CN114533102B - A method to investigate systemic metabolic abnormalities at the individual level using whole-body SUV images - Google Patents

A method to investigate systemic metabolic abnormalities at the individual level using whole-body SUV images Download PDF

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CN114533102B
CN114533102B CN202210108838.7A CN202210108838A CN114533102B CN 114533102 B CN114533102 B CN 114533102B CN 202210108838 A CN202210108838 A CN 202210108838A CN 114533102 B CN114533102 B CN 114533102B
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王梅云
孙涛
吴亚平
王振国
白岩
魏巍
申雨
李晓晨
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Abstract

本发明公开一种使用全身SUV图像调查个体水平的全身代谢异常的方法,包括:采集不同受试者不同采样区域的18F‑FDG PET/CT扫描数据,得到不同受试者的具有标准摄取值SUV的图像,通过该图像进行采样区域的选择;所述受试者包括健康对照组,肺癌组,Covid‑19出院后30天的受试者,原因不明的胃肠道出血的受试者;构建不同受试者的个体连接网络,并通过不同受试者的个体连接网络得出不同受试者的每个采样区域代谢异常程度;通过不同受试者的每个采样区域代谢异常程度进行对照组同质性分析、肺癌组异质性分析、小组与个人层面的网络分析及个人网络与单器官分析。本发明的方法可以潜在地识别系统性代谢异常。

Figure 202210108838

The present invention discloses a method for investigating individual-level systemic metabolic abnormalities using whole-body SUV images. , through which sampling areas were selected; the subjects included healthy controls, lung cancer groups, subjects 30 days after Covid‑19 discharge, and subjects with unexplained gastrointestinal bleeding; construct The individual connection network of different subjects, and the degree of metabolic abnormality in each sampling area of different subjects is obtained through the individual connection network of different subjects; the control group is determined by the degree of metabolic abnormality in each sampling area of different subjects Homogeneity analysis, lung cancer group heterogeneity analysis, group- and individual-level network analysis, and individual network and single-organ analysis. The methods of the present invention can potentially identify systemic metabolic abnormalities.

Figure 202210108838

Description

一种使用全身SUV图像调查个体水平的全身代谢异常的方法A method to investigate whole-body metabolic abnormalities at the individual level using whole-body SUV images

技术领域technical field

本发明属于医学图像处理技术领域,尤其涉及一种使用全身SUV图像调查个体水平的全身代谢异常的方法。The invention belongs to the technical field of medical image processing, and in particular relates to a method for investigating an individual-level systemic metabolic abnormality using a whole-body SUV image.

背景技术Background technique

人体代谢稳态依赖于全身水平的复杂神经元,血管和体液机制。器官之间的同时非线性相互作用形成不同的生理网络。许多系统性疾病是由于器官间生理相互作用的干扰或与之相关。尽管存在用于在器官水平上研究这种干扰的既定方法,但是进一步开发足以在系统水平上量化的通用方法存在挑战。Human metabolic homeostasis relies on complex neuronal, vascular and humoral mechanisms at the systemic level. Simultaneous nonlinear interactions between organs form distinct physiological networks. Many systemic diseases are due to or related to the interference of physiological interactions between organs. Although there are established methods for studying this interference at the organ level, further development of a general method sufficient to quantify at the system level presents challenges.

迄今为止,大多数关于这些主题的研究都使用非成像工具。Thiele等人开发了一种代谢网络重建方法,该方法使用来自文献和组学数据的器官特异性信息。包括20个器官,6个性器官,6种血细胞类型和13种生物流体隔室的数据来源。Barajas-Martínez等人介绍了基于人体测量,空腹血液检查和其他生命体征的生理网络。他们得出结论,网络的具体结构特性将在整个人类寿命期间发生变化,并可提供健康状况指标。Cui等人重建了组织和细胞类型中的全球哺乳动物代谢网络,并尝试将器官与器官间代谢物转运联系起来。Bashan等人和Bartsch等人开发了一个框架来探测不同系统之间的相互作用,并确定一个展示网络拓扑和功能之间相互作用的生理网络。但上述方法均不能在系统水平上量化。To date, most studies on these topics have used non-imaging tools. Thiele et al. developed a metabolic network reconstruction method using organ-specific information from literature and omics data. Includes data sources for 20 organs, 6 sex organs, 6 blood cell types, and 13 biofluidic compartments. Barajas-Martínez et al. introduced physiological networks based on anthropometric measurements, fasting blood tests and other vital signs. They concluded that specific structural properties of the network will change throughout the human lifespan and provide indicators of health status. Cui et al. reconstructed global mammalian metabolic networks in tissues and cell types and attempted to link organ-to-organ metabolite transport. Bashan et al. and Bartsch et al. developed a framework to probe interactions between different systems and identify a physiological network that exhibits interactions between network topology and function. But none of the above methods can be quantified at the system level.

发明内容SUMMARY OF THE INVENTION

本发明针对现有代谢异常分析方法存在的不能在系统水平上量化的问题,提出一种使用全身SUV图像调查个体水平的全身代谢异常的方法。Aiming at the problem that the existing metabolic abnormality analysis methods cannot be quantified at the system level, the present invention proposes a method for investigating the systemic metabolic abnormality at the individual level by using the whole body SUV image.

