CN113683666B - Engineering bacterium obtained by YH66-RS07020 gene modification and application thereof in valine preparation - Google Patents
Engineering bacterium obtained by YH66-RS07020 gene modification and application thereof in valine preparation Download PDFInfo
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Abstract
本发明公开了YH66‑RS07020基因改造得到的工程菌及其在制备缬氨酸中的应用。本发明提供了用于抑制YH66‑RS07020基因表达的物质或降低YH66‑RS07020蛋白丰度的物质或降低YH66‑RS07020蛋白活性的物质在提高细菌缬氨酸产量中的应用。本发明发现YH66‑RS07020蛋白对细菌的缬氨酸产量存在负调控,即YH66‑RS07020蛋白含量增高、缬氨酸产量降低,YH66‑RS07020蛋白含量降低、缬氨酸产量增高。抑制YH66‑RS07020基因表达可以提高缬氨酸产量,过表达YH66‑RS07020基因降低缬氨酸产量。进一步,本发明发现了YH66‑RS07020C251T蛋白及其编码基因和应用。本发明对于缬氨酸工业化生产,具有重大的应用价值。The present invention discloses an engineered bacterium obtained by genetic modification of YH66-RS07020 and its application in the preparation of valine. The present invention provides an application of a substance for inhibiting the expression of YH66-RS07020 gene or a substance for reducing the abundance of YH66-RS07020 protein or a substance for reducing the activity of YH66-RS07020 protein in increasing the valine production of bacteria. The present invention finds that the YH66-RS07020 protein has a negative regulation on the valine production of bacteria, that is, the YH66-RS07020 protein content increases and the valine production decreases, and the YH66-RS07020 protein content decreases and the valine production increases. Inhibiting the expression of YH66-RS07020 gene can increase the valine production, and overexpressing the YH66-RS07020 gene reduces the valine production. Further, the present invention discovers the YH66-RS07020 C251T protein and its encoding gene and application. The present invention has great application value for the industrial production of valine.
Description
技术领域Technical Field
本发明属于生物技术领域,涉及一种YH66-RS07020基因改造得到的工程菌及其在制备缬氨酸中的应用,具体的所述改造为C251T。The invention belongs to the field of biotechnology and relates to an engineered bacterium obtained by genetically modifying YH66-RS07020 and application thereof in preparing valine, and specifically the modification is C251T.
背景技术Background Art
缬氨酸是组成蛋白质的20种氨基酸之一,是人体必需的8种氨基酸和生糖氨基酸,它与其他两种高浓度氨基酸(异亮氨酸和亮氨酸)一起工作促进身体正常生长,修复组织,调节血糖,并提供需要的能量。在参加激烈体力活动时,缬氨酸可以给肌肉提供额外的能量产生葡萄糖,以防止肌肉衰弱。缬氨酸还帮助从肝脏清除多余的氮(潜在的毒素),并将身体需要的氮运输到各个部位。Valine is one of the 20 amino acids that make up protein. It is one of the 8 essential amino acids and glycogenic amino acids for the human body. It works with two other high-concentration amino acids (isoleucine and leucine) to promote normal growth, repair tissues, regulate blood sugar, and provide the necessary energy. When participating in intense physical activities, valine can provide muscles with extra energy to produce glucose to prevent muscle weakness. Valine also helps remove excess nitrogen (potential toxins) from the liver and transports nitrogen needed by the body to various parts.
缬氨酸是一种必需氨基酸,这意味着身体本身不能生产,必须通过膳食来源获得补充。它的天然食物来源包括谷物、奶制品、香菇、蘑菇、花生、大豆蛋白和肉类。尽管大多数人都可以从饮食中获得足够的数量,但是缬氨酸缺乏症的案例也屡见不鲜。当缬氨酸不足时,大脑中枢神经系统功能会发生紊乱,共济失调而出现四肢震颤。通过解剖切片脑组织,发现有红核细胞变性现象,晚期肝硬化病人因肝功能损害,易形成高胰岛素血症,致使血中支链氨基酸减少,支链氨基酸和芳香族氨基酸的比值由正常人的3.0-3.5降至1.0-1.5,故常用缬氨酸等支链氨基酸的注射液治疗肝功能衰竭以及酗酒和吸毒对这些器官造成的损害。此外,缬氨酸也可作为加快创伤愈合的治疗剂。L-缬氨酸,别名为2-氨基-3-甲基丁酸,CAS号为72-18-4,MDL号为MFCD00064220,EINECS号为200-773-6。目前制备L-缬氨酸主要是化学合成法。化学合成法的局限性:生产成本高,反应复杂,步骤多,且有许多副产物。Valine is an essential amino acid, which means that the body cannot produce it on its own and must be supplemented through dietary sources. Its natural food sources include grains, dairy products, shiitake mushrooms, mushrooms, peanuts, soy protein and meat. Although most people can get enough from their diet, cases of valine deficiency are not uncommon. When valine is insufficient, the function of the central nervous system of the brain will be disordered, and ataxia and tremors of the limbs will occur. Through the dissection of brain tissue, it was found that there was red nuclear cell degeneration. Patients with advanced cirrhosis are prone to hyperinsulinemia due to liver damage, which leads to a decrease in branched-chain amino acids in the blood. The ratio of branched-chain amino acids to aromatic amino acids drops from 3.0-3.5 in normal people to 1.0-1.5. Therefore, injections of branched-chain amino acids such as valine are often used to treat liver failure and damage to these organs caused by alcoholism and drug abuse. In addition, valine can also be used as a therapeutic agent to accelerate wound healing. L-valine, also known as 2-amino-3-methylbutyric acid, has a CAS number of 72-18-4, an MDL number of MFCD00064220, and an EINECS number of 200-773-6. Currently, L-valine is mainly prepared by chemical synthesis. The limitations of chemical synthesis include high production costs, complex reactions, multiple steps, and many by-products.
发明内容Summary of the invention
本发明的目的是提供一种YH66-RS07020基因改造得到的工程菌及其在制备缬氨酸中的应用。The purpose of the present invention is to provide an engineered bacterium obtained by genetic modification of YH66-RS07020 and its application in the preparation of valine.
本发明提供了用于抑制YH66-RS07020基因表达的物质或降低YH66-RS07020蛋白丰度的物质或降低YH66-RS07020蛋白活性的物质的应用;The present invention provides the use of a substance for inhibiting the expression of the YH66-RS07020 gene or a substance for reducing the abundance of the YH66-RS07020 protein or a substance for reducing the activity of the YH66-RS07020 protein;
所述应用为如下(Ⅰ)或(Ⅱ)或(Ⅲ):The application is as follows (I) or (II) or (III):
(Ⅰ)在提高细菌缬氨酸产量中的应用;(Ⅰ) Application in increasing bacterial valine production;
(Ⅱ)在生产缬氨酸中的应用;(II) Application in the production of valine;
(Ⅲ)在提高细菌菌量中的应用。(III) Application in increasing bacterial count.
所述YH66-RS07020基因为编码YH66-RS07020蛋白的基因。The YH66-RS07020 gene is a gene encoding the YH66-RS07020 protein.
所述YH66-RS07020蛋白为如下(a1)或(a2)或(a3):The YH66-RS07020 protein is as follows (a1) or (a2) or (a3):
(a1)序列表的序列3所示的蛋白质;(a1) the protein shown in Sequence 3 of the Sequence Listing;
(a2)来源于细菌且与(a1)具有95%以上同一性且与细菌产缬氨酸相关的蛋白质;(a2) a protein derived from bacteria that has more than 95% identity with (a1) and is associated with bacterial valine production;
(a3)将(a1)所示的蛋白质经过一个或几个氨基酸残基的取代和/或缺失和/或添加得到的且与细菌产缬氨酸相关的由(a1)衍生的蛋白质。(a3) A protein derived from (a1) which is related to bacterial valine production and is obtained by substituting and/or deleting and/or adding one or more amino acid residues of the protein shown in (a1).
这里使用的术语“同一性”指与天然氨基酸序列的序列相似性。同一性可以用肉眼或计算机软件进行评价。使用计算机软件,两个或多个序列之间的同一性可以用百分比(%)表示,其可以用来评价相关序列之间的同一性。The term "identity" as used herein refers to sequence similarity to a natural amino acid sequence. Identity can be evaluated by the naked eye or by computer software. Using computer software, the identity between two or more sequences can be expressed as a percentage (%), which can be used to evaluate the identity between related sequences.
所述95%以上同一性具体可为96%以上同一性或97%以上同一性或98%以上同一性或99%以上同一性。The 95% or greater identity may specifically be 96% or greater identity, or 97% or greater identity, or 98% or greater identity, or 99% or greater identity.
具体的,所述YH66-RS07020基因为如下(b1)或(b2)或(b3):Specifically, the YH66-RS07020 gene is as follows (b1) or (b2) or (b3):
(b1)编码区如序列表的序列4所示的DNA分子;(b1) a DNA molecule whose coding region is as shown in Sequence 4 of the Sequence Listing;
(b2)来源于细菌且与(b1)具有95%以上同一性且编码所述蛋白质的DNA分子;(b2) a DNA molecule derived from bacteria and having more than 95% identity with (b1) and encoding the protein;
(b3)在严格条件下与(b1)杂交且编码所述蛋白质的DNA分子。(b3) A DNA molecule that hybridizes with (b1) under stringent conditions and encodes the protein.
这里使用的术语“同一性”指与天然核酸序列的序列相似性。同一性可以用肉眼或计算机软件进行评价。使用计算机软件,两个或多个序列之间的同一性可以用百分比(%)表示,其可以用来评价相关序列之间的同一性。The term "identity" as used herein refers to sequence similarity to a natural nucleic acid sequence. Identity can be evaluated by the naked eye or by computer software. Using computer software, the identity between two or more sequences can be expressed as a percentage (%), which can be used to evaluate the identity between related sequences.
所述95%以上同一性具体可为96%以上同一性或97%以上同一性或98%以上同一性或99%以上同一性。The 95% or greater identity may specifically be 96% or greater identity, or 97% or greater identity, or 98% or greater identity, or 99% or greater identity.
所述严格条件可为在0.1×SSPE(或0.1×SSC),0.1%SDS的溶液中,在65℃条件下杂交并洗膜。The stringent conditions may be hybridization and membrane washing in a solution of 0.1×SSPE (or 0.1×SSC), 0.1% SDS at 65°C.
所述抑制YH66-RS07020基因表达可为敲除YH66-RS07020基因,也可为突变YH66-RS07020基因。The inhibition of YH66-RS07020 gene expression may be knocking out the YH66-RS07020 gene or mutating the YH66-RS07020 gene.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为序列表的序列5所示的DNA分子或具有序列表的序列5所示的DNA分子的重组质粒。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be a DNA molecule shown in Sequence 5 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 5 of the sequence listing.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为序列表的序列8所示的DNA分子或具有序列表的序列8所示的DNA分子的重组质粒。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be a DNA molecule shown in Sequence 8 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 8 of the sequence listing.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为实施例中的重组质粒pK18-YH66-RS07020C251T或重组质粒pK18-ΔYH66-RS07020。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be the recombinant plasmid pK18-YH66-RS07020 C251T or the recombinant plasmid pK18-ΔYH66-RS07020 in the examples.
本发明还提供了一种重组菌,是抑制细菌中的YH66-RS07020基因表达得到的。The present invention also provides a recombinant bacterium obtained by inhibiting the expression of the YH66-RS07020 gene in the bacterium.
所述抑制细菌中的YH66-RS07020基因表达可为敲除细菌中的YH66-RS07020基因,也可为突变细菌中的YH66-RS07020基因。The inhibition of YH66-RS07020 gene expression in bacteria may be performed by knocking out the YH66-RS07020 gene in bacteria, or by mutating the YH66-RS07020 gene in bacteria.
所述敲除可为敲除基因的部分区段,也可为敲除基因的整个编码框。The knockout may be a partial segment of a knockout gene, or the entire coding frame of a knockout gene.
示例性的,敲除细菌中的YH66-RS07020基因具体可为:使细菌基因组DNA中缺失序列表的序列4所示的DNA分子。Exemplarily, knocking out the YH66-RS07020 gene in bacteria may specifically include: deleting the DNA molecule shown in Sequence 4 of the sequence list from the bacterial genomic DNA.
对于突变细菌中的YH66-RS07020基因,本领域普通技术人员可以很容易地采用已知的方法,例如定向突变或基因编辑等。For mutating the YH66-RS07020 gene in bacteria, a person skilled in the art can easily adopt known methods, such as targeted mutagenesis or gene editing.
示例性的,突变细菌中的YH66-RS07020基因具体可为:使细菌基因组DNA中编码的YH66-RS07020蛋白的第84位氨基酸残基的密码子由编码A的密码子突变为编码其他氨基酸残基的密码子。具体的,所述其他氨基酸残基为V。Exemplarily, the YH66-RS07020 gene in the mutated bacteria can be specifically mutated such that the codon for the 84th amino acid residue of the YH66-RS07020 protein encoded in the bacterial genomic DNA is mutated from a codon encoding A to a codon encoding other amino acid residues. Specifically, the other amino acid residue is V.
示例性的,突变细菌中的YH66-RS07020基因具体可为:使细菌基因组DNA中的YH66-RS07020基因发生如下点突变:第251位核苷酸由C突变为其他核苷酸(具体可为T)。Exemplarily, the YH66-RS07020 gene in the mutated bacteria may be specifically caused by causing the following point mutation to occur in the YH66-RS07020 gene in the bacterial genomic DNA: the 251st nucleotide is mutated from C to other nucleotides (specifically T).
