CN113174395A - Mutant gene DHQ-SDH1 related to smoke phenol release amount - Google Patents

Mutant gene DHQ-SDH1 related to smoke phenol release amount Download PDF

Info

Publication number
CN113174395A
CN113174395A CN202110480149.4A CN202110480149A CN113174395A CN 113174395 A CN113174395 A CN 113174395A CN 202110480149 A CN202110480149 A CN 202110480149A CN 113174395 A CN113174395 A CN 113174395A
Authority
CN
China
Prior art keywords
tobacco
dhq
sdh1
mutant
gene
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
CN202110480149.4A
Other languages
Chinese (zh)
Other versions
CN113174395B (en
Inventor
李锋
王燃
金立锋
董臣
魏攀
郑庆霞
孙涛
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Zhengzhou Tobacco Research Institute of CNTC
Original Assignee
Zhengzhou Tobacco Research Institute of CNTC
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Zhengzhou Tobacco Research Institute of CNTC filed Critical Zhengzhou Tobacco Research Institute of CNTC
Priority to CN202110480149.4A priority Critical patent/CN113174395B/en
Publication of CN113174395A publication Critical patent/CN113174395A/en
Application granted granted Critical
Publication of CN113174395B publication Critical patent/CN113174395B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/0004Oxidoreductases (1.)
    • C12N9/0006Oxidoreductases (1.) acting on CH-OH groups as donors (1.1)
    • AHUMAN NECESSITIES
    • A01AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01HNEW PLANTS OR NON-TRANSGENIC PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
    • A01H1/00Processes for modifying genotypes ; Plants characterised by associated natural traits
    • A01H1/02Methods or apparatus for hybridisation; Artificial pollination ; Fertility
    • AHUMAN NECESSITIES
    • A01AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
    • A01HNEW PLANTS OR NON-TRANSGENIC PROCESSES FOR OBTAINING THEM; PLANT REPRODUCTION BY TISSUE CULTURE TECHNIQUES
    • A01H1/00Processes for modifying genotypes ; Plants characterised by associated natural traits
    • A01H1/04Processes of selection involving genotypic or phenotypic markers; Methods of using phenotypic markers for selection
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y101/00Oxidoreductases acting on the CH-OH group of donors (1.1)
    • C12Y101/01Oxidoreductases acting on the CH-OH group of donors (1.1) with NAD+ or NADP+ as acceptor (1.1.1)
    • C12Y101/01282Quinate/shikimate dehydrogenase (1.1.1.282)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/13Plant traits
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Botany (AREA)
  • Biochemistry (AREA)
  • Analytical Chemistry (AREA)
  • Environmental Sciences (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Developmental Biology & Embryology (AREA)
  • Immunology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Mycology (AREA)
  • Medicinal Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The invention belongs to the technical field of tobacco biology, and particularly relates to a plurality of mutant gene sequences related to the release amount of phenol in smoke. Mutant gene related to phenol release amount of smokeDHQ‑SDH1Is tobacco dehydroquinic acid dehydrogenase/shikimic acid dehydrogenase mutant gene. In the present application, the inventor treats tobacco byDHQ‑SDH1TyrAFurther research on the genes shows that the two genes are highly related to the content of the released tyrosine and the released phenol in the tobacco. Based on the discovery, the protein III is carried out by analyzing sense mutation which is predicted to generate coding protein and is further combined with the Tilling screening technologyThe stage structure prediction is combined with the actual field experiment verification, and the result shows that the tyrosine content and the smoke phenol release amount in the tobacco are obviously reduced after the two genes are mutated. Based on the research results, a certain theoretical basis and technical basis can be established for the cultivation of new varieties of tobacco leaves with low phenol content.

