA2 gene and a 3' sequence fragment of HBA2 gene in sequence, wherein the cis-acting element is composed of a locus control region HS40 and an alpha-globin promoter.
The alpha-globin promoter of the invention is preferably the HBA2 promoter; more preferably, the sequence comprises the sequence shown in SEQ ID NO. 2, or the sequence with more than 80% of sequence identity with the sequence shown in SEQ ID NO. 2, for example, the sequence is shown in SEQ ID NO. 2.
The locus control region HS40 according to the present invention can be conventional in the art, and its sequence preferably comprises the sequence shown as SEQ ID NO. 1, or comprises a sequence having more than 80% sequence identity with the sequence shown as SEQ ID NO. 1, for example, its sequence is shown as SEQ ID NO. 1.
The 3' sequence fragment of the HBA2 gene of the invention can be conventional in the art, and the sequence preferably comprises a sequence shown as SEQ ID NO. 4, or a sequence with more than 80% sequence identity with the sequence shown as SEQ ID NO. 4, for example, the sequence shown as SEQ ID NO. 4.
The beta-globin promoter of the present invention is preferably the HBB promoter; more preferably, the sequence comprises the sequence shown as SEQ ID NO. 8, or the sequence has more than 80% of sequence identity with the sequence shown as SEQ ID NO. 8, for example, the sequence is shown as SEQ ID NO. 8.
The locus control region HS4 according to the present invention may be conventional in the art, and its sequence preferably comprises the sequence shown as SEQ ID NO. 5, or a sequence having more than 80% sequence identity with the sequence shown as SEQ ID NO. 5, for example, its sequence is shown as SEQ ID NO. 5.
The locus control region HS3 according to the present invention can be conventional in the art, and its sequence preferably comprises the sequence shown in SEQ ID NO. 6, or a sequence having more than 80% sequence identity with the sequence shown in SEQ ID NO. 6, for example, its sequence is shown in SEQ ID NO. 6.
The locus control region HS2 according to the present invention can be conventional in the art, and its sequence preferably comprises the sequence shown as SEQ ID NO. 7, or comprises a sequence having more than 80% sequence identity with the sequence shown as SEQ ID NO. 7, for example, its sequence is shown as SEQ ID NO. 7.
The HBB gene 3' sequence fragment of the invention may be conventional in the art, and its sequence preferably comprises the sequence shown as SEQ ID NO. 9, or a sequence having more than 80% sequence identity with the sequence shown as SEQ ID NO. 9, for example, the sequence shown as SEQ ID NO. 9.
The sequence of the HBA2 gene of the present invention may be conventional in the art; the sequence preferably comprises a sequence shown as SEQ ID NO. 3, or a sequence having more than 80% sequence identity with a sequence shown as SEQ ID NO. 3, for example, the sequence is shown as SEQ ID NO. 3.
The plasmid vector of the alpha-globin overexpression vector is preferably a Lenti vector, and the sequence of the Lenti vector preferably comprises a sequence shown as SEQ ID NO. 10 or a sequence with more than 80% of sequence identity with the sequence shown as SEQ ID NO. 10, for example, the sequence is shown as SEQ ID NO. 10.
The above-described sequence identity of 80% or more comprises 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% or more sequence identity.
The second technical scheme provided by the invention is as follows: a transformant comprising the above-described alpha-globin overexpression vector.
The host cell of the transformant is preferably a erythroid cell.
The erythroid cells are preferably HUDEP2 or CD34 + Hematopoietic stem cells.
The third technical scheme provided by the invention is as follows: a lentiviral vector system comprising the overexpression vector described above.
The lentiviral vector system preferably further comprises psPAX2 and the pCAG-VSVG plasmid.
The fourth technical scheme provided by the invention is as follows: an application of the overexpression vector in preparing a preparation for treating thalassemia.
The thalassemia is preferably alpha-thalassemia.
The fifth technical scheme provided by the invention is as follows: the use of HS40, alpha-globin promoter, HBA2 gene 3 'sequence fragment, HS4, HS3, HS2, beta-globin promoter or HBB gene 3' sequence fragment as defined in the above technical scheme for the construction of an HBA2 overexpression vector.
The vector is preferably a lentiviral vector.
On the basis of the common knowledge in the field, the above preferred conditions can be combined randomly to obtain the preferred embodiments of the invention.
The reagents and starting materials used in the present invention are commercially available.
The positive progress effects of the invention are as follows:
the alpha-globin overexpression vector constructed by the invention can efficiently transduce the target gene, can stably express the target gene for a long time, and has high infection efficiency and expression stability; the invention can remarkably improve the expression of the alpha-globin gene in a deletion type alpha-thalassemia patient by using the gene therapy mediated by the lentiviral vector, so that the expression quantity of the alpha-globin gene reaches a moderate state, is not too high or too low, provides hope for successfully treating all alpha thalassemia patients, and has important clinical significance. After erythroid cell lines infected by the slow virus of the vector and hematopoietic stem cells induce erythroid differentiation, alpha globin can be over-expressed, so the vector combined with hematopoietic stem cell transplantation is expected to treat various mutation types of alpha thalassemia patients.