为了实现上述目的,本发明采用以下技术方案:In order to achieve the above object, the present invention adopts the following technical solutions:

一种使用全身SUV图像调查个体水平的全身代谢异常的方法,包括:A method of investigating whole-body metabolic abnormalities at the individual level using whole-body SUV images, including:

步骤1,数据采集和处理:采集不同受试者不同采样区域的18F-FDG PET/CT扫描数据,得到不同受试者的具有标准摄取值SUV的图像,通过该图像进行采样区域的选择;所述受试者包括由没有任何疾病记录的受试者组成的健康对照组,被诊断为肺癌、病变部位不同的受试者组成的肺癌组,Covid-19出院后30天的受试者,原因不明的胃肠道出血的受试者;Step 1, data collection and processing: collect 18F-FDG PET/CT scan data of different subjects in different sampling areas, obtain images of different subjects with standard uptake value SUV, and select sampling areas through the images; The subjects included a healthy control group consisting of subjects without any disease records, a lung cancer group consisting of subjects diagnosed with lung cancer, with different lesion sites, subjects 30 days after discharge from Covid-19, reasons Subjects with unidentified gastrointestinal bleeding;

步骤2,构建不同受试者的个体连接网络,并通过不同受试者的个体连接网络得出不同受试者的每个采样区域代谢异常程度;Step 2, construct the individual connection network of different subjects, and obtain the metabolic abnormality degree of each sampling area of different subjects through the individual connection network of different subjects;

步骤3,通过不同受试者的每个采样区域代谢异常程度进行对照组同质性分析、肺癌组异质性分析、小组与个人层面的网络分析及个人网络与单器官分析。In step 3, the homogeneity analysis of the control group, the heterogeneity analysis of the lung cancer group, the network analysis at the group and individual levels, and the individual network and single-organ analysis were carried out through the metabolic abnormality degree of each sampling area of different subjects.

进一步地,所述步骤1包括:Further, the step 1 includes:

步骤1.1:首先进行CT扫描以进行衰减校正,然后进行18F-FDG PET/CT采集;使用3D有序子集期望最大化算法将扫描数据重建为体素大小固定的矩阵;使用基于CT的衰减校正图进行衰减和散射校正;然后通过归一化注射剂量和重量将重建的活动图像转换为具有标准摄取值SUV的图像;Step 1.1: CT scan is performed first for attenuation correction, followed by 18F-FDG PET/CT acquisition; scan data is reconstructed into a voxel-sized fixed matrix using a 3D ordered subset expectation maximization algorithm; CT-based attenuation correction is used Attenuation and scatter correction were performed on the map; the reconstructed active images were then converted to images with standard uptake values SUV by normalizing injected dose and weight;

步骤1.2:对于每次扫描,在SUV图像上描绘所有感兴趣器官的感兴趣采样区域;所述采样区域包括全脑,血液,左心室,肺,肝,胰腺,脾,左/右肾,肌肉和脊柱;使用统计参数映射进行脑细胞分裂,将重建图像中包含大脑的平面提取为新体积,并在蒙特利尔神经病学研究所空间中进行空间归一化;通过高斯滤波器对归一化图像进行平滑处理,然后分成由AAL2图谱定义的区域,选择其中的脑干,全小脑,脑脊液,全白质,尾状核,壳核和额叶皮层作为新的采样区域,与描绘的器官一起,每次扫描分析总共18个采样区域。Step 1.2: For each scan, delineate the sampling area of interest for all organs of interest on the SUV image; the sampling area includes whole brain, blood, left ventricle, lung, liver, pancreas, spleen, left/right kidney, muscle and spine; brain cell division using statistical parametric mapping, extraction of planes containing brains in reconstructed images as new volumes and spatial normalization in Montreal Neurological Institute space; normalized images were subjected to Gaussian filters Smoothed and then divided into regions defined by the AAL2 atlas, of which brainstem, whole cerebellum, cerebrospinal fluid, whole white matter, caudate nucleus, putamen and frontal cortex were selected as new sampling areas, along with the delineated organs, each time A total of 18 sampling areas were scanned for analysis.

进一步地,所述步骤2包括:Further, the step 2 includes:

步骤2.1,从健康对照组构建参考代谢网络refNET,该参考代谢网络是通过计算每个区域对的SUV之间的Pearson相关系数获得的,采用协方差网络结构;Step 2.1, construct a reference metabolic network refNET from the healthy control group, which is obtained by calculating the Pearson correlation coefficient between the SUVs of each region pair, using a covariance network structure;

步骤2.2:在健康对照组中添加一名患者,形成一个新组,以构建一个新的结构协方差网络,该网络被标记为扰动网络ptbNET;Step 2.2: Add a patient to the healthy control group to form a new group to construct a new structural covariance network, which is labeled as the perturbation network ptbNET;

步骤2.3,将扰动网络ptbNET和参考网络refNET之间的差异计算为剩余网络resNET;设置阈值0.3以消除弱相关性;获得了剩余网络resNET的Z分数图:In step 2.3, the difference between the perturbed network ptbNET and the reference network refNET is calculated as the residual network resNET; a threshold of 0.3 is set to eliminate weak correlations; the Z-score map of the residual network resNET is obtained:

Figure BDA0003494343350000021
Figure BDA0003494343350000021

其中N是新组中的主题总数,剩余网络本质上代表连通性的异常水平,每个网络由连接18个区域的153个边缘组成,每个边缘表现出不同程度的代谢变化;为了量化异常程度,定义每个区域异常的强度STR:where N is the total number of subjects in the new group, the remaining networks essentially represent abnormal levels of connectivity, and each network consists of 153 edges connecting 18 regions, each edge exhibiting varying degrees of metabolic changes; to quantify the degree of abnormality , which defines the intensity STR of each regional anomaly:

Figure BDA0003494343350000031
Figure BDA0003494343350000031

其中m是区域索引号,

Figure BDA0003494343350000032
是集合,
Figure BDA0003494343350000033
M=18是区域数,ZCCmi表示区域m与其相邻区域i之间的Z分数图的相关系数,相邻节点的总数等于m-1。where m is the region index number,
Figure BDA0003494343350000032
is the set,
Figure BDA0003494343350000033
M=18 is the number of regions, ZCC mi represents the correlation coefficient of the Z-score graph between region m and its adjacent region i, and the total number of adjacent nodes is equal to m-1.

进一步地,所述步骤3中,按照如下方式进行对照组同质性分析:Further, in the step 3, the homogeneity analysis of the control group is carried out as follows:

对每个健康对照组的受试者进行单独的网络分析,通过平均任何一对网络之间Z分数的Pearson相关系数来测量组内的相似性,然后进行重采样来测试主题选择的可重复性。Individual network analyses were performed on subjects in each healthy control group to measure within-group similarity by averaging the Pearson correlation coefficient of Z-scores between any pair of networks, followed by resampling to test reproducibility of subject selection .