Description

Mutant gene DHQ-SDH1 related to smoke phenol release amount
Technical Field
The invention belongs to the technical field of tobacco biology, and particularly relates to a plurality of mutant gene sequences related to the release amount of phenol in smoke.
Background
Phenol, one of the main harmful components in smoke, is rapidly distributed in all tissues after being inhaled along with the smoke, has remarkable mucosal permeability, and can cause tissue necrosis and erosion and shedding. Therefore, the control of phenol content in smoke is important from the viewpoint of reducing the smoking hazard of tobacco.
The research shows that tobacco leaf protein, free tyrosine (Tyr), chlorogenic acid (CGA) and the like are the main precursors of smoke phenol. Tyr (tyrosine) is a source of phenolic groups in plants, where it is stored in most protein forms in roots, stems and leaves. The existing research shows that the precursor of Tyr in the plant can generate free Tyr under the action of arogenate dehydrogenase (TyrA). On the other hand, Tyr is one of Aromatic Amino Acids (AAA), and is closely related to the shikimic acid pathway of AAA biosynthesis in plants. In the shikimic acid pathway, Dehydroquinate Dehydrogenase (DHQ) and shikimic acid dehydrogenase (SDH) can be fused to form bifunctional enzyme (DHQ-SDH), and further participate in catalyzing the generation of shikimic acid. Research finds that the tobaccoDHQ-SDH1The series of RNAi tobacco lines of (a) exhibits different phenotypes; when the silencing degree is 40-60%, the downstream aromatic metabolites are slightly reduced, and the tobacco does not show a remarkable phenotype; while the degree of silencing is 60-85%, the downstream aromatic metabolites are significantly reduced and the tobacco shows a slightly dwarf phenotype (Ding L et al. Functional analysis of the developmental biofunctional tobacco 3-dehydrogenate dehydrogenase/shikimate dehydrogenase in transgenic plants of Journal of Experimental Botany, 2007). Further research shows that the number of the corns is 4ZmTyrAThe expression patterns of the gene members, 4 members, are different, whereinZmTyrA1The mutation(s) in (a) causes a decrease in the amino acid content of aromatic amino acids (Holding DR et al. Identification and characterization of the main aromatic dehydrogenase gene family. Journal of experimental botanic, 2010). This indicates that it is desirable to have,DHQ-SDH1andTyrAit is suitable as a target gene for genetic engineering modification. Therefore, based on these biological studies, if the content of the tobacco-related precursor can be controlled by related biotechnology, it is possible to effectively and fundamentally reduce the release amount of phenol in smoke.
Disclosure of Invention
Based on TILLING (Targeted Induced Local losses IN genes, directionally Induced gene mutation) technology, the application aims to provide a plurality of mutated gene sequences related to phenol precursors, thereby laying a certain technical foundation for breeding new varieties of related low-phenol release tobacco.
The technical scheme provided by the application is detailed as follows.
Mutant gene related to phenol release amount of smokeDHQ-SDH1The mutant geneDHQ-SDH1The mutant gene of tobacco dehydroquinate dehydrogenase/shikimate dehydrogenase has a base sequence shown in SEQ ID No.1, wherein the specific nucleic acid fragment is 24-1530 base;
the tobacco dehydroquinic acid dehydrogenase/shikimic acid dehydrogenase mutant gene (DHQ-SDH1) The amino acid sequence of the encoded tobacco DHQ-SHD1 protein is shown in SEQ ID NO.2, and the encoded tobacco DHQ-SHD1 protein consists of 515 amino acid residues, wherein amino acids 8-510 are conserved 3-dehydroquinic acid dehydratase/shikimate dehydrogenase structural domains.
The tobacco dehydroquinic acid dehydrogenase/shikimic acid dehydrogenase mutant geneDHQ-SDH1Specific CDS sequences and corresponding amino acid sequence mutation sites compared to wild type are referenced below:
A262G→K88E,G286A→E96K,G295A→E99K,G298A→V100I,G307A→E103K,G317A→C106Y,G445A→G149R,C637T→P213S,C647T→P216L,A863G→D288G。
mutant gene related to phenol release amount of smokeTyrAThe mutant geneTyrAThe gene is a tobacco aroate dehydrogenase gene, the base sequence of which is shown as SEQ ID NO.3, wherein the specific nucleic acid segment is 1-708 bases;
the tobacco aronic acid dehydrogenase geneTyrAThe amino acid sequence of the encoded tobacco TyrA protein is shown in SEQ ID NO.4 and consists of 243 amino acid residues, wherein the amino acids from 1 to 236 are NADB _ Rossmann superfamily conserved domains.
The tobacco aronic acid dehydrogenase geneTyrACompared with the wild type, the CDS sequence and the corresponding amino acid sequence mutation site are referred to as follows: G118A → E40K, G185A → C62Y, C217T → L73F, G229A → E77K, C404T → S135L, C485T → T162I.
The tobacco dehydroquinic acid dehydrogenase/shikimic acid dehydrogenase mutant gene (DHQ-SDH1) Or the application of the tobacco DHQ-SHD1 protein in the regulation and control of the tyrosine substance content or the smoke phenol release amount of the tobacco leaves, the tobacco DHQ-SHD1 protein is related to the tyrosine content and the smoke phenol release amount of the plant leaves, and after the expression amount of the protein is reduced, the tyrosine content and the smoke phenol release amount of the leaves are obviously reduced; by regulating tobacco using biotechnological methodsDHQ-SDH1The gene expression level, and further the expression level of the DHQ-SHD1 protein of the tobacco can be regulated, and the tyrosine content and the smoke phenol release amount in the tobacco leaves can be regulated and controlled.
The mutant gene of the tobacco aroate dehydrogenase or tobaccoTyrAIn the application of the protein in regulating and controlling the tyrosine substance content or the smoke phenol release amount of the tobacco leaves, the TyrA protein of the tobacco is related to the tyrosine content and the smoke phenol release amount of the plant leaves, and after the expression amount of the protein is reduced, the tyrosine content and the smoke phenol release amount of the leaves are obviously reduced; by regulating tobacco using biotechnological methodsTyrAThe gene expression level, and further the tobacco TyrA protein expression level can be regulated, and the tyrosine substance content and the smoke phenol release amount in the tobacco leaves can be regulated and controlled.
Using the tobacco dehydroquinate dehydrogenase/shikimate dehydrogenase mutant gene (DHQ-SDH1) The method for cultivating a new variety of tobacco comprises constructing a tobacco product containing a gene having a sequence of mutations, a gene transfer technique, a transient expression technique or a genome editing techniqueDHQ-SDH1The virus-induced silencing vector, RNAi interference vector, overexpression vector or genome editing vector of the gene are used for transforming tobacco and screening to obtain a new tobacco variety with reduced tyrosine content and smoke phenol release amount.
Using said tobacco aroate dehydrogenase mutant gene (a)TyrA) The method for cultivating a new variety of tobacco comprises constructing a tobacco product containing a gene having a sequence of mutations, a gene transfer technique, a transient expression technique or a genome editing techniqueTyrAThe virus-induced silencing vector, RNAi interference vector, overexpression vector or genome editing vector of the gene are used for transforming tobacco and screening to obtain a new tobacco variety with reduced tyrosine content and smoke phenol release amount.
Tobaccotyra/dhq-sdh1Method for breeding new tobacco variety with double mutants by using mutant genesTyrATobacco and tobacco containing mutant geneDHQ-SDH1The tobacco is selected as parent and obtained by genetic hybridizationtyra/dhq-sdh1Double mutant homozygotes;
the mutant geneTyrAIn this mutant, compared with the wild typeTyrAThe 217 th base of the gene is mutated C → T, the corresponding 73 rd amino acid is mutated L → F;
the mutant geneDHQ-SDH1In this mutant, compared with the wild typeDHQ-SDH1The 863 th base of the gene is mutated A → G and the corresponding 288 th amino acid is mutated D → G;
specifically, the method comprises the following steps:
simultaneously seeding tobaccotyraAnddhq-sdh1mutants and cultivation;
genetic hybridization is carried out at the flowering stage, and specifically, the hybridization: to be provided withdhq-sdh1Using the mutant as female parent, removing excessive buds, selecting unopened buds, removing stamen, and collectingtyraPollen of mutant and applying it todhq-sdh1The stigmas of the pistils of the mutants are put on the stigmas and then bagged for reserving seeds; after the hybridized seeds are mature, collecting the seeds;
