CN114921508A - Biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid - Google Patents
Biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid Download PDFInfo
- Publication number
- CN114921508A CN114921508A CN202210865238.5A CN202210865238A CN114921508A CN 114921508 A CN114921508 A CN 114921508A CN 202210865238 A CN202210865238 A CN 202210865238A CN 114921508 A CN114921508 A CN 114921508A
- Authority
- CN
- China
- Prior art keywords
- formula
- compound
- coenzyme
- reaction system
- reaction
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 238000002360 preparation method Methods 0.000 title claims abstract description 15
- FMAXZGMMJCWXNS-SSDOTTSWSA-N (3R)-6-hydroxy-3,4-dihydro-2H-chromene-3-carboxylic acid Chemical compound OC([C@H](CC1=C2)COC1=CC=C2O)=O FMAXZGMMJCWXNS-SSDOTTSWSA-N 0.000 title claims abstract description 14
- 230000002210 biocatalytic effect Effects 0.000 title claims abstract description 10
- 238000006243 chemical reaction Methods 0.000 claims abstract description 95
- 150000001875 compounds Chemical class 0.000 claims abstract description 78
- 239000005515 coenzyme Substances 0.000 claims abstract description 47
- 150000001336 alkenes Chemical class 0.000 claims abstract description 35
- 239000000758 substrate Substances 0.000 claims abstract description 30
- 238000000034 method Methods 0.000 claims abstract description 20
- 208000001901 epithelial recurrent erosion dystrophy Diseases 0.000 claims abstract description 19
- 238000006722 reduction reaction Methods 0.000 claims abstract description 5
- 238000006555 catalytic reaction Methods 0.000 claims abstract description 4
- 239000007788 liquid Substances 0.000 claims abstract description 4
- 108090000854 Oxidoreductases Proteins 0.000 claims description 44
- 102000004316 Oxidoreductases Human genes 0.000 claims description 44
- 102000004190 Enzymes Human genes 0.000 claims description 21
- 108090000790 Enzymes Proteins 0.000 claims description 21
- LMBFAGIMSUYTBN-MPZNNTNKSA-N teixobactin Chemical compound C([C@H](C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(=O)N[C@H](CCC(N)=O)C(=O)N[C@H]([C@@H](C)CC)C(=O)N[C@@H]([C@@H](C)CC)C(=O)N[C@@H](CO)C(=O)N[C@H]1C(N[C@@H](C)C(=O)N[C@@H](C[C@@H]2NC(=N)NC2)C(=O)N[C@H](C(=O)O[C@H]1C)[C@@H](C)CC)=O)NC)C1=CC=CC=C1 LMBFAGIMSUYTBN-MPZNNTNKSA-N 0.000 claims description 16
- XJLXINKUBYWONI-DQQFMEOOSA-N [[(2r,3r,4r,5r)-5-(6-aminopurin-9-yl)-3-hydroxy-4-phosphonooxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2s,3r,4s,5s)-5-(3-carbamoylpyridin-1-ium-1-yl)-3,4-dihydroxyoxolan-2-yl]methyl phosphate Chemical compound NC(=O)C1=CC=C[N+]([C@@H]2[C@H]([C@@H](O)[C@H](COP([O-])(=O)OP(O)(=O)OC[C@@H]3[C@H]([C@@H](OP(O)(O)=O)[C@@H](O3)N3C4=NC=NC(N)=C4N=C3)O)O2)O)=C1 XJLXINKUBYWONI-DQQFMEOOSA-N 0.000 claims description 13
- 230000008929 regeneration Effects 0.000 claims description 13
- 238000011069 regeneration method Methods 0.000 claims description 13
- 108010050375 Glucose 1-Dehydrogenase Proteins 0.000 claims description 11
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 claims description 10
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 claims description 10
- 239000008103 glucose Substances 0.000 claims description 10
- 230000001590 oxidative effect Effects 0.000 claims description 10
- 229930027945 nicotinamide-adenine dinucleotide Natural products 0.000 claims description 6
- 230000035484 reaction time Effects 0.000 claims description 5
- 102000007698 Alcohol dehydrogenase Human genes 0.000 claims description 4
- 108010021809 Alcohol dehydrogenase Proteins 0.000 claims description 4
- 108090000698 Formate Dehydrogenases Proteins 0.000 claims description 4
- VZTDIZULWFCMLS-UHFFFAOYSA-N ammonium formate Chemical compound [NH4+].[O-]C=O VZTDIZULWFCMLS-UHFFFAOYSA-N 0.000 claims description 4
- 238000006911 enzymatic reaction Methods 0.000 claims description 4
- BOPGDPNILDQYTO-NNYOXOHSSA-N nicotinamide-adenine dinucleotide Chemical compound C1=CCC(C(=O)N)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OC[C@@H]2[C@H]([C@@H](O)[C@@H](O2)N2C3=NC=NC(N)=C3N=C2)O)O1 BOPGDPNILDQYTO-NNYOXOHSSA-N 0.000 claims description 3
- 239000003125 aqueous solvent Substances 0.000 claims description 2
- WQZGKKKJIJFFOK-VFUOTHLCSA-N beta-D-glucose Chemical compound OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-VFUOTHLCSA-N 0.000 claims description 2
- 230000003287 optical effect Effects 0.000 abstract description 4
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical group OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 12
- 239000006184 cosolvent Substances 0.000 description 12
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N dimethyl sulfoxide Natural products CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 11
- 239000000047 product Substances 0.000 description 7
- HBAQYPYDRFILMT-UHFFFAOYSA-N 8-[3-(1-cyclopropylpyrazol-4-yl)-1H-pyrazolo[4,3-d]pyrimidin-5-yl]-3-methyl-3,8-diazabicyclo[3.2.1]octan-2-one Chemical class C1(CC1)N1N=CC(=C1)C1=NNC2=C1N=C(N=C2)N1C2C(N(CC1CC2)C)=O HBAQYPYDRFILMT-UHFFFAOYSA-N 0.000 description 6
- 239000000872 buffer Substances 0.000 description 6