示例性的,抑制细菌中的YH66-RS07020基因表达的实现方式可为:在细菌中导入用于抑制YH66-RS07020基因表达的物质。Exemplarily, the method of inhibiting the expression of the YH66-RS07020 gene in bacteria may be: introducing a substance for inhibiting the expression of the YH66-RS07020 gene into the bacteria.
所述用于抑制YH66-RS07020基因表达的物质具体可为序列表的序列5所示的DNA分子或具有序列表的序列5所示的DNA分子的重组质粒。The substance used to inhibit the expression of the YH66-RS07020 gene can specifically be a DNA molecule shown in Sequence 5 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 5 of the sequence listing.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为序列表的序列8所示的DNA分子或具有序列表的序列8所示的DNA分子的重组质粒。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be a DNA molecule shown in Sequence 8 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 8 of the sequence listing.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为实施例中的重组质粒pK18-YH66-RS07020C251T或重组质粒pK18-ΔYH66-RS07020。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be the recombinant plasmid pK18-YH66-RS07020 C251T or the recombinant plasmid pK18-ΔYH66-RS07020 in the examples.
本发明还保护所述重组菌在制备缬氨酸中的应用。The present invention also protects the use of the recombinant bacteria in preparing valine.
本发明还保护一种制备缬氨酸的方法,包括如下步骤:发酵所述重组菌。The present invention also protects a method for preparing valine, comprising the following steps: fermenting the recombinant bacteria.
本领域技术人员可以采用现有技术中的发酵方法进行发酵。也可通过常规试验进行发酵方法的优化和改进。可以在本领域中已知的发酵条件下在合适的培养基中进行细菌的发酵。培养基可以包含:碳源、氮源、微量元素、及其组合。在培养中,可以调节培养物的pH。此外,培养时可以包括防止气泡产生,例如通过使用消泡剂进行气泡产生的防止。此外,培养时可以包括将气体注射入培养物中。气体可以包括能够维持培养物的需氧条件的任何气体。在培养中,培养物的温度可以是20至45℃。Those skilled in the art can use the fermentation method in the prior art for fermentation. The fermentation method can also be optimized and improved by conventional experiments. The fermentation of bacteria can be carried out in a suitable culture medium under fermentation conditions known in the art. The culture medium may contain: a carbon source, a nitrogen source, trace elements, and a combination thereof. During the culture, the pH of the culture can be adjusted. In addition, the culture may include preventing the generation of bubbles, such as by using a defoamer to prevent the generation of bubbles. In addition, the culture may include injecting gas into the culture. The gas may include any gas capable of maintaining aerobic conditions of the culture. During the culture, the temperature of the culture may be 20 to 45°C.
所述方法还可包括如下步骤:从培养物中获得缬氨酸。从培养物中获得缬氨酸可通过各种方式实现,包括但不限于:用硫酸或氢氯酸等处理培养物,接着进行诸如阴离子交换层析、浓缩、结晶和等电点沉淀的方法的组合。The method may further comprise the step of obtaining valine from the culture. The valine may be obtained from the culture by various methods, including but not limited to treating the culture with sulfuric acid or hydrochloric acid, followed by a combination of methods such as anion exchange chromatography, concentration, crystallization and isoelectric precipitation.
所述发酵中,示例性的发酵培养基的配方见表3,余量为水。In the fermentation, the formula of the exemplary fermentation medium is shown in Table 3, and the balance is water.
所述发酵中,示例性的发酵控制工艺见表4。In the fermentation, exemplary fermentation control processes are shown in Table 4.
示例性的,所述发酵中,完成接种的初始时刻,体系OD值可为0.3-0.5。Exemplarily, during the fermentation, at the initial moment of completing the inoculation, the OD value of the system may be 0.3-0.5.
示例性的,所述发酵的发酵过程中:用于调pH的为氨水;发酵体系中有泡沫时,加入适量消泡剂antifoam(CB-442);通过补加70%葡萄糖水溶液控制体系含糖量(残糖)。Exemplarily, during the fermentation process: ammonia water is used to adjust the pH; when there is foam in the fermentation system, an appropriate amount of antifoam (CB-442) is added; and the sugar content (residual sugar) of the system is controlled by adding 70% glucose aqueous solution.
本发明还提供了一种提高细菌的缬氨酸产量的方法,包括如下步骤:抑制细菌中的YH66-RS07020基因表达或降低细菌中YH66-RS07020蛋白丰度或降低细菌中YH66-RS07020蛋白活性。The present invention also provides a method for increasing the valine production of bacteria, comprising the following steps: inhibiting the expression of the YH66-RS07020 gene in the bacteria or reducing the abundance of the YH66-RS07020 protein in the bacteria or reducing the activity of the YH66-RS07020 protein in the bacteria.
所述抑制细菌中的YH66-RS07020基因表达可为敲除细菌中的YH66-RS07020基因,也可为突变细菌中的YH66-RS07020基因。The inhibition of YH66-RS07020 gene expression in bacteria may be performed by knocking out the YH66-RS07020 gene in bacteria, or by mutating the YH66-RS07020 gene in bacteria.
所述敲除可为敲除基因的部分区段,也可为敲除基因的整个编码框。The knockout may be a partial segment of a knockout gene, or the entire coding frame of a knockout gene.
示例性的,敲除细菌中的YH66-RS07020基因具体可为:使细菌基因组DNA中缺失序列表的序列4所示的DNA分子。Exemplarily, knocking out the YH66-RS07020 gene in bacteria may specifically include: deleting the DNA molecule shown in Sequence 4 of the sequence list from the bacterial genomic DNA.
对于突变细菌中的YH66-RS07020基因,本领域普通技术人员可以很容易地采用已知的方法,例如定向突变或基因编辑等。For mutating the YH66-RS07020 gene in bacteria, a person skilled in the art can easily adopt known methods, such as targeted mutagenesis or gene editing.
示例性的,突变细菌中的YH66-RS07020基因具体可为:使细菌基因组DNA中编码的YH66-RS07020蛋白的第84位氨基酸残基的密码子由编码A的密码子突变为编码其他氨基酸残基的密码子。具体的,所述其他氨基酸残基为V。Exemplarily, the YH66-RS07020 gene in the mutated bacteria can be specifically mutated such that the codon for the 84th amino acid residue of the YH66-RS07020 protein encoded in the bacterial genomic DNA is mutated from a codon encoding A to a codon encoding other amino acid residues. Specifically, the other amino acid residue is V.
示例性的,突变细菌中的YH66-RS07020基因具体可为:使细菌基因组DNA中的YH66-RS07020基因发生如下点突变:第251位核苷酸由C突变为其他核苷酸(具体可为T)。Exemplarily, the YH66-RS07020 gene in the mutated bacteria may be specifically caused by causing the following point mutation to occur in the YH66-RS07020 gene in the bacterial genomic DNA: the 251st nucleotide is mutated from C to other nucleotides (specifically T).
示例性的,抑制细菌中的YH66-RS07020基因表达的实现方式可为:在细菌中导入用于抑制YH66-RS07020基因表达的物质。Exemplarily, the method of inhibiting the expression of the YH66-RS07020 gene in bacteria may be: introducing a substance for inhibiting the expression of the YH66-RS07020 gene into the bacteria.
所述用于抑制YH66-RS07020基因表达的物质具体可为序列表的序列5所示的DNA分子或具有序列表的序列5所示的DNA分子的重组质粒。The substance used to inhibit the expression of the YH66-RS07020 gene can specifically be a DNA molecule shown in Sequence 5 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 5 of the sequence listing.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为序列表的序列8所示的DNA分子或具有序列表的序列8所示的DNA分子的重组质粒。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be a DNA molecule shown in Sequence 8 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 8 of the sequence listing.
示例性的,所述用于抑制YH66-RS07020基因表达的物质具体可为实施例中的重组质粒pK18-YH66-RS07020C251T或重组质粒pK18-ΔYH66-RS07020。Exemplarily, the substance for inhibiting the expression of the YH66-RS07020 gene may specifically be the recombinant plasmid pK18-YH66-RS07020 C251T or the recombinant plasmid pK18-ΔYH66-RS07020 in the examples.
本发明还保护YH66-RS07020蛋白在调控细菌的缬氨酸产量中的应用。The present invention also protects the application of the YH66-RS07020 protein in regulating the valine production of bacteria.
所述调控为负调控,即YH66-RS07020蛋白含量增高,缬氨酸产量降低。The regulation is negative regulation, that is, the protein content of YH66-RS07020 increases and the valine production decreases.
所述调控为负调控,即YH66-RS07020蛋白含量降低,缬氨酸产量增高。The regulation is negative regulation, that is, the protein content of YH66-RS07020 is reduced and the valine production is increased.
本发明还保护YH66-RS07020蛋白在调控细菌的菌量中的应用。The present invention also protects the application of the YH66-RS07020 protein in regulating the bacterial quantity.
所述调控为负调控,即YH66-RS07020蛋白含量增高,细菌菌量降低。The regulation is negative regulation, that is, the YH66-RS07020 protein content increases and the bacterial count decreases.
所述调控为负调控,即YH66-RS07020蛋白含量降低,细菌菌量增高。The regulation is negative regulation, that is, the YH66-RS07020 protein content is reduced and the bacterial count is increased.
本发明还保护一种突变蛋白,命名为YH66-RS07020C251T蛋白,是将YH66-RS07020蛋白第84位氨基酸残基由A突变为其他氨基酸残基得到的。The present invention also protects a mutant protein named as YH66-RS07020 C251T protein, which is obtained by mutating the 84th amino acid residue of the YH66-RS07020 protein from A to other amino acid residues.
具体的,所述其他氨基酸残基为V。Specifically, the other amino acid residue is V.
示例性的,所述突变蛋白如序列表的序列1所示。Exemplarily, the mutant protein is shown in Sequence 1 of the Sequence Listing.
本发明还保护YH66-RS07020C251T蛋白的编码基因(命名为YH66-RS07020C251T基因)。The present invention also protects the gene encoding the YH66-RS07020 C251T protein (named as the YH66-RS07020 C251T gene).
本发明还保护具有YH66-RS07020C251T基因的表达盒或具有YH66-RS07020C251T基因的重组载体或具有YH66-RS07020C251T基因的重组菌。The present invention also protects an expression cassette having the YH66-RS07020 C251T gene, a recombinant vector having the YH66-RS07020 C251T gene, or a recombinant bacterium having the YH66-RS07020 C251T gene.
具体的,YH66-RS07020C251T基因为如下(c1)或(c2)或(c3):Specifically, the YH66-RS07020 C251T gene is as follows (c1) or (c2) or (c3):
(c1)编码区如序列表的序列2所示的DNA分子;(c1) a DNA molecule whose coding region is as shown in Sequence 2 of the Sequence Listing;
(c2)来源于细菌且与(c1)具有95%以上同一性且编码所述蛋白质的DNA分子;(c2) a DNA molecule derived from bacteria and having more than 95% identity with (c1) and encoding the protein;
(c3)在严格条件下与(c1)杂交且编码所述蛋白质的DNA分子。(c3) A DNA molecule that hybridizes with (c1) under stringent conditions and encodes the protein.
这里使用的术语“同一性”指与天然核酸序列的序列相似性。同一性可以用肉眼或计算机软件进行评价。使用计算机软件,两个或多个序列之间的同一性可以用百分比(%)表示,其可以用来评价相关序列之间的同一性。The term "identity" as used herein refers to sequence similarity to a natural nucleic acid sequence. Identity can be evaluated by the naked eye or by computer software. Using computer software, the identity between two or more sequences can be expressed as a percentage (%), which can be used to evaluate the identity between related sequences.
所述95%以上同一性具体可为96%以上同一性或97%以上同一性或98%以上同一性或99%以上同一性。The 95% or greater identity may specifically be 96% or greater identity, or 97% or greater identity, or 98% or greater identity, or 99% or greater identity.
所述严格条件可为在0.1×SSPE(或0.1×SSC),0.1%SDS的溶液中,在65℃条件下杂交并洗膜。The stringent conditions may be hybridization and membrane washing in a solution of 0.1×SSPE (or 0.1×SSC), 0.1% SDS at 65°C.
本发明还保护YH66-RS07020C251T蛋白、YH66-RS07020C251T基因、具有YH66-RS07020C251T基因的表达盒或具有YH66-RS07020C251T的重组载体或具有YH66-RS07020C251T的重组菌在制备缬氨酸中的应用。The present invention also protects the use of the YH66-RS07020 C251T protein, the YH66-RS07020 C251T gene, an expression cassette having the YH66-RS07020 C251T gene, a recombinant vector having the YH66-RS07020 C251T , or a recombinant bacterium having the YH66-RS07020 C251T in the preparation of valine.
本发明还保护一种提高细菌的缬氨酸产量的方法,包括如下步骤:使细菌基因组DNA中编码的YH66-RS07020蛋白的第84位氨基酸残基的密码子由编码A的密码子突变为编码其他氨基酸残基的密码子。The present invention also protects a method for increasing the valine production of bacteria, comprising the following steps: mutating the codon of the 84th amino acid residue of the YH66-RS07020 protein encoded in the bacterial genomic DNA from a codon encoding A to a codon encoding other amino acid residues.
具体的,所述其他氨基酸残基为V。Specifically, the other amino acid residue is V.
所述方法具体包括如下步骤:使细菌基因组DNA中的YH66-RS07020基因发生如下点突变:第251位核苷酸由C突变为其他核苷酸(具体可为T)。The method specifically comprises the following steps: causing the YH66-RS07020 gene in the bacterial genomic DNA to undergo the following point mutation: the 251st nucleotide is mutated from C to other nucleotides (specifically T).
所述方法具体包括如下步骤:在细菌中导入序列表的序列5所示的DNA分子或具有序列表的序列5所示的DNA分子的重组质粒。The method specifically comprises the following steps: introducing the DNA molecule shown in Sequence 5 of the sequence listing or a recombinant plasmid having the DNA molecule shown in Sequence 5 of the sequence listing into bacteria.