进一步地,所述步骤3中,按照如下方式进行肺癌组异质性分析:Further, in the step 3, the lung cancer group heterogeneity analysis is performed as follows:

将每个肺癌患者的个人网络的强度与参考网络中的强度进行比较,通过测量所有153个边缘上成对Z得分之间的受试者间Pearson相关系数的平均值,计算出肺癌患者网络之间的相似性。The strength of each lung cancer patient's personal network was compared to the strength in the reference network, and the difference between the lung cancer patient networks was calculated by measuring the mean of the between-subject Pearson correlation coefficients between paired Z-scores on all 153 edges. similarity between.

进一步地,所述步骤3中,按照如下方式进行小组与个人层面的网络分析:Further, in the step 3, network analysis at the group and individual levels is carried out as follows:

分别为患者组和健康对照组构建组级代谢网络,通过计算两组中所有受试者的脑区域对的Pearson相关性来构建两个组级代谢网络,两个组级代谢网络之间的归一化差异被视为组级差异网络Diffgroup,iGroup-level metabolic networks were constructed for the patient group and healthy control group, respectively, and the normalization between the two group-level metabolic networks was constructed by calculating the Pearson correlations of pairs of brain regions of all subjects in the two groups. The normalized difference is treated as a group-level difference network Diff group, i :

Figure BDA0003494343350000034
Figure BDA0003494343350000034

其中i表示边,patNET表示患者组的组级代谢网络,refNET表示健康对照组的组级代谢网络;where i represents the edge, patNET represents the group-level metabolic network of the patient group, and refNET represents the group-level metabolic network of the healthy control group;

通过计算所有患者网络中每个边缘的Z得分的平均值来构建平均残差网络Diffindividual,iConstruct the mean residual network Diff individual,i by computing the mean of the Z-scores for each edge in all patient networks:

Figure BDA0003494343350000035
Figure BDA0003494343350000035

其中j是患者索引号,Np是患者的总数;where j is the patient index number and Np is the total number of patients;

计算平均残差网络Diffindividual,i和组级差异网络Diffgroup,i之间的Pearson相关系数。Calculate the Pearson correlation coefficient between the mean residual network Diff individual,i and the group-level difference network Diff group,i .

进一步地,所述步骤3中,按照如下方式进行个人网络与单器官分析:Further, in the step 3, personal network and single organ analysis are carried out as follows:

为一名Covid-19出院后30天的受试者和一名原因不明的胃肠道出血的受试者分别构建单独的连接网络,根据器官的网络强度量化SUV的变化。Separate connectivity networks were constructed for a subject 30 days post-discharge with Covid-19 and a subject with unexplained gastrointestinal bleeding to quantify changes in SUV based on organ network strength.

与现有技术相比,本发明具有的有益效果:Compared with the prior art, the present invention has the following beneficial effects:

本发明可以使用受试者的全身PET/CT SUV图像和健康对照组构建个体代谢异常网络。本发明提出的方法可调查个体水平的全身代谢异常,表征了个体水平的葡萄糖代谢的分子连接性,这是目前的分析方法所不能的。本发明的方法可以潜在地识别系统性代谢异常,由于肺癌组之间的巨大异质性,这不能通过传统的群体水平方法得出。此外本发明可以从系统的角度研究大脑和其他器官如何在健康和疾病状况下相互作用。The present invention can construct an individual metabolic abnormality network using the whole body PET/CT SUV image of the subject and the healthy control group. The method proposed by the present invention can investigate the systemic metabolic abnormalities at the individual level and characterize the molecular connectivity of glucose metabolism at the individual level, which is not possible with current analytical methods. The methods of the present invention can potentially identify systemic metabolic abnormalities, which cannot be derived by traditional population-level approaches due to the large heterogeneity among lung cancer groups. In addition, the present invention can study how the brain and other organs interact in health and disease conditions from a systems perspective.

附图说明Description of drawings

图1为本发明实施例一种使用全身SUV图像调查个体水平的全身代谢异常的方法的基本流程图;1 is a basic flow chart of a method for investigating an individual-level systemic metabolic abnormality using a whole-body SUV image according to an embodiment of the present invention;

图2为本发明实施例2D采样的目标区域;FIG. 2 is a target area of 2D sampling according to an embodiment of the present invention;

图3为本发明实施例获得的个体代谢网络的整体框架图;3 is an overall framework diagram of an individual metabolic network obtained in an embodiment of the present invention;

图4为本发明实施例健康对照组和肺癌组肺部个体代谢网络连接强度的箱形图及两组肺中相应的SUV值;4 is a box plot of the connection strength of individual metabolic networks in the lungs of the healthy control group and the lung cancer group according to the embodiment of the present invention and the corresponding SUV values in the two groups of lungs;

图5为本发明实施例一名Covid-19出院后30天的受试者和一名原因不明的胃肠道出血的受试者的个体代谢连接性;Figure 5 shows the individual metabolic connectivity of a subject 30 days after discharge from Covid-19 and a subject with unexplained gastrointestinal bleeding in the embodiment of the present invention;

图6为本发明实施例器官|ΔSUV|与图4中网络计算的网络强度之间的相关图。FIG. 6 is a correlation diagram between the organ |ΔSUV| in the embodiment of the present invention and the network strength calculated by the network in FIG. 4 .

具体实施方式Detailed ways

下面结合附图和具体的实施例对本发明做进一步的解释说明:The present invention will be further explained below in conjunction with the accompanying drawings and specific embodiments:

在本发明中,我们提出了一个框架,可以使用受试者的全身PET/CT SUV图像和健康对照组构建个体代谢异常网络。首先演示实施细节,然后进行验证。最后,演示了示例应用,并将其性能与传统的组级连通性和单器官摄取分析进行了比较。In the present invention, we propose a framework to construct individual metabolic abnormality networks using whole-body PET/CT SUV images of subjects and healthy controls. The implementation details are demonstrated first, followed by verification. Finally, example applications are demonstrated and their performance compared to traditional group-level connectivity and single-organ uptake analysis.