- 239000002904 solvent Substances 0.000 description 6
- 108091007187 Reductases Proteins 0.000 description 5
- LOKCTEFSRHRXRJ-UHFFFAOYSA-I dipotassium trisodium dihydrogen phosphate hydrogen phosphate dichloride Chemical group P(=O)(O)(O)[O-].[K+].P(=O)(O)([O-])[O-].[Na+].[Na+].[Cl-].[K+].[Cl-].[Na+] LOKCTEFSRHRXRJ-UHFFFAOYSA-I 0.000 description 5
- 239000002953 phosphate buffered saline Substances 0.000 description 5
- 239000000243 solution Substances 0.000 description 5
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 4
- 239000007853 buffer solution Substances 0.000 description 4
- 239000003112 inhibitor Substances 0.000 description 4
- 239000008055 phosphate buffer solution Substances 0.000 description 4
- 239000000126 substance Substances 0.000 description 4
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 3
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 3
- YXFVVABEGXRONW-UHFFFAOYSA-N Toluene Chemical compound CC1=CC=CC=C1 YXFVVABEGXRONW-UHFFFAOYSA-N 0.000 description 3
- 102100025093 Zinc fingers and homeoboxes protein 2 Human genes 0.000 description 3
- 238000001914 filtration Methods 0.000 description 3
- 230000008569 process Effects 0.000 description 3
- 238000004808 supercritical fluid chromatography Methods 0.000 description 3
- 238000012360 testing method Methods 0.000 description 3
- QKNYBSVHEMOAJP-UHFFFAOYSA-N 2-amino-2-(hydroxymethyl)propane-1,3-diol;hydron;chloride Chemical compound Cl.OCC(N)(CO)CO QKNYBSVHEMOAJP-UHFFFAOYSA-N 0.000 description 2
- 102000018471 Proto-Oncogene Proteins B-raf Human genes 0.000 description 2
- 108010091528 Proto-Oncogene Proteins B-raf Proteins 0.000 description 2
- GSEJCLTVZPLZKY-UHFFFAOYSA-N Triethanolamine Chemical class OCCN(CCO)CCO GSEJCLTVZPLZKY-UHFFFAOYSA-N 0.000 description 2
- 238000002835 absorbance Methods 0.000 description 2
- 238000010521 absorption reaction Methods 0.000 description 2
- GZCGUPFRVQAUEE-VANKVMQKSA-N aldehydo-L-glucose Chemical compound OC[C@H](O)[C@H](O)[C@@H](O)[C@H](O)C=O GZCGUPFRVQAUEE-VANKVMQKSA-N 0.000 description 2
- 239000003054 catalyst Substances 0.000 description 2
- 208000012839 conversion disease Diseases 0.000 description 2
- 238000001514 detection method Methods 0.000 description 2
- 239000003814 drug Substances 0.000 description 2
- 229940079593 drug Drugs 0.000 description 2
- 230000000694 effects Effects 0.000 description 2
- 238000002474 experimental method Methods 0.000 description 2
- 238000000605 extraction Methods 0.000 description 2
- KIUAERUGDCOOSB-UHFFFAOYSA-N hydron;trimethylazanium;sulfate Chemical compound CN(C)C.OS(O)(=O)=O KIUAERUGDCOOSB-UHFFFAOYSA-N 0.000 description 2
- 238000009776 industrial production Methods 0.000 description 2
- 239000003446 ligand Substances 0.000 description 2
- 230000014759 maintenance of location Effects 0.000 description 2
- 239000000463 material Substances 0.000 description 2
- 239000000843 powder Substances 0.000 description 2
- 230000009467 reduction Effects 0.000 description 2
- 238000012216 screening Methods 0.000 description 2
- 238000001228 spectrum Methods 0.000 description 2
- GETQZCLCWQTVFV-UHFFFAOYSA-N trimethylamine Chemical class CN(C)C GETQZCLCWQTVFV-UHFFFAOYSA-N 0.000 description 2
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 2
- HTSGKJQDMSTCGS-UHFFFAOYSA-N 1,4-bis(4-chlorophenyl)-2-(4-methylphenyl)sulfonylbutane-1,4-dione Chemical compound C1=CC(C)=CC=C1S(=O)(=O)C(C(=O)C=1C=CC(Cl)=CC=1)CC(=O)C1=CC=C(Cl)C=C1 HTSGKJQDMSTCGS-UHFFFAOYSA-N 0.000 description 1
- VBHVAOHRNSIOAI-UHFFFAOYSA-N 6-hydroxy-2h-chromene-3-carboxylic acid Chemical compound OC1=CC=C2OCC(C(=O)O)=CC2=C1 VBHVAOHRNSIOAI-UHFFFAOYSA-N 0.000 description 1
- 108010093096 Immobilized Enzymes Proteins 0.000 description 1
- PIWKPBJCKXDKJR-UHFFFAOYSA-N Isoflurane Chemical compound FC(F)OC(Cl)C(F)(F)F PIWKPBJCKXDKJR-UHFFFAOYSA-N 0.000 description 1
- 101710141955 RAF proto-oncogene serine/threonine-protein kinase Proteins 0.000 description 1
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 1
- 241001052560 Thallis Species 0.000 description 1
- 230000003321 amplification Effects 0.000 description 1
- 230000001580 bacterial effect Effects 0.000 description 1
- 230000004071 biological effect Effects 0.000 description 1
- 230000015572 biosynthetic process Effects 0.000 description 1
- 239000011203 carbon fibre reinforced carbon Substances 0.000 description 1
- 238000009903 catalytic hydrogenation reaction Methods 0.000 description 1
- 238000010531 catalytic reduction reaction Methods 0.000 description 1
- 238000005119 centrifugation Methods 0.000 description 1
- 239000003153 chemical reaction reagent Substances 0.000 description 1
- 238000004587 chromatography analysis Methods 0.000 description 1
- 230000000052 comparative effect Effects 0.000 description 1
- 239000000706 filtrate Substances 0.000 description 1
- 238000010438 heat treatment Methods 0.000 description 1
- 238000005984 hydrogenation reaction Methods 0.000 description 1
- 239000000543 intermediate Substances 0.000 description 1