preferably, the homozygosity is ensured by means of a multi-generation seeding screen, in particular:
about 30 days after F1 generation, DNA of tobacco was extracted and sequenced, and the DNA contained thereinTyrAAndDHQ-SDH1reserving the mutant;
about 30 days after F2 generation, DNA of tobacco was extracted and sequenced, and the DNA contained thereinTyrAAndDHQ-SDH1reserving the mutant;
about 30 days after F3 sowing, extracting DNA of tobacco, sequencing, and determining the seed reservation of F2 progenytyra/dhq-sdh1Double mutation as the finaltyra/dhq-sdh1Double mutant homozygotes.
It has been shown that tobaccoDHQ-SDH1The gene family comprises a plurality of family members which are expressed in a plurality of plant organs, but the functions of different members are different, and part of the gene expression amount has a certain correlation with the plant phenotype change (Zhang et al, general tobacco DHD-SDH gene family analysis, tobacco science and technology, 2018; Ding L et al, Functional analysis of the essential biofunctional tobacco enzyme 3-hydrolysis dehydrogenase/shikimate dehydrogenase in transgenic plants, Journal of Experimental Botany, 2007). The number and expression pattern of TyrA proteins vary from species to species (Rippet P et al, Purification and kinetic analysis of the two recombinant expression of the microorganisms of Arabidopsis thaliana, European Journal of biological chemistry, 2002; Holding DR et al, Identification and characterization of the microbial expression, Journal of experimental biology, 2010).
Based on the existing research, the inventor in the application carries out the research on the tobaccoDHQ-SDH1TyrAFurther research on the genes shows that the two genes are highly related to the content of the released tyrosine and the released phenol in the tobacco. Based on the discovery, the prediction of the tertiary structure of the protein is carried out by further combining with the Tilling screening technology and analyzing and predicting the sense mutation generated by the encoded protein, and the results are verified by combining with the actual field experiment, so that the tyrosine content and the smoke phenol release amount in the tobacco are generated after the two genes are mutatedIs obviously reduced. Based on the research results, a certain theoretical basis and technical basis can be established for the cultivation of new varieties of tobacco leaves with low phenol content.
Drawings
FIG. 1 shows the Tyr content results in mutant tobacco leaves;
FIG. 2 is the results of total protein content in mutant tobacco leaves;
FIG. 3 shows the results of maximum photochemical efficiency of mutant tobacco leaves;
FIG. 4 is a result of the release amount of phenolic substances in smoke of a cigarette sample prepared from a mutant tobacco leaf;
FIG. 5 shows the Tyr content results in double mutant tobacco leaves;
FIG. 6 is a result of the release amount of phenolic substances in smoke of a cigarette sample prepared by using double mutant tobacco leaves.
Detailed Description
The technical solution of the present application is further explained with reference to the following examples.
Example 1
It should be noted that, since the related mutant sequences are obtained by screening based on the EMS mutant library by the Tilling technique, the construction and screening processes of the related mutant library are briefly described as follows.
(I) EMS mutant library construction
EMS treatment is carried out on 87 seeds of common tobacco Yunyan (provided by tobacco agricultural science research institute in Yunnan province) by referring to conventional operation, the treated seeds are used as M1 generation mutant seeds for field planting, and M2 generation seeds are harvested by bagging and selfing.
Finally, about 2200 parts of EMS mutant plants of M2 generation are harvested after field planting, and the collected leaves are subjected to genome DNA extraction. During determination, all sample DNA concentrations are diluted to 40 ng/. mu.L, each 8 DNA samples are mixed to form an 8-time mixing pool, and the mixing pool is stored in a 96-well plate for subsequent mutant screening. Finally, a DNA library containing 1842M 2 generation Yunnan tobacco 87 mutant was established.
(II) Tilling screening
Based on the existing studies, respectively related to Tyr (tyrosine) synthesisDHQ-SDH1Gene, gene,TyrAThe gene is a target gene, to the step (a)I) performing Tilling screening on the EMS mutant library constructed in the first step.
(1) Designing primers and carrying out PCR amplification
To is directed atDHQ-SDH1When a gene is selected, the DNA sequence of the gene is too long, and the gene is segmented. Based on the existingDHQ-SDH1Specific primers were designed for the GS1 sequence (823 bp, containing the second and third exons) and the GS2 sequence (947 bp, containing the fourth exon) of the gene.
DHQ-SDH1GS1 sequence of gene:
AAAATCTTACTGATTGGGAATTTGTTGACATTTTACTCCAATTACTGAAAATGGTTCTCTTCGATTTTGTGATCCAATCTGCCAAAAAGTGAGGCGAATTGACCAAAAGCTTGAACCTTTGCGAAATCTTGCTGATTGAGAATTTGGGGTTTGTTTTCTCAGGCCAAATTCGCCGAGATATTCTTGCAGAGAAAACTGGAAGAAAACATGCTTGCAAGTTCTGAAATTGGCTGTTGAATTGGACGTCGAGTTCGTTGAAGTTGACCGCGAGGTTAGTCCAACTGATTTTCTCAAATTACTCTCTAATTGATACAGTTTTATTGAAGCTAAATAAATCAAAATAATCAAAAAAGAATCTTGCTTAAGAGAGTAAATCATTGTACAAGTTTCCTCTTTTATGTTTATATGATGATTTAACAATGATAGCAGGTTTACTATCATTTTTATCAGGTTATATATTTTTTACATAATCAGCTTATAGAAATTAAACTCTTTGCAACTTTATAGGTTGCTTGCGATGAGGTCATCTGTGAATTAATGACCAAACGATCGAACTGCAAGATAATTGCCTCCAGTCATGTGAATGGTGGAAATCCTACAAAAGAGAGACTTTGTAATTTAATTGCAAACCTGCAGTCAACAGGAGCAGATATCATCAAATTAGTGATTGATGTAGCTTATATTACAGATGTTGCACCAGTTTTTCATATGCTTACACATTGTCAGGTATTTCTTTTCTTGCTTTAACTTGCACTTTTTCCTTGCAAAAACACACCCTCAACTTGCTTTTAGCTTTACACCTATTGATAAATTTGAGGTGTTC
DHQ-SDH1GS2 sequence of gene:
TAGCTTTACACCTATTGATAAATTTGAGGTGTTCAGTATTTATATTCTCACTACTGCGTTCGTTGCAATTTTAGTGATCATTCACATATATAGTTATCATCCGTGTAAAAGATACTGGGTTTTCTTGAACCCGTGGAAACTACATTGCATCCCCTCTGATGGTATACTTGCTCAATTCAACTTACCGACAAGAAGAGAGAAAAGGGGTCTGCTTTAAAATCTTTCTACGCGAACTGCTGTTGATATACTTAATTTTTCTGCGATGAAGTGTTCATTAGAAAATACTCTCATATTTTCTTCCATATATATGGCCTCTTATTTGTATCTGCAGCCATCTCTTGGGCTTATATGGTTGTAAAGAAAATCTTTTAATGCTAGTTTCCTTGTGAGTAGTGATAAGTTTGTTGAACTTCTCTTTTTAAAACTGAGAATGAGGTACTTTTTTGCCTCATTATAAGGTCTCTATGCAGGTGCCTCTAATTGCCAGGGCAGCAGGAGATAGAGGTCTTATAAGCCAACTATTGGGTCCAAAATATGGTGCTTTCTTTGTTTGTGGATCTTTAGGAGGCAAATCCAACCCTGGCTTGCCAGCTTTGACTAGCATTAAAGACGTTTATAAACTGGAATATGTGAACCAAGATACTAGAGTTTTTGGCGTAATCTCTAATCCTGTTGGCCATAGCAAGGGCCCTCTTCTGCACAACCCTGCCTTTAGACATACAGGATACAATGGAATATATGTGCCTCTACTAGTTGATAATATCAAGGAATTTTTTCGGGTCTTCTCATGCAATGACTATGCTGGTTTTAGGTATGCTCCTTATGTACAAGCTAAAATTGTTCTGTGCCGCATACTGATGAATAACTGCCAGATTGTATTAGGAATATCTAAAGATTCCTACTCGTCAAGCATAAATGTATGCCATATATAAGCAACACTCATCTTA
the specific primer design is as follows:
a forward primer:
DHQ1_Tilling_F:5′- AAAATCTTACTGATTGGGAATTTGTTG-3′,
DHQ2_Tilling_F:5′- TAGCTTTACACCTATTGATAAATTTGAGG-3′;
reverse primer:
DHQ1_Tilling_R:5′- GAACACCTCAAATTTATCAATAGGTGT-3′,
DHQ2_Tilling_R:5′- TAAGATGAGTGTTGCTTATATATGGC-3′。
to is directed atTyrAWhen the gene is selected, the gene is based onTyrAThe specific primer is designed according to the partial DNA sequence GS1 (976 bp, containing second and third exons);
TyrAGS1 sequence of gene:
GAATGAACAACTTTTCCAGCTAATGACTGCTTATGTTCATTTATTCACTTGCAGGGATATGGGTGCATTTCTTGAATCAGACAATGAGGTTATTATAATTAGCACGTCGATACTGTCTCTATCACGAGTTGTAGAGTCCATACCATTCCATTGTCTCAAGCGGCCTACACTTTTCGTTGATGTACTCTCAGTTAAAGAACACCCAAAAGATGTCCTTTTGCGAGTATGCAATTCACACCAACATTATTAATTTCAAGACTTTTGACTTCTGCAGCTTCACATACGTTTGTATGTTGAACAGTAATATGTCTAACAACGGTTGCATACTATGTGTTCGAAAGATATTGCCCGAGGAGTGCGACTTGCTGTGTACTCACCCAATGTTTGGACCACAAAGTGGAAAAGATGGATGGACTGATTTGACTTTTATGTACGACATGATTCGAATTAGAGATAAATCTCTGTGTTCCAGTTTTCTGCAAATATTCTCAAGTGAGGTAAGAAGTTCAAATATGCCCAAAGTTGTGTTCGTCAATGTTATTACTTTCTCATTGATTTTGGCTAGCTAGACTAGCATGGTTCATTCTATTACTAGCTCCTTGAGCTGAAATTCTCCTGTATTGACTGGAAAACTGAGGAAAGAGAACCCCATATCTGAGTATTGCACGAATCTTCTGTTGCAGGGGTGCAAAATGCTGGAAATGACTTGTGAAGAGCATGACAAATTGGCTGCTCGAAGTCAATTTCTGACTCACACAATTGGCAGGTAACTTGTGTCACCTACAACTGTAGAAAGAGGTCATCACAATTACCAACTACTATTAATCTTCTTCACCTAACAGGATCTTATCCGAAATGGAGGTTGAACCCACCCCCATAGACACGAAGGGATTTCAGAAACTTGTTCAAGTGGTAAATACAACATTGACTTGTACCTTTTCAAGATTATACTTGTAGCAAATTAAGCGTGTTTTTC
the forward primer is
TyrA_Tilling_F:5′- GAATGAACAACTTTTCCAGCTAATGAC-3′,
The reverse primer is
TyrA_Tilling_R:5′-GAAAAACACGCTTAATTTGCTACAAGTA-3′。
And (3) during PCR amplification, taking DNA extracted from the mutant library sample in the step (I) as a template, and respectively carrying out PCR amplification by using the primer pairs.
During PCR amplification, a 10 mu L amplification system is designed as follows:
DNA template, 0.5 μ L (about 20 ng);
2MM dNTPs,2µL;
KOD FX polymerase (TOYOBO Co.), 0.5. mu.L;
forward primer, 1 μ L;
reverse primer, 1 μ L;
2× KOD FX buffer,5μL。
amplification conditions: 2min at 95 ℃; extending at 98 deg.C, 10s, 64 deg.C, 30s, and 68 deg.C for 1min, 4 cycles, and sequentially reducing annealing temperature by 1 deg.C; at 98 deg.C, 10s, 60 deg.C, 30s, 68 deg.C, 1min, 45 cycles; at 68 deg.C for 5 min; keeping at 4 ℃.