以上任一所述细菌包括但不限于如下:棒杆菌属细菌,优选嗜乙酰棒杆菌(Corynebacterium acetoacidophilum)、醋谷棒杆菌(Corynebacteriumacetoglutamicum)、美棒杆菌(Corynebacterium callunae)、谷氨酸棒杆菌(Corynebacterium glutamicum)、黄色短杆菌(Brevibacterium flavum)、乳糖发酵短杆菌(Brevibacterium lactofermentum)、产氨棒杆菌(Corynebacterium ammoniagenes)、北京棒杆菌(Corynebacterium pekinense)、解糖短杆菌(Brevibacterium saccharolyticum)、玫瑰色短杆菌(Brevibacterium roseum)、生硫短杆菌(Brevibacterium thiogenitalis)。Any of the above bacteria include, but are not limited to, the following: Corynebacterium bacteria, preferably Corynebacterium acetoacidophilum, Corynebacterium acetoglutamicum, Corynebacterium callunae, Corynebacterium glutamicum, Brevibacterium flavum, Brevibacterium lactofermentum, Corynebacterium ammoniagenes, Corynebacterium pekinense, Brevibacterium saccharolyticum, Brevibacterium roseum, and Brevibacterium thiogenitalis.
以上任一所述细菌为具有生产缬氨酸的能力的细菌。Any of the above-mentioned bacteria is a bacterium capable of producing valine.
“具有生产缬氨酸的能力的细菌”是指细菌具有以下能力:在培养基和/或细菌的细胞中产生并累积缬氨酸的能力。从而,当细菌在培养基中培养时可以收集缬氨酸。The term "bacteria having the ability to produce valine" means that the bacteria have the ability to produce and accumulate valine in a culture medium and/or in bacterial cells. Thus, valine can be collected when the bacteria are cultured in a culture medium.
所述细菌可为自然采集的野生型细菌也可为修饰后的细菌。The bacteria may be wild-type bacteria collected naturally or modified bacteria.
“修饰后的细菌”指的是将自然采集的野生型细菌进行人工突变和/或诱变得到的改造后的细菌。"Modified bacteria" refers to modified bacteria obtained by artificially mutating and/or inducing mutations in naturally collected wild-type bacteria.
具体的,所述谷氨酸棒杆菌可为谷氨酸棒杆菌CGMCC21260。Specifically, the Corynebacterium glutamicum may be Corynebacterium glutamicum CGMCC21260.
谷氨酸棒杆菌(Corynebacterium glutamicum)YPFV1,已于2020年11月30日保藏于中国微生物菌种保藏管理委员会普通微生物中心(简称CGMCC,地址为:北京市朝阳区北辰西路1号院3号,中国科学院微生物研究所),保藏登记号为CGMCC No.21260。谷氨酸棒杆菌(Corynebacterium glutamicum)YPFV1,又称为谷氨酸棒杆菌CGMCC21260。Corynebacterium glutamicum YPFV1 was deposited in the General Microbiology Center of China Microorganism Culture Collection Committee (referred to as CGMCC, address: No. 3, No. 1 Beichen West Road, Chaoyang District, Beijing, Institute of Microbiology, Chinese Academy of Sciences) on November 30, 2020, with the deposit registration number CGMCC No. 21260. Corynebacterium glutamicum YPFV1, also known as Corynebacterium glutamicum CGMCC21260.
以上任一所述缬氨酸的含义为广义的缬氨酸,包括游离形式缬氨酸、缬氨酸的盐或两者的混合物。Any of the above valine means valine in a broad sense, including free valine, valine salts or a mixture of the two.
具体的,所述缬氨酸为L-缬氨酸。Specifically, the valine is L-valine.
以上任何方法或应用还可用于缬氨酸的下游产品的制备。Any of the above methods or applications can also be used for the preparation of downstream products of valine.
谷氨酸棒杆菌中的YH66-RS07020蛋白如序列表的序列3所示,其编码基因如序列表的序列4所示。本发明中通过引入点突变,得到了序列表的序列1所示的YH66-RS07020C251T蛋白,YH66-RS07020C251T蛋白的编码基因如序列表的序列2所示。与YH66-RS07020基因相比,YH66-RS07020C251T基因的差异在于第251位核苷酸由C突变为T。与YH66-RS07020蛋白相比,YH66-RS07020C251T蛋白的差异在于第84位氨基酸残基由A突变为V。The YH66-RS07020 protein in Corynebacterium glutamicum is shown in Sequence 3 of the sequence table, and its encoding gene is shown in Sequence 4 of the sequence table. In the present invention, the YH66-RS07020 C251T protein shown in Sequence 1 of the sequence table is obtained by introducing point mutations, and the encoding gene of the YH66-RS07020 C251T protein is shown in Sequence 2 of the sequence table. Compared with the YH66-RS07020 gene, the difference of the YH66-RS07020 C251T gene is that the 251st nucleotide is mutated from C to T. Compared with the YH66-RS07020 protein, the difference of the YH66-RS07020 C251T protein is that the 84th amino acid residue is mutated from A to V.
本发明发现YH66-RS07020蛋白对细菌的缬氨酸产量存在负调控,即YH66-RS07020蛋白含量增高、缬氨酸产量降低,YH66-RS07020蛋白含量降低、缬氨酸产量增高。抑制YH66-RS07020基因表达可以提高缬氨酸产量,过表达YH66-RS07020基因降低缬氨酸产量。进一步,本发明发现了YH66-RS07020C251T蛋白及其编码基因和应用。本发明对于缬氨酸工业化生产,具有重大的应用价值。The present invention finds that the YH66-RS07020 protein has a negative regulation on the valine production of bacteria, that is, the YH66-RS07020 protein content increases and the valine production decreases, and the YH66-RS07020 protein content decreases and the valine production increases. Inhibiting the expression of the YH66-RS07020 gene can increase the valine production, and overexpressing the YH66-RS07020 gene reduces the valine production. Further, the present invention finds the YH66-RS07020 C251T protein and its encoding gene and application. The present invention has great application value for the industrial production of valine.
具体实施方式DETAILED DESCRIPTION
下面结合具体实施方式对本发明进行进一步的详细描述,给出的实施例仅为了阐明本发明,而不是为了限制本发明的范围。以下提供的实施例可作为本技术领域普通技术人员进行进一步改进的指南,并不以任何方式构成对本发明的限制。The present invention is further described in detail below in conjunction with specific embodiments, and the examples provided are only for illustrating the present invention, rather than for limiting the scope of the present invention. The examples provided below can be used as a guide for further improvements by those of ordinary skill in the art, and do not constitute a limitation of the present invention in any way.
下述实施例中的实验方法,如无特殊说明,均为常规方法,按照本领域内的文献所描述的技术或条件或者按照产品说明书进行。下述实施例中所用的材料、试剂等,如无特殊说明,均可从商业途径得到。pK18mobsacB质粒:Addgene公司;pK18mobsacB质粒中具有卡那霉素抗性基因作为筛选标记。pXMJ19质粒:BioVector质粒载体菌种细胞基因保藏中心;pXMJ19质粒中具有氯霉素抗性基因作为筛选标记。NEBuilder酶:NEB公司。如无特殊说明,实施例中的培养基为配方为表1的培养基(余量为水,pH为7.0)。不含卡那霉素培养基即表1所示的培养基。含卡那霉素的培养基由表1所示的培养基和卡那霉素组成,卡那霉素的含量为50μg/ml。如无特殊说明,实施例中的培养指的是32℃静置培养。实施例中的单链构象多态性聚丙烯酰胺凝胶电泳(sscp-PAGE):采用的胶浓度为8%,电泳胶的组成见表2;电泳条件为:使用1×TBE缓冲液,120V电压,电泳时间10h。The experimental methods in the following examples, unless otherwise specified, are all conventional methods, and are carried out according to the techniques or conditions described in the literature in the art or according to the product instructions. The materials, reagents, etc. used in the following examples, unless otherwise specified, can all be obtained from commercial sources. pK18mobsacB plasmid: Addgene Company; pK18mobsacB plasmid has a kanamycin resistance gene as a screening marker. pXMJ19 plasmid: BioVector plasmid vector strain cell gene collection center; pXMJ19 plasmid has a chloramphenicol resistance gene as a screening marker. NEBuilder enzyme: NEB Company. Unless otherwise specified, the culture medium in the examples is the culture medium with the formula in Table 1 (the balance is water, and the pH is 7.0). The culture medium without kanamycin is the culture medium shown in Table 1. The culture medium containing kanamycin is composed of the culture medium shown in Table 1 and kanamycin, and the content of kanamycin is 50μg/ml. Unless otherwise specified, the culture in the examples refers to static culture at 32°C. The single-strand conformational polymorphism polyacrylamide gel electrophoresis (sscp-PAGE) in the embodiment: the gel concentration used is 8%, and the composition of the electrophoresis gel is shown in Table 2; the electrophoresis conditions are: using 1×TBE buffer, 120V voltage, and electrophoresis time 10h.
如无特殊说明,以下实施例中的定量试验,均设置三次重复实验,结果取平均值。Unless otherwise specified, the quantitative tests in the following examples were performed three times and the results were averaged.
表1Table 1
表2Table 2
实施例1、谷氨酸棒杆菌CGMCC21260的获得Example 1. Acquisition of Corynebacterium glutamicum CGMCC21260
谷氨酸棒杆菌ATCC15168:ATCC中编号为15168的谷氨酸棒杆菌(Corynebacteriumglutamicum)。Corynebacterium glutamicum ATCC15168: Corynebacterium glutamicum with ATCC number 15168.
将谷氨酸棒杆菌ATCC15168进行诱变,获得谷氨酸棒杆菌(Corynebacteriumglutamicum)YPFV1。Corynebacterium glutamicum ATCC15168 was mutated to obtain Corynebacterium glutamicum YPFV1.
谷氨酸棒杆菌(Corynebacterium glutamicum)YPFV1,已于2020年11月30日保藏于中国微生物菌种保藏管理委员会普通微生物中心(简称CGMCC,地址为:北京市朝阳区北辰西路1号院3号,中国科学院微生物研究所),保藏登记号为CGMCC No.21260。谷氨酸棒杆菌(Corynebacterium glutamicum)YPFV1,又称为谷氨酸棒杆菌CGMCC21260。Corynebacterium glutamicum YPFV1 was deposited in the General Microbiology Center of China Microorganism Culture Collection Committee (referred to as CGMCC, address: No. 3, No. 1 Beichen West Road, Chaoyang District, Beijing, Institute of Microbiology, Chinese Academy of Sciences) on November 30, 2020, with the deposit registration number CGMCC No. 21260. Corynebacterium glutamicum YPFV1, also known as Corynebacterium glutamicum CGMCC21260.
实施例2、构建重组菌YPV-013Example 2: Construction of recombinant bacteria YPV-013
P1:5'-CAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGAACGCCCGCATCGAAGACCT-3';P1: 5'- CAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAG AACGCCCGCATCGAAGACCT-3';
P2:5'-GCCGTAGTCCATGAGTACCCAGACGGCGTGCTCG-3';P2: 5'-GCCGTAGTCCATGAGTACCCAGACGGCGTGCTCG-3';
P3:5'-CGAGCACGCCGTCTGGGTACTCATGGACTACGGC-3';P3: 5'-CGAGCACGCCGTCTGGGTACTCATGGACTACGGC-3';
P4:5'-CAGCTATGACCATGATTACGAATTCGAGCTCGGTACCCATCCTAGAGGGGCACTTTTC-3'。P4: 5'- CAGCTATGACCATGATTACGAATTCGAGCTCGGTACCC ATCCTAGAGGGGCACTTTTC-3'.
P5:5'-CGGACTGTTTTCCAACTGGC-3';P5: 5'-CGGACTGTTTTCCAACTGGC-3';
P6:5'-CCGGGGTTTGTTCCATGAGC-3'。P6: 5'-CCGGGGTTTGTTCCATGAGC-3'.
一、构建重组质粒1. Construction of recombinant plasmid
1、以谷氨酸棒杆菌ATCC15168为模板,采用引物P1和引物P2组成的引物对进行PCR扩增,回收扩增产物(674bp)。1. Using Corynebacterium glutamicum ATCC15168 as a template, a primer pair consisting of primer P1 and primer P2 was used for PCR amplification, and the amplified product (674 bp) was recovered.
2、以谷氨酸棒杆菌ATCC15168为模板,采用引物P3和引物P4组成的引物对进行PCR扩增,回收扩增产物(674bp)。2. Using Corynebacterium glutamicum ATCC15168 as a template, a primer pair consisting of primer P3 and primer P4 was used for PCR amplification, and the amplified product (674 bp) was recovered.
3、同时将步骤1回收的扩增产物和步骤2回收的扩增产物作为模板,采用引物P1和引物P4组成的引物对进行PCR扩增(Overlap PCR),回收扩增产物(1314bp)。经测序,扩增产物如序列表的序列5所示。3. The amplified product recovered in step 1 and the amplified product recovered in step 2 were used as templates to perform PCR amplification (Overlap PCR) using a primer pair consisting of primer P1 and primer P4 to recover the amplified product (1314 bp). The amplified product was sequenced as shown in Sequence 5 of the sequence table.
4、取pK18mobsacB质粒,采用限制性内切酶Xba I进行单酶切,回收线性化质粒。4. Take the pK18mobsacB plasmid, use the restriction endonuclease Xba I for single digestion, and recover the linearized plasmid.