- 229960002725 isoflurane Drugs 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 239000000203 mixture Substances 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000010369 molecular cloning Methods 0.000 description 1
- 229910000510 noble metal Inorganic materials 0.000 description 1
- 238000003199 nucleic acid amplification method Methods 0.000 description 1
- 238000005580 one pot reaction Methods 0.000 description 1
- 239000012044 organic layer Substances 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 108090000623 proteins and genes Proteins 0.000 description 1
- 238000006479 redox reaction Methods 0.000 description 1
- 230000008261 resistance mechanism Effects 0.000 description 1
- 230000027756 respiratory electron transport chain Effects 0.000 description 1
- 150000003839 salts Chemical class 0.000 description 1
- 229920006395 saturated elastomer Polymers 0.000 description 1
- 238000000926 separation method Methods 0.000 description 1
- 238000003756 stirring Methods 0.000 description 1
- 239000006228 supernatant Substances 0.000 description 1
- 238000010189 synthetic method Methods 0.000 description 1
Images
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P17/00—Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms
- C12P17/02—Oxygen as only ring hetero atoms
- C12P17/06—Oxygen as only ring hetero atoms containing a six-membered hetero ring, e.g. fluorescein
Landscapes
- Organic Chemistry (AREA)
- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Life Sciences & Earth Sciences (AREA)
- Wood Science & Technology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Microbiology (AREA)
- General Chemical & Material Sciences (AREA)
- Biotechnology (AREA)
- Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Abstract
The invention discloses a biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid, which comprises the following steps: in a liquid reaction system, taking a compound shown in a formula I as a substrate, and carrying out asymmetric reduction reaction under the catalysis of alkene reductase in the presence of coenzyme to form a compound shown in a formula II; step (b) of separating the compound of formula (II) from the reaction system after the reaction of step (a); wherein the alkene reductase is selected from: alkene reductase ERED-16323 or ERED-1663. The invention also provides a reaction system. The method has the advantages of short steps, mild conditions, high conversion rate and high optical purity of the product.
Description
Technical Field
The invention belongs to the technical field of medicines, and particularly relates to a biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid.
Background
US patent No. US10183939B2 discloses a class of structurally novel racemic RAF inhibitors that demonstrate binding affinity for B-RAF V600E and C-RAF, and these pan-RAF inhibitors are considered promising candidates to overcome the resistance mechanisms associated with clinically approved B-RAF selective drugs. Wherein, the examples describe that the racemic RAF inhibitor can be resolved by a chromatographic column to obtain two single configuration enantiomers, and the biological activity data of the two single configuration enantiomers show significant differences (such as IC of compounds 3A and 3B) 50 Values differ by a factor of about 10). Therefore, it is of practical interest to develop a process for the preparation of enantiomers of a single configuration.
The compound (R) -6-hydroxy chroman-3-carboxylic acid and derivatives thereof are key chiral intermediates for preparing the single-configuration RAF inhibitor, and the current synthetic method is to use a noble metal catalyst and a chiral ligand to perform catalytic hydrogenation reduction on the 6-hydroxy-2H-chromene-3-carboxylic acid to obtain the compound. The method has the problems of poor product stereoselectivity, poor yield, low atom economy, high price of the catalyst and the chiral ligand, harsh hydrogenation conditions, high use safety risk and the like.
Therefore, there is a need in the art to develop a novel preparation method of (R) -6-hydroxychroman-3-carboxylic acid and its derivatives.
Disclosure of Invention
The invention aims to provide a preparation method of (R) -6-hydroxy chroman-3-carboxylic acid, which has the advantages of high substrate conversion rate, high optical purity of products, mild reaction conditions, simple and convenient operation and easy industrial production.
In a first aspect of the present invention, there is provided a biocatalytic preparation method of (R) -6-hydroxychroman-3-carboxylic acid, comprising the steps of:
in a liquid reaction system, taking a compound shown in a formula I as a substrate, and carrying out asymmetric reduction reaction under the catalysis of alkene reductase in the presence of coenzyme to form a compound shown in a formula II;
step (b) of separating the compound of formula (II) from the reaction system after the reaction of step (a);
wherein the alkene reductase is selected from: 1) the alkene reductase ERED-16323 has a Genbank serial number of WP-014096091; or 2) an ene reductase ERED-1663 with Genbank accession number NC-015687.
In some embodiments, the concentration of the compound of formula I in the reaction system is from 0.1 to 500 g/L.
Preferably, the concentration of the compound of formula I in the reaction system is 1g/L or more, 10g/L or more, 25g/L or more, 50g/L or more, 75g/L or more, 100g/L or more, 125g/L or more, 150g/L or more, 175g/L or more, 200g/L or more, 220g/L or more, 240g/L or more, 260g/L or more, 280g/L or more, 300g/L or more, 320g/L or more, 350g/L or more, 400g/L or more, or 450g/L or more.
Preferably, in the reaction system, the concentration of the compound shown in the formula I is 1-500 g/L; more preferably, in the reaction system, the concentration of the compound shown in the formula I is 10-400 g/L; most preferably, the concentration of the compound of formula I in the reaction system is 50-350 g/L.
In some embodiments, in the reaction system, the mass ratio (w/w) of the alkene reductase to the compound of formula I is (0.01-20): 1. preferably, the mass ratio (w/w) of the alkene reductase to the compound of formula I is (0.01-10): 1. more preferably, the mass ratio (w/w) of the alkene reductase to the compound of the formula I is (0.1-10): 1.
in some embodiments, the coenzyme is selected from the group consisting of: a reducing coenzyme, an oxidizing coenzyme, or a combination thereof.
In some embodiments, the reducing coenzyme is selected from the group consisting of: NADH, NADPH, or a combination thereof.
In some embodiments, the oxidative coenzyme is selected from the group consisting of: NAD +, NADP +, or combinations thereof. Preferably, the oxidative coenzyme is selected from NADP +. Preferably, the oxidative coenzyme is selected from NAD +.
In some embodiments, the mass ratio (w/w) of the coenzyme to the compound of formula I is (0.0001-1): 1. preferably, the mass ratio (w/w) of the coenzyme to the compound of formula I is (0.0001-0.3): 1. more preferably, the mass ratio (w/w) of the coenzyme to the compound of formula I is (0.01-0.3): 1.
in some embodiments, an enzyme for coenzyme regeneration is also present in the reaction system. Preferably, the enzyme for coenzyme regeneration is selected from the group consisting of: glucose dehydrogenase, alcohol dehydrogenase, formate dehydrogenase, or a combination thereof. More preferably, the enzyme for coenzyme regeneration is selected from the group consisting of: a glucose dehydrogenase.
In some embodiments, the mass ratio (w/w) of the enzyme for coenzyme regeneration to the compound of formula I in the reaction system is (0.01-10): 1. preferably, the mass ratio (w/w) of the enzyme for coenzyme regeneration to the compound of formula I is (0.01-6): 1. more preferably, the mass ratio (w/w) of the enzyme for coenzyme regeneration to the compound of formula I is (0.1-2): 1.
in some embodiments, a co-substrate is also present in the reaction system. Preferably, the co-substrate is selected from: isopropanol, glucose, ammonium formate, or a combination thereof. More preferably, the co-substrate is selected from: and (3) glucose.
In some embodiments, the reaction system has a mass ratio (w/w) of the co-substrate to the compound of formula I of (0.1-20): 1. preferably, the mass ratio (w/w) of the co-substrate to the compound of formula I is (1-10): 1. preferably, the mass ratio (w/w) of the co-substrate to the compound of formula I is (1-5): 1.
in some embodiments, the combination of the enzyme for coenzyme regeneration and the co-substrate in the reaction system is selected from the group consisting of: (1) glucose dehydrogenase and glucose; (2) alcohol dehydrogenase and isopropanol; or (3) formate dehydrogenase with ammonium formate. Preferably, the combination of the enzyme for coenzyme regeneration and the co-substrate is selected from the group consisting of: glucose dehydrogenase and glucose.
In some embodiments, in step (a), the reaction temperature is from 5 ℃ to 50 ℃. Preferably, the reaction temperature is 15 ℃ to 45 ℃. More preferably, the reaction temperature is 20 ℃ to 40 ℃. Most preferably, the reaction temperature is from 25 ℃ to 35 ℃.
In some embodiments, the reaction time in step (a) is 0.1 to 120 hours. Preferably, the reaction time is 0.2 to 72 hours. More preferably, the reaction time is 0.5 to 48 hours. Most preferably, the reaction time is 1 to 24 hours.
In some embodiments, in the step (a), the pH of the reaction system is 5.5 to 9.5. Preferably, the pH is 6.0 to 8.5. More preferably, the pH is 6.5 to 8.0. Preferably, the pH is 6.5 to 7.5.
In some embodiments, the alkene reductase is present in the reaction system in the form of: an enzyme in free form, an immobilized enzyme, or an enzyme in the form of bacterial cells.
In some embodiments, the reaction system is an aqueous system.
In some embodiments, the buffer of the reaction system is Phosphate Buffered Saline (PBS), TRIS-methylamine salt buffer (TRIS-HCl), TRIS-methylamine sulfate buffer (TRIS-H) 2 SO 4 ) Or triethanolamine salt buffer (TOEA) or a combination thereof. Preferably, the buffer of the reaction system is Phosphate Buffered Saline (PBS).
In some embodiments, the reaction system contains a solvent selected from the group consisting of: water, alcohol, or a combination thereof.
In some embodiments, the reaction system may also contain a co-solvent. Preferably, the co-solvent is selected from dimethyl sulfoxide.
In some embodiments, the volume to mass ratio of the co-solvent to the compound of formula I is from 0.1 to 20 mL/g. Preferably, the volume-mass ratio of the cosolvent to the compound of the formula I is 1-10 mL/g. More preferably, the volume-to-mass ratio of the cosolvent to the compound of the formula I is 2-5 mL/g.
In some embodiments, in step (b), the separating comprises: heating to inactivate protein, centrifuging or filtering, extracting the filtrate with an extraction solvent, and concentrating the organic layer.
In some embodiments, in step (b), the extraction solvent is methanol.
In some embodiments, in the step (b), the e.e. value of the compound of formula II in the reaction system after the reaction is more than or equal to 99%.
In some embodiments, in step (b), ≧ 30% of the compound of formula I is converted into the compound of formula II in the reaction system after the reaction. Preferably, not less than 32% of the compound of formula I is converted into the compound of formula II. More preferably, not less than 34% of the compound of formula I is converted to the compound of formula II.
In a second aspect, the present invention provides a reaction system comprising:
(1) an aqueous solvent;
(2) a substrate which is a compound of formula I;
(3) a coenzyme;
(4) an alkene reductase; the alkene reductase is selected from: 1) the Genbank serial number of the ene reductase ERED-16323 is WP-014096091; or 2) ERED-1663 with Genbank accession number NC-015687;
(5) a co-substrate.
In some embodiments, the reaction system further comprises: (6) an enzyme for coenzyme regeneration.
In some embodiments, the concentration of the compound of formula I in the reaction system is from 0.1 to 500 g/L.
Preferably, the concentration of the compound of formula I in the reaction system is 1g/L or more, 10g/L or more, 25g/L or more, 50g/L or more, 75g/L or more, 100g/L or more, 125g/L or more, 150g/L or more, 175g/L or more, 200g/L or more, 220g/L or more, 240g/L or more, 260g/L or more, 280g/L or more, 300g/L or more, 320g/L or more, 350g/L or more, 400g/L or more, or 450g/L or more.
Preferably, in the reaction system, the concentration of the compound shown in the formula I is 1-500 g/L; more preferably, in the reaction system, the concentration of the compound shown in the formula I is 10-400 g/L; most preferably, the concentration of the compound of formula I in the reaction system is 50-350 g/L.
In some embodiments, the mass ratio (w/w) of the alkene reductase to the compound of formula I in the reaction system is (0.01-20): 1. preferably, the mass ratio (w/w) of the alkene reductase to the compound of the formula I is (0.01-10): 1. more preferably, the mass ratio (w/w) of the alkene reductase to the compound of the formula I is (0.1-10): 1.
in some embodiments, the e.e. value of the compound of formula II in the reacted reaction system is 99% or more.
In some embodiments, ≧ 30% of the compound of formula I is converted into the compound of formula II in the reaction system after the reaction. Preferably, not less than 32% of the compound of formula I is converted into the compound of formula II. More preferably, not less than 34% of the compound of formula I is converted to the compound of formula II.
The reaction system provided by the invention can carry out enzymatic reaction, and can prepare (R) -6-hydroxy chroman-3-carboxylic acid with high stereoselectivity, and the optical purity is that the e.e. value is more than or equal to 99%.
In a third aspect, the present invention also provides a biocatalytic preparation method of (R) -6-hydroxychroman-3-carboxylic acid, comprising: carrying out an enzymatic reaction using a reaction system according to the second aspect of the invention, thereby producing a compound of formula II:
in some embodiments, the concentration of the compound of formula I in the reaction system is from 0.1 to 500 g/L.
Preferably, the concentration of the compound of formula I in the reaction system is 1g/L or more, 10g/L or more, 25g/L or more, 50g/L or more, 75g/L or more, 100g/L or more, 125g/L or more, 150g/L or more, 175g/L or more, 200g/L or more, 220g/L or more, 240g/L or more, 260g/L or more, 280g/L or more, 300g/L or more, 320g/L or more, 350g/L or more, 400g/L or more, or 450g/L or more.
Preferably, in the reaction system, the concentration of the compound shown in the formula I is 1-500 g/L; more preferably, in the reaction system, the concentration of the compound shown in the formula I is 10-400 g/L; most preferably, the concentration of the compound of formula I in the reaction system is 50-350 g/L.
In some embodiments, in the method, the mass ratio (w/w) of the alkene reductase to the compound of formula I in the reaction system is (0.01-20): 1. preferably, the mass ratio (w/w) of the alkene reductase to the compound of the formula I is (0.01-10): 1. more preferably, the mass ratio (w/w) of the alkene reductase to the compound of the formula I is (0.1-10): 1.
in some embodiments, in the method, the e.e. value of the compound of formula II in the reaction system after the reaction is 99% or more.
In some embodiments, the method comprises converting ≧ 30% of the compound of formula I into the compound of formula II in the reaction system after the reaction. Preferably, not less than 32% of the compound of formula I is converted into the compound of formula II. More preferably, not less than 34% of the compound of formula I is converted to the compound of formula II.
Technical terms
Alkene reductase
In the present invention, an "ene reductase" is an enzyme capable of stereoselectively catalyzing the reduction of a carbon-carbon double bond to obtain an optically active saturated compound. One typical ene reductase is ene reductase ERED-16323, Genbank accession No. WP _ 014096091; or the ene reductase ERED-1663 with Genbank accession number NC-015687.
The reaction system may be commercially available, for example, using wet cells, crude enzyme solution, crude enzyme powder, or pure enzyme of the above-mentioned alkene reductase.
Coenzyme
In the present invention, "coenzyme" means a coenzyme capable of effecting electron transfer in a redox reaction.
Typically, the coenzyme of the invention is a reducing coenzyme or an oxidizing coenzyme, the reducing coenzyme being NADH or NADPH and the oxidizing coenzyme being NAD + or NADP +. Since the price and cost of the reducing coenzyme are expensive, it is preferable to select the oxidizing coenzyme NAD + or NADP +.
When selecting an oxidative coenzyme, it is necessary to select a method for realizing coenzyme regeneration, which mainly includes three methods: (1) glucose dehydrogenase and cosubstrate glucose, (2) alcohol dehydrogenase and cosubstrate isopropanol, and (3) formate dehydrogenase and cosubstrate ammonium formate.
In a preferred embodiment, the coenzyme is NADP +, the coenzyme regeneration system is a glucose dehydrogenase, and the glucose dehydrogenase and the co-substrate glucose are preferred in the present invention. The ratio of the dosage of the NADP + to the dosage of the compound shown in the formula I is 0.01-30.0% (w/w). The buffer system is Phosphate Buffer Solution (PBS), TRIS-methylamine salt buffer solution (TRIS-HCl), TRIS-methylamine sulfate buffer solution (TRIS-H) 2 SO 4 ) Or triethanolamine salt buffer (TOEA) or a combination thereof at a concentration of 0.1 mol/L. The pH value of the buffer solution is 5.5-9.5.
Cosolvent
In the present invention, a co-solvent may be added or not added to the reaction system.
As used herein, the term "co-solvent" refers to a sparingly soluble substance that forms a soluble intermolecular complex, association, double salt, or the like with an added third substance in a solvent to increase the solubility of the sparingly soluble substance in the solvent. This third material is referred to as a co-solvent.
In the present invention, the water solubility of the substrate compound is poor, and when the substrate concentration is increased, the reaction conversion rate is seriously affected. Thus, the substrate solubility can be increased by adding a co-solvent to improve the reaction conversion. Optional co-solvents are dimethyl sulfoxide, methanol, ethanol, isopropanol, acetonitrile, toluene, acetone or combinations thereof, preferably dimethyl sulfoxide.
Stereoisomers
In the present invention, stereoisomers are isomers produced by different arrangement of atoms in a molecule, and can be divided into cis-trans isomers and enantiomers, and also can be divided into two broad categories, namely enantiomers and diastereomers. In a chemical or enzymatic reaction, one stereoisomer is preferentially formed over the other, referred to as stereoselectivity. Stereoselectivity can be partial, where the formation of one stereoisomer is favored over another, or it can be complete, where only one stereoisomer is formed. When a stereoisomer is an enantiomer, stereoselectivity refers to enantioselectivity, i.e., the fraction (usually reported as a percentage) of one enantiomer in the sum of the two enantiomers. It (typically a percentage) is optionally reported in the art as an enantiomeric excess (e.e.) calculated therefrom according to the following formula: [ major enantiomer-minor enantiomer ]/[ major enantiomer + minor enantiomer ]. Where the stereoisomers are diastereomers, stereoselectivity refers to diastereomeric selectivity, i.e., the fraction of one diastereomer in a mixture of two diastereomers (usually reported as a percentage), usually optionally reported as diastereomeric excess (d.e.). Enantiomeric excess and diastereomeric excess are types of stereoisomeric excess. In the present invention, substantially stereoisomerically pure, enzymes are capable of converting a substrate to the corresponding product with at least about 95%, 96%, 97%, 98% or 99% stereoisomeric excess; preferably, at least about 98% stereoisomeric excess; more preferably, at least about 99% stereoisomeric excess.
Biocatalytic preparation method
The invention provides a method for preparing a compound of a formula II by catalytic reduction of a compound of a formula I from a commercially available alkene reductase (ERED-16323 or ERED-1663). The reaction formula is shown as follows:
one specific implementation process of the preparation method is as follows: fully dissolving a substrate in a cosolvent such as dimethyl sulfoxide, adding the cosolvent into a phosphate buffer solution, uniformly stirring, adding wet thalli, crude enzyme liquid, crude enzyme powder or pure enzyme of alkene reductase, adding coenzyme NADP +, glucose dehydrogenase and cosubstrate glucose, and maintaining the temperature at 5-50 ℃ for 0.1-120 hours. After the reaction is finished, adding methanol into the reaction solution, centrifuging and/or filtering by diatomite, taking supernatant, detecting and separating chiral compounds by using a super-junction chromatography, and concentrating the collected solution to obtain a product.
The present inventors have made extensive and intensive studies and, as a result of extensive screening experiments, have, for the first time, unexpectedly developed a process for the biological production of (R) -6-hydroxychroman-3-carboxylic acid, in which an ene reductase has high stereoselectivity for the product and specificity for the substrate.
The main advantages of the present invention include:
1) compared with the prior art, the alkene reductase screened by the application and the preparation method thereof are used for preparing the compound shown in the formula II, and the compound has the advantages of high yield and low cost.