(2) CELI digestion and electrophoresis analysis
Subsequently, CELI enzyme digestion is respectively carried out on the PCR amplification products, and a 6-mu-L enzyme digestion system is designed as follows:
CEL I (Takara Co., Ltd.), 0.2. mu.L;
10× CEL1 buffer,1.2 μL;
PCR product, 2. mu.L;
sterile water, 2.6 μ L.
The cleavage products were subjected to capillary electrophoresis (Advanced Analytical Technologies, USA)) respectively.
(3) Mutation site sequencing verification and protein function prediction
And (3) screening and determining target EMS mutant individuals based on the enzyme digestion analysis result in the step (2).
Aiming at the target EMS mutant individuals determined by preliminary screening, extracting the genomic DNA of the target tobacco mutant leaf by using a DNA extraction kit (Shanghai Biotechnology); using the extracted genomic DNA as a template, amplifying the genomic DNA by using DHQ1_ Tilling _ F/R, DHQ2_ Tilling _ F/R, TyrA _ Tilling _ F/R primer pairs, recovering PCR products, and performing sequencing analysis (see conventional procedures in the prior art for related operations).
Furthermore, the on-line tool PROVEAN Protein (http:// Provean. jcvi. org/seq _ sumit. php) was used to perform the prediction analysis of gene function of the sequenced mutant sequence. When analyzed, a score of less than-2.5 indicates that the mutation at that site affects its protein function, and conversely, that the mutation does not affect much.
When screening is carried out based on the Tilling technology, 10 mutants of the Yunyan 87 are obtained by primary screening in a Yunyan 87 mutant libraryDHQ-SDH1The type of gene mutation. The specific mutation sites and the prediction of functions, scores, etc. are shown in Table 1 below. Among them, the mutant M330 underwent E99K and G149R mutations, and M283 underwent P213S mutation.
TABLE 1 screening based on the Tilling techniqueDHQ-SDH1Mutation status of Gene mutant
Figure DEST_PATH_IMAGE001
When screening is carried out based on the Tilling technology, 6 mutants of the Yunyan 87 are obtained by screening in a Yunyan 87 mutant libraryTyrAThe type of gene mutation. The specific mutation sites and the prediction of functions, scores, etc. are shown in Table 2 below. Among them, mutant M837 underwent E40K mutation.
TABLE 2 screening based on the Tilling techniqueTyrAMutation status of Gene mutant
Figure 698269DEST_PATH_IMAGE002
Sequencing results show that the M330 mutant strainDHQ-SDH1The GS1 sequence of the gene is underlined (257 sites and 642 sites) and comprises 823 bases, and the sequence is as follows:
AAAATCTTACTGATTGGGAATTTGTTGACATTTTACTCCAATTACTGAAAATGGTTCTCTTCGATTTTGTGATCCAATCTGCCAAAAAGTGAGGCGAATTGACCAAAAGCTTGAACCTTTGCGAAATCTTGCTGATTGAGAATTTGGGGTTTGTTTTCTCAGGCCAAATTCGCCGAGATATTCTTGCAGAGAAAACTGGAAGAAAACATGCTTGCAAGTTCTGAAATTGGCTGTTGAATTGGACGTCGAGTTCGTTAAAGTTGACCGCGAGGTTAGTCCAACTGATTTTCTCAAATTACTCTCTAATTGATACAGTTTTATTGAAGCTAAATAAATCAAAATAATCAAAAAAGAATCTTGCTTAAGAGAGTAAATCATTGTACAAGTTTCCTCTTTTATGTTTATATGATGATTTAACAATGATAGCAGGTTTACTATCATTTTTATCAGGTTATATATTTTTTACATAATCAGCTTATAGAAATTAAACTCTTTGCAACTTTATAGGTTGCTTGCGATGAGGTCATCTGTGAATTAATGACCAAACGATCGAACTGCAAGATAATTGCCTCCAGTCATGTGAATGGTGGAAATCCTACAAAAGAGAGACTTTGTAATTTAATTGCAAACCTGCAGTCAACAAGAGCAGATATCATCAAATTAGTGATTGATGTAGCTTATATTACAGATGTTGCACCAGTTTTTCATATGCTTACACATTGTCAGGTATTTCTTTTCTTGCTTTAACTTGCACTTTTTCCTTGCAAAAACACACCCTCAACTTGCTTTTAGCTTTACACCTATTGATAAATTTGAGGTGTT。
sequencing results show that the M283 mutant strainDHQ-SDH1The GS2 sequence of the gene comprises 947 bases, and the underlined (579 site) is the mutated base, which is specifically as follows:
TAGCTTTACACCTATTGATAAATTTGAGGTGTTCAGTATTTATATTCTCACTACTGCGTTCGTTGCAATTTTAGTGATCATTCACATATATAGTTATCATCCGTGTAAAAGATACTGGGTTTTCTTGAACCCGTGGAAACTACATTGCATCCCCTCTGATGGTATACTTGCTCAATTCAACTTACCGACAAGAAGAGAGAAAAGGGGTCTGCTTTAAAATCTTTCTACGCGAACTGCTGTTGATATACTTAATTTTTCTGCGATGAAGTGTTCATTAGAAAATACTCTCATATTTTCTTCCATATATATGGCCTCTTATTTGTATCTGCAGCCATCTCTTGGGCTTATATGGTTGTAAAGAAAATCTTTTAATGCTAGTTTCCTTGTGAGTAGTGATAAGTTTGTTGAACTTCTCTTTTTAAAACTGAGAATGAGGTACTTTTTTGCCTCATTATAAGGTCTCTATGCAGGTGCCTCTAATTGCCAGGGCAGCAGGAGATAGAGGTCTTATAAGCCAACTATTGGGTCCAAAATATGGTGCTTTCTTTGTTTGTGGATCTTTAGGAGGCAAATCCAACTCTGGCTTGCCAGCTTTGACTAGCATTAAAGACGTTTATAAACTGGAATATGTGAACCAAGATACTAGAGTTTTTGGCGTAATCTCTAATCCTGTTGGCCATAGCAAGGGCCCTCTTCTGCACAACCCTGCCTTTAGACATACAGGATACAATGGAATATATGTGCCTCTACTAGTTGATAATATCAAGGAATTTTTTCGGGTCTTCTCATGCAATGACTATGCTGGTTTTAGGTATGCTCCTTATGTACAAGCTAAAATTGTTCTGTGCCGCATACTGATGAATAACTGCCAGATTGTATTAGGAATATCTAAAGATTCCTACTCGTCAAGCATAAATGTATGCCATATATAAGCAACACTCATCTTA。
sequencing results show that the M837 mutant strainTyrAThe GS1 sequence of the gene comprises 976 bases, and the underlined (86 site) is the mutated base, which is specifically as follows:
GAATGAACAACTTTTCCAGCTAATGACTGCTTATGTTCATTTATTCACTTGCAGGGATATGGGTGCATTTCTTGAATCAGACAATAAGGTTATTATAATTAGCACGTCGATACTGTCTCTATCACGAGTTGTAGAGTCCATACCATTCCATTGTCTCAAGCGGCCTACACTTTTCGTTGATGTACTCTCAGTTAAAGAACACCCAAAAGATGTCCTTTTGCGAGTATGCAATTCACACCAACATTATTAATTTCAAGACTTTTGACTTCTGCAGCTTCACATACGTTTGTATGTTGAACAGTAATATGTCTAACAACGGTTGCATACTATGTGTTCGAAAGATATTGCCCGAGGAGTGCGACTTGCTGTGTACTCACCCAATGTTTGGACCACAAAGTGGAAAAGATGGATGGACTGATTTGACTTTTATGTACGACATGATTCGAATTAGAGATAAATCTCTGTGTTCCAGTTTTCTGCAAATATTCTCAAGTGAGGTAAGAAGTTCAAATATGCCCAAAGTTGTGTTCGTCAATGTTATTACTTTCTCATTGATTTTGGCTAGCTAGACTAGCATGGTTCATTCTATTACTAGCTCCTTGAGCTGAAATTCTCCTGTATTGACTGGAAAACTGAGGAAAGAGAACCCCATATCTGAGTATTGCACGAATCTTCTGTTGCAGGGGTGCAAAATGCTGGAAATGACTTGTGAAGAGCATGACAAATTGGCTGCTCGAAGTCAATTTCTGACTCACACAATTGGCAGGTAACTTGTGTCACCTACAACTGTAGAAAGAGGTCATCACAATTACCAACTACTATTAATCTTCTTCACCTAACAGGATCTTATCCGAAATGGAGGTTGAACCCACCCCCATAGACACGAAGGGATTTCAGAAACTTGTTCAAGTGGTAAATACAACATTGACTTGTACCTTTTCAAGATTATACTTGTAGCAAATTAAGCGTGTTTTTC。
based on the sequencing result of the sense mutation information and the known gene sequence information, the sequence shown in SEQ ID No. 1-4 is finally obtainedDHQ-SDH1Gene, gene,TyrAGenes and their corresponding coding amino acid sequences. For specific coding sequence (i.e., CDS) sequence information, reference may also be made to the following.
Mutant genesDHQ-SDH1The coding sequence of (SEQ ID NO.1, 1548 bp):
ATGGGTTTCAAACAAGACCTTTTAGTGTACACAACATTAGAATGTGAAAGCTTGTCTGAAATGGCAGCTTGTATGCAGAAAGCAAAAGAAGAAGGAGCAGATCTAGTGGAACTTTGCATTGACTCTTTAACTTTCACACACATTTCAGAAGTTGAACACCTTCTCAAACAGAGGACTTTACCCTCCATCGTTTCTTTCAGGCCAAATTCGCCGAGATATTCTTGCAGAGAAAACTGGAAGAAAACATGCTTGCAAGTTCTGGAATTGGCTGTTGAATTGGACGTCAAGTTTGTTAAAATTGACCGCAAGGTTGCTTATGATGAGGTCATCTGTGAATTAATGACCAAACGATCGAACTGCAAGATAATTGCCTCTAGTCATGTGAATGGTGGAAATCCTACAAAAGAGAGACTTTGTAATTTAATTGCAAACCTGCAATCAACAAGAGCAGATATCATCAAATTAGTGATTGATGTAGCTTATATTACAGATGTTGCACCAGTTTTTCATATGCTTACACATTGTCAGGTGCCTCTAATTGCCAGGGCAGCAGGAGATAAAGGTCTTATAAGCCAACTATTAGGTCCAAAATATGGTGCTTTCTTTGTTTGTGGATCTTTAGGAGGCAAATCCAACTCTGGCTTGCTAGCTTTGACTAGCATTAAAGACGTTTATAAACTGGAATATGTGAACCAAGATACTAGAGTTTTTGGCGTAATCTCTAATCCTATTGGCCATAGCAAGGGCCCTCTACTGCACAACCCTGCCTTTAGACATACAGGATACAATGGAATATATGTGCCTCTACTAGTTGATAATATCAAGGAATTTTTTCGGGTCTTCTCATGCAATGACTATGCTGGTTTTAGTGTTGGACTCCCACATAAGGAAGCAGCAGTACGGTGCTGTGATGAAGTAGATCCACTTGCTAAGTCTATAGGAGCTGTTAACACAATTATAAGGAGACCTTCTGATGGCAAGCTCATTGGTTACAATACAGATTGTGAGGCTTGTGCGACGGCAATTGAGGATGCACTTAGAGAGAGACAAAAGACCAATGGCCATGCATCAAATGTTTCTCCAATTGCTGGAAAATTGTTCGTATTAGTTGGAGCAGGTGGTGCTGGGAGAGCTATTGCTTTTGGTGTCAAAAGTAGAGGGGCAAGGGTTGTAATATTTAACCGCAAATACGAGAGAGCAAAAGCTCTGGCCGCAGCAGTATCTGGTGAAGCCTTGCCATATGAACAACTAAACGATTTCTGCCCTGAGAAGGGAATGATTCTTGCAAATGCTTCTGCTGTAGGCATGCAGCCAAGGACAGATCAAACTCCTATTTCCAAGGAGGCCTTGAGATCATATGAGCTAGTATTTGATGCAGTTTACACACCTAGAAACACGCGGCTATTGCAGGAGGCTACAGAGGTTGGAGCTGCAGTGGTGGGTGGGGTTGAGATGTTCGTCAGGCAGGCAATTGGACAGTTCAAATTGTTCACCAATGGATTAGCACCAGAAGACTTTATGCGGAGGATTGTATATGAGCAATTTTGA。
mutant DHQ-SHD1 protein (SEQ ID NO.2, 515 amino acids)
MGFKQDLLVYTTLECESLSEMAACMQKAKEEGADLVELCIDSLTFTHISEVEHLLKQRTLPSIVSFRPNSPRYSCRENWKKTCLQVLELAVELDVKFVKIDRKVAYDEVICELMTKRSNCKIIASSHVNGGNPTKERLCNLIANLQSTRADIIKLVIDVAYITDVAPVFHMLTHCQVPLIARAAGDKGLISQLLGPKYGAFFVCGSLGGKSNSGLLALTSIKDVYKLEYVNQDTRVFGVISNPIGHSKGPLLHNPAFRHTGYNGIYVPLLVDNIKEFFRVFSCNDYAGFSVGLPHKEAAVRCCDEVDPLAKSIGAVNTIIRRPSDGKLIGYNTDCEACATAIEDALRERQKTNGHASNVSPIAGKLFVLVGAGGAGRAIAFGVKSRGARVVIFNRKYERAKALAAAVSGEALPYEQLNDFCPEKGMILANASAVGMQPRTDQTPISKEALRSYELVFDAVYTPRNTRLLQEATEVGAAVVGGVEMFVRQAIGQFKLFTNGLAPEDFMRRIVYEQF。
Mutant genesTyrAThe coding sequence of (SEQ ID NO.3, 732 bp):
ATGATAAAACAAGGCCATATAATCAGGGCTACTTCTAGATCAGATTATTCAGACTTGTGCGCAAATTTGGGTATCCTATTCTTCAGGGATATGGGTGCATTTCTTGAATCAGACAATAAGATTATTATAATTAGCACGTCGATACTGTCTCTATCACGAGTTGTAGAGTCCATACCATTCCATTATCTCAAGCGGCCTACACTTTTCATTGATGTATTCTCAGTTAAAAAACATCCAAAAGATGTCCTTTTGCGAATATTGCCTGAGGAATGCGACTTGCTGTGTACTCACCCAATGTTTGGACCACAAAGTGGAAAAGATGGATGGACTGATTTGACTTTTATGTACGACATGATTCGAATTAGAAATAAATCTCTGTGTTCCAGTTTTCTGCAAATATTTTTAAGTGAGGGGTGCAAAATGCTGGAAATGACTTGTGAAGAGCATGATAAATTGGCTGCTCGAAGTCAATTTCTGACTCACATAATTGGCAGGATCTTATCCGAAATGGAGGTTGAACCCACCCCCATAGACACGAAGGGATTTCAGAAACTTGTTCAAGTGAAGGAGAGCTCAGTTAGAGATAGTTTTGATCTATTCAGCGGGCTATTCATACACAATAGGTTTGCCAGGCAACAGATGAAAAATTTAGAAGTAGCAGTGGAGAAAACTAAACAGAAGCTTGAAGAGAGGTCGAAGGAGCTGCAGGATCCTATCATATCTAAGTTCTAG。