5、将步骤3回收的扩增产物与步骤4回收的线性化质粒共孵育(采用NEBuilder酶,50℃孵育30min),得到重组质粒pK18-YH66-RS07020C251T。经测序验证,重组质粒pK18-YH66-RS07020C251T中具有序列表的序列5所示的DNA分子。5. The amplified product recovered in step 3 was co-incubated with the linearized plasmid recovered in step 4 (using NEBuilder enzyme, incubated at 50°C for 30 min) to obtain the recombinant plasmid pK18-YH66-RS07020 C251T . Sequencing verification showed that the recombinant plasmid pK18-YH66-RS07020 C251T contained the DNA molecule shown in sequence 5 of the sequence table.
二、构建重组菌YPV-0132. Construction of recombinant bacteria YPV-013
1、采用重组质粒pK18-YH66-RS07020C251T对谷氨酸棒杆菌CGMCC21260进行电击转化,然后培养。1. The recombinant plasmid pK18-YH66-RS07020 C251T was used to electroporate Corynebacterium glutamicum CGMCC21260, and then cultured.
2、挑取步骤1中的菌株,采用含15%蔗糖的培养基培养,然后挑取单菌落,分别采用含卡那霉素的培养基和不含卡那霉素的培养基进行培养,筛选在含卡那霉素的培养基上不能生长且在不含卡那霉素的培养基上可以生长的菌株。2. Pick the strain in step 1, culture it in a medium containing 15% sucrose, then pick a single colony, culture it in a medium containing kanamycin and a medium without kanamycin, and screen the strain that cannot grow on the medium containing kanamycin but can grow on the medium without kanamycin.
3、取步骤2筛选的菌株,采用引物P5和引物P6组成的引物对进行PCR扩增,然后回收扩增产物(278bp)。3. Take the strain screened in step 2, use the primer pair consisting of primer P5 and primer P6 to perform PCR amplification, and then recover the amplified product (278 bp).
4、取步骤3的扩增产物,先95℃变性10min再冰浴5min,然后进行sscp-PAGE。电泳时,采用重组质粒pK18-YH66-RS07020C251T的扩增片段(即以重组质粒pK18-YH66-RS07020C251T为模板,采用引物P5和引物P6组成的引物对进行PCR扩增的扩增产物)为阳性对照,采用谷氨酸棒杆菌CGMCC21260的扩增片段(即以谷氨酸棒杆菌CGMCC21260为模板,采用引物P5和引物P6组成的引物对进行PCR扩增的扩增产物)为阴性对照,水作为空白对照。由于片段结构不同,电泳位置不同,电泳位置与阴性对照不一致且与阳性对照一致的菌株为筛选的目的菌株(等位替换成功的重组菌株)。4. Take the amplified product of step 3, denature at 95°C for 10 min and then ice bath for 5 min, and then perform sscp-PAGE. During electrophoresis, the amplified fragment of the recombinant plasmid pK18-YH66-RS07020 C251T (i.e., the amplified product of PCR amplification using the recombinant plasmid pK18-YH66-RS07020 C251T as a template and the primer pair consisting of primers P5 and P6) is used as a positive control, the amplified fragment of Corynebacterium glutamicum CGMCC21260 (i.e., the amplified product of PCR amplification using the primer pair consisting of primers P5 and P6) is used as a negative control, and water is used as a blank control. Due to different fragment structures and different electrophoresis positions, the strains whose electrophoresis positions are inconsistent with the negative control and consistent with the positive control are the target strains for screening (recombinant strains with successful allelic replacement).
5、根据步骤4的结果,将筛选得到的菌株的步骤3的扩增产物进行测序验证,得到重组菌YPV-013。与谷氨酸棒杆菌CGMCC21260相比,重组菌YPV-013的差异仅在于将谷氨酸棒杆菌CGMCC21260基因组中的序列表的序列4所示的YH66-RS07020基因取代为了序列表的序列2所示的YH66-RS07020C251T基因。序列2和序列4仅存在一个核苷酸差异,位于第251位。重组菌YPV-013即将谷氨酸棒杆菌CGMCC21260中的YH66-RS07020基因进行突变(单点突变)得到的工程菌株。5. According to the result of step 4, the amplified product of step 3 of the strain obtained by screening is sequenced and verified to obtain recombinant bacteria YPV-013. Compared with Corynebacterium glutamicum CGMCC21260, the difference of recombinant bacteria YPV-013 is only that the YH66-RS07020 gene shown in sequence 4 of the sequence table in the genome of Corynebacterium glutamicum CGMCC21260 is replaced by the YH66-RS07020 C251T gene shown in sequence 2 of the sequence table. There is only one nucleotide difference between sequence 2 and sequence 4, which is located at the 251st position. Recombinant bacteria YPV-013 is an engineering strain obtained by mutating the YH66-RS07020 gene in Corynebacterium glutamicum CGMCC21260 (single point mutation).
实施例2、构建重组菌YPV-015和重组菌YPV-014Example 2: Construction of recombinant bacteria YPV-015 and YPV-014
P7:5'-CAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGCATGACGGCTGACTGGACTC-3';P7: 5'- CAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAG CATGACGGCTGACTGGACTC-3';
P8:5'-TGAAATGTAAGATTCAAAGAAATCGGACTCCTTAAATGGG-3';P8: 5'-TGAAATGTAAGATTCAAAGAAATCGGACTCCTTAAATGGG-3';
P9:5'-CCCATTTAAGGAGTCCGATTTCTTTGAATCTTACATTTCA-3';P9: 5'-CCCATTTAAGGAGTCCGATTTCTTTGAATCTTACATTTCA-3';
P10:5'-TGGGTGGTAAATTTTTCCATGGAACTCACCGTCCTTACAG-3';P10: 5'-TGGGTGGTAAATTTTTCCATGGAACTCACCGTCCTTACAG-3';
P11:5'-CTGTAAGGACGGTGAGTTCCATGGAAAAATTTACCACCCA-3';P11: 5'-CTGTAAGGACGGTGAGTTCCATGGAAAAATTTACCACCCA-3';
P12:5'-CTATGTGAGTAGTCGATTTATTAAGCGTTAGTGCGTGGCT-3';P12: 5'-CTATGTGAGTAGTCGATTTATTAAGCGTTAGTGCGTGGCT-3';
P13:5'-AGCCACGCACTAACGCTTAATAAATCGACTACTCACATAG-3';P13: 5'-AGCCACGCACTAACGCTTAATAAATCGACTACTCACATAG-3';
P14:5'-CAGCTATGACCATGATTACGAATTCGAGCTCGGTACCCTGCATAAGAAACAACCACTT-3'。P14: 5'- CAGCTATGACCATGATTACGAATTCGAGCTCGGTACCC TGCATAAGAAACAACCACTT-3'.
P15:5'-GTCCGCTCTGTTGGTGTTCA-3';P15: 5'-GTCCGCTCTGTTGGTGTTCA-3';
P16:5'-AGAAGTTCGATGTCGGACTG-3'。P16: 5'-AGAAGTTCGATGTCGGACTG-3'.
P17:5'-CCAACGTGGACACCGACCAG-3';P17: 5'-CCAACGTGGACACCGACCAG-3';
P18:5'-TGGAGGAATATTCGGCCCAG-3'。P18: 5'-TGGAGGAATATTCGGCCCAG-3'.
一、构建重组菌YPV-0151. Construction of recombinant bacteria YPV-015
1、以重组菌YPV-013为模板,采用引物P7和引物P8组成的引物对进行PCR扩增,回收扩增产物(806bp)。1. Using the recombinant bacteria YPV-013 as a template, a primer pair consisting of primers P7 and P8 was used for PCR amplification, and the amplified product (806 bp) was recovered.
2、以重组菌YPV-013为模板,采用引物P9和引物P10组成的引物对进行PCR扩增,回收扩增产物(293bp)。2. Using the recombinant bacteria YPV-013 as a template, a primer pair consisting of primer P9 and primer P10 was used for PCR amplification, and the amplified product (293 bp) was recovered.
3、以重组菌YPV-013为模板,采用引物P11和引物P12组成的引物对进行PCR扩增,回收扩增产物(634bp)。3. Using the recombinant bacteria YPV-013 as a template, PCR amplification was performed using a primer pair consisting of primer P11 and primer P12, and the amplified product (634 bp) was recovered.
4、以重组菌YPV-013为模板,采用引物P13和引物P14组成的引物对进行PCR扩增,回收扩增产物(783bp)。4. Using the recombinant bacteria YPV-013 as a template, a primer pair consisting of primer P13 and primer P14 was used for PCR amplification, and the amplified product (783 bp) was recovered.
5、取pK18mobsacB质粒,采用限制性内切酶Xba I进行单酶切,回收线性化质粒。5. Take the pK18mobsacB plasmid, use the restriction endonuclease Xba I for single digestion, and recover the linearized plasmid.
6、将步骤1回收的扩增产物、步骤2回收的扩增产物、步骤3回收的扩增产物、步骤4回收的扩增产物与步骤5回收的线性化质粒共孵育(采用NEBuilder酶,50℃孵育30min),得到重组质粒015。经测序验证,重组质粒015中具有序列表的序列6所示的DNA分子。6. The amplified product recovered in step 1, the amplified product recovered in step 2, the amplified product recovered in step 3, the amplified product recovered in step 4 and the linearized plasmid recovered in step 5 were co-incubated (using NEBuilder enzyme, incubated at 50° C. for 30 min) to obtain recombinant plasmid 015. Sequencing verification showed that the recombinant plasmid 015 contained the DNA molecule shown in sequence 6 of the sequence table.
7、采用重组质粒015对谷氨酸棒杆菌CGMCC21260进行电击转化,然后培养,然后对各个单菌落分别进行PCR鉴定(采用引物P15和引物P16组成的引物对),能扩增出1454bp条带的菌株为阳性菌株。7. The recombinant plasmid 015 was used to electroporate the Corynebacterium glutamicum CGMCC21260, and then cultured. Then, each single colony was identified by PCR (using a primer pair consisting of primers P15 and P16). The strain that could amplify a 1454 bp band was a positive strain.
8、挑取步骤7中的阳性菌株,采用含15%蔗糖的培养基培养,然后挑取单菌落,分别采用含卡那霉素的培养基和不含卡那霉素的培养基进行培养,筛选在含卡那霉素的培养基上不能生长且在不含卡那霉素的培养基上可以生长的菌株。8. Pick the positive strain in step 7, culture it in a medium containing 15% sucrose, then pick a single colony, culture it in a medium containing kanamycin and a medium without kanamycin, and screen the strain that cannot grow on the medium containing kanamycin but can grow on the medium without kanamycin.
9、取步骤8筛选的菌株,采用引物P17和引物P18组成的引物对进行PCR扩增,扩增出1335bp条带的菌株为YH66-RS07020C251T基因整合到谷氨酸棒杆菌CGMCC21260基因组上的阳性菌株,将其命名为重组菌YPV-015。重组菌YPV-015为基因组上过表达YH66-RS07020C251T基因的工程菌株。9. Take the strain screened in step 8, use the primer pair consisting of primer P17 and primer P18 to perform PCR amplification, and the strain that amplifies the 1335bp band is a positive strain in which the YH66-RS07020 C251T gene is integrated into the genome of Corynebacterium glutamicum CGMCC21260, and it is named recombinant strain YPV-015. Recombinant strain YPV-015 is an engineered strain that overexpresses the YH66-RS07020 C251T gene on the genome.
二、构建重组菌YPV-0142. Construction of recombinant bacteria YPV-014
将模板均由“重组菌YPV-013”替换为“谷氨酸棒杆菌ATCC15168”,其他同步骤一。The templates were replaced by "recombinant bacteria YPV-013" with "Corynebacterium glutamicum ATCC15168", and the rest was the same as step 1.
得到YH66-RS07020基因整合到谷氨酸棒杆菌CGMCC21260基因组上的阳性菌株,将其命名为重组菌YPV-014。重组菌YPV-014为基因组上过表达YH66-RS07020基因的工程菌株。与重组菌YPV-015相比,重组菌YPV-014的差异仅在于:整合到谷氨酸棒杆菌CGMCC21260基因组的外源DNA的序列中,序列4取代了序列2。The positive strain in which the YH66-RS07020 gene was integrated into the genome of Corynebacterium glutamicum CGMCC21260 was obtained, and it was named as recombinant bacteria YPV-014. Recombinant bacteria YPV-014 is an engineered strain that overexpresses the YH66-RS07020 gene on the genome. Compared with recombinant bacteria YPV-015, the difference of recombinant bacteria YPV-014 is only that: in the sequence of the exogenous DNA integrated into the genome of Corynebacterium glutamicum CGMCC21260, sequence 4 replaces sequence 2.
实施例3、构建重组菌YPV-017和重组菌YPV-016Example 3: Construction of recombinant bacteria YPV-017 and YPV-016
一、构建重组菌YPV-0171. Construction of recombinant bacteria YPV-017
1、以重组菌YPV-013为模板,采用引物P19和引物P20组成的引物对进行PCR扩增,回收扩增产物(917bp)。经测序,扩增产物如序列表的序列7所示。1. Using the recombinant bacteria YPV-013 as a template, a primer pair consisting of primers P19 and P20 was used for PCR amplification, and the amplified product (917 bp) was recovered. After sequencing, the amplified product was shown in Sequence 7 of the sequence table.
P19:5'-GCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCTCTTTGAATCTTACATTTCA-3';P19: 5'-GCTTGCATGCCTGCAGGTCGACTCTAGAGGATCCCCTCTTTGAATCTTACATTTCA-3';
P20:5'-ATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACTTAAGCGTTAGTGCGTGGCT-3'。P20: 5'- ATCAGGCTGAAAATCTTCTCTCATCCGCCAAAAC TTAAGCGTTAGTGCGTGGCT-3'.
2、取pXMJ19质粒,采用限制性内切酶EcoR I酶切进行单酶切,回收线性化质粒。2. Take the pXMJ19 plasmid and perform single enzyme digestion with restriction endonuclease EcoR I to recover the linearized plasmid.