2) The alkene reductase screened by the application has high stereoselectivity to the product of the compound shown in the formula II, the optical purity of the product is high, and the e.e. value reaches more than 99%.
3) The alkene reductases screened by the present application are specific for the substrate compound of formula I.
4) The alkene reductase screened by the method can be used for preparing the compound of the formula II from the compound of the formula I through one-step reaction, the reaction steps are short, the reaction conditions are mild, only centrifugal filtration is needed for post-treatment, the operation is simple and convenient, and the industrial production is easy to realize.
Drawings
FIG. 1 is a racemate chiral spectrum of a compound shown in a formula II, wherein the retention time of an S configuration is 5.826 min, and the retention time of an R configuration is 6.486 min; in the figure, the abscissa represents time, and the ordinate represents absorbance.
FIG. 2 is a chiral spectrum of a compound of formula II obtained by the catalysis of the alkenylreductase of the present application, showing that the e.e. value of R configuration is more than 99%; in the figure, the abscissa represents time, and the ordinate represents absorbance.
Detailed Description
The technical solutions of the present invention will be described clearly and completely below, and it should be apparent that the described embodiments are some, but not all, embodiments of the present invention. All other embodiments, which can be obtained by a person skilled in the art without any inventive step based on the embodiments of the present invention, are within the scope of the present invention.
Experimental procedures without specific conditions noted in the following examples, molecular cloning is generally performed according to conventional conditions such as Sambrook et al: the conditions described in the laboratory Manual (New York: Cold Spring Harbor laboratory Press, 1989), or according to the manufacturer's recommendations. Unless otherwise indicated, percentages and parts are by weight. The test materials in the present invention are commercially available reagents unless otherwise specified, and are commercially available.
Example 1: screening for ene reductases
The reaction formula is as follows:
reaction operation: to a 10 mL reaction flask, 5 mL of a phosphate buffer solution having a volume concentration of 0.2M and a pH of 7.0, 1 mg of NADP + and 50 mg of alkene reductase (commercially available), 5 mg of glucose dehydrogenase and 20 mg of glucose were added, and the temperature was adjusted to 27 ℃.5 mg of Compound I dissolved in 25. mu.L of dimethyl sulfoxide was put into a reaction flask, stirred vigorously, and reacted for 18 hours. After the reaction, 100. mu.L of the reaction solution was taken, 900. mu.L of methanol was added, and after centrifugation, separation by SFC detection (supercritical fluid chromatography). When the wavelength is 210 nm, the maximum ultraviolet absorption peak of the compound II is detected, the maximum absorption wavelength is 293.7 nm, and the peak-off time is 6.501 min, refer to FIG. 2. The reaction results are shown in table 1.
TABLE 1
As shown by the reaction results of tests A1-A5, the reaction effects of different alkene reductases on the substrate compound shown as the formula I are obviously different.
Example 2: specificity of ene reductases for substrates
The reaction formula is as follows:
reaction operation: the same reaction procedure as in example 1 was followed using different substrates, using the alkene reductases ERED-16323 or ERED-1663. The reaction results are shown in Table 2.
TABLE 2
As shown by the comparison between the tests B1-B4 and the comparative examples A1-A2, the ene reductase ERED-16323 or ERED-1663 has obvious difference in reaction effect on different R4 substituted substrates.
Example 3: amplification of the biocatalytic preparation of (R) -6-hydroxy chroman-3-carboxylic acid (compound of formula II)
To a 2L reaction flask, 1L of a phosphate buffer solution having a volume concentration of 0.2M and a pH of 7.0, 1g of NADP + and 10g of an ene reductase (ERED-16323, Genbank accession No. WP-014096091), 1g of a glucose dehydrogenase and 4 g of glucose were added, and the temperature was adjusted to 27 ℃. 1g of Compound I dissolved in 5 mL of dimethyl sulfoxide was charged into a reaction flask, vigorously stirred, and reacted for 18 hours. After the reaction is finished, the conversion rate is 35.5% and the e.e. > 99% by post-treatment and SFC detection.
In summary, the above embodiments are merely preferred embodiments of the present invention, and are not intended to limit the scope of the present invention, and any modifications, equivalents, improvements, etc. made within the spirit and principle of the present invention should be included in the scope of the present invention.
Claims (10)
1. A biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid is characterized by comprising the following steps:
in a liquid reaction system, taking a compound shown in a formula I as a substrate, and carrying out asymmetric reduction reaction under catalysis of alkene reductase in the presence of coenzyme to form a compound shown in a formula II;
step (b) of separating the compound of formula (II) from the reaction system after the reaction of step (a);
wherein the alkene reductase is selected from: 1) the alkene reductase ERED-16323 has a Genbank serial number of WP-014096091; or 2) ERED-1663 with Genbank accession number NC-015687.
2. The method of claim 1, wherein the concentration of the compound of formula I is from 0.1 to 500 g/L.
3. The method of claim 1, wherein the mass ratio of the alkene reductase to the compound of formula I is (0.01-20): 1.
4. the method of claim 1, wherein the coenzyme is selected from the group consisting of: a reducing coenzyme, an oxidizing coenzyme, or a combination thereof; the reducing coenzyme is selected from the group consisting of: NADH, NADPH, or a combination thereof; the oxidative coenzyme is selected from the group consisting of: NAD +, NADP +, or combinations thereof.
5. The method according to claim 1, wherein the mass ratio of the coenzyme to the compound of formula I is (0.0001-1): 1.