具体地,如图1所示,一种使用全身SUV图像调查个体水平的全身代谢异常的方法,包括:Specifically, as shown in Figure 1, a method for investigating whole-body metabolic abnormalities at the individual level using whole-body SUV images includes:

步骤S101,数据采集和处理:采集不同受试者不同采样区域的18F-FDG PET/CT扫描数据,得到不同受试者的具有标准摄取值SUV的图像,通过该图像进行采样区域的选择;所述受试者包括由没有任何疾病记录的受试者组成的健康对照组,被诊断为肺癌、病变部位不同的受试者组成的肺癌组,Covid-19出院后30天的受试者,原因不明的胃肠道出血的受试者;Step S101, data collection and processing: collect 18F-FDG PET/CT scan data of different subjects in different sampling areas, obtain images of different subjects with standard uptake value SUV, and select the sampling areas through the images; The subjects included a healthy control group consisting of subjects without any disease records, a lung cancer group consisting of subjects diagnosed with lung cancer, with different lesion sites, subjects 30 days after discharge from Covid-19, reasons Subjects with unidentified gastrointestinal bleeding;

步骤S102,构建不同受试者的个体连接网络,并通过不同受试者的个体连接网络得出不同受试者的每个采样区域代谢异常程度;Step S102, constructing individual connection networks of different subjects, and obtaining the metabolic abnormality degree of each sampling area of different subjects through the individual connection networks of different subjects;

步骤S103,通过不同受试者的每个采样区域代谢异常程度进行对照组同质性分析、肺癌组异质性分析、小组与个人层面的网络分析及个人网络与单器官分析。In step S103, the homogeneity analysis of the control group, the heterogeneity analysis of the lung cancer group, the network analysis at the group and individual level, and the individual network and single organ analysis are performed according to the metabolic abnormality degree of each sampling area of different subjects.

具体地,本实施例总共包括36次18F-FDG PET/CT扫描。受试者中,二十四名为年轻健康的受试者,没有任何疾病记录;十例被诊断为肺癌,病变部位不同;一个是在Covid-19出院后30天进行的;一个是原因不明的胃肠道出血。这些研究的人口统计数据列于表1中。Specifically, this embodiment includes a total of 36 18F-FDG PET/CT scans. Of the subjects, twenty-four were young, healthy subjects with no documented disease; ten were diagnosed with lung cancer with different lesions; one was performed 30 days after discharge from Covid-19; one was unexplained gastrointestinal bleeding. The demographics of these studies are listed in Table 1.

表1受试者的人口统计Table 1 Demographics of Subjects

Figure BDA0003494343350000051
Figure BDA0003494343350000051

步骤S101的数据采集和处理过程中,所有扫描均在中国河南省人民医院的uExplorer PET/CT扫描仪上获得。这些研究得到了当地伦理委员会的批准。扫描前获得每个受试者的书面同意。扫描过程和数据格式如下。首先进行CT扫描以进行衰减校正。然后开始60分钟列表模式PET采集,其中推注从下肢静脉注射到静脉的18F-FDG(注射剂量参见表1)。为了获得SUV图像,使用工作站上的3D有序子集期望最大化(OSEM)算法将50-60分钟内的扫描数据重建为体素大小为3.125×3.125×2.866mm3的192×192×80矩阵。重建应用了3次迭代,28个子集和2mm高斯后平滑。使用基于CT的衰减校正图进行衰减和散射校正。然后通过归一化注射剂量和重量将重建的活动图像(以Bq/cc为单位)转换为具有标准摄取值(SUV)的图像。During the data acquisition and processing of step S101, all scans were acquired on a uExplorer PET/CT scanner at the People's Hospital of Henan Province, China. These studies were approved by the local ethics committee. Written consent was obtained from each subject prior to scanning. The scanning process and data format are as follows. A CT scan was first performed for attenuation correction. A 60-minute list-mode PET acquisition was then initiated with a bolus of 18F-FDG injected intravenously from the lower extremity (see Table 1 for the dose of injection). To obtain the SUV images, the scan data over 50-60 minutes was reconstructed into a 192×192×80 matrix of voxel size 3.125×3.125× 2.866mm3 using the 3D ordered subset expectation maximization (OSEM) algorithm on the workstation . Reconstruction applied 3 iterations, 28 subsets and 2mm Gaussian post-smoothing. Attenuation and scatter correction were performed using a CT-based attenuation correction map. The reconstructed active images (in Bq/cc) were then converted to images with standard uptake values (SUV) by normalizing injected dose and weight.

对于每次扫描,在SUV图像上手动描绘所有感兴趣器官的感兴趣区域(ROI)。采样的目标区域如图2所示,共11个采样区域,包括全脑,血液,左心室,肺,肝,胰腺,脾,左/右肾,肌肉和脊柱,其中大脑指的是全脑,而肺指的是病变所在的左肺或右肺,排除病变本身。使用统计参数映射(SPM12)进一步进行脑细胞分裂。将重建图像中包含大脑的平面提取为新体积,并在蒙特利尔神经病学研究所(MNI)空间中对FDG-PET模板进行空间归一化。用8mmFWHM的高斯滤波器对归一化图像进行平滑处理,然后分成由AAL2图谱定义的94个区域。根据上下文中定义的AAL2图谱,从大脑中进一步提取子区域。本实施例中,只选择脑干,全小脑(CER),脑脊液(CSF),全白质(WM),尾状核,壳核和额叶皮层(SF)进行后续分析。与描绘的器官一起,每次扫描分析总共18个采样区域。网络分析使用Brain Connectivity Toolbox进行。所有统计分析均使用Matlab R2018b中的统计和机器学习工具箱进行。Regions of interest (ROI) for all organs of interest were manually delineated on the SUV images for each scan. The target area for sampling is shown in Figure 2, with a total of 11 sampling areas, including whole brain, blood, left ventricle, lung, liver, pancreas, spleen, left/right kidney, muscle and spine, where brain refers to the whole brain, The lung refers to the left or right lung where the lesion is located, excluding the lesion itself. Brain cell division was further performed using statistical parametric mapping (SPM12). The plane containing the brain in the reconstructed image was extracted as a new volume and the FDG-PET template was spatially normalized in the Montreal Neurological Institute (MNI) space. Normalized images were smoothed with a Gaussian filter of 8 mm FWHM and then divided into 94 regions defined by the AAL2 atlas. Sub-regions were further extracted from the brain according to the AAL2 atlas defined in the context. In this example, only the brainstem, whole cerebellum (CER), cerebrospinal fluid (CSF), whole white matter (WM), caudate nucleus, putamen and frontal cortex (SF) were selected for subsequent analysis. Along with the organs depicted, a total of 18 sampling areas were analyzed per scan. Network analysis was performed using the Brain Connectivity Toolbox. All statistical analyses were performed using the Statistics and Machine Learning Toolbox in Matlab R2018b.