3、将步骤1回收的扩增产物与步骤2回收的线性化质粒共孵育(采用NEBuilder酶,50℃孵育30min),得到重组质粒pXMJ19-YH66-RS07020C251T。经测序验证,重组质粒pXMJ19-YH66-RS07020C251T中具有序列表的序列7所示的DNA分子。3. The amplified product recovered in step 1 was co-incubated with the linearized plasmid recovered in step 2 (using NEBuilder enzyme, incubated at 50°C for 30 min) to obtain the recombinant plasmid pXMJ19-YH66-RS07020 C251T . Sequencing verification showed that the recombinant plasmid pXMJ19-YH66-RS07020 C251T contained the DNA molecule shown in sequence 7 of the sequence table.
4、将重组质粒pXMJ19-YH66-RS07020C251T电转导入谷氨酸棒杆菌CGMCC21260,得到重组菌YPV-017。重组菌YPV-017为通过质粒过表达pXMJ19-YH66-RS07020C251T基因的工程菌株。4. The recombinant plasmid pXMJ19-YH66-RS07020 C251T was electrotransfected into Corynebacterium glutamicum CGMCC21260 to obtain the recombinant bacterium YPV-017. The recombinant bacterium YPV-017 is an engineered strain that overexpresses the pXMJ19-YH66-RS07020 C251T gene through a plasmid.
二、构建重组菌YPV-0162. Construction of recombinant bacteria YPV-016
将模板由“重组菌YPV-013”替换为“谷氨酸棒杆菌ATCC15168”,其他同步骤一。Replace the template from "recombinant bacteria YPV-013" to "Corynebacterium glutamicum ATCC15168", and the rest is the same as step 1.
得到重组菌YPV-016。重组菌YPV-016为通过质粒过表达YH66-RS07020基因的工程菌株。与重组菌YPV-017相比,重组菌YPV-016的差异仅在于:通过质粒过表达的外源DNA的序列中,序列4取代了序列2。The recombinant bacteria YPV-016 was obtained. The recombinant bacteria YPV-016 was an engineered strain that overexpressed the YH66-RS07020 gene through a plasmid. Compared with the recombinant bacteria YPV-017, the difference between the recombinant bacteria YPV-016 and the recombinant bacteria YPV-017 was that in the sequence of the exogenous DNA overexpressed through the plasmid, sequence 4 replaced sequence 2.
实施例4、构建基因组上缺失YH66-RS07020基因的工程菌株Example 4: Construction of an engineered strain with YH66-RS07020 gene deleted from the genome
P21:5'-CAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAGCGTGCCGGCATGATCGCCCC-3';P21: 5'- CAGTGCCAAGCTTGCATGCCTGCAGGTCGACTCTAG CGTGCCGGCATGATCGCCCC-3';
P22:5'-TTTCGCTATCAGACTGAAACTCTTTTTCTAGCCTTCCTTA-3';P22: 5'-TTTCGCTATCAGACTGAAACTCTTTTTTCTAGCCTTCCTTA-3';
P23:5'-TAAGGAAGGCTAGAAAAAGAGTTTCAGTCTGATAGCGAAA-3';P23: 5'-TAAGGAAGGCTAGAAAAAGAGTTTCAGTCTGATAGCGAAA-3';
P24:5'-CAGCTATGACCATGATTACGAATTCGAGCTCGGTACCCGTTGCCCTTCAAACCCACCG-3'。P24: 5'- CAGCTATGACCATGATTACGAATTCGAGCTCGGTACCC GTTGCCCTTCAAAACCACCG-3'.
P25:5'-CGTGCCGGCATGATCGCCCC-3';P25: 5'-CGTGCCGGCATGATCGCCCC-3';
P26:5'-GTTGCCCTTCAAACCCACCG-3'。P26: 5'-GTTGCCCTTCAAAACCACCG-3'.
一、构建重组质粒1. Construction of recombinant plasmid
1、以谷氨酸棒杆菌ATCC15168为模板,采用引物P21和引物P22组成的引物对进行PCR扩增,回收扩增产物(上游同源臂片段,787bp)。1. Using Corynebacterium glutamicum ATCC15168 as a template, a primer pair consisting of primer P21 and primer P22 was used for PCR amplification, and the amplified product (upstream homology arm fragment, 787 bp) was recovered.
2、以谷氨酸棒杆菌ATCC15168为模板,采用引物P23和引物P24组成的引物对进行PCR扩增,回收扩增产物(下游同源臂片段,773bp)。2. Using Corynebacterium glutamicum ATCC15168 as a template, a primer pair consisting of primer P23 and primer P24 was used for PCR amplification, and the amplified product (downstream homology arm fragment, 773 bp) was recovered.
3、同时将步骤1回收的扩增产物和步骤2回收的扩增产物作为模板,采用引物P21和引物P24组成的引物对进行PCR扩增(Overlap PCR),回收扩增产物(1520bp)。经测序,扩增产物如序列表的序列8所示。3. The amplified product recovered in step 1 and the amplified product recovered in step 2 were used as templates to perform PCR amplification (Overlap PCR) using a primer pair consisting of primers P21 and P24, and the amplified product (1520 bp) was recovered. The amplified product was sequenced as shown in Sequence 8 of the sequence table.
4、取pK18mobsacB质粒,采用限制性内切酶Xba I进行单酶切,回收线性化质粒。4. Take the pK18mobsacB plasmid, use the restriction endonuclease Xba I for single digestion, and recover the linearized plasmid.
5、将步骤3回收的扩增产物与步骤4回收的线性化质粒共孵育(采用NEBuilder酶,50℃孵育30min),得到重组质粒pK18-ΔYH66-RS07020。经测序验证,重组质粒pK18-ΔYH66-RS07020中具有序列表的序列8所示的DNA分子。5. The amplified product recovered in step 3 was co-incubated with the linearized plasmid recovered in step 4 (using NEBuilder enzyme, incubated at 50°C for 30 min) to obtain the recombinant plasmid pK18-ΔYH66-RS07020. The recombinant plasmid pK18-ΔYH66-RS07020 was sequenced and verified to have the DNA molecule shown in sequence 8 of the sequence table.
二、构建重组菌YPV-0182. Construction of recombinant bacteria YPV-018
1、采用重组质粒pK18-ΔYH66-RS07020对谷氨酸棒杆菌CGMCC21260进行电击转化,然后培养,然后对各个单菌落分别进行PCR鉴定(采用引物P25和P26组成的引物对)。能同时扩增出1446bp及2040bp条带的菌株为阳性菌株。只扩增出2040bp条带的菌株为转化失败的出发菌,其中的2040bp片段如序列表的序列9所示。1. The recombinant plasmid pK18-ΔYH66-RS07020 was used to electroshock transform Corynebacterium glutamicum CGMCC21260, and then cultured, and then PCR identification was performed on each single colony (primer pair composed of primers P25 and P26). The strain that can amplify 1446bp and 2040bp bands at the same time is a positive strain. The strain that only amplifies the 2040bp band is a starting strain that failed to transform, and the 2040bp fragment is shown in Sequence 9 of the sequence table.
2、挑取步骤1中的阳性菌株,采用含15%蔗糖的培养基培养,然后挑取单菌落,分别采用含卡那霉素的培养基和不含卡那霉素的培养基进行培养,筛选在含卡那霉素的培养基上不能生长且在不含卡那霉素的培养基上可以生长的菌株。2. Pick the positive strain in step 1, culture it in a medium containing 15% sucrose, then pick a single colony, culture it in a medium containing kanamycin and a medium without kanamycin, and screen the strain that cannot grow on the medium containing kanamycin but can grow on the medium without kanamycin.
3、取步骤2筛选的菌株,采用引物P25和引物P26组成的引物对进行PCR扩增,扩增产物仅为一种且为1446bp的菌株为YH66-RS07020基因编码区被敲除的阳性菌株。3. Take the strain screened in step 2 and use the primer pair consisting of primer P25 and primer P26 for PCR amplification. The strain with only one amplification product of 1446 bp is a positive strain in which the YH66-RS07020 gene coding region is knocked out.
4、将步骤3筛选得到的菌株,再次采用引物P25和引物P26组成的引物对进行PCR扩增并测序,将测序正确的菌株命名为重组菌YPV-018。与谷氨酸棒杆菌CGMCC21260的基因组DNA相比,重组菌YPV-018的差异仅在于缺失了序列表的序列4所示的DNA分子。4. The strain screened in step 3 was again amplified by PCR using a primer pair consisting of primers P25 and P26 and sequenced, and the strain with correct sequencing was named recombinant bacteria YPV-018. Compared with the genomic DNA of Corynebacterium glutamicum CGMCC21260, the difference of recombinant bacteria YPV-018 was only the lack of the DNA molecule shown in sequence 4 of the sequence table.
实施例5、发酵制备L-缬氨酸Example 5: Fermentation to prepare L-valine
供试菌株分别为:谷氨酸棒杆菌CGMCC21260、重组菌YPV-013、重组菌YPV-014、重组菌YPV-015、重组菌YPV-016、重组菌YPV-017和重组菌YPV-018。The test strains were: Corynebacterium glutamicum CGMCC21260, recombinant bacteria YPV-013, recombinant bacteria YPV-014, recombinant bacteria YPV-015, recombinant bacteria YPV-016, recombinant bacteria YPV-017 and recombinant bacteria YPV-018.
发酵罐:BLBIO-5GC-4-H型号的发酵罐(上海百仑生物科技有限公司)。Fermentation tank: BLBIO-5GC-4-H fermentation tank (Shanghai Bailun Biotechnology Co., Ltd.).
发酵培养基的配方见表3,余量为水。The formula of the fermentation medium is shown in Table 3, with the remainder being water.
表3发酵培养基配方Table 3 Fermentation medium formula
发酵控制工艺见表4。The fermentation control process is shown in Table 4.
完成接种的初始时刻,体系OD值为0.3-0.5。At the initial moment of inoculation, the OD value of the system was 0.3-0.5.
发酵过程中:用于调pH的为氨水;发酵体系中有泡沫时,加入适量消泡剂antifoam(CB-442);通过补加70%葡萄糖水溶液控制体系含糖量(残糖)。During the fermentation process: ammonia water is used to adjust the pH; when there is foam in the fermentation system, an appropriate amount of antifoam (CB-442) is added; the sugar content (residual sugar) of the system is controlled by adding 70% glucose aqueous solution.
表4发酵控制工艺Table 4 Fermentation control process
完成发酵后,收集上清,采用HPLC检测上清中的L-缬氨酸产量。After the fermentation is completed, the supernatant is collected and the L-valine yield in the supernatant is detected by HPLC.
结果见表5。重组菌YPV-013和重组菌YPV-018的L-缬氨酸产量显著高于谷氨酸棒杆菌CGMCC21260。结果表明,抑制YH66-RS07020基因表达可以提高L-缬氨酸产量,过表达YH66-RS07020基因降低L-缬氨酸产量。The results are shown in Table 5. The L-valine production of the recombinant bacteria YPV-013 and the recombinant bacteria YPV-018 was significantly higher than that of Corynebacterium glutamicum CGMCC21260. The results showed that inhibiting the expression of the YH66-RS07020 gene could increase the L-valine production, while overexpressing the YH66-RS07020 gene reduced the L-valine production.
表5 L-缬氨酸发酵实验结果Table 5 L-valine fermentation experimental results
以上对本发明进行了详述。对于本领域技术人员来说,在不脱离本发明的宗旨和范围,以及无需进行不必要的实验情况下,可在等同参数、浓度和条件下,在较宽范围内实施本发明。虽然本发明给出了特殊的实施例,应该理解为,可以对本发明作进一步的改进。总之,按本发明的原理,本申请欲包括任何变更、用途或对本发明的改进,包括脱离了本申请中已公开范围,而用本领域已知的常规技术进行的改变。按以下附带的权利要求的范围,可以进行一些基本特征的应用。The present invention has been described in detail above. It will be apparent to those skilled in the art that the present invention may be implemented in a wide range under equivalent parameters, concentrations and conditions without departing from the spirit and scope of the present invention and without the need for unnecessary experimentation. Although the present invention provides specific embodiments, it should be understood that further improvements may be made to the present invention. In short, according to the principles of the present invention, this application is intended to include any changes, uses or improvements to the present invention, including changes made by conventional techniques known in the art that depart from the scope disclosed in this application. Applications of some of the basic features may be made within the scope of the following appended claims.
序列表Sequence Listing
<110> 黑龙江伊品生物科技有限公司<110> Heilongjiang Yipin Biotechnology Co., Ltd.