Drawings
FIG. 1 is a schematic representation of Lenti-A1(a) and Lenti-A2(b) lentiviral vectors.
FIG. 2 shows that the expression level of alpha-globin is increased after infection of HUDEP2 cells with lentiviral erythroid differentiation by RT-qPCR.
FIG. 3 shows the display of CD34 by RT-qPCR + After the cells are infected with lentivirus erythroid differentiation, the expression level of alpha-globin is increased.
FIG. 4 shows CD34 depleted of alpha by RT-qPCR showing infection by two lentiviruses Lenti-A1 and Lenti-A2 + The expression level of alpha-globin in the red blood cells after differentiation can be obviously improved after the hematopoietic stem cells are differentiatedComparison with group, P<0.05; increased α -globin expression following Lenti-A1 and Lenti-A2 lentivirus infection of cells).
FIG. 5 shows CD34 in alpha-poor patients as shown by RT-qPCR + Increased alpha-globin expression following lentivirus infection of hematopoietic stem cells (, P, compared to control group<0.05; the expression level of alpha-globin is higher after Lenti-A1 and Lenti-A2 lentivirus infect cells respectively).
Detailed Description
The invention is further illustrated by the following examples, which are not intended to limit the scope of the invention. Experimental methods without specific conditions noted in the following examples, selected according to conventional methods and conditions, or according to commercial instructions; the material reagents, the sources of which are not specified, can be purchased conventionally as commercially available products.
Example 1 construction of an alpha-globin overexpression vector
Lenti-A1 (figure 1-a) is an overexpression vector carrying human alpha-globin gene, mainly comprising DNase I hypersensitive site HS40, human HBA2 gene promoter and gene sequence, about 8kb long, mainly selecting its own promoter and regulatory element, and can specifically express alpha-globin in erythroid cells.
Lenti-A2 (figure 1-b) is another overexpression vector carrying human alpha-globin gene constructed by the invention, mainly comprises human HBA2 gene, human beta-globin gene promoter and mini-LCR consisting of HS2, HS3 and HS4, and has the length of about 10 kb. The expression level of alpha globin in red blood cells is equivalent to that of endogenous alpha globin by connecting LCR consisting of HS 2-HS 4 core sequence with hemoglobin A2(HBA2) globin gene with beta globin promoter. The HBA2 gene itself is not expressed at high levels in cultured erythrocytes, but shows erythrocyte-specific high-level expression when linked to β -LCR.
Wherein the sequences of the elements are respectively shown as SEQ ID NO 1-10.
+ Example 2 construction of a Lentiviral vector System and its use in HUDEP2 and CD34 application of hematopoietic stem cells
The packaging method of the lentivirus vector system comprises the following steps: HEK 293T cells were routinely cultured in DMEM high glucose medium containing 10% FBS. 1 day before transfection, cells with good log phase state are taken, 15ml-20ml cell suspension is inoculated in a 15cm dish, and each 15cm dish is 2.1 multiplied by 10 7 A cell. And carrying out transfection experiments when the cell density is 80-90%. The 293T cells were co-transfected with psPAX2, pCAG-VSVG and HBA overexpression vector three plasmids, 20. mu.g of the desired gene plasmid, psPAX 213.3. mu.g, pCAG-VSVG 6.7. mu.g, following the instructions of the PEI transfection reagent.
Complete medium (DMEM with 10% FBS) was replaced after 6 h. Collecting virus liquid after 48h, ultracentrifuging for 2h at the rotating speed of 24000r/min, discarding supernatant after centrifugation, concentrating, then resuspending virus by using 1mL of X-VIVO to obtain virus concentrated solution, and storing at-80 ℃ for later use.
We have conducted experiments to introduce functional α -globin gene into HUDEP-2(Human Umbilical Cord Blood depleted Erythoid Progenitor-2) and CD34 by constructing lentiviral vectors + In hematopoietic stem cells, driven by cis regulatory elements, high red blood cell-specific expression is produced, thereby producing sufficient hemoglobin, reducing or eliminating the need for transfusion therapy. RT-PCR analysis showed that two lentiviral vectors could be found in HUDEP2 cells (Kurita R, Suda N, Sudo K, Miharada K, Hiroyama T, et al (2013) assessment of immobilized Human Erythroid Progeneator Cell Lines Able to product acquired Red Blood cells PLoS ONE 8(3) e59890.doi:10.1371/journal. point. 0059890) and CD34 + The expression level of alpha-globin was elevated 18 days after erythroid differentiation in cells (from normal human bone marrow) (FIGS. 2 and 3).
+ Example 3 construction of a model of deleted α -thalassemia-depleted CD34 cells and α -globin lentivirus vectors in the model Applications of
Normal humans have 4 alphaglobin genes (α α/α α, 2 α 2 and 2 α 1); deletion mutant α anemias are classified into the following types: deletion of 1 alpha globin gene (-alpha/alpha) is of stationary type; deletion of 2 alpha globin genes (-one)A/α α or- α/- α) is of standard type; deletion of 3 α globin genes (-/-) - α is called hemoglobinopathy H (HbH); the result that 4 alpha globin genes are all deleted (- -/- -) is the Hb Bart's fetal edema syndrome. The deletion of the alphaglobin gene is mainly caused by the deletion of large fragments of DNA, and the deletion ranges from 2.7kb to the whole gene cluster. Experiment by constructing-alpha 4.2 The alpha-thalassemia deficiency disease model designs sgRNA aiming at an HBA2 gene exon region, and achieves the purpose of deleting DNA fragments by inducing double strand breaks at two ends of the region simultaneously. The RNP formed by the sgRNA and the Cas9 protein is transferred into human CD34+ hematopoietic stem cells through electrotransformation, homozygous cell strains and heterozygous cell strains are constructed, and the expression levels of alpha-globin and beta-globin and the ratio of the alpha-globin and the beta-globin are further tested. The expression level of alpha-globin is detected by RT-qPCR 18 days after in vitro erythroid differentiation, and the result shows that the expression level of alpha-globin is obviously reduced, thereby proving that the construction of a disease model is successful (figure 4). After the disease model is successfully constructed, Lenti-A1 and Lenti-A2 lentivirus vectors are infected, and the expression level of alpha-globin is detected 18 days after in vitro erythroid differentiation. The results show that both lentiviral vectors can significantly increase the expression level of alpha-globin (fig. 4), which indicates that both vectors are expected to be gene therapy vectors for alpha-poor diseases.
SgRNA sequence: GATGGAGAGCGTATGTTAAC are provided. (SEQ ID NO:11)
+ Example 4 use of alpha-globin overexpression Lentiviral vectors in HbH patients with poor disease CD34
The HbH disease (transfusion-dependent alpha-thalassemia, genotype- SEA /αα CS ) CD34 of thalassemia patients + Hematopoietic stem cells were verified. The HbH patient has CD34 + Hematopoietic stem cells were obtained by the following method: collecting peripheral blood 10ml of HbH patients with disease and poor place, separating mononuclear cells with Ficoll, and collecting CD34 with CD34 magnetic beads + Cells, resuspended in culture medium. The results show (fig. 5) that the α -globin level expressed in cells infected with virus is significantly higher than that of uninfected virus. From the research results that have been obtained above, we show that we areThe constructed alpha-globin over-expression vector is packaged into slow virus and then infects erythroid cell line or CD34 + After hematopoietic stem cells, alpha-globin can be efficiently expressed in erythroid cells induced to differentiate.
Sequence listing
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Shanghai Bangyao Biological Technology Co.,Ltd.
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<400> 1
cgaccctctg gaacctatca gggaccacag tcagccaggc aagcacatct gcccaagcca 60
agggtggagg catgcagctg tgggggtctg tgaaaacact tgagggagca gataactggg 120
ccaaccatga ctcagtgctt ctggaggcca acaggactgc tgagtcatcc tgtgggggtg 180
gaggtgggac aagggaaagg ggtgaatggt actgctgatt acaacctctg gtgctgcctc 240
cccctcctgt ttatctgaga gggaaggcca tgcccaaagt gttcacagcc aggcttcagg 300
ggcaaagcct gacccagaca gtaaatacgt tcttcatctg gagctgaaga 350
<210> 2
<211> 626
<212> DNA
<213> Artificial Sequence
<220>