mutant TyrA protein (SEQ ID No.4, 243 amino acids):
MIKQGHIIRATSRSDYSDLCANLGILFFRDMGAFLESDNKIIIISTSILSLSRVVESIPFHYLKRPTLFIDVFSVKKHPKDVLLRILPEECDLLCTHPMFGPQSGKDGWTDLTFMYDMIRIRNKSLCSSFLQIFLSEGCKMLEMTCEEHDKLAARSQFLTHIIGRILSEMEVEPTPIDTKGFQKLVQVKESSVRDSFDLFSGLFIHNRFARQQMKNLEVAVEKTKQKLEERSKELQDPIISKF。
example 2
Based on the screening and analysis in example 1, the specific phenotypic change of related mutants is further determined. The mutant pure hybrid plants are further subjected to greenhouse planting and field planting, the tyrosine content of tobacco leaves and the release amount of phenol in smoke are measured, and the specific experimental process is briefly described as follows.
(I) detection of tyrosine content
M4 generation homozygous mutant strain mutant M837 (LH 2), M330 (LH 5), M283 (LH 10) and control material Yunyan 87 (LH 1) are planted in the culture room of the national tobacco gene research center (temperature is 25 +/-2 ℃, 16 h light/8 h dark).
And after the 5 th true leaf grows out, taking down the third true leaf and freeze-drying. Accurately weighing 50mg of lyophilized tobacco powder, placing into 1.5ml EP tube, accurately measuring to 0.0001g, accurately adding 1.6mg/ml leucine brain phenolphthalein methanol solution 1ml, placing in shaking table at 30 deg.C and 200rpm, and oscillating for 30 min; after centrifugation at 14000rpm for 10min, 600. mu.L of the supernatant was carefully collected and assayed by LC-MS (Agilent, 1290-. Detection conditions are as follows:
a chromatographic column: waters BEH Amide, 2.1 × 100mm,1.7 μm;
mobile phase A: acetonitrile solution containing 0.1% formic acid; mobile phase B: an aqueous solution containing 0.1% formic acid;
column temperature: 30 ℃; flow rate: 0.3 mL/min; sample introduction volume: 10 mu L of the solution;
gradient:
0min, mobile phase A5%, mobile phase B95%;
5min, mobile phase A25%, mobile phase B75%;
6min, mobile phase A30% and mobile phase B70%;
7min, mobile phase A25% and mobile phase B75%;
8min, 20% of mobile phase A and 80% of mobile phase B;
10min, mobile phase A5% and mobile phase B95%.
The results of the tyrosine content detection of the mutant tobacco leaves (figure 1) show that compared with the control Yunyan 87, the free tyrosine content in the mutant strains LH2, LH5 and LH10 is greatly reduced by 61.37 percent, 76.78 percent and 81.71 percent respectively. The results show that the cloud 87DHQ-SDH1Genes orTyrAMutation of the gene can obviously reduce the content of Tyr.
(II) detection of protein content
In the greenhouse, after the 5 th true leaf was grown, the third true leaf was removed and the protein content was measured using BCA protein concentration assay kit (Sevin Innovation Biotech Co., Ltd.) according to the kit instructions.
The results of leaf protein content tests on mutant strains showed that the protein content in LH2, LH5 and LH10 decreased by about 7.39%, 8.699% and 21.74%, respectively (fig. 2). This indicates that the cloud 87 wasDHQ-SDH1Genes andTyrAmutation of the gene can effectively reduce the content of leaf protein, probably by inhibiting the synthesis of free Tyr to influence the synthesis of protein content, because Tyr is one of indispensable amino acid components of protein synthesis.
(III) analysis of photo-biological Properties
In the greenhouse, after the 5 th true leaf grows out, the change of the photosynthetic physiological index of the homozygous mutant after being exposed for 4 hours in the sun is detected by using Imaging-PAM (Whole leaf fluorescence Imaging system) of the Germany WALZ company.
The results of measurements of the photosynthetic physiology of the leaves of the mutant lines showed that the maximum photochemical efficiency (Fv/Fm) of photosynthetic system II of the plants remained essentially the same as the control, both before and after normal growth and intense light treatment (FIG. 3). This indicates that although the leaf protein and Tyr content are significantly reduced, the photosynthetic efficiency of the leaf is not significantly interfered, indicating that the site-directed mutation of the gene does not significantly interfere with the normal growth and development of the plant.
(IV) detection of release amount of smoke phenolic substances
M4 generation homozygous lines LH5, LH10 and LH2 corresponding to mutants M330, M283 and M837 and a control material Yunyan 87 (LH 1) are planted in an experimental field of Wanlutown, Xiang county, Henan province, 3 repeated cells are planted in each material, and 20 cigarettes are planted in each cell. The plant spacing is 50 cm, and the row spacing is 120 cm. Topping is carried out when the central flower of the first tobacco plant blooms 50%, and the number of leaves left on each plant is about 22. The field management measures and the baking are carried out according to the local high-quality tobacco leaf cultivation and baking technical regulations.
After the middle leaves of the Yunyan cigarette 87 and the mutant material are mature and picked, the tobacco leaves are baked according to a local high-quality tobacco baking process, the baked tobacco leaves are balanced and then cut into shreds, and the tobacco shred samples are filled into empty cigarettes by using a cigarette beater to prepare sample cigarettes.
Further, after the sample cigarettes are put into a constant temperature and humidity room (temperature is 22 ℃, humidity is 60% RH) to be balanced for 48 hours, cigarettes with weight deviation within the range of +/-20 mg are screened as test cigarettes.
The cigarettes were smoked using an automatic smoking machine (SM 450, CERULEAN, uk), 4 cigarettes were drawn for each sample, the glass fiber filter with the total particulate matter of the mainstream smoke trapped therein was folded and placed in a 200mL conical flask with a stopper, 50mL of 1% acetic acid solution (volume fraction) was added accurately, ultrasonic extraction was carried out at room temperature for 20min, and the flask was allowed to stand for 5 min. 2ml of the extract was filtered through a 0.45 μm aqueous filter. Detection was performed using a high performance liquid chromatograph (WATERS, USA, E2695). Detection conditions are as follows:
mobile phase A: 1% acetic acid solution; mobile phase B: acetic acid-acetonitrile-water (1: 30: 69);
column temperature: 30 ℃; flow rate: 1 mL/min; sample introduction volume: 10 mu L of the solution;
gradient:
0min, mobile phase A80%, mobile phase B20%;
40min, mobile phase A0% and mobile phase B100%.
To pairDHQ-SDH1The results of the measurement of phenol release from mutant cigarettes (fig. 4) show that the phenol release of each mutant cigarette sample is significantly reduced compared to the control cigarette sample. Wherein the LH10 has the largest reduction amplitude, and the reduction rate is 48.99%; LH5 and LH2 decreased by 24.09% and 11.89%, respectively.
The results of testing the release amounts of other 5 phenols in the smoke of the mutant material are shown in fig. 4, and compared with the wild type, the release amounts of phenols in the smoke of the mutant test cigarette are increased except for the release amount of p-benzenediol, and the release amounts of other phenols, such as the release amounts of m-benzenediol, o-benzenediol, p-cresol and o-cresol, are reduced to different degrees. The content of o-dihydroxybenzene in the 5 phenols is the highest, the reduction amplitude is greatly increased than that of the o-dihydroxybenzene, so that the smoke phenolic substance release amount of the mutant material is reduced, and the LH10 is reduced maximally.
Example 3
Based on the embodiment 1 and the embodiment 2, the inventor further constructs tobacco by means of genetic hybridization based on the single mutant determined by screening and in order to further reduce the phenol content in the smoketyra/dhq-sdh1The specific construction process for the double mutant is briefly described below.
It should be explained that, in order to avoid the occurrence of the condition of over-change of tobacco quality and even death after mutation accumulation, the inventors adopted other mutant materials for further research and discussion in the process of constructing the double mutant. Specifically, the method comprises the following steps:
male parent: with selected homozygous mutant tobaccotyra(M846) material as male parent in the mutantTyrAThe 217 th base of the gene is mutated C → T, the corresponding 73 rd amino acid is mutated L → F;
female parent: with selected homozygous mutant tobaccoDHQ-SDH1(M398) material as female parent, in the mutantDHQ- SDH1The 863 th base of the gene is mutated A → G and the corresponding 288 th amino acid is mutated D → G.