<120> YH66-RS07020基因改造得到的工程菌及其在制备缬氨酸中的应用<120> Engineered bacteria obtained by genetic modification of YH66-RS07020 and its application in the preparation of valine
<130> GNCYX211994<130> GNCYX211994
<160> 9<160> 9
<170> SIPOSequenceListing 1.0<170> SIPOSequenceListing 1.0
<210> 1<210> 1
<211> 197<211> 197
<212> PRT<212> PRT
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 1<400> 1
Met Glu Lys Phe Thr Thr His Thr Gly Val Gly Val Pro Leu Gln ArgMet Glu Lys Phe Thr Thr His Thr Gly Val Gly Val Pro Leu Gln Arg
1 5 10 151 5 10 15
Ser Asn Val Asp Thr Asp Gln Ile Ile Pro Ala Val Tyr Leu Lys ArgSer Asn Val Asp Thr Asp Gln Ile Ile Pro Ala Val Tyr Leu Lys Arg
20 25 3020 25 30
Val Thr Arg Thr Gly Phe Glu Asp Gly Leu Phe Ser Asn Trp Arg GlnVal Thr Arg Thr Gly Phe Glu Asp Gly Leu Phe Ser Asn Trp Arg Gln
35 40 4535 40 45
Asn Asp Pro Asn Phe Val Leu Asn Thr Asp Thr Tyr Lys Asn Gly SerAsn Asp Pro Asn Phe Val Leu Asn Thr Asp Thr Tyr Lys Asn Gly Ser
50 55 6050 55 60
Val Leu Val Ala Gly Pro Asp Phe Gly Thr Gly Ser Ser Arg Glu HisVal Leu Val Ala Gly Pro Asp Phe Gly Thr Gly Ser Ser Arg Glu His
65 70 75 8065 70 75 80
Ala Val Trp Val Leu Met Asp Tyr Gly Phe Arg Ala Val Phe Ser SerAla Val Trp Val Leu Met Asp Tyr Gly Phe Arg Ala Val Phe Ser Ser
85 90 9585 90 95
Arg Phe Ala Asp Ile Phe Arg Gly Asn Ser Gly Lys Ala Gly Met LeuArg Phe Ala Asp Ile Phe Arg Gly Asn Ser Gly Lys Ala Gly Met Leu
100 105 110100 105 110
Ala Gly Ile Met Glu Gln Ser Asp Ile Glu Leu Leu Trp Lys Leu MetAla Gly Ile Met Glu Gln Ser Asp Ile Glu Leu Leu Trp Lys Leu Met
115 120 125115 120 125
Glu Gln Thr Pro Gly Leu Glu Leu Thr Val Asn Leu Glu Lys Gln IleGlu Gln Thr Pro Gly Leu Glu Leu Thr Val Asn Leu Glu Lys Gln Ile
130 135 140130 135 140
Val Thr Ala Gly Asp Val Val Ile Ser Phe Glu Val Asp Pro Tyr IleVal Thr Ala Gly Asp Val Val Ile Ser Phe Glu Val Asp Pro Tyr Ile
145 150 155 160145 150 155 160
Arg Trp Arg Leu Met Glu Gly Leu Asp Asp Ala Gly Leu Thr Leu ArgArg Trp Arg Leu Met Glu Gly Leu Asp Asp Ala Gly Leu Thr Leu Arg
165 170 175165 170 175
Lys Leu Asp Glu Ile Glu Asp Tyr Glu Ala Lys Arg Pro Ala Phe LysLys Leu Asp Glu Ile Glu Asp Tyr Glu Ala Lys Arg Pro Ala Phe Lys
180 185 190180 185 190
Pro Arg Thr Asn AlaPro Arg Thr Asn Ala
195195
<210> 2<210> 2
<211> 594<211> 594
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 2<400> 2
atggaaaaat ttaccaccca caccggcgtt ggcgttccac tgcagcgatc caacgtggac 60atggaaaaat ttaccaccca caccggcgtt ggcgttccac tgcagcgatc caacgtggac 60
accgaccaga tcatccccgc cgtctacctc aagcgcgtca cccgcacagg cttcgaagac 120accgaccaga tcatccccgc cgtctacctc aagcgcgtca cccgcacagg cttcgaagac 120
ggactgtttt ccaactggcg ccaaaacgac cccaactttg tcctcaacac cgacacctac 180ggactgtttt ccaactggcg ccaaaacgac cccaactttg tcctcaacac cgacacctac 180
aagaacggct ccgttctcgt agcaggccct gactttggca ccggctcctc ccgcgagcac 240aagaacggct ccgttctcgt agcaggccct gactttggca ccggctcctc ccgcgagcac 240
gccgtctggg tactcatgga ctacggcttc cgcgctgtct tctcctcacg attcgccgac 300gccgtctggg tactcatgga ctacggcttc cgcgctgtct tctcctcacg attcgccgac 300
atcttccgcg gcaactccgg aaaagctggc atgctcgccg gcatcatgga acagtccgac 360atcttccgcg gcaactccgg aaaagctggc atgctcgccg gcatcatgga acagtccgac 360
atcgaacttc tgtggaagct catggaacaa accccgggcc tcgaactgac cgtgaacctg 420atcgaacttc tgtggaagct catggaacaa accccgggcc tcgaactgac cgtgaacctg 420
gaaaagcaga tcgtcactgc aggcgacgta gtgatcagct tcgaagttga cccttacatt 480gaaaagcaga tcgtcactgc aggcgacgta gtgatcagct tcgaagttga cccttacatt 480
cgctggcgtt tgatggaagg cctcgacgac gctggcctga ccctgcgcaa gctcgatgaa 540cgctggcgtt tgatggaagg cctcgacgac gctggcctga ccctgcgcaa gctcgatgaa 540
attgaagact acgaggctaa gcgccctgcg tttaagccac gcactaacgc ttaa 594attgaagact acgaggctaa gcgccctgcg tttaagccac gcactaacgc ttaa 594
<210> 3<210> 3
<211> 197<211> 197
<212> PRT<212> PRT
<213> Corynebacterium glutamicum<213> Corynebacterium glutamicum
<400> 3<400> 3
Met Glu Lys Phe Thr Thr His Thr Gly Val Gly Val Pro Leu Gln ArgMet Glu Lys Phe Thr Thr His Thr Gly Val Gly Val Pro Leu Gln Arg
1 5 10 151 5 10 15
Ser Asn Val Asp Thr Asp Gln Ile Ile Pro Ala Val Tyr Leu Lys ArgSer Asn Val Asp Thr Asp Gln Ile Ile Pro Ala Val Tyr Leu Lys Arg
20 25 3020 25 30
Val Thr Arg Thr Gly Phe Glu Asp Gly Leu Phe Ser Asn Trp Arg GlnVal Thr Arg Thr Gly Phe Glu Asp Gly Leu Phe Ser Asn Trp Arg Gln
35 40 4535 40 45
Asn Asp Pro Asn Phe Val Leu Asn Thr Asp Thr Tyr Lys Asn Gly SerAsn Asp Pro Asn Phe Val Leu Asn Thr Asp Thr Tyr Lys Asn Gly Ser
50 55 6050 55 60
Val Leu Val Ala Gly Pro Asp Phe Gly Thr Gly Ser Ser Arg Glu HisVal Leu Val Ala Gly Pro Asp Phe Gly Thr Gly Ser Ser Arg Glu His
65 70 75 8065 70 75 80
Ala Val Trp Ala Leu Met Asp Tyr Gly Phe Arg Ala Val Phe Ser SerAla Val Trp Ala Leu Met Asp Tyr Gly Phe Arg Ala Val Phe Ser Ser
85 90 9585 90 95
Arg Phe Ala Asp Ile Phe Arg Gly Asn Ser Gly Lys Ala Gly Met LeuArg Phe Ala Asp Ile Phe Arg Gly Asn Ser Gly Lys Ala Gly Met Leu
100 105 110100 105 110
Ala Gly Ile Met Glu Gln Ser Asp Ile Glu Leu Leu Trp Lys Leu MetAla Gly Ile Met Glu Gln Ser Asp Ile Glu Leu Leu Trp Lys Leu Met
115 120 125115 120 125
Glu Gln Thr Pro Gly Leu Glu Leu Thr Val Asn Leu Glu Lys Gln IleGlu Gln Thr Pro Gly Leu Glu Leu Thr Val Asn Leu Glu Lys Gln Ile
130 135 140130 135 140
Val Thr Ala Gly Asp Val Val Ile Ser Phe Glu Val Asp Pro Tyr IleVal Thr Ala Gly Asp Val Val Ile Ser Phe Glu Val Asp Pro Tyr Ile
145 150 155 160145 150 155 160
Arg Trp Arg Leu Met Glu Gly Leu Asp Asp Ala Gly Leu Thr Leu ArgArg Trp Arg Leu Met Glu Gly Leu Asp Asp Ala Gly Leu Thr Leu Arg
165 170 175165 170 175
Lys Leu Asp Glu Ile Glu Asp Tyr Glu Ala Lys Arg Pro Ala Phe LysLys Leu Asp Glu Ile Glu Asp Tyr Glu Ala Lys Arg Pro Ala Phe Lys
180 185 190180 185 190
Pro Arg Thr Asn AlaPro Arg Thr Asn Ala
195195
<210> 4<210> 4
<211> 594<211> 594
<212> DNA<212> DNA
<213> Corynebacterium glutamicum<213> Corynebacterium glutamicum
<400> 4<400> 4
atggaaaaat ttaccaccca caccggcgtt ggcgttccac tgcagcgatc caacgtggac 60atggaaaaat ttaccaccca caccggcgtt ggcgttccac tgcagcgatc caacgtggac 60
accgaccaga tcatccccgc cgtctacctc aagcgcgtca cccgcacagg cttcgaagac 120accgaccaga tcatccccgc cgtctacctc aagcgcgtca cccgcacagg cttcgaagac 120
ggactgtttt ccaactggcg ccaaaacgac cccaactttg tcctcaacac cgacacctac 180ggactgtttt ccaactggcg ccaaaacgac cccaactttg tcctcaacac cgacacctac 180
aagaacggct ccgttctcgt agcaggccct gactttggca ccggctcctc ccgcgagcac 240aagaacggct ccgttctcgt agcaggccct gactttggca ccggctcctc ccgcgagcac 240
gccgtctggg cactcatgga ctacggcttc cgcgctgtct tctcctcacg attcgccgac 300gccgtctggg cactcatgga ctacggcttc cgcgctgtct tctcctcacg attcgccgac 300
atcttccgcg gcaactccgg aaaagctggc atgctcgccg gcatcatgga acagtccgac 360atcttccgcg gcaactccgg aaaagctggc atgctcgccg gcatcatgga acagtccgac 360
atcgaacttc tgtggaagct catggaacaa accccgggcc tcgaactgac cgtgaacctg 420atcgaacttc tgtggaagct catggaacaa accccgggcc tcgaactgac cgtgaacctg 420
gaaaagcaga tcgtcactgc aggcgacgta gtgatcagct tcgaagttga cccttacatt 480gaaaagcaga tcgtcactgc aggcgacgta gtgatcagct tcgaagttga cccttacatt 480
cgctggcgtt tgatggaagg cctcgacgac gctggcctga ccctgcgcaa gctcgatgaa 540cgctggcgtt tgatggaagg cctcgacgac gctggcctga ccctgcgcaa gctcgatgaa 540
attgaagact acgaggctaa gcgccctgcg tttaagccac gcactaacgc ttaa 594attgaagact acgaggctaa gcgccctgcg tttaagccac gcactaacgc ttaa 594
<210> 5<210> 5
<211> 1314<211> 1314
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 5<400> 5
cagtgccaag cttgcatgcc tgcaggtcga ctctagaacg cccgcatcga agacctgcag 60cagtgccaag cttgcatgcc tgcaggtcga ctctagaacg cccgcatcga agacctgcag 60
atcgccgctg acatcctcaa gggccacaaa atcgccgacg gcatgcgcat gatggtcgtg 120atcgccgctg acatcctcaa gggccacaaa atcgccgacg gcatgcgcat gatggtcgtg 120
ccttcctcca cctggatcaa gcaagaggcc gaagcactcg gactggacaa aatcttcacc 180ccttcctcca cctggatcaa gcaagaggcc gaagcactcg gactggacaa aatcttcacc 180
gacgctggcg ctgaatggcg taccgcaggc tgctccatgt gcctgggcat gaacccagac 240gacgctggcg ctgaatggcg taccgcaggc tgctccatgt gcctgggcat gaacccagac 240
caactgaagc caggcgagcg ctctgcatcc acctccaacc gaaacttcga aggacgccaa 300caactgaagc caggcgagcg ctctgcatcc acctccaacc gaaacttcga aggacgccaa 300
ggaccaggag gccgcaccca cctggtatcc ccagcagtcg cagccgccac cgcaatccgc 360ggaccaggag gccgcaccca cctggtatcc ccagcagtcg cagccgccac cgcaatccgc 360
ggcaccctgt cctcacctgc agatatctaa ggaaggctag aaaaagaatg gaaaaattta 420ggcaccctgt cctcacctgc agatatctaa ggaaggctag aaaaagaatg gaaaaattta 420
ccacccacac cggcgttggc gttccactgc agcgatccaa cgtggacacc gaccagatca 480ccacccacac cggcgttggc gttccactgc agcgatccaa cgtggacacc gaccagatca 480
tccccgccgt ctacctcaag cgcgtcaccc gcacaggctt cgaagacgga ctgttttcca 540tccccgccgt ctacctcaag cgcgtcaccc gcacaggctt cgaagacgga ctgttttcca 540
actggcgcca aaacgacccc aactttgtcc tcaacaccga cacctacaag aacggctccg 600actggcgcca aaacgacccc aactttgtcc tcaacaccga cacctacaag aacggctccg 600
ttctcgtagc aggccctgac tttggcaccg gctcctcccg cgagcacgcc gtctgggtac 660ttctcgtagc aggccctgac tttggcaccg gctcctcccg cgagcacgcc gtctgggtac 660
tcatggacta cggcttccgc gctgtcttct cctcacgatt cgccgacatc ttccgcggca 720tcatggacta cggcttccgc gctgtcttct cctcacgatt cgccgacatc ttccgcggca 720
actccggaaa agctggcatg ctcgccggca tcatggaaca gtccgacatc gaacttctgt 780actccggaaa agctggcatg ctcgccggca tcatggaaca gtccgacatc gaacttctgt 780
ggaagctcat ggaacaaacc ccgggcctcg aactgaccgt gaacctggaa aagcagatcg 840ggaagctcat ggaacaaacc ccgggcctcg aactgaccgt gaacctggaa aagcagatcg 840
tcactgcagg cgacgtagtg atcagcttcg aagttgaccc ttacattcgc tggcgtttga 900tcactgcagg cgacgtagtg atcagcttcg aagttgaccc ttacattcgc tggcgtttga 900
tggaaggcct cgacgacgct ggcctgaccc tgcgcaagct cgatgaaatt gaagactacg 960tggaaggcct cgacgacgct ggcctgaccc tgcgcaagct cgatgaaatt gaagactacg 960
aggctaagcg ccctgcgttt aagccacgca ctaacgctta agtttcagtc tgatagcgaa 1020aggctaagcg ccctgcgttt aagccacgca ctaacgctta agtttcagtc tgatagcgaa 1020
agcaccccgc aaccttcatt gtcgcggggt gcatttgtgc gtcttggtgg gcgagtggag 1080agcaccccgc aaccttcatt gtcgcggggt gcatttgtgc gtcttggtgg gcgagtggag 1080
tgggcatgtc tggaatagac caagaggccc tggattccct taaggtcttg gtctttttcg 1140tgggcatgtc tggaatagac caagaggccc tggattccct taaggtcttg gtctttttcg 1140
tacgttttga ggcctgggaa gtgcatatcc agaccaaggg accccggcaa gccaagaccc 1200tacgttttga ggcctgggaa gtgcatatcc agaccaaggg accccggcaa gccaagaccc 1200
ttggtttaat atgacgttcc gccccgagca agccgaaacc attacctaga acgcatgaaa 1260ttggtttaat atgacgttcc gccccgagca agccgaaacc attacctaga acgcatgaaa 1260
agtgcccctc taggatgggt accgagctcg aattcgtaat catggtcata gctg 1314agtgcccctc taggatgggt accgagctcg aattcgtaat catggtcata gctg 1314
<210> 6<210> 6
<211> 2396<211> 2396
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 6<400> 6
cagtgccaag cttgcatgcc tgcaggtcga ctctagcatg acggctgact ggactcgact 60cagtgccaag cttgcatgcc tgcaggtcga ctctagcatg acggctgact ggactcgact 60
tccatacgag gttctggaga agatctccac ccgcatcacc aacgaagttc cagatgtgaa 120tccatacgag gttctggaga agatctccac ccgcatcacc aacgaagttc cagatgtgaa 120
ccgcgtggtt ttggacgtaa cctccaagcc accaggaacc atcgaatggg agtaggcctt 180ccgcgtggtt ttggacgtaa cctccaagcc accaggaacc atcgaatggg agtaggcctt 180
aaatgagcct tcgttaagcg gcaatcacct tattggagat tgtcgctttt cccatttctc 240aaatgagcct tcgttaagcg gcaatcacct tattggagat tgtcgctttt cccatttctc 240
cgggttttct ggaacttttt gggcgtatgc tgggaatgat tctattattg ccaaatcaga 300cgggttttct ggaacttttt gggcgtatgc tgggaatgat tctattattg ccaaatcaga 300
aagcaggaga gacccgatga gcgaaatcct agaaacctat tgggcacccc actttggaaa 360aagcaggaga gacccgatga gcgaaatcct agaaacctat tgggcacccc actttggaaa 360
aaccgaagaa gccacagcac tcgtttcata cctggcacaa gcttccggcg atcccattga 420aaccgaagaa gccacagcac tcgtttcata cctggcacaa gcttccggcg atcccattga 420
ggttcacacc ctgttcgggg atttaggttt agacggactc tcgggaaact acaccgacac 480ggttcacacc ctgttcgggg atttaggttt agacggactc tcgggaaact acaccgacac 480
tgagattgac ggctacggcg acgcattcct gctggttgca gcgctatccg tgttgatggc 540tgagattgac ggctacggcg acgcattcct gctggttgca gcgctatccg tgttgatggc 540
tgaaaacaaa gcaacaggtg gcgtgaatct gggtgagctt gggggagctg ataaatcgat 600tgaaaacaaa gcaacaggtg gcgtgaatct gggtgagctt gggggagctg ataaatcgat 600
ccggctgcat gttgaatcca aggagaacac ccaaatcaac accgcattga agtattttgc 660ccggctgcat gttgaatcca aggagaacac ccaaatcaac accgcattga agtattttgc 660
gctctcccca gaagaccacg cagcagcaga tcgcttcgat gaggatgacc tgtctgagct 720gctctcccca gaagaccacg cagcagcaga tcgcttcgat gaggatgacc tgtctgagct 720
tgccaacttg agtgaagagc tgcgcggaca gctggactaa ttgtctccca tttaaggagt 780tgccaacttg agtgaagagc tgcgcggaca gctggactaa ttgtctccca tttaaggagt 780
ccgatttctt tgaatcttac atttcataga gtgagacgct tgcaggttgg ggtttaaacg 840ccgatttctt tgaatcttac atttcataga gtgagacgct tgcaggttgg ggtttaaacg 840
ttgtggatat cgattccctg caggggagct gtataaagtg tgaggtaaat ctaaaacgca 900ttgtggatat cgattccctg caggggagct gtataaagtg tgaggtaaat ctaaaacgca 900
ggacgtgaca tttttggcgc gttttaggtt atactgtctc agacaacgaa actcttgtcc 960ggacgtgaca tttttggcgc gttttaggtt atactgtctc agacaacgaa actcttgtcc 960
cacattgtga gatttgcttg ctagaatgtg ggctagaaat tcctgaaaat ttttacgcac 1020cacattgtga gatttgcttg ctagaatgtg ggctagaaat tcctgaaaat ttttacgcac 1020
tgtaaggacg gtgagttcca tggaaaaatt taccacccac accggcgttg gcgttccact 1080tgtaaggacg gtgagttcca tggaaaaatt taccacccac accggcgttg gcgttccact 1080
gcagcgatcc aacgtggaca ccgaccagat catccccgcc gtctacctca agcgcgtcac 1140gcagcgatcc aacgtggaca ccgaccagat catccccgcc gtctacctca agcgcgtcac 1140
ccgcacaggc ttcgaagacg gactgttttc caactggcgc caaaacgacc ccaactttgt 1200ccgcacaggc ttcgaagacg gactgttttc caactggcgc caaaacgacc ccaactttgt 1200
cctcaacacc gacacctaca agaacggctc cgttctcgta gcaggccctg actttggcac 1260cctcaacacc gacacctaca agaacggctc cgttctcgta gcaggccctg actttggcac 1260
cggctcctcc cgcgagcacg ccgtctgggt actcatggac tacggcttcc gcgctgtctt 1320cggctcctcc cgcgagcacg ccgtctgggt actcatggac tacggcttcc gcgctgtctt 1320
ctcctcacga ttcgccgaca tcttccgcgg caactccgga aaagctggca tgctcgccgg 1380ctcctcacga ttcgccgaca tcttccgcgg caactccgga aaagctggca tgctcgccgg 1380
catcatggaa cagtccgaca tcgaacttct gtggaagctc atggaacaaa ccccgggcct 1440catcatggaa cagtccgaca tcgaacttct gtggaagctc atggaacaaa ccccgggcct 1440
cgaactgacc gtgaacctgg aaaagcagat cgtcactgca ggcgacgtag tgatcagctt 1500cgaactgacc gtgaacctgg aaaagcagat cgtcactgca ggcgacgtag tgatcagctt 1500
cgaagttgac ccttacattc gctggcgttt gatggaaggc ctcgacgacg ctggcctgac 1560cgaagttgac ccttacattc gctggcgttt gatggaaggc ctcgacgacg ctggcctgac 1560
cctgcgcaag ctcgatgaaa ttgaagacta cgaggctaag cgccctgcgt ttaagccacg 1620cctgcgcaag ctcgatgaaa ttgaagacta cgaggctaag cgccctgcgt ttaagccacg 1620
cactaacgct taataaatcg actactcaca tagggtcggg ctagtcattc tgatcagcga 1680cactaacgct taataaatcg actactcaca tagggtcggg ctagtcattc tgatcagcga 1680
attccacgtt cacatcgcca attccagagt tcacaaccag attcagcatt ggaccttcta 1740attccacgtt cacatcgcca attccagagt tcacaaccag attcagcatt ggaccttcta 1740
gatcagcatt gtgggcggtg agatctccaa catcacagcg cgctgtgccc acaccggcgg 1800gatcagcatt gtgggcggtg agatctccaa catcacagcg cgctgtgccc acaccggcgg 1800
tacaacttag gctcacgggc acatcatcgg gcagggtgac catgacttcg ccgatccctg 1860tacaacttag gctcacgggc acatcatcgg gcagggtgac catgacttcg ccgatccctg 1860
aggtgatttg gatgttttgt tcctgatcca attgggtgag gtggctgaaa tcgaggttca 1920aggtgatttg gatgttttgt tcctgatcca attgggtgag gtggctgaaa tcgaggttca 1920
tttcacccac gccagaggtg tagctgctga ggagttcatc gttggtgggg atgagattga 1980tttcacccac gccagaggtg tagctgctga ggagttcatc gttggtgggg atgagattga 1980
catcgccgat tccagggtcg tcttcaaagt agatgggatc gatatttgaa ataaacaggc 2040catcgccgat tccagggtcg tcttcaaagt agatggggatc gatatttgaa ataaacaggc 2040
ctgcgagggc gctcatgaca actccggtac caactacacc gccgacaatc catggccaca 2100ctgcgagggc gctcatgaca actccggtac caactacacc gccgacaatc catggccaca 2100
catggcgctt tttctgaggc ttttgtggag ggacttgtac atcccaggtg ttgtattggt 2160catggcgctttttctgaggc ttttgtggag ggacttgtac atcccaggtg ttgtattggt 2160
tttgggcaag tggatcccaa tgaggcgctt cgggggtttg ttgcgcgaag ggtgcatagt 2220tttgggcaag tggatcccaa tgaggcgctt cgggggtttg ttgcgcgaag ggtgcatagt 2220
agccctcaac gggggtgata gtgcttagat ctggttgggg ttgtgggtag agatcttcgt 2280agccctcaac gggggtgata gtgcttagat ctggttgggg ttgtgggtag agatcttcgt 2280
ttttcatggt ggcatcctca gaaacagtga attcagtggt gagtagtccg cggggtggaa 2340ttttcatggt ggcatcctca gaaacagtga attcagtggt gagtagtccg cggggtggaa 2340
gtggttgttt cttatgcagg gtaccgagct cgaattcgta atcatggtca tagctg 2396gtggttgttt cttatgcagg gtaccgagct cgaattcgta atcatggtca tagctg 2396
<210> 7<210> 7
<211> 917<211> 917
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 7<400> 7
gcttgcatgc ctgcaggtcg actctagagg atcccctctt tgaatcttac atttcataga 60gcttgcatgc ctgcaggtcg actctagagg atcccctctt tgaatcttac atttcataga 60
gtgagacgct tgcaggttgg ggtttaaacg ttgtggatat cgattccctg caggggagct 120gtgagacgct tgcaggttgg ggtttaaacg ttgtggatat cgattccctg caggggagct 120
gtataaagtg tgaggtaaat ctaaaacgca ggacgtgaca tttttggcgc gttttaggtt 180gtataaagtg tgaggtaaat ctaaaacgca ggacgtgaca tttttggcgc gttttaggtt 180
atactgtctc agacaacgaa actcttgtcc cacattgtga gatttgcttg ctagaatgtg 240atactgtctc agacaacgaa actcttgtcc cacattgtga gatttgcttg ctagaatgtg 240
ggctagaaat tcctgaaaat ttttacgcac tgtaaggacg gtgagttcca tggaaaaatt 300ggctagaaat tcctgaaaat ttttacgcac tgtaaggacg gtgagttcca tggaaaaatt 300
taccacccac accggcgttg gcgttccact gcagcgatcc aacgtggaca ccgaccagat 360taccacccac accggcgttg gcgttccact gcagcgatcc aacgtggaca ccgaccagat 360
catccccgcc gtctacctca agcgcgtcac ccgcacaggc ttcgaagacg gactgttttc 420catccccgcc gtctacctca agcgcgtcac ccgcacaggc ttcgaagacg gactgttttc 420
caactggcgc caaaacgacc ccaactttgt cctcaacacc gacacctaca agaacggctc 480caactggcgc caaaacgacc ccaactttgt cctcaacacc gacacctaca agaacggctc 480
cgttctcgta gcaggccctg actttggcac cggctcctcc cgcgagcacg ccgtctgggt 540cgttctcgta gcaggccctg actttggcac cggctcctcc cgcgagcacg ccgtctgggt 540
actcatggac tacggcttcc gcgctgtctt ctcctcacga ttcgccgaca tcttccgcgg 600actcatggac tacggcttcc gcgctgtctt ctcctcacga ttcgccgaca tcttccgcgg 600
caactccgga aaagctggca tgctcgccgg catcatggaa cagtccgaca tcgaacttct 660caactccgga aaagctggca tgctcgccgg catcatggaa cagtccgaca tcgaacttct 660
gtggaagctc atggaacaaa ccccgggcct cgaactgacc gtgaacctgg aaaagcagat 720gtggaagctc atggaacaaa ccccgggcct cgaactgacc gtgaacctgg aaaagcagat 720
cgtcactgca ggcgacgtag tgatcagctt cgaagttgac ccttacattc gctggcgttt 780cgtcactgca ggcgacgtag tgatcagctt cgaagttgac ccttacattc gctggcgttt 780
gatggaaggc ctcgacgacg ctggcctgac cctgcgcaag ctcgatgaaa ttgaagacta 840gatggaaggc ctcgacgacg ctggcctgac cctgcgcaag ctcgatgaaa ttgaagacta 840
cgaggctaag cgccctgcgt ttaagccacg cactaacgct taagttttgg cggatgagag 900cgaggctaag cgccctgcgt ttaagccacg cactaacgct taagttttgg cggatgagag 900
aagattttca gcctgat 917aagattttca gcctgat 917
<210> 8<210> 8
<211> 1520<211> 1520
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 8<400> 8
cagtgccaag cttgcatgcc tgcaggtcga ctctagcgtg ccggcatgat cgccccagac 60cagtgccaag cttgcatgcc tgcaggtcga ctctagcgtg ccggcatgat cgccccagac 60
caaaccacct tcgactacgt tgaaggccgc gaaatggcac caaagggcgc cgactgggac 120caaaccacct tcgactacgt tgaaggccgc gaaatggcac caaagggcgc cgactgggac 120
gaagcagttg cttactggaa gaccctgcca accgacgaag gcgcaacctt tgacaaggtc 180gaagcagttg cttactggaa gaccctgcca accgacgaag gcgcaacctt tgacaaggtc 180
gtagaaatcg atggctccgc actgacccca ttcatcacct ggggcaccaa cccaggccaa 240gtagaaatcg atggctccgc actgacccca ttcatcacct ggggcaccaa cccaggccaa 240
ggtctgccac tgagcgaaac cgtgccaaac ccagaagact tcaccaacga caacgacaag 300ggtctgccac tgagcgaaac cgtgccaaac ccagaagact tcaccaacga caacgacaag 300
gcagcagccg aaaaggcact gcagtacatg gacctggtac caggaacccc actgcgcgac 360gcagcagccg aaaaggcact gcagtacatg gacctggtac caggaacccc actgcgcgac 360
atcaagatcg acaccgtctt cctgggatcc tgcaccaacg cccgcatcga agacctgcag 420atcaagatcg acaccgtctt cctgggatcc tgcaccaacg cccgcatcga agacctgcag 420
atcgccgctg acatcctcaa gggccacaaa atcgccgacg gcatgcgcat gatggtcgtg 480atcgccgctg acatcctcaa gggccacaaa atcgccgacg gcatgcgcat gatggtcgtg 480
ccttcctcca cctggatcaa gcaagaggcc gaagcactcg gactggacaa aatcttcacc 540ccttcctcca cctggatcaa gcaagaggcc gaagcactcg gactggacaa aatcttcacc 540
gacgctggcg ctgaatggcg taccgcaggc tgctccatgt gcctgggcat gaacccagac 600gacgctggcg ctgaatggcg taccgcaggc tgctccatgt gcctgggcat gaacccagac 600
caactgaagc caggcgagcg ctctgcatcc acctccaacc gaaacttcga aggacgccaa 660caactgaagc caggcgagcg ctctgcatcc acctccaacc gaaacttcga aggacgccaa 660
ggaccaggag gccgcaccca cctggtatcc ccagcagtcg cagccgccac cgcaatccgc 720ggaccaggag gccgcaccca cctggtatcc ccagcagtcg cagccgccac cgcaatccgc 720
ggcaccctgt cctcacctgc agatatctaa ggaaggctag aaaaagagtt tcagtctgat 780ggcaccctgt cctcacctgc agatatctaa ggaaggctag aaaaagagtt tcagtctgat 780
agcgaaagca ccccgcaacc ttcattgtcg cggggtgcat ttgtgcgtct tggtgggcga 840agcgaaagca ccccgcaacc ttcattgtcg cggggtgcat ttgtgcgtct tggtgggcga 840
gtggagtggg catgtctgga atagaccaag aggccctgga ttcccttaag gtcttggtct 900gtggagtggg catgtctgga atagaccaag aggccctgga ttcccttaag gtcttggtct 900
ttttcgtacg ttttgaggcc tgggaagtgc atatccagac caagggaccc cggcaagcca 960ttttcgtacg ttttgaggcc tgggaagtgc atatccagac caagggaccc cggcaagcca 960
agacccttgg tttaatatga cgttccgccc cgagcaagcc gaaaccatta cctagaacgc 1020agacccttgg tttaatatga cgttccgccc cgagcaagcc gaaaccatta cctagaacgc 1020
atgaaaagtg cccctctagg atgggttcta agcccctaac aggctcaaac ccaagcccat 1080atgaaaagtg cccctctagg atgggttcta agcccctaac aggctcaaac ccaagcccat 1080
gcccgctcgc caaaccggag gccttaaacg cgctcctatt taaccggcag ggaactcgcc 1140gcccgctcgc caaaccggag gccttaaacg cgctcctatt taaccggcag ggaactcgcc 1140
aggtaatcag cgccggtgaa cacaccgtcg tgaaagctca acacccacac gctgcccttt 1200aggtaatcag cgccggtgaa cacaccgtcg tgaaagctca acacccacac gctgcccttt 1200
ttcgccttga tcttctcatc gatagggagg gtgccgttct cggagaacca tttgatcatt 1260ttcgccttga tcttctcatc gatagggagg gtgccgttct cggagaacca tttgatcatt 1260
tccggaatga tgtcgccctg cccaacgatc atcggcacgc caccttgtgc aaccacgtcg 1320tccggaatga tgtcgccctg cccaacgatc atcggcacgc caccttgtgc aaccacgtcg 1320
gtgaagcgct tcttgcaggc ctcgggatcg gtttcccagg cgtcgtcgcc gaacagtcgg 1380gtgaagcgct tcttgcaggc ctcggggatcg gtttcccagg cgtcgtcgcc gaacagtcgg 1380
ttgacggaca cgtcgaggcc gagctcatcg gcaaggggga gcgcggtggc ttggcagcga 1440ttgacggaca cgtcgaggcc gagctcatcg gcaaggggga gcgcggtggc ttggcagcga 1440
tcgggcaccg ccgagtaaat tgcggtgggt ttgaagggca acgggtaccg agctcgaatt 1500tcgggcaccg ccgagtaaat tgcggtgggt ttgaagggca acgggtaccg agctcgaatt 1500
cgtaatcatg gtcatagctg 1520cgtaatcatg gtcatagctg 1520
<210> 9<210> 9
<211> 2040<211> 2040
<212> DNA<212> DNA
<213> 人工序列(Artificial Sequence)<213> Artificial Sequence
<400> 9<400> 9
cgtgccggca tgatcgcccc agaccaaacc accttcgact acgttgaagg ccgcgaaatg 60cgtgccggca tgatcgcccc agaccaaacc accttcgact acgttgaagg ccgcgaaatg 60
gcaccaaagg gcgccgactg ggacgaagca gttgcttact ggaagaccct gccaaccgac 120gcaccaaagg gcgccgactg ggacgaagca gttgcttact ggaagaccct gccaaccgac 120
gaaggcgcaa cctttgacaa ggtcgtagaa atcgatggct ccgcactgac cccattcatc 180gaaggcgcaa cctttgacaa ggtcgtagaa atcgatggct ccgcactgac cccattcatc 180
acctggggca ccaacccagg ccaaggtctg ccactgagcg aaaccgtgcc aaacccagaa 240acctggggca ccaacccagg ccaaggtctg ccactgagcg aaaccgtgcc aaacccagaa 240
gacttcacca acgacaacga caaggcagca gccgaaaagg cactgcagta catggacctg 300gacttcacca acgacaacga caaggcagca gccgaaaagg cactgcagta catggacctg 300
gtaccaggaa ccccactgcg cgacatcaag atcgacaccg tcttcctggg atcctgcacc 360gtaccaggaa ccccactgcg cgacatcaag atcgacaccg tcttcctggg atcctgcacc 360
aacgcccgca tcgaagacct gcagatcgcc gctgacatcc tcaagggcca caaaatcgcc 420aacgcccgca tcgaagacct gcagatcgcc gctgacatcc tcaagggcca caaaatcgcc 420
gacggcatgc gcatgatggt cgtgccttcc tccacctgga tcaagcaaga ggccgaagca 480gacggcatgc gcatgatggt cgtgccttcc tccacctgga tcaagcaaga ggccgaagca 480
ctcggactgg acaaaatctt caccgacgct ggcgctgaat ggcgtaccgc aggctgctcc 540ctcggactgg acaaaatctt caccgacgct ggcgctgaat ggcgtaccgc aggctgctcc 540
atgtgcctgg gcatgaaccc agaccaactg aagccaggcg agcgctctgc atccacctcc 600atgtgcctgg gcatgaaccc agaccaactg aagccaggcg agcgctctgc atccacctcc 600
aaccgaaact tcgaaggacg ccaaggacca ggaggccgca cccacctggt atccccagca 660aaccgaaact tcgaaggacg ccaaggacca ggaggccgca cccacctggt atccccagca 660
gtcgcagccg ccaccgcaat ccgcggcacc ctgtcctcac ctgcagatat ctaaggaagg 720gtcgcagccg ccaccgcaat ccgcggcacc ctgtcctcac ctgcagatat ctaaggaagg 720
ctagaaaaag aatggaaaaa tttaccaccc acaccggcgt tggcgttcca ctgcagcgat 780ctagaaaaag aatggaaaaa tttaccaccc acaccggcgt tggcgttcca ctgcagcgat 780
ccaacgtgga caccgaccag atcatccccg ccgtctacct caagcgcgtc acccgcacag 840ccaacgtgga caccgaccag atcatccccg ccgtctacct caagcgcgtc acccgcacag 840
gcttcgaaga cggactgttt tccaactggc gccaaaacga ccccaacttt gtcctcaaca 900gcttcgaaga cggactgttt tccaactggc gccaaaacga ccccaacttt gtcctcaaca 900
ccgacaccta caagaacggc tccgttctcg tagcaggccc tgactttggc accggctcct 960ccgacaccta caagaacggc tccgttctcg tagcaggccc tgactttggc accggctcct 960
cccgcgagca cgccgtctgg gcactcatgg actacggctt ccgcgctgtc ttctcctcac 1020cccgcgagca cgccgtctgg gcactcatgg actacggctt ccgcgctgtc ttctcctcac 1020
gattcgccga catcttccgc ggcaactccg gaaaagctgg catgctcgcc ggcatcatgg 1080gattcgccga catcttccgc ggcaactccg gaaaagctgg catgctcgcc ggcatcatgg 1080
aacagtccga catcgaactt ctgtggaagc tcatggaaca aaccccgggc ctcgaactga 1140aacagtccga catcgaactt ctgtggaagc tcatggaaca aaccccgggc ctcgaactga 1140
ccgtgaacct ggaaaagcag atcgtcactg caggcgacgt agtgatcagc ttcgaagttg 1200ccgtgaacct ggaaaagcag atcgtcactg caggcgacgt agtgatcagc ttcgaagttg 1200
acccttacat tcgctggcgt ttgatggaag gcctcgacga cgctggcctg accctgcgca 1260acccttacat tcgctggcgt ttgatggaag gcctcgacga cgctggcctg accctgcgca 1260
agctcgatga aattgaagac tacgaggcta agcgccctgc gtttaagcca cgcactaacg 1320agctcgatga aattgaagac tacgaggcta agcgccctgc gtttaagcca cgcactaacg 1320
cttaagtttc agtctgatag cgaaagcacc ccgcaacctt cattgtcgcg gggtgcattt 1380cttaagtttc agtctgatag cgaaagcacc ccgcaacctt cattgtcgcg gggtgcattt 1380
gtgcgtcttg gtgggcgagt ggagtgggca tgtctggaat agaccaagag gccctggatt 1440gtgcgtcttg gtgggcgagt ggagtgggca tgtctggaat agaccaagag gccctggatt 1440
cccttaaggt cttggtcttt ttcgtacgtt ttgaggcctg ggaagtgcat atccagacca 1500cccttaaggt cttggtcttt ttcgtacgtt ttgaggcctg ggaagtgcat atccagacca 1500
agggaccccg gcaagccaag acccttggtt taatatgacg ttccgccccg agcaagccga 1560agggaccccg gcaagccaag acccttggtt taatatgacg ttccgccccg agcaagccga 1560
aaccattacc tagaacgcat gaaaagtgcc cctctaggat gggttctaag cccctaacag 1620aaccattacc tagaacgcat gaaaagtgcc cctctaggat gggttctaag cccctaacag 1620
gctcaaaccc aagcccatgc ccgctcgcca aaccggaggc cttaaacgcg ctcctattta 1680gctcaaaccc aagcccatgc ccgctcgcca aaccggaggc cttaaacgcg ctcctattta 1680
accggcaggg aactcgccag gtaatcagcg ccggtgaaca caccgtcgtg aaagctcaac 1740accggcaggg aactcgccag gtaatcagcg ccggtgaaca caccgtcgtg aaagctcaac 1740
acccacacgc tgcccttttt cgccttgatc ttctcatcga tagggagggt gccgttctcg 1800acccaacacgc tgcccttttt cgccttgatc ttctcatcga tagggagggt gccgttctcg 1800
gagaaccatt tgatcatttc cggaatgatg tcgccctgcc caacgatcat cggcacgcca 1860gagaaccatt tgatcatttc cggaatgatg tcgccctgcc caacgatcat cggcacgcca 1860
ccttgtgcaa ccacgtcggt gaagcgcttc ttgcaggcct cgggatcggt ttcccaggcg 1920ccttgtgcaa ccacgtcggt gaagcgcttc ttgcaggcct cgggatcggt ttcccaggcg 1920
tcgtcgccga acagtcggtt gacggacacg tcgaggccga gctcatcggc aagggggagc 1980tcgtcgccga acagtcggtt gacggacacg tcgaggccga gctcatcggc aagggggagc 1980
gcggtggctt ggcagcgatc gggcaccgcc gagtaaattg cggtgggttt gaagggcaac 2040gcggtggctt ggcagcgatc gggcaccgcc gagtaaattg cggtgggttt gaagggcaac 2040
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| CN117106042A (en) | 2023-11-24 |
| CN117106042B (en) | 2025-06-13 |
| CN113683666A (en) | 2021-11-23 |
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