<223> alpha-globin promoter
<400> 2
ggtgcctgtc actcaagcac actagtgact atcgccagag ggaaagggag ctgcaggaag 60
cgaggctgga gagcaggagg ggctctgcgc agaaattctt ttgagttcct atgggccagg 120
gcgtccgggt gcgcgcattc ctctccgccc caggattggg cgaagccctc cggctcgcac 180
tcgctcgccc gtgtgttccc cgatcccgct ggagtcgatg cgcgtccagc gcgtgccagg 240
ccggggcggg ggtgcgggct gactttctcc ctcgctaggg acgctccggc gcccgaaagg 300
aaagggtggc gctgcgctcc ggggtgcacg agccgacagc gcccgacccc aacgggccgg 360
ccccgccagc gccgctaccg ccctgccccc gggcgagcgg gatgggcggg agtggagtgg 420
cgggtggagg gtggagacgt cctggccccc gccccgcgtg cacccccagg ggaggccgag 480
cccgccgccc ggccccgcgc aggccccgcc cgggactccc ctgcggtcca ggccgcgccc 540
cgggctccgc gccagccaat gagcgccgcc cggccgggcg tgcccccgcg ccccaagcat 600
aaaccctggc gcgctcgcgg gccggc 626
<210> 3
<211> 835
<212> DNA
<213> Artificial Sequence
<220>
<223> HBA2
<400> 3
actcttctgg tccccacaga ctcagagaga acccaccatg gtgctgtctc ctgccgacaa 60
gaccaacgtc aaggccgcct ggggtaaggt cggcgcgcac gctggcgagt atggtgcgga 120
ggccctggag aggtgaggct ccctcccctg ctccgacccg ggctcctcgc ccgcccggac 180
ccacaggcca ccctcaaccg tcctggcccc ggacccaaac cccacccctc actctgcttc 240
tccccgcagg atgttcctgt ccttccccac caccaagacc tacttcccgc acttcgacct 300
gagccacggc tctgcccagg ttaagggcca cggcaagaag gtggccgacg cgctgaccaa 360
cgccgtggcg cacgtggacg acatgcccaa cgcgctgtcc gccctgagcg acctgcacgc 420
gcacaagctt cgggtggacc cggtcaactt caaggtgagc ggcgggccgg gagcgatctg 480
ggtcgagggg cgagatggcg ccttcctctc agggcagagg atcacgcggg ttgcgggagg 540
tgtagcgcag gcggcggctg cgggcctggg ccgcactgac cctcttctct gcacagctcc 600
taagccactg cctgctggtg accctggccg cccacctccc cgccgagttc acccctgcgg 660
tgcacgcctc cctggacaag ttcctggctt ctgtgagcac cgtgctgacc tccaaatacc 720
gttaagctgg agcctcggta gccgttcctc ctgcccgctg ggcctcccaa cgggccctcc 780
tcccctcctt gcaccggccc ttcctggtct ttgaataaag tctgagtggg cagca 835
<210> 4
<211> 477
<212> DNA
<213> Artificial Sequence
<220>
<223> 3' sequence of HBA2 Gene
<400> 4
gcctgtgtgt gcctgggttc tctctatccc ggaatgtgcc aacaatggag gtgtttacct 60
gtctcagacc aaggacctct ctgcagctgc atggggctgg ggagggagaa ctgcagggag 120
tatgggaggg gaagctgagg tgggcctgct caagagaagg tgctgaacca tcccctgtcc 180
tgagaggtgc caggcctgca ggcagtggct cagaagctgg ggaggagaga ggcatccagg 240
gttctactca gggagtccca gcatcgccac cctcctttga aatctccctg gttgaaccca 300
gttaacatac gctctccatc aaaacaaaac gaaacaaaac aaactagcaa aataggctgt 360
ccccagtgca agtgcaggtg ccagaacatt tctctcattc ccaccccttc ctgccagagg 420
gtaggtggct ggagtgaggg tgctggccct actcacactt cctgtgtcac ggtgacc 477
<210> 5
<211> 1157
<212> DNA
<213> Artificial Sequence
<220>
<223> HS4
<400> 5
actagtgcat gcaaatctga cactcagtgg gcctgggtga aggtgagaat tttattgctg 60
aatgagagcc tctggggaca tcttgccagt caatgagtct caggttcaat ttccttctca 120
gtcttggagt aacagaagct catgcattta ataaacggaa attttgtatt gaaatgagag 180
ccattggaaa tcatttactc cagactccta cttataaaaa gagaaactga ggctcagaga 240
agggtgggga ctttctcagt atgacatgga aatgatcagg cttggattca aagctcctga 300
ctttctgtct agtgtatgtg cagtgagccc cttttcctct aactgaaaga aggaaaaaaa 360
aatggaaccc aaaatattct acatagtttc catgtcacag ccagggctgg gcagtctcct 420
gttatttctt ttaaaataaa tatatcattt aaatgcataa ataagcaaac cctgctcggg 480
aatgggaggg agagtctctg gagtccaccc cttctcggcc ctggctctgc agatagtgct 540
atcaaagccc tgacagagcc ctgcccattg ctgggccttg gagtgagtca gcctagtaga 600
gaggcagggc aagccatctc atagctgctg agtgggagag agaaaagggc tcattgtcta 660
taaactcagg tcatggctat tcttattctc acactaagaa aaagaatgag atgtctacat 720
ataccctgcg tcccctcttg tgtactgggg tccccaagag ctctctaaaa gtgatggcaa 780
agtcattgcg ctagatgcca tcccatctat tataaacctg catttgtctc cacacaccag 840
tcatggacaa taaccctcct cccaggtcca cgtgcttgtc tttgtataat actcaagtaa 900
tttcggaaaa tgtattcttt caatcttgtt ctgttattcc tgtttcaatg gcttagtaga 960
aaaagtacat acttgttttc ccataaattg acaatagaca atttcacatc aatgtctata 1020
tgggtcgttg tgtttgctgt gtttgcaaaa actcacaata actttatatt gttactactc 1080
taagaaagtt acaacatggt gaatacaaga gaaagctatt acaagtccag aaaataaaag 1140
ttatcatctt gaggcct 1157
<210> 6
<211> 846
<212> DNA
<213> Artificial Sequence
<220>
<223> HS3
<400> 6
ctggttagaa ggttctactg gaggagggtc ccagcccatt gctaaattaa catcaggctc 60
tgagactggc agtatatctc taacagtggt tgatgctatc ttctggaact tgcctgctac 120
attgagacca ctgacccata cataggaagc ccatagctct gtcctgaact gttaggccac 180
tggtccagag agtgtgcatc tcctttgatc ctcataataa ccctatgaga tagacacaat 240
tattactctt actttataga tgatgatcct gaaaacatag gagtcaaggc acttgcccct 300
agctgggggt ataggggagc agtcccatgt agtagtagaa tgaaaaatgc tgctatgctg 360
tgcctccccc acctttccca tgtctgccct ctactcatgg tctatctctc ctggctcctg 420
ggagtcatgg actccaccca gcaccaccaa cctgacctaa ccacctatct gagcctgcca 480
gcctataacc catctgggcc ctgatagctg gtggccagcc ctgaccccac cccaccctcc 540
ctggaacctc tgatagacac atctggcaca ccagctcgca aagtcaccgt gagggtcttg 600
tgtttgctga gtcaaaattc cttgaaatcc aagtccttag agactcctgc tcccaaattt 660
acagtcatag acttcttcat ggctgtctcc tttatccaca gaatgattcc tttgcttcat 720
tgccccatcc atctgatcct cctcatcagt gcagcacagg gcccatgagc agtagctgca 780
gagtctcaca taggtctggc actgcctctg acatgtccga ccttaggcaa atgcttgact 840
cttctg 846
<210> 7
<211> 693
<212> DNA
<213> Artificial Sequence
<220>
<223> HS2
<400> 7
aggccttttg ccacctagct gtccaggggt gccttaaaat ggcaaacaag gtttgttttc 60
ttttcctgtt ttcatgcctt cctcttccat atccttgttt catattaata catgtgtata 120
gatcctaaaa atctatacac atgtattaat aaagcctgat tctgccgctt ctaggtatag 180
aggccacctg caagataaat atttgattca caataactaa tcattctatg gcaattgata 240
acaacaaata tatatatata tatatatata cgtatatgtg tatatatata tatatattca 300
ggaaataata tattctagaa tatgtcacat tctgtctcag gcatccattt tctttatgat 360
gccgtttgag gtggagtttt agtcaggtgg tcagcttctc cttttttttg ccatctgccc 420
tgtaagcatc ctgctgggga cccagatagg agtcatcact ctaggctgag aacatctggg 480
cacacaccct aagcctcagc atgactcatc atgactcagc attgctgtgc ttgagccaga 540
aggtttgctt agaaggttac acagaaccag aaggcggggg tggggcactg accccgacag 600
gggcctggcc agaactgctc atgcttggac tatgggaggt cactaatgga gacacacaga 660
aatgtaacag gaactaagga aaaactgaag ctt 693
<210> 8
<211> 265
<212> DNA
<213> Artificial Sequence
<220>
<223> beta-globin promoter
<400> 8
gtaaatacac ttgcaaagga ggatgttttt agtagcaatt tgtactgatg gtatggggcc 60
aagagatata tcttagaggg agggctgagg gtttgaagtc caactcctaa gccagtgcca 120
gaagagccaa ggacaggtac ggctgtcatc acttagacct caccctgtgg agccacaccc 180
tagggttggc caatctactc ccaggagcag ggagggcagg agccagggct gggcataaaa 240
gtcagggcag agccatctat tgctt 265
<210> 9
<211> 1090
<212> DNA
<213> Artificial Sequence
<220>
<223> 3' sequence of HBB Gene
<400> 9
tgatgtattt aaattatttc tgaatatttt actaaaaagg gaatgtggga ggtcagtgca 60
tttaaaacat aaagaaatga agagctagtt caaaccttgg gaaaatacac tatatcttaa 120
actccatgaa agaaggtgag gctgcaaaca gctaatgcac attggcaaca gcccctgatg 180
catatgcctt attcatccct cagaaaagga ttcaagtaga ggcttgattt ggaggttaaa 240
gttttgctat gctgtatttt acattactta ttgttttagc tgtcctcatg aatgtctttt 300
cactacccat ttgcttatcc tgcatctctc agccttgact ccactcagtt ctcttgctta 360
gagataccac ctttcccctg aagtgttcct tccatgtttt acggcgagat ggtttctcct 420
cgcctggcca ctcagcctta gttgtctctg ttgtcttata gaggtctact tgaagaagga 480
aaaacagggg tcatggtttg actgtcctgt gagcccttct tccctgcctc ccccactcac 540
agtgacccgg aatctgcagt gctagtctcc cggaactatc actctttcac agtctgcttt 600
ggaaggactg ggcttagtat gaaaagttag gactgagaag aatttgaaag gcggcttttt 660
gtagcttgat attcactact gtcttattac cctgtcatag gcccacccca aatggaagtc 720
ccattcttcc tcaggatgtt taagattagc attcaggaag agatcagagg tctgctggct 780
cccttatcat gtcccttatg gtgcttctgg ctctgcagtt attagcatag tgttaccatc 840
aaccacctta acttcatttt tcttattcaa tacctaggta ggtagatgct agattctgga 900
aataaaatat gagtctcaag tggtccttgt cctctctccc agtcaaattc tgaatctagt 960
tggcaagatt ctgaaatcaa ggcatataat cagtaataag tgatgataga agggtatata 1020