The tobacco M846 and M398 mutants were sown simultaneously, and approximately 90 days after sowing, genetic crossing was performed at the time of flowering. Removing redundant buds by taking the M398 mutant as a female parent, selecting unopened buds, removing stamens, collecting pollen of the M846 mutant, smearing the pollen on stigmas of pistils of the M398 mutant, and bagging for reserving seeds. And (4) harvesting the hybrid seeds after the hybrid seeds are mature.
About 30 days after F1 generation, DNA of tobacco was extracted and sequenced, and the DNA contained thereinTyrAAndDHQ-SDH1reserving seeds of two gene mutations;
about 30 days after F2 generation, DNA of tobacco was extracted and sequenced, and the DNA contained thereinTyrAAndDHQ-SDH1reserving seeds of two gene mutations;
about 30 days after F3 sowing, extracting DNA of tobacco, sequencing, and determining the seed reservation of F2 progenyTyrAAndDHQ-SDH1mutation of both genes and harvesting.
When sequencing identification is carried out on the basis of the PCR amplification product, PCR amplification is carried out by using primers DHQ2_ Tilling _ F/R and TyrA _ Tilling _ F/R respectively, the PCR amplification product is subjected to 1% agarose gel electrophoresis, then gel cutting recovery is carried out, and the gel cutting recovery is carried out, connected to a T vector and then sent to Huada gene company for sequencing.
Further, referring to the related planting process in example 2, F4 generation double mutants were planted, and the tyrosine content and phenol release amount of the tobacco leaves were measured.
The result of the tyrosine content detection of the double mutant tobacco leaves (fig. 5) shows that the content of free tyrosine in the mutant strain LH14 is greatly reduced by 85.4% compared with the control Yunyan 87.
The measurement result of the double mutant phenol release amount (fig. 6) shows that the mutant LH14 cigarette sample has significantly reduced phenol release amount compared with the control cigarette sample, wherein the reduction rate of phenol release amount is 49.8%.
SEQUENCE LISTING
<110> Zhengzhou tobacco institute of China tobacco general Co
<120> mutant gene DHQ-SDH1 related to smoke phenol release amount
<130> none
<160> 4
<170> PatentIn version 3.5
<210> 1
<211> 1548
<212> DNA
<213> Nicotiana tabacum
<400> 1
atgggtttca aacaagacct tttagtgtac acaacattag aatgtgaaag cttgtctgaa 60
atggcagctt gtatgcagaa agcaaaagaa gaaggagcag atctagtgga actttgcatt 120
gactctttaa ctttcacaca catttcagaa gttgaacacc ttctcaaaca gaggacttta 180
ccctccatcg tttctttcag gccaaattcg ccgagatatt cttgcagaga aaactggaag 240
aaaacatgct tgcaagttct ggaattggct gttgaattgg acgtcaagtt tgttaaaatt 300
gaccgcaagg ttgcttatga tgaggtcatc tgtgaattaa tgaccaaacg atcgaactgc 360
aagataattg cctctagtca tgtgaatggt ggaaatccta caaaagagag actttgtaat 420
ttaattgcaa acctgcaatc aacaagagca gatatcatca aattagtgat tgatgtagct 480
tatattacag atgttgcacc agtttttcat atgcttacac attgtcaggt gcctctaatt 540
gccagggcag caggagataa aggtcttata agccaactat taggtccaaa atatggtgct 600
ttctttgttt gtggatcttt aggaggcaaa tccaactctg gcttgctagc tttgactagc 660
attaaagacg tttataaact ggaatatgtg aaccaagata ctagagtttt tggcgtaatc 720
tctaatccta ttggccatag caagggccct ctactgcaca accctgcctt tagacataca 780
ggatacaatg gaatatatgt gcctctacta gttgataata tcaaggaatt ttttcgggtc 840
ttctcatgca atgactatgc tggttttagt gttggactcc cacataagga agcagcagta 900
cggtgctgtg atgaagtaga tccacttgct aagtctatag gagctgttaa cacaattata 960
aggagacctt ctgatggcaa gctcattggt tacaatacag attgtgaggc ttgtgcgacg 1020
gcaattgagg atgcacttag agagagacaa aagaccaatg gccatgcatc aaatgtttct 1080
ccaattgctg gaaaattgtt cgtattagtt ggagcaggtg gtgctgggag agctattgct 1140
tttggtgtca aaagtagagg ggcaagggtt gtaatattta accgcaaata cgagagagca 1200
aaagctctgg ccgcagcagt atctggtgaa gccttgccat atgaacaact aaacgatttc 1260
tgccctgaga agggaatgat tcttgcaaat gcttctgctg taggcatgca gccaaggaca 1320
gatcaaactc ctatttccaa ggaggccttg agatcatatg agctagtatt tgatgcagtt 1380
tacacaccta gaaacacgcg gctattgcag gaggctacag aggttggagc tgcagtggtg 1440
ggtggggttg agatgttcgt caggcaggca attggacagt tcaaattgtt caccaatgga 1500
ttagcaccag aagactttat gcggaggatt gtatatgagc aattttga 1548
<210> 2
<211> 515
<212> PRT
<213> Nicotiana tabacum
<400> 2
Met Gly Phe Lys Gln Asp Leu Leu Val Tyr Thr Thr Leu Glu Cys Glu
1 5 10 15
Ser Leu Ser Glu Met Ala Ala Cys Met Gln Lys Ala Lys Glu Glu Gly
20 25 30
Ala Asp Leu Val Glu Leu Cys Ile Asp Ser Leu Thr Phe Thr His Ile
35 40 45
Ser Glu Val Glu His Leu Leu Lys Gln Arg Thr Leu Pro Ser Ile Val
50 55 60
Ser Phe Arg Pro Asn Ser Pro Arg Tyr Ser Cys Arg Glu Asn Trp Lys
65 70 75 80
Lys Thr Cys Leu Gln Val Leu Glu Leu Ala Val Glu Leu Asp Val Lys
85 90 95
Phe Val Lys Ile Asp Arg Lys Val Ala Tyr Asp Glu Val Ile Cys Glu
100 105 110
Leu Met Thr Lys Arg Ser Asn Cys Lys Ile Ile Ala Ser Ser His Val
115 120 125
Asn Gly Gly Asn Pro Thr Lys Glu Arg Leu Cys Asn Leu Ile Ala Asn
130 135 140
Leu Gln Ser Thr Arg Ala Asp Ile Ile Lys Leu Val Ile Asp Val Ala
145 150 155 160
Tyr Ile Thr Asp Val Ala Pro Val Phe His Met Leu Thr His Cys Gln
165 170 175
Val Pro Leu Ile Ala Arg Ala Ala Gly Asp Lys Gly Leu Ile Ser Gln
180 185 190
Leu Leu Gly Pro Lys Tyr Gly Ala Phe Phe Val Cys Gly Ser Leu Gly
195 200 205
Gly Lys Ser Asn Ser Gly Leu Leu Ala Leu Thr Ser Ile Lys Asp Val
210 215 220
Tyr Lys Leu Glu Tyr Val Asn Gln Asp Thr Arg Val Phe Gly Val Ile
225 230 235 240
Ser Asn Pro Ile Gly His Ser Lys Gly Pro Leu Leu His Asn Pro Ala
245 250 255
Phe Arg His Thr Gly Tyr Asn Gly Ile Tyr Val Pro Leu Leu Val Asp
260 265 270
Asn Ile Lys Glu Phe Phe Arg Val Phe Ser Cys Asn Asp Tyr Ala Gly
275 280 285
Phe Ser Val Gly Leu Pro His Lys Glu Ala Ala Val Arg Cys Cys Asp
290 295 300
Glu Val Asp Pro Leu Ala Lys Ser Ile Gly Ala Val Asn Thr Ile Ile
305 310 315 320
Arg Arg Pro Ser Asp Gly Lys Leu Ile Gly Tyr Asn Thr Asp Cys Glu
325 330 335
Ala Cys Ala Thr Ala Ile Glu Asp Ala Leu Arg Glu Arg Gln Lys Thr
340 345 350
Asn Gly His Ala Ser Asn Val Ser Pro Ile Ala Gly Lys Leu Phe Val
355 360 365
Leu Val Gly Ala Gly Gly Ala Gly Arg Ala Ile Ala Phe Gly Val Lys
370 375 380
Ser Arg Gly Ala Arg Val Val Ile Phe Asn Arg Lys Tyr Glu Arg Ala
385 390 395 400
Lys Ala Leu Ala Ala Ala Val Ser Gly Glu Ala Leu Pro Tyr Glu Gln
405 410 415
Leu Asn Asp Phe Cys Pro Glu Lys Gly Met Ile Leu Ala Asn Ala Ser
420 425 430
Ala Val Gly Met Gln Pro Arg Thr Asp Gln Thr Pro Ile Ser Lys Glu
435 440 445
Ala Leu Arg Ser Tyr Glu Leu Val Phe Asp Ala Val Tyr Thr Pro Arg
450 455 460
Asn Thr Arg Leu Leu Gln Glu Ala Thr Glu Val Gly Ala Ala Val Val
465 470 475 480
Gly Gly Val Glu Met Phe Val Arg Gln Ala Ile Gly Gln Phe Lys Leu
485 490 495
Phe Thr Asn Gly Leu Ala Pro Glu Asp Phe Met Arg Arg Ile Val Tyr
500 505 510
Glu Gln Phe
515
<210> 3
<211> 732
<212> DNA
<213> Nicotiana tabacum
<400> 3
atgataaaac aaggccatat aatcagggct acttctagat cagattattc agacttgtgc 60
gcaaatttgg gtatcctatt cttcagggat atgggtgcat ttcttgaatc agacaataag 120
attattataa ttagcacgtc gatactgtct ctatcacgag ttgtagagtc cataccattc 180
cattatctca agcggcctac acttttcatt gatgtattct cagttaaaaa acatccaaaa 240
gatgtccttt tgcgaatatt gcctgaggaa tgcgacttgc tgtgtactca cccaatgttt 300
ggaccacaaa gtggaaaaga tggatggact gatttgactt ttatgtacga catgattcga 360
attagaaata aatctctgtg ttccagtttt ctgcaaatat ttttaagtga ggggtgcaaa 420
atgctggaaa tgacttgtga agagcatgat aaattggctg ctcgaagtca atttctgact 480
cacataattg gcaggatctt atccgaaatg gaggttgaac ccacccccat agacacgaag 540
ggatttcaga aacttgttca agtgaaggag agctcagtta gagatagttt tgatctattc 600
agcgggctat tcatacacaa taggtttgcc aggcaacaga tgaaaaattt agaagtagca 660
gtggagaaaa ctaaacagaa gcttgaagag aggtcgaagg agctgcagga tcctatcata 720
tctaagttct ag 732
<210> 4
<211> 243
<212> PRT
<213> Nicotiana tabacum
<400> 4
Met Ile Lys Gln Gly His Ile Ile Arg Ala Thr Ser Arg Ser Asp Tyr
1 5 10 15
Ser Asp Leu Cys Ala Asn Leu Gly Ile Leu Phe Phe Arg Asp Met Gly
20 25 30
Ala Phe Leu Glu Ser Asp Asn Lys Ile Ile Ile Ile Ser Thr Ser Ile
35 40 45
Leu Ser Leu Ser Arg Val Val Glu Ser Ile Pro Phe His Tyr Leu Lys
50 55 60
Arg Pro Thr Leu Phe Ile Asp Val Phe Ser Val Lys Lys His Pro Lys
65 70 75 80
Asp Val Leu Leu Arg Ile Leu Pro Glu Glu Cys Asp Leu Leu Cys Thr
85 90 95
His Pro Met Phe Gly Pro Gln Ser Gly Lys Asp Gly Trp Thr Asp Leu
100 105 110
Thr Phe Met Tyr Asp Met Ile Arg Ile Arg Asn Lys Ser Leu Cys Ser
115 120 125
Ser Phe Leu Gln Ile Phe Leu Ser Glu Gly Cys Lys Met Leu Glu Met
130 135 140
Thr Cys Glu Glu His Asp Lys Leu Ala Ala Arg Ser Gln Phe Leu Thr
145 150 155 160
His Ile Ile Gly Arg Ile Leu Ser Glu Met Glu Val Glu Pro Thr Pro
165 170 175
Ile Asp Thr Lys Gly Phe Gln Lys Leu Val Gln Val Lys Glu Ser Ser
180 185 190
Val Arg Asp Ser Phe Asp Leu Phe Ser Gly Leu Phe Ile His Asn Arg
195 200 205
Phe Ala Arg Gln Gln Met Lys Asn Leu Glu Val Ala Val Glu Lys Thr
210 215 220
Lys Gln Lys Leu Glu Glu Arg Ser Lys Glu Leu Gln Asp Pro Ile Ile
225 230 235 240
Ser Lys Phe