6. the method according to claim 1, wherein in the reaction system, an enzyme for coenzyme regeneration; the enzyme for coenzyme regeneration is selected from the group consisting of: glucose dehydrogenase, alcohol dehydrogenase, formate dehydrogenase, or a combination thereof.
7. The method of claim 1, wherein in the reaction system, a co-substrate is also present; the co-substrate is selected from: isopropanol, glucose, ammonium formate, or a combination thereof.
8. The method of claim 1, wherein in the step (a), the reaction temperature is 5 ℃ to 50 ℃, the reaction time is 0.1 to 120 hours, and the pH of the reaction system is 5.5 to 9.5.
9. A reaction system, characterized in that the reaction system comprises:
(1) an aqueous solvent;
(2) a substrate which is a compound of formula I;
(3) a coenzyme;
(4) an alkene reductase; the alkene reductase is selected from: 1) the Genbank serial number of the ene reductase ERED-16323 is WP-014096091; or 2) ERED-1663 with Genbank accession number NC-015687;
(5) a co-substrate.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202210865238.5A CN114921508B (en) | 2022-07-22 | 2022-07-22 | Biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202210865238.5A CN114921508B (en) | 2022-07-22 | 2022-07-22 | Biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid |
Publications (2)
Publication Number | Publication Date |
---|---|
CN114921508A true CN114921508A (en) | 2022-08-19 |
CN114921508B CN114921508B (en) | 2022-10-11 |
Family
ID=82815697
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN202210865238.5A Active CN114921508B (en) | 2022-07-22 | 2022-07-22 | Biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN114921508B (en) |
Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN101802207A (en) * | 2007-07-11 | 2010-08-11 | 帝斯曼知识产权资产管理有限公司 | The enantiomerism selective reduction |
US20170226485A1 (en) * | 2014-08-06 | 2017-08-10 | Johnson Matthey Public Limited Company | Catalyst and use thereof |
WO2022023450A1 (en) * | 2020-07-28 | 2022-02-03 | Jazz Pharmaceuticals Ireland Limited | Chiral synthesis of fused bicyclic raf inhibitors |
-
2022
- 2022-07-22 CN CN202210865238.5A patent/CN114921508B/en active Active
Patent Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN101802207A (en) * | 2007-07-11 | 2010-08-11 | 帝斯曼知识产权资产管理有限公司 | The enantiomerism selective reduction |
US20170226485A1 (en) * | 2014-08-06 | 2017-08-10 | Johnson Matthey Public Limited Company | Catalyst and use thereof |
WO2022023450A1 (en) * | 2020-07-28 | 2022-02-03 | Jazz Pharmaceuticals Ireland Limited | Chiral synthesis of fused bicyclic raf inhibitors |
Also Published As
Publication number | Publication date |
---|---|
CN114921508B (en) | 2022-10-11 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
CA1256815A (en) | Process for producing peroxidase | |
CN106497996B (en) | Enzymatic preparation method of chiral alcohol | |
CA2565675C (en) | Process for the preparation of 2-butanol | |
WO2009045507A2 (en) | Processes for preparing an intermediate of sitagliptin via enzymatic reduction | |
KR0165102B1 (en) | Preparation method of 2-hydroxy-4-phenyl butyric acid and its use as inhibitor of angiotensin transferase | |
US20190336887A1 (en) | Process for purifying nadph | |
US4749670A (en) | Selective regeneration of mediators in the presence of a catalyst and surfactant | |
CN114921508B (en) | Biocatalytic preparation method of (R) -6-hydroxy chroman-3-carboxylic acid | |
CN107586793B (en) | Method for preparing alcohol compounds having multiple chiral centers | |
CN112708641A (en) | Chemical-enzymatic synthesis method of tomoxetine | |
EP2837689B1 (en) | Optical resolution method for bicyclic compound using enzyme | |
CN112195198B (en) | Method for preparing D-pantoic acid | |
JP2006521101A (en) | Combined cofactor-dependent enzyme reaction system in aqueous media | |
Lin et al. | Enantioselective synthesis of (S)-phenylephrine by whole cells of recombinant Escherichia coli expressing the amino alcohol dehydrogenase gene from Rhodococcus erythropolis BCRC 10909 | |
Adlercreutz | Oxidation of trans-and cis-1, 2-cyclohexanediol by Gluconobacter oxydans: Preparation of (R)-and (S)-2-hydroxycyclohexanone | |
WO2008074506A1 (en) | Optical resolution of a mixture of enantiomers of butynol or butenol | |
CN105985990B (en) | Production method of phenylephrine intermediate | |
CN111808893B (en) | Novel biological preparation method of amino alcohol drug intermediate | |
JP7209699B2 (en) | Method for producing (R)-3-quinuclidinol by highly efficient enzymatic method | |
CN109486866A (en) | The method that biocatalysis prepares (S) -4- decyl alcohol | |
JP2005533497A (en) | Coupled enzyme reaction system based on two-phase alcohol dehydrogenase | |
CN112779300B (en) | Method for preparing (S) -3-butyn-2-amine by biocatalysis | |
CN105420307A (en) | Method for preparing (S)-N-t-butyloxycarboryl-3-hydroxypiperidine | |
CN120026068A (en) | Preparation method of (S) -1- (3-bromopyridine-2-yl) ethanol | |
WO2009153325A1 (en) | Optical resolution of a mixture of enantiomers of butynol or butenol |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination | ||
GR01 | Patent grant | ||
GR01 | Patent grant |