gaagaatttt attatatgag agggtgaaac cctcaaaatg aaatgaaatc agacccttgt 1080
cttacaccat 1090
<210> 10
<211> 5910
<212> DNA
<213> Artificial Sequence
<220>
<223> Lenti vector
<400> 10
ctggaattcg agctcggtac ctttaagacc aatgacttac aaggcagctg tagatcttag 60
ccacttttta aaagaaaagg ggggactgga agggctaatt cactcccaac gaagacaaga 120
tctgcttttt gcttgtactg ggtctctctg gttagaccag atctgagcct gggagctctc 180
tggctaacta gggaacccac tgcttaagcc tcaataaagc ttgccttgag tgcttcaagt 240
agtgtgtgcc cgtctgttgt gtgactctgg taactagaga tccctcagac ccttttagtc 300
agtgtggaaa atctctagca gtagtagttc atgtcatctt attattcagt atttataact 360
tgcaaagaaa tgaatatcag agagtgagag gaacttgttt attgcagctt ataatggtta 420
caaataaagc aatagcatca caaatttcac aaataaagca tttttttcac tgcattctag 480
ttgtggtttg tccaaactca tcaatgtatc ttatcatgtc tggctctagc tatcccgccc 540
ctaactccgc ccatcccgcc cctaactccg cccagttccg cccattctcc gccccatggc 600
tgactaattt tttttattta tgcagaggcc gaggccgcct cggcctctga gctattccag 660
aagtagtgag gaggcttttt tggaggccta gggacgtacc caattcgccc tatagtgagt 720
cgtattacgc gcgctcactg gccgtcgttt tacaacgtcg tgactgggaa aaccctggcg 780
ttacccaact taatcgcctt gcagcacatc cccctttcgc cagctggcgt aatagcgaag 840
aggcccgcac cgatcgccct tcccaacagt tgcgcagcct gaatggcgaa tgggacgcgc 900
cctgtagcgg cgcattaagc gcggcgggtg tggtggttac gcgcagcgtg accgctacac 960
ttgccagcgc cctagcgccc gctcctttcg ctttcttccc ttcctttctc gccacgttcg 1020
ccggctttcc ccgtcaagct ctaaatcggg ggctcccttt agggttccga tttagtgctt 1080
tacggcacct cgaccccaaa aaacttgatt agggtgatgg ttcacgtagt gggccatcgc 1140
cctgatagac ggtttttcgc cctttgacgt tggagtccac gttctttaat agtggactct 1200
tgttccaaac tggaacaaca ctcaacccta tctcggtcta ttcttttgat ttataaggga 1260
ttttgccgat ttcggcctat tggttaaaaa atgagctgat ttaacaaaaa tttaacgcga 1320
attttaacaa aatattaacg cttacaattt aggtggcact tttcggggaa atgtgcgcgg 1380
aacccctatt tgtttatttt tctaaataca ttcaaatatg tatccgctca tgagacaata 1440
accctgataa atgcttcaat aatattgaaa aaggaagagt atgagtattc aacatttccg 1500
tgtcgccctt attccctttt ttgcggcatt ttgccttcct gtttttgctc acccagaaac 1560
gctggtgaaa gtaaaagatg ctgaagatca gttgggtgca cgagtgggtt acatcgaact 1620
ggatctcaac agcggtaaga tccttgagag ttttcgcccc gaagaacgtt ttccaatgat 1680
gagcactttt aaagttctgc tatgtggcgc ggtattatcc cgtattgacg ccgggcaaga 1740
gcaactcggt cgccgcatac actattctca gaatgacttg gttgagtact caccagtcac 1800
agaaaagcat cttacggatg gcatgacagt aagagaatta tgcagtgctg ccataaccat 1860
gagtgataac actgcggcca acttacttct gacaacgatc ggaggaccga aggagctaac 1920
cgcttttttg cacaacatgg gggatcatgt aactcgcctt gatcgttggg aaccggagct 1980
gaatgaagcc ataccaaacg acgagcgtga caccacgatg cctgtagcaa tggcaacaac 2040
gttgcgcaaa ctattaactg gcgaactact tactctagct tcccggcaac aattaataga 2100
ctggatggag gcggataaag ttgcaggacc acttctgcgc tcggcccttc cggctggctg 2160
gtttattgct gataaatctg gagccggtga gcgtgggtct cgcggtatca ttgcagcact 2220
ggggccagat ggtaagccct cccgtatcgt agttatctac acgacgggga gtcaggcaac 2280
tatggatgaa cgaaatagac agatcgctga gataggtgcc tcactgatta agcattggta 2340
actgtcagac caagtttact catatatact ttagattgat ttaaaacttc atttttaatt 2400
taaaaggatc taggtgaaga tcctttttga taatctcatg accaaaatcc cttaacgtga 2460
gttttcgttc cactgagcgt cagaccccgt agaaaagatc aaaggatctt cttgagatcc 2520
tttttttctg cgcgtaatct gctgcttgca aacaaaaaaa ccaccgctac cagcggtggt 2580
ttgtttgccg gatcaagagc taccaactct ttttccgaag gtaactggct tcagcagagc 2640
gcagatacca aatactgttc ttctagtgta gccgtagtta ggccaccact tcaagaactc 2700
tgtagcaccg cctacatacc tcgctctgct aatcctgtta ccagtggctg ctgccagtgg 2760
cgataagtcg tgtcttaccg ggttggactc aagacgatag ttaccggata aggcgcagcg 2820
gtcgggctga acggggggtt cgtgcacaca gcccagcttg gagcgaacga cctacaccga 2880
actgagatac ctacagcgtg agctatgaga aagcgccacg cttcccgaag ggagaaaggc 2940
ggacaggtat ccggtaagcg gcagggtcgg aacaggagag cgcacgaggg agcttccagg 3000
gggaaacgcc tggtatcttt atagtcctgt cgggtttcgc cacctctgac ttgagcgtcg 3060
atttttgtga tgctcgtcag gggggcggag cctatggaaa aacgccagca acgcggcctt 3120
tttacggttc ctggcctttt gctggccttt tgctcacatg ttctttcctg cgttatcccc 3180
tgattctgtg gataaccgta ttaccgcctt tgagtgagct gataccgctc gccgcagccg 3240
aacgaccgag cgcagcgagt cagtgagcga ggaagcggaa gagcgcccaa tacgcaaacc 3300
gcctctcccc gcgcgttggc cgattcatta atgcagctgg cacgacaggt ttcccgactg 3360
gaaagcgggc agtgagcgca acgcaattaa tgtgagttag ctcactcatt aggcacccca 3420
ggctttacac tttatgcttc cggctcgtat gttgtgtgga attgtgagcg gataacaatt 3480
tcacacagga aacagctatg accatgatta cgccaagcgc gcaattaacc ctcactaaag 3540
ggaacaaaag ctggagctgc aagcttaatg tagtcttatg caatactctt gtagtcttgc 3600
aacatggtaa cgatgagtta gcaacatgcc ttacaaggag agaaaaagca ccgtgcatgc 3660
cgattggtgg aagtaaggtg gtacgatcgt gccttattag gaaggcaaca gacgggtctg 3720
acatggattg gacgaaccac tgaattgccg cattgcagag atattgtatt taagtgccta 3780
gctcgataca taaacgggtc tctctggtta gaccagatct gagcctggga gctctctggc 3840
taactaggga acccactgct taagcctcaa taaagcttgc cttgagtgct tcaagtagtg 3900
tgtgcccgtc tgttgtgtga ctctggtaac tagagatccc tcagaccctt ttagtcagtg 3960
tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaaggg aaaccagagg 4020
agctctctcg acgcaggact cggcttgctg aagcgcgcac ggcaagaggc gaggggcggc 4080
gactggtgag tacgccaaaa attttgacta gcggaggcta gaaggagaga gatgggtgcg 4140
agagcgtcag tattaagcgg gggagaatta gatcgcgatg ggaaaaaatt cggttaaggc 4200
cagggggaaa gaaaaaatat aaattaaaac atatagtatg ggcaagcagg gagctagaac 4260
gattcgcagt taatcctggc ctgttagaaa catcagaagg ctgtagacaa atactgggac 4320
agctacaacc atcccttcag acaggatcag aagaacttag atcattatat aatacagtag 4380
caaccctcta ttgtgtgcat caaaggatag agataaaaga caccaaggaa gctttagaca 4440
agatagagga agagcaaaac aaaagtaaga ccaccgcaca gcaagcggcc gctgatcttc 4500
agacctggag gaggagatat gagggacaat tggagaagtg aattatataa atataaagta 4560
gtaaaaattg aaccattagg agtagcaccc accaaggcaa agagaagagt ggtgcagaga 4620
gaaaaaagag cagtgggaat aggagctttg ttccttgggt tcttgggagc agcaggaagc 4680
actatgggcg cagcgtcaat gacgctgacg gtacaggcca gacaattatt gtctggtata 4740
gtgcagcagc agaacaattt gctgagggct attgaggcgc aacagcatct gttgcaactc 4800
acagtctggg gcatcaagca gctccaggca agaatcctgg ctgtggaaag atacctaaag 4860
gatcaacagc tcctggggat ttggggttgc tctggaaaac tcatttgcac cactgctgtg 4920
ccttggaatg ctagttggag taataaatct ctggaacaga tttggaatca cacgacctgg 4980
atggagtggg acagagaaat taacaattac acaagcttaa tacactcctt aattgaagaa 5040
tcgcaaaacc agcaagaaaa gaatgaacaa gaattattgg aattagataa atgggcaagt 5100
ttgtggaatt ggtttaacat aacaaattgg ctgtggtata taaaattatt cataatgata 5160
gtaggaggct tggtaggttt aagaatagtt tttgctgtac tttctatagt gaatagagtt 5220
aggcagggat attcaccatt atcgtttcag acccacctcc caaccccgag gggacccgac 5280
aggcccgaag gaatagaaga agaaggtgga gagagagaca gagacagatc cattcgatta 5340
gtgaacggat ctcgacggta tcgattagac tgtagcccag gaatatggca gctagattgt 5400
acacatttag aaggaaaagt tatcttggta gcagttcatg tagccagtgg atatatagaa 5460
gcagaagtaa ttccagcaga gacagggcaa gaaacagcat acttcctctt aaaattagca 5520
ggaagatggc cagtaaaaac agtacataca gacaatggca gcaatttcac cagtactaca 5580
gttaaggccg cctgttggtg ggcggggatc aagcaggaat ttggcattcc ctacaatccc 5640
caaagtcaag gagtaataga atctatgaat aaagaattaa agaaaattat aggacaggta 5700
agagatcagg ctgaacatct taagacagca gtacaaatgg cagtattcat ccacaatttt 5760
aaaagaaaag gggggattgg ggggtacagt gcaggggaaa gaatagtaga cataatagca 5820
acagacatac aaactaaaga attacaaaaa caaattacaa aaattcaaaa ttttcgggtt 5880
tattacaggg acagcagaga tccagtttgg 5910
<210> 11
<211> 20
<212> DNA
<213> Artificial Sequence
<220>
<223> SgRNA sequence
<400> 11
gatggagagc gtatgttaac 20

Claims (10)

1. An alpha-globin overexpression vector comprising, in order: (1) a locus control region, an alpha-globin promoter, an HBA2 gene and an HBA2 gene 3' sequence fragment, wherein the locus control region is HS 40;
or (2) locus control regions HS4, HS3 and HS2, the β -globin promoter, the HBA2 gene and the 3' sequence fragment of the HBB gene.
2. The α -globin overexpression vector according to claim 1, comprising in sequence the cis-acting element consisting of the locus control region HS40 and the α -globin promoter, the HBA2 gene and the 3' sequence fragment of the HBA2 gene.
3. The α -globin overexpression vector according to claim 1 or 2, wherein said α -globin promoter is the HBA2 promoter; preferably, the alpha-globin promoter comprises the sequence shown in SEQ ID NO. 2;
and/or the locus control region HS40 comprises a sequence shown as SEQ ID NO. 1;
and/or the 3' sequence fragment of the HBA2 gene comprises a sequence shown as SEQ ID NO. 4.
4. The α -globin overexpression vector according to claim 1, wherein said β -globin promoter is HBB promoter; preferably, the beta-globin promoter comprises a sequence shown as SEQ ID NO. 8;
and/or the locus control region HS4 comprises a sequence shown as SEQ ID NO. 5, the locus control region HS3 comprises a sequence shown as SEQ ID NO. 6, and the locus control region HS2 comprises a sequence shown as SEQ ID NO. 7;
and/or the HBB gene 3' sequence fragment comprises a sequence shown as SEQ ID NO. 9.
5. The alpha-globin overexpression vector according to any one of claims 1 to 4, wherein said HBA2 gene comprises the sequence shown in SEQ ID NO. 3.
6. The α -globin overexpression vector according to any one of claims 1 to 5, wherein the plasmid vector is a Lenti vector;
preferably, the Lenti vector comprises a sequence shown as SEQ ID NO. 10.
7. A transformant comprising the α -globin overexpression vector of any one of claims 1 to 6;
preferably, the host cell of the transformant is a erythroid cell;
more preferably, the host cell of the transformant is HUDEP2 or CD34 + Hematopoietic stem cells.
8. A lentiviral vector system comprising the alpha-globin overexpression vector of any one of claims 1 to 6;
preferably, the lentiviral vector system further comprises psPAX2 and a pCAG-VSVG plasmid.
9. Use of an alpha-globin overexpression vector as defined in any one of claims 1 to 6 for the preparation of a formulation for the treatment of thalassemia; preferably, the thalassemia is alpha-thalassemia.
10. Use of HS40, the α -globin promoter or the HBA2 gene 3 'sequence fragment as defined in any one of claims 1 to 3, of HS4, HS3, HS2, the β -globin promoter or the HBB gene 3' sequence fragment as defined in claim 1 or 4 in the construction of an HBA2 overexpression vector;
preferably, the vector is a lentiviral vector.
CN202110304017.6A 2021-03-22 2021-03-22 Alpha-globin overexpression vector and application thereof Pending CN115125270A (en)

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US6022738A (en) * 1995-03-03 2000-02-08 Mount Sinai School Of Medicine Of The City University Of New York Vectors for expression of globin genes
RU2716974C2 (en) * 2015-03-31 2020-03-17 Гликотоп Гмбх Eukaryotic expression vectors containing regulatory elements of globin gene clusters
CN109294994B (en) * 2018-06-08 2021-11-16 海南医学院 Method for effectively repairing Westmead mutation of thalassemia and application
CN110106203B (en) * 2019-05-24 2023-08-11 中国医学科学院血液病医院(血液学研究所) Novel HBB (heterojunction bipolar transistor) overexpression vector and design method and application thereof
CN110564770B (en) * 2019-07-29 2021-06-11 上海本导基因技术有限公司 Lentiviral vector suitable for gene therapy of thalassemia and sickle anemia
CN111363756B (en) * 2020-04-02 2023-01-17 中国医学科学院血液病医院(中国医学科学院血液学研究所) Globin gene dual-expression lentiviral vector and application thereof

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