Claims (6)

1. Mutant gene related to phenol release amount of smokeDHQ-SDH1Characterized in that the mutant geneDHQ-SDH1The base sequence of the mutant gene of tobacco dehydroquinate dehydrogenase/shikimate dehydrogenase is shown in SEQ ID NO. 1.
2. The mutant gene according to claim 1DHQ-SDH1The encoded tobacco DHQ-SHD1 protein is characterized in thatThe amino acid sequence is shown as SEQ ID NO. 2.
3. The mutant gene according to claim 1DHQ-SDH1The application of the protein in the regulation and control of the tyrosine substance content or the smoke phenol release amount of the tobacco leaves is characterized in that the biological technology method is utilized to regulate the tobacco leavesDHQ-SDH1The gene expression level, and further the expression level of the DHQ-SHD1 protein of the tobacco is regulated, so that the tyrosine substance content and the smoke phenol release amount in the tobacco leaves are regulated and controlled.
4. The use of the tobacco DHQ-SHD1 protein of claim 2 for the control of tobacco leaf tyrosine content or smoke phenol release by adjusting the tobacco leaf tyrosine content or smoke phenol release by a biotechnological methodDHQ-SDH1The gene expression level, and further the expression level of the DHQ-SHD1 protein of the tobacco is regulated, so that the tyrosine substance content and the smoke phenol release amount in the tobacco leaves are regulated and controlled.
5. Tobaccotyra/dhq-sdh1The method for breeding the new tobacco variety with double mutants is characterized in that the new tobacco variety contains mutant genesTyrATobacco and tobacco containing mutant geneDHQ-SDH1The tobacco is selected as parent and obtained by genetic hybridizationtyra/dhq-sdh1Double mutant homozygotes.
6. The tobacco of claim 5tyra/dhq-sdh1The method for breeding the new tobacco variety with double mutants is characterized in that the mutant geneTyrAIn this mutant, compared with the wild typeTyrAThe 217 th base of the gene is mutated C → T, the corresponding 73 rd amino acid is mutated L → F;
the mutant geneDHQ-SDH1In this mutant, compared with the wild typeDHQ-SDH1The 863 th base of the gene is mutated A → G and the corresponding 288 th amino acid is mutated D → G;
and (3) during genetic hybridization: to be provided withdhq-sdh1The mutant is the female parent, andtyrathe mutant is a male parent.
CN202110480149.4A 2021-04-30 2021-04-30 Mutant gene DHQ-SDH1 related to smoke phenol release amount Active CN113174395B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN202110480149.4A CN113174395B (en) 2021-04-30 2021-04-30 Mutant gene DHQ-SDH1 related to smoke phenol release amount