步骤S102中,为了构建个体连接网络,我们采用了用于脑解剖MRI的方法。整体框架如图3所示。基本思路是通过对该个体样本于整体控制样本集的干扰进行分析,而得到其异常信息。首先,从健康对照组(24名健康受试者)构建参考代谢网络refNET,该参考代谢网络是通过计算每个区域对的SUV之间的部分Pearson相关系数(年龄,性别为协变量)获得的,采用协方差网络结构。该网络的节点即是目标区域,连接边缘即结点间的相关系数,相关系数越大连接越强。通常来说,构建的参考网络具有所有控制样本的共同特征。然后,我们在健康对照组中添加一名患者,从而形成一个由25名受试者组成的新组,以构建一个新的结构协方差网络,该网络被标记为扰动网络ptbNET。接下来,将扰动网络ptbNET和参考网络refNET之间的差异计算为剩余网络resNET。设置阈值0.3以消除可能来自噪声的弱相关性。获得了resNET的Z分数图:In step S102, in order to construct an individual connection network, we employ a method for brain anatomy MRI. The overall framework is shown in Figure 3. The basic idea is to obtain the abnormal information by analyzing the interference of the individual sample with the overall control sample set. First, a reference metabolic network, refNET, was constructed from a healthy control group (24 healthy subjects), which was obtained by calculating the partial Pearson correlation coefficient (age, gender as covariates) between the SUVs for each region pair , using a covariance network structure. The node of the network is the target area, and the connection edge is the correlation coefficient between the nodes. The larger the correlation coefficient, the stronger the connection. Generally speaking, the constructed reference network has common characteristics of all control samples. We then added a patient to the healthy control group, thus forming a new group of 25 subjects, to construct a new structural covariance network, labeled the perturbation network ptbNET. Next, the difference between the perturbed network ptbNET and the reference network refNET is calculated as the residual network resNET. A threshold of 0.3 was set to remove weak correlations that might come from noise. Obtained the Z-score graph for resNET:

Figure BDA0003494343350000061
Figure BDA0003494343350000061

其中N是新组中的主题总数、即样本总数。剩余网络本质上代表连通性的异常水平,每个网络由连接18个区域的153个边缘组成。每个边缘表现出不同程度的代谢变化,并且导致与对照组中的正常值的偏差。在正常情况下,身体网络结构稳定且相关连接。当代谢指数由于疾病而在受试者中改变时,网络链接相应地改变。为了量化异常程度,我们定义了每个区域异常的强度STR:where N is the total number of subjects in the new group, i.e. the total number of samples. The residual networks essentially represent abnormal levels of connectivity, each consisting of 153 edges connecting 18 regions. Each edge exhibited varying degrees of metabolic changes and resulted in deviations from normal values in the control group. Under normal conditions, the body network structure is stable and connected. When metabolic indices changed in subjects due to disease, network links changed accordingly. To quantify the degree of anomaly, we define the intensity STR of anomalies in each region:

Figure BDA0003494343350000071
Figure BDA0003494343350000071

其中m是区域索引号,

Figure BDA0003494343350000072
是集合,
Figure BDA0003494343350000073
M=18是区域数。ZCCmi表示区域m与其相邻区域i之间的Z分数图的相关系数。相邻节点的总数等于m-1。where m is the region index number,
Figure BDA0003494343350000072
is the set,
Figure BDA0003494343350000073
M=18 is the number of regions. ZCC mi represents the correlation coefficient of the Z-score map between region m and its neighboring region i. The total number of adjacent nodes is equal to m-1.

步骤S103的数据和统计分析中,我们首先通过测量组内相似性来调查健康对照组的总体一致性。其次,证实了肺癌患者个体网络的异质性。第三,将个人层面网络的衡量标准与小组层面网络的衡量标准进行比较。最后,通过测量SUV与网络强度之间的相关性来测试单个网络揭示单个器官异常的能力。下面列出了如何实施这些调查的细节。In the data and statistical analysis of step S103, we first investigate the overall consistency of the healthy control group by measuring the within-group similarity. Second, the heterogeneity of the individual network of lung cancer patients was confirmed. Third, compare measures of networking at the individual level with measures of networking at the group level. Finally, the ability of individual networks to reveal abnormalities in individual organs was tested by measuring the correlation between SUV and network strength. Details on how to conduct these investigations are listed below.

(1)对照组同质性分析(1) Homogeneity analysis of the control group

对每个健康对照组的受试者进行单独的网络分析。通过平均任何一对网络之间Z分数的相关系数来测量组内的相似性。然后我们进行重采样程序来测试主题选择的可重复性。这个想法是来自同一人群的两个随机群体不应该彼此不同。总共有30个正常样本,我们从这些样本中随机抽取了24个样本(30个中的4/5)作为对照组。取样过程重复20次。我们使用所提出的方法从每个随机抽样组构建了refNET。通过平均任何一对网络之间Z分数的相关系数来量化这些refNET之间的可重复性。我们进一步对对照组样本量的敏感性进行了重采样测试。这个想法是调查构建对照组所需的最小正常受试者数量。我们从上述30名正常受试者中随机选择10,15,18,20和24个样品(每个20次)作为对照组。然后使用所提出的方法为肺癌组中的每位患者计算新的resNET,并与上下文中的resNET进行比较。A separate network analysis was performed on subjects in each healthy control group. Within-group similarity was measured by averaging the correlation coefficient of Z-scores between any pair of networks. We then perform a resampling procedure to test the repeatability of topic selection. The idea is that two random groups from the same population should not be different from each other. There were a total of 30 normal samples from which we randomly selected 24 samples (4/5 of 30) as the control group. The sampling process was repeated 20 times. We constructed refNETs from each randomly sampled group using the proposed method. The reproducibility between these refNETs was quantified by averaging the correlation coefficient of Z-scores between any pair of networks. We further performed a resampling test for sensitivity to the sample size of the control group. The idea is to investigate the minimum normal number of subjects needed to construct a control group. We randomly selected 10, 15, 18, 20 and 24 samples (20 times each) from the above 30 normal subjects as the control group. New resNETs were then calculated for each patient in the lung cancer group using the proposed method and compared with resNETs in context.

(2)肺癌组异质性分析(2) Heterogeneity analysis of lung cancer group

将每个患者的个人网络的强度与参考网络中的强度进行比较。通过测量所有153个边缘上成对Z得分之间的受试者间Pearson相关系数的平均值,计算出患者网络之间的相似性。The strength of each patient's personal network was compared to the strength in the reference network. Similarities between patient networks were calculated by measuring the mean of the between-subject Pearson correlation coefficients between paired Z-scores on all 153 edges.

(3)小组与个人层面的网络分析(3) Network analysis at group and individual levels

我们分别为患者和健康对照组构建了组级代谢网络。通过计算两组中所有受试者的脑区域对的Pearson相关性来构建两个组级代谢网络(均为结构协方差网络)。两个组级代谢网络之间的归一化差异被视为组级差异网络Diffgroup,iWe constructed group-level metabolic networks for patients and healthy controls, respectively. Two group-level metabolic networks (both structural covariance networks) were constructed by calculating Pearson correlations for pairs of brain regions for all subjects in the two groups. The normalized differences between the two group-level metabolic networks were regarded as the group-level difference network Diff group, i .

Figure BDA0003494343350000081
Figure BDA0003494343350000081

其中i表示边,patNET表示患者组的组级代谢网络,refNET表示健康对照组的组级代谢网络。where i denotes edges, patNET denotes the group-level metabolic network of the patient group, and refNET denotes the group-level metabolic network of the healthy control group.

我们还通过计算所有患者网络中每个边缘的Z得分平均值来构建平均残差网络Diffindividual,iWe also construct the mean residual network Diff individual, i by computing the mean of the Z-scores for each edge in the network of all patients:

Figure BDA0003494343350000082
Figure BDA0003494343350000082

其中j是患者索引号,Np是患者的总数。where j is the patient index number and Np is the total number of patients.

计算平均残差网络Diffindividual,i和组水平差异网络Diffgroup,i之间的Pearson相关系数。Calculate the Pearson correlation coefficient between the mean residual network Diff individual,i and the group-level difference network Diff group,i .

(4)个人网络与单器官分析(4) Personal network and single organ analysis

我们为一名从Covid-19出院的受试者和一名消化道出血患者构建了一个单独的连接网络。根据器官的网络强度量化SUV的变化,以揭示所提出的方法揭示器官水平异常的能力。We constructed a separate network of connections for a subject discharged from Covid-19 and a patient with gastrointestinal bleeding. Changes in SUV were quantified according to the network strength of the organ to reveal the ability of the proposed method to reveal abnormalities at the organ level.

具体地,分析结果如下:Specifically, the analysis results are as follows:

(1)对照组同质性分析(1) Homogeneity analysis of the control group

通过平均任何一对网络之间Z分数的相关系数来测量组内的相似性。相似系数为0.921±0.133,表明对照组之间的受试者间变异性较低。进行重采样过程,通过平均任何一对网络之间Z分数的相关系数(0.872±0.152)来量化这些refNET之间的可重复性。这表明该方法对控制对象的选择具有鲁棒性。我们进一步对对照组样本量的敏感性进行了重采样测试。对于样本量10,15,18,20,22和24,相对于样本量30的总体平均相似性分别为0.58±0.18,0.70±0.157,0.79±0.142,0.89±0.126,0.92±0.124和0.97±0.102。这表明随着受试者数量的增加,平均相似性增加,而相应的方差减少。对照组中的样品越多,所提出的方法越稳定。本实施例中使用的24名健康受试者相关数据已足以构建对照组。Within-group similarity was measured by averaging the correlation coefficient of Z-scores between any pair of networks. The similarity coefficient was 0.921 ± 0.133, indicating low inter-subject variability among the control group. A resampling process was performed to quantify the reproducibility between these refNETs by averaging the correlation coefficient (0.872 ± 0.152) of Z-scores between any pair of networks. This shows that the method is robust to the selection of control objects. We further performed a resampling test for sensitivity to the sample size of the control group. For sample sizes 10, 15, 18, 20, 22, and 24, the overall mean similarity relative to sample size 30 was 0.58±0.18, 0.70±0.157, 0.79±0.142, 0.89±0.126, 0.92±0.124, and 0.97±0.102, respectively . This shows that as the number of subjects increases, the average similarity increases, while the corresponding variance decreases. The more samples in the control group, the more stable the proposed method. The data of 24 healthy subjects used in this example are sufficient to construct a control group.

(2)肺癌组异质性分析(2) Heterogeneity analysis of lung cancer group

每个患者个体网络的强度与参考网络中的强度显著不同(P<0.01,Bonferroni校正了153个边缘)。然而,患者网络之间的相似性较低,所有153个边缘的成对Z得分之间的平均受试者间Pearson相关系数为0.196±0.182。尽管个体患者的器官范围异质性显著,但构成肺的连接比其他连接异常得多(图4,其中A为控制组(即健康对照组)和疾病组(即肺癌组)肺部个体网络连接强度的箱形图。B为两组肺中相应的SUV值(50-60分钟);来自单个网络的连接强度似乎更能够将控制组和疾病组分开)。结构偏差的总体负担或每位患者边缘明显改变的数量反映了异常的严重程度。The strength of each patient's individual network was significantly different from that in the reference network (P < 0.01, Bonferroni corrected for 153 edges). However, the similarity between patient networks was low, with an average between-subject Pearson correlation coefficient between paired Z-scores for all 153 edges of 0.196 ± 0.182. Despite significant organ-wide heterogeneity in individual patients, the connections that make up the lung are much more abnormal than others (Fig. 4, where A is the individual network connections in the lungs of the control (i.e., healthy) and diseased (i.e., lung cancer) groups) Boxplots of intensities. B are the corresponding SUV values in the two groups of lungs (50-60 min; connection intensities from a single network appear to be more able to separate control and disease groups). The overall burden of structural deviation, or the number of markedly altered margins per patient, reflects the severity of the abnormality.

(3)个人与团体层面的网络分析(3) Network analysis at the individual and group levels

所提出的方法得到的平均残差网络Diff_individual与组级差异网络Diff_group之间的Pearson相关系数为0.78。这表明每个受试者共同导致小组葡萄糖代谢水平差异,尽管肺癌组异质性证明受试者之间存在高度异质性。The Pearson correlation coefficient between the average residual network Diff_individual and the group-level difference network Diff_group obtained by the proposed method is 0.78. This suggests that each subject collectively contributes to group differences in glucose metabolism levels, although lung cancer group heterogeneity demonstrates a high degree of heterogeneity between subjects.

(4)个人网络与单器官分析(4) Personal network and single organ analysis

我们为一名从Covid-19出院后30天的受试者和一名原因不明的胃肠道出血的患者分别构建了一个单独的连接网络,如图5所示。左边是所有感兴趣的器官的连接矩阵,右边是网络连接,其中较暗的线表示节点之间更强的连接,黑色的程度表示给定节点的强度。图5揭示了器官之间的代谢连接信息。对于从Covid-19出院的受试者,作为异常中枢的肺具有最强的连接强度,特别是对于左心室和脑(图5中B)。如图6所示,强度与器官ΔSUV显著相关(R=0.973和R=0.893,P<0.05),表明SUV与对照组平均值有多少偏差。这些表明,一个单独的网络可以揭示网络和器官水平的代谢异常。We constructed a separate connectivity network for a subject 30 days after discharge from Covid-19 and a patient with unexplained gastrointestinal bleeding, as shown in Figure 5. On the left is the connectivity matrix of all organs of interest and on the right is the network connectivity, where darker lines represent stronger connections between nodes and the degree of black represents the strength of a given node. Figure 5 reveals metabolic connectivity information between organs. For subjects discharged from Covid-19, the lung as an abnormal hub had the strongest connectivity strength, especially for the left ventricle and brain (Fig. 5B). As shown in Figure 6, intensity was significantly correlated with organ ΔSUV (R=0.973 and R=0.893, P<0.05), indicating how much SUV deviates from the control mean. These suggest that a single network can reveal metabolic abnormalities at the network and organ levels.

综上,我们提出了一个框架,应用网络原理分析全身PET数据,提供了一个平台,以确定系统水平的代谢功能障碍,这是目前分析所不可能的。可以揭示代谢连接性的细微偏差,并且与器官水平的SUV测量高度相关。本发明可以潜在地识别系统性代谢异常,由于疾病组之间的巨大异质性,这不能通过传统的群体水平方法得出。这种异质性可能是由于疾病表达差异或系统功能改变所致。换句话说,从网络的角度来看,所提出的方法是对传统方法的补充。应该注意的是,所提出的方法没有提供用于扫描的真实代谢连接网络,而是针对参考网络的扰动网络,其反映了系统水平上正常和疾病样本之间的变化。尽管需要一组参考数据组,但全身SUV PET通常可用于常规PET成像。在个体水平上推导代谢网络的另一种方法是利用动态PET,其中器官的时间-活动曲线在受试者水平上相关。然而,区域动力学携带非特异性示踪剂结合和递送的信息,这可能隐藏示踪剂与其靶标的特异性相互作用。In conclusion, we propose a framework that applies network principles to analyze whole-body PET data, providing a platform to identify metabolic dysfunction at the systemic level, which is currently impossible to analyze. Subtle biases in metabolic connectivity can be revealed and are highly correlated with organ-level SUV measurements. The present invention can potentially identify systemic metabolic abnormalities that cannot be derived by traditional population-level approaches due to the large heterogeneity among disease groups. This heterogeneity may be due to differences in disease expression or altered system function. In other words, from the network point of view, the proposed method is complementary to traditional methods. It should be noted that the proposed method does not provide a real metabolic connectivity network for scanning, but a perturbed network for the reference network, which reflects the variation between normal and disease samples at the system level. Whole-body SUV PET is generally available for routine PET imaging, although a reference data set is required. Another approach to deriving metabolic networks at the individual level is to utilize dynamic PET, in which the time-activity curves of organs are correlated at the subject level. However, regiodynamics carry information on nonspecific tracer binding and delivery, which may hide the specific interaction of the tracer with its target.

我们基于PET/CT SUV图像构建了个体代谢网络。然而,我们的方法可以适用于使用其他功能参数,例如当动态扫描可用时的净代谢率,血流量,磷酸化率。同样,它可以很容易地应用于非FDG示踪剂,例如可视化神经递质的示踪剂,以揭示受试者水平上的脑器官相互作用异常。We constructed individual metabolic networks based on PET/CT SUV images. However, our method can be adapted to use other functional parameters such as net metabolic rate, blood flow, phosphorylation rate when dynamic scans are available. Likewise, it can easily be applied to non-FDG tracers, such as those that visualize neurotransmitters, to reveal abnormalities in brain-organ interaction at the subject level.

本发明可以使用受试者的全身PET/CT SUV图像和健康对照组构建个体代谢异常网络。本发明提出的方法可调查个体水平的全身代谢异常,表征了个体水平的葡萄糖代谢的分子连接性,这是目前的分析方法所不能的。本发明的方法可以潜在地识别系统性代谢异常,由于肺癌组之间的巨大异质性,这不能通过传统的群体水平方法得出。此外本发明可以从系统的角度研究大脑和其他器官如何在健康和疾病状况下相互作用。The present invention can construct an individual metabolic abnormality network using the whole body PET/CT SUV image of the subject and the healthy control group. The method proposed by the present invention can investigate the systemic metabolic abnormalities at the individual level and characterize the molecular connectivity of glucose metabolism at the individual level, which is not possible with current analytical methods. The methods of the present invention can potentially identify systemic metabolic abnormalities, which cannot be derived by traditional population-level approaches due to the large heterogeneity among lung cancer groups. In addition, the present invention can study how the brain and other organs interact in health and disease conditions from a systems perspective.

以上所示仅是本发明的优选实施方式,应当指出,对于本技术领域的普通技术人员来说,在不脱离本发明原理的前提下,还可以做出若干改进和润饰,这些改进和润饰也应视为本发明的保护范围。The above are only the preferred embodiments of the present invention. It should be pointed out that for those skilled in the art, without departing from the principles of the present invention, several improvements and modifications can be made. It should be regarded as the protection scope of the present invention.

Claims (6)

1. A method for investigating systemic metabolic abnormalities at an individual level using a systemic SUV image, comprising:
step 1, data acquisition and processing: acquiring 18F-FDG PET/CT scanning data of different sampling areas of different subjects to obtain images with standard uptake values SUV of the different subjects, and selecting the sampling areas through the images; the subjects included a healthy control group consisting of subjects without any disease record, a lung cancer group consisting of subjects diagnosed with lung cancer with different lesions, subjects 30 days after discharge of Covid-19, subjects with unexplained gastrointestinal bleeding;
the step 1 comprises the following steps:
step 1.1: firstly, carrying out CT scanning to carry out attenuation correction, and then carrying out 18F-FDG PET/CT acquisition; reconstructing the scan data into a voxel size-fixed matrix using a 3D ordered subset expectation-maximization algorithm; performing attenuation and scatter correction using the CT-based attenuation correction map; then, converting the reconstructed moving images into images with standard uptake values SUV by normalizing the injection dosage and the weight;
step 1.2: for each scan, a sampled region of interest of all organs of interest is delineated on the SUV image; the sampling region includes the whole brain, blood, left ventricle, lung, liver, pancreas, spleen, left/right kidney, muscle and spine; performing brain cell division by using statistical parameter mapping, extracting a plane containing the brain in a reconstructed image into a new volume, and performing spatial normalization in a Montreal neurological institute space; smoothing the normalized image by a Gaussian filter, dividing the normalized image into areas defined by an AAL2 map, selecting a brainstem, a whole cerebellum, cerebrospinal fluid, a whole white matter, a caudate nucleus, a putamen and a frontal cortex as new sampling areas, and analyzing 18 sampling areas in total in each scanning together with a depicted organ;
step 2, constructing individual connection networks of different subjects, and obtaining the metabolic abnormal degree of each sampling area of the different subjects through the individual connection networks of the different subjects;
and 3, performing control group homogeneity analysis, lung cancer group heterogeneity analysis, group-to-individual network analysis and individual network-to-single organ analysis according to the metabolic abnormality degree of each sampling region of different subjects.
2. The method for investigating individual-level general metabolic abnormalities using a general SUV image according to claim 1, wherein said step 2 comprises:
step 2.1, constructing a reference metabolic network refNET from the health control group, wherein the reference metabolic network is obtained by calculating Pearson correlation coefficients between SUVs of each region pair and adopts a covariance network structure;
step 2.2: adding a patient to the healthy control group to form a new group so as to construct a new structural covariance network, wherein the network is marked as a perturbation network ptbNET;
step 2.3, calculating the difference between the disturbance network ptbNET and the reference network refNET as a residual network resNET; setting a threshold of 0.3 to eliminate weak correlation; a Z-score map of the remaining network resNET is obtained:
Figure FDA0003846573470000021
where N is the total number of topics in the new group, the remaining networks essentially represent an abnormal level of connectivity, each network consisting of 153 edges connecting 18 regions, each edge exhibiting a different degree of metabolic variation; to quantify the degree of anomaly, the intensity STR of each region anomaly is defined:
Figure FDA0003846573470000022
where m is the index number of the region,
Figure FDA0003846573470000023
is a set of the data to be transmitted,
Figure FDA0003846573470000024
m =18 is the number of zones, ZCC mi Representing the correlation coefficient of the Z-fraction graph between the region m and its neighboring regions i, the total number of neighboring nodes being equal to m-1.
3. The method for investigating individual-level general metabolic abnormalities using whole-body SUV images as claimed in claim 2, wherein in said step 3, the control homogeneity analysis is performed as follows:
subjects in each healthy control group were subjected to individual network analysis, intra-group similarity was measured by averaging the Z-fractional Pearson correlation coefficient between any pair of networks, and then re-sampling was performed to test subject selection repeatability.
4. The method for investigating individual-level general metabolic abnormalities using whole-body SUV images as claimed in claim 2, wherein in said step 3, lung cancer group heterogeneity analysis is performed as follows:
the intensity of the personal network of each lung cancer patient was compared to the intensity in the reference network and the similarity between the lung cancer patient networks was calculated by measuring the average of the Pearson correlation coefficients between the subjects between the paired Z-scores on all 153 edges.
5. The method for investigating metabolic abnormalities of the whole body at an individual level using whole body SUV images as set forth in claim 2, wherein in step 3, the group-to-individual level network analysis is performed as follows:
establishing group-level metabolic networks for the patient group and the healthy control group, respectively, establishing two group-level metabolic networks by calculating Pearson correlations of pairs of brain regions of all subjects in the two groups, normalized differences between the two group-level metabolic networks being considered as group-level difference networks Diff group,i
Figure FDA0003846573470000025
Where i represents an edge, patNET represents a group-level metabolic network of a patient group, refNET represents a group-level metabolic network of a healthy control group;
constructing an average residual network Diff by averaging the Z-scores for each edge across all patient networks individual,i
Figure FDA0003846573470000031
Where j is the patient index number, N p Is the total number of patients;
calculating average residual error network Diff individual,i And group-level differentiated network Diff group,i Pears in betweenThe on correlation coefficient.
6. The method for investigating metabolic disorders of the whole body at the individual level using whole body SUV images as claimed in claim 2, wherein in step 3, the personal network and single organ analysis is performed as follows:
separate connection networks were constructed for one subject 30 days after Covid-19 discharge and one subject with unexplained gastrointestinal bleeding, and the change in SUV was quantified based on the network strength of the organ.
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