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN202110480149.4A CN113174395B (en) 2021-04-30 2021-04-30 Mutant gene DHQ-SDH1 related to smoke phenol release amount

Publications (2)

Publication Number Publication Date
CN113174395A true CN113174395A (en) 2021-07-27
CN113174395B CN113174395B (en) 2022-06-24

Family

ID=76925794

Family Applications (1)

Application Number Title Priority Date Filing Date
CN202110480149.4A Active CN113174395B (en) 2021-04-30 2021-04-30 Mutant gene DHQ-SDH1 related to smoke phenol release amount

Country Status (1)

Country Link
CN (1) CN113174395B (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113549639A (en) * 2021-07-21 2021-10-26 云南中烟工业有限责任公司 Regulatory gene for reducing content of total protein and smoke phenol in tobacco leaves

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN1360637A (en) * 1999-04-12 2002-07-24 孟山都技术有限责任公司 Transgenic plants contg. altered levels of sterol compounds and tocopherols
US20030145348A1 (en) * 2000-07-07 2003-07-31 Annette Freund Dehydroquinate dehydrase/shikimate dehydrogenase as a herbicide target
CN104120119A (en) * 2013-04-28 2014-10-29 上海医药工业研究院 3-dehydroquinic acid synthase mutant as well gene and application thereof

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN1360637A (en) * 1999-04-12 2002-07-24 孟山都技术有限责任公司 Transgenic plants contg. altered levels of sterol compounds and tocopherols
US20030145348A1 (en) * 2000-07-07 2003-07-31 Annette Freund Dehydroquinate dehydrase/shikimate dehydrogenase as a herbicide target
CN104120119A (en) * 2013-04-28 2014-10-29 上海医药工业研究院 3-dehydroquinic acid synthase mutant as well gene and application thereof

Non-Patent Citations (7)

* Cited by examiner, † Cited by third party
Title
KO TAHARA ET AL.: "Dehydroquinate dehydratase/shikimate dehydrogenases involved in gallate biosynthesis of the aluminum-tolerant tree species Eucalyptus camaldulensis", 《PLANTA》 *
LI DING ET AL.: "Functional analysis of the essential bifunctional tobacco enzyme 3-dehydroquinate dehydratase/shikimate dehydrogenase in transgenic tobacco plants", 《JOURNAL OF EXPERIMENTAL BOTANY》 *
NONE: "PREDICTED: Nicotiana tomentosiformis bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like (LOC104085456), transcript variant X2, mRNA,Accession NO:XM_009589489.3", 《GENBANK》 *
SASHA ANNA SINGH ET AL.: "Structure of Arabidopsis Dehydroquinate Dehydratase-Shikimate Dehydrogenase and Implications for Metabolic Channeling in the Shikimate Pathway", 《BIOCHEMISTRY》 *
张林等: "普通烟草DHQ-SDH基因家族分析", 《烟草科技》 *
王大伟等: "卷烟烟气苯酚释放影响因素及其调控技术研究进展", 《烟草科技》 *
陈园等: "微生物莽草酸代谢途径的研究进展", 《江苏农业科学》 *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113549639A (en) * 2021-07-21 2021-10-26 云南中烟工业有限责任公司 Regulatory gene for reducing content of total protein and smoke phenol in tobacco leaves

Also Published As

Publication number Publication date
CN113174395B (en) 2022-06-24

Similar Documents

Publication Publication Date Title
US10611808B2 (en) Isolated polypeptides and polynucleotides encoding same for generating plants with increased cuticlar water permeability
CN101124325A (en) Regulator for flowering time, transgenic plant transformed with the same, and method for regulating flowering time
CN102776201B (en) Application of OsELF 3 gene in controlling heading stage of paddy rice
CN111440780B (en) Paeonia ostii PoCCoAOMT gene cDNA full-length sequence and application thereof in plant drought resistance
US20220142228A1 (en) Tobacco plants having increased nitrogen efficiency and methods of using such plants
CN114250233B (en) Application of arabidopsis calcium ion channel gene AtCNGC3 in sclerotinia sclerotiorum prevention and control
CN113061619B (en) Mutant gene TyrA related to phenol release amount of smoke
CN113174395B (en) Mutant gene DHQ-SDH1 related to smoke phenol release amount
CN108003227B (en) Rice early flowering time related protein and coding gene thereof
JP6191996B2 (en) Participatory outcome control genes and their use
US10584349B2 (en) Nucleotide sequences encoding fasciated EAR3 (FEA3) and methods of use thereof
CN114829587A (en) Regulating reducing sugar content (INV) in plants
WO2014178420A1 (en) Onion which have less pungent taste and does not form lachrymatory factor
CN110642930B (en) Gene for regulating and controlling tillering number of corn, and encoded protein and application thereof
CN116157526A (en) Improving productivity of C3 plants
Hamano et al. Reduction of Lateral Shoots by RNA Interference and by Chemical Mutation of Genes Involved in Axillary Meristem Regulation and Field Trials of Mutant Lines in Nicotiana Tabacum L.
WO2021146585A1 (en) Methods and compositions related to improved nitrogen use efficiency
WO2023020938A1 (en) Lettuce plant having delayed bolting
WO2020260890A1 (en) Increasing water use efficiency in plants
CN114908106A (en) Rose salt-tolerant gene RrLBD40 and application thereof
Yordem Establishing Brachypodium distachyon as a new model system for understanding iron homeostasis in grasses

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant