CN113164506A - Dinucleotide compounds and prodrugs thereof - Google Patents
Dinucleotide compounds and prodrugs thereof Download PDFInfo
- Publication number
- CN113164506A CN113164506A CN201980079681.6A CN201980079681A CN113164506A CN 113164506 A CN113164506 A CN 113164506A CN 201980079681 A CN201980079681 A CN 201980079681A CN 113164506 A CN113164506 A CN 113164506A
- Authority
- CN
- China
- Prior art keywords
- compound
- alkyl
- methyl
- tetrahydrofuran
- pharmaceutically acceptable
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 150000001875 compounds Chemical class 0.000 title claims abstract description 109
- 239000000651 prodrug Substances 0.000 title abstract description 5
- 229940002612 prodrug Drugs 0.000 title abstract description 5
- 150000003839 salts Chemical class 0.000 claims abstract description 34
- 239000008194 pharmaceutical composition Substances 0.000 claims abstract description 25
- 208000019423 liver disease Diseases 0.000 claims abstract description 5
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 claims description 60
- -1 C2-6Alkenyl radical Chemical class 0.000 claims description 57
- 150000003254 radicals Chemical class 0.000 claims description 25
- 241000124008 Mammalia Species 0.000 claims description 23
- 125000000592 heterocycloalkyl group Chemical group 0.000 claims description 21
- 125000005913 (C3-C6) cycloalkyl group Chemical group 0.000 claims description 16
- 208000015181 infectious disease Diseases 0.000 claims description 15
- 125000001313 C5-C10 heteroaryl group Chemical group 0.000 claims description 14
- 229910052736 halogen Inorganic materials 0.000 claims description 13
- 150000002367 halogens Chemical class 0.000 claims description 13
- 125000000217 alkyl group Chemical group 0.000 claims description 11
- 238000000034 method Methods 0.000 claims description 11
- 239000003814 drug Substances 0.000 claims description 8
- 230000002265 prevention Effects 0.000 claims description 8
- 239000002671 adjuvant Substances 0.000 claims description 7
- 125000003601 C2-C6 alkynyl group Chemical group 0.000 claims description 6
- QGZKDVFQNNGYKY-UHFFFAOYSA-O Ammonium Chemical compound [NH4+] QGZKDVFQNNGYKY-UHFFFAOYSA-O 0.000 claims description 5
- 125000006376 (C3-C10) cycloalkyl group Chemical group 0.000 claims description 4
- 125000006584 (C3-C10) heterocycloalkyl group Chemical group 0.000 claims description 4
- 230000002401 inhibitory effect Effects 0.000 claims description 4
- 238000006467 substitution reaction Methods 0.000 claims description 4
- PXGOKWXKJXAPGV-UHFFFAOYSA-N Fluorine Chemical compound FF PXGOKWXKJXAPGV-UHFFFAOYSA-N 0.000 claims description 3
- 229910052783 alkali metal Inorganic materials 0.000 claims description 3
- 229910052731 fluorine Inorganic materials 0.000 claims description 3
- 239000011737 fluorine Substances 0.000 claims description 3
- 125000000882 C2-C6 alkenyl group Chemical group 0.000 claims description 2
- 150000001768 cations Chemical class 0.000 claims description 2
- 229940037201 oris Drugs 0.000 claims 4
- 238000004519 manufacturing process Methods 0.000 claims 1
- 208000002672 hepatitis B Diseases 0.000 abstract description 5
- 238000002360 preparation method Methods 0.000 abstract description 3
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 75
- 238000006243 chemical reaction Methods 0.000 description 45
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 40
- 239000000243 solution Substances 0.000 description 38
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 32
- YMWUJEATGCHHMB-UHFFFAOYSA-N Dichloromethane Chemical compound ClCCl YMWUJEATGCHHMB-UHFFFAOYSA-N 0.000 description 30
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 27
- 238000005160 1H NMR spectroscopy Methods 0.000 description 25
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 24
- 239000000203 mixture Substances 0.000 description 24
- RYYWUUFWQRZTIU-UHFFFAOYSA-K thiophosphate Chemical compound [O-]P([O-])([O-])=S RYYWUUFWQRZTIU-UHFFFAOYSA-K 0.000 description 23
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 description 22
- VLKZOEOYAKHREP-UHFFFAOYSA-N n-Hexane Chemical compound CCCCCC VLKZOEOYAKHREP-UHFFFAOYSA-N 0.000 description 22
- 239000008346 aqueous phase Substances 0.000 description 18
- 201000010099 disease Diseases 0.000 description 18
- 125000004432 carbon atom Chemical group C* 0.000 description 16
- 238000004366 reverse phase liquid chromatography Methods 0.000 description 15
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 14
- 241000700721 Hepatitis B virus Species 0.000 description 14
- 239000012043 crude product Substances 0.000 description 13
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 description 12
- LFGREXWGYUGZLY-UHFFFAOYSA-N phosphoryl Chemical group [P]=O LFGREXWGYUGZLY-UHFFFAOYSA-N 0.000 description 12
- 238000000746 purification Methods 0.000 description 12
- 125000000446 sulfanediyl group Chemical group *S* 0.000 description 12
- RTZKZFJDLAIYFH-UHFFFAOYSA-N Diethyl ether Chemical compound CCOCC RTZKZFJDLAIYFH-UHFFFAOYSA-N 0.000 description 11
- IAZDPXIOMUYVGZ-UHFFFAOYSA-N Dimethylsulphoxide Chemical compound CS(C)=O IAZDPXIOMUYVGZ-UHFFFAOYSA-N 0.000 description 10
- 238000004440 column chromatography Methods 0.000 description 9
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical compound [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 8
- 239000011259 mixed solution Substances 0.000 description 8
- 239000012074 organic phase Substances 0.000 description 7
- ZMXDDKWLCZADIW-UHFFFAOYSA-N N,N-Dimethylformamide Chemical compound CN(C)C=O ZMXDDKWLCZADIW-UHFFFAOYSA-N 0.000 description 6
- IMNFDUFMRHMDMM-UHFFFAOYSA-N N-Heptane Chemical compound CCCCCCC IMNFDUFMRHMDMM-UHFFFAOYSA-N 0.000 description 6
- PMZURENOXWZQFD-UHFFFAOYSA-L Sodium Sulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=O PMZURENOXWZQFD-UHFFFAOYSA-L 0.000 description 6
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 6
- 125000003118 aryl group Chemical group 0.000 description 6
- 239000003153 chemical reaction reagent Substances 0.000 description 6
- 125000000555 isopropenyl group Chemical group [H]\C([H])=C(\*)C([H])([H])[H] 0.000 description 6
- 238000000926 separation method Methods 0.000 description 6
- 239000007787 solid Substances 0.000 description 6
- VEPTXBCIDSFGBF-UHFFFAOYSA-M tetrabutylazanium;fluoride;trihydrate Chemical compound O.O.O.[F-].CCCC[N+](CCCC)(CCCC)CCCC VEPTXBCIDSFGBF-UHFFFAOYSA-M 0.000 description 6
- FKNQFGJONOIPTF-UHFFFAOYSA-N Sodium cation Chemical compound [Na+] FKNQFGJONOIPTF-UHFFFAOYSA-N 0.000 description 5
- 229960000583 acetic acid Drugs 0.000 description 5
- 229940079593 drug Drugs 0.000 description 5
- 125000005842 heteroatom Chemical group 0.000 description 5
- RCIJMMSZBQEWKW-UHFFFAOYSA-N methyl propan-2-yl carbonate Chemical compound COC(=O)OC(C)C RCIJMMSZBQEWKW-UHFFFAOYSA-N 0.000 description 5
- 239000000546 pharmaceutical excipient Substances 0.000 description 5
- 229920006395 saturated elastomer Polymers 0.000 description 5
- 229910001415 sodium ion Inorganic materials 0.000 description 5
- 239000000758 substrate Substances 0.000 description 5
- GQHTUMJGOHRCHB-UHFFFAOYSA-N 2,3,4,6,7,8,9,10-octahydropyrimido[1,2-a]azepine Chemical compound C1CCCCN2CCCN=C21 GQHTUMJGOHRCHB-UHFFFAOYSA-N 0.000 description 4
- VHUUQVKOLVNVRT-UHFFFAOYSA-N Ammonium hydroxide Chemical compound [NH4+].[OH-] VHUUQVKOLVNVRT-UHFFFAOYSA-N 0.000 description 4
- ISAKRJDGNUQOIC-UHFFFAOYSA-N Uracil Chemical compound O=C1C=CNC(=O)N1 ISAKRJDGNUQOIC-UHFFFAOYSA-N 0.000 description 4
- QGZKDVFQNNGYKY-UHFFFAOYSA-N ammonia Natural products N QGZKDVFQNNGYKY-UHFFFAOYSA-N 0.000 description 4
- 150000003863 ammonium salts Chemical class 0.000 description 4
- 208000035475 disorder Diseases 0.000 description 4
- 238000002474 experimental method Methods 0.000 description 4
- 238000001914 filtration Methods 0.000 description 4
- 125000001072 heteroaryl group Chemical group 0.000 description 4
- 239000000463 material Substances 0.000 description 4
- 229910052760 oxygen Inorganic materials 0.000 description 4
- 239000011541 reaction mixture Substances 0.000 description 4
- 125000006413 ring segment Chemical group 0.000 description 4
- 235000017557 sodium bicarbonate Nutrition 0.000 description 4
- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 4
- HPALAKNZSZLMCH-UHFFFAOYSA-M sodium;chloride;hydrate Chemical class O.[Na+].[Cl-] HPALAKNZSZLMCH-UHFFFAOYSA-M 0.000 description 4
- 229910052717 sulfur Chemical group 0.000 description 4
- 239000006228 supernatant Substances 0.000 description 4
- 125000004192 tetrahydrofuran-2-yl group Chemical group [H]C1([H])OC([H])(*)C([H])([H])C1([H])[H] 0.000 description 4
- DNCYBUMDUBHIJZ-UHFFFAOYSA-N 1h-pyrimidin-6-one Chemical compound O=C1C=CN=CN1 DNCYBUMDUBHIJZ-UHFFFAOYSA-N 0.000 description 3
- ZMANZCXQSJIPKH-UHFFFAOYSA-N Triethylamine Chemical compound CCN(CC)CC ZMANZCXQSJIPKH-UHFFFAOYSA-N 0.000 description 3
- 239000008367 deionised water Substances 0.000 description 3
- 229910021641 deionized water Inorganic materials 0.000 description 3
- MROCJMGDEKINLD-UHFFFAOYSA-N dichlorosilane Chemical compound Cl[SiH2]Cl MROCJMGDEKINLD-UHFFFAOYSA-N 0.000 description 3
- 239000002552 dosage form Substances 0.000 description 3
- 230000000694 effects Effects 0.000 description 3
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 3
- 125000004435 hydrogen atom Chemical group [H]* 0.000 description 3
- 238000002156 mixing Methods 0.000 description 3
- IJGRMHOSHXDMSA-UHFFFAOYSA-N nitrogen Substances N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 3
- 239000011734 sodium Substances 0.000 description 3
- 125000001424 substituent group Chemical group 0.000 description 3
- 239000000725 suspension Substances 0.000 description 3
- 208000024891 symptom Diseases 0.000 description 3
- 238000003786 synthesis reaction Methods 0.000 description 3
- 239000003826 tablet Substances 0.000 description 3
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 3
- YVYKKLNOXPCFGC-PMFUCWTESA-N 1-[(2r,3r,4r,5r)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-hydroxy-3-(2-methoxyethoxy)oxolan-2-yl]pyrimidine-2,4-dione Chemical compound C([C@@H]1[C@@H](O)[C@H]([C@@H](O1)N1C(NC(=O)C=C1)=O)OCCOC)OC(C=1C=CC(OC)=CC=1)(C=1C=CC(OC)=CC=1)C1=CC=CC=C1 YVYKKLNOXPCFGC-PMFUCWTESA-N 0.000 description 2
- KJUGUADJHNHALS-UHFFFAOYSA-N 1H-tetrazole Chemical compound C=1N=NNN=1 KJUGUADJHNHALS-UHFFFAOYSA-N 0.000 description 2
- 125000003903 2-propenyl group Chemical group [H]C([*])([H])C([H])=C([H])[H] 0.000 description 2
- PQWDATLZEFPKGE-UHFFFAOYSA-N 2-sulfanylideneoxathiolane Chemical compound S=S1CCCO1 PQWDATLZEFPKGE-UHFFFAOYSA-N 0.000 description 2
- VHYFNPMBLIVWCW-UHFFFAOYSA-N 4-Dimethylaminopyridine Chemical compound CN(C)C1=CC=NC=C1 VHYFNPMBLIVWCW-UHFFFAOYSA-N 0.000 description 2
- 241000282414 Homo sapiens Species 0.000 description 2
- BZLVMXJERCGZMT-UHFFFAOYSA-N Methyl tert-butyl ether Chemical compound COC(C)(C)C BZLVMXJERCGZMT-UHFFFAOYSA-N 0.000 description 2
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 2
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical group [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 description 2
- 125000001931 aliphatic group Chemical group 0.000 description 2
- 125000003342 alkenyl group Chemical group 0.000 description 2
- 125000003545 alkoxy group Chemical group 0.000 description 2
- 125000000304 alkynyl group Chemical group 0.000 description 2
- 125000004429 atom Chemical group 0.000 description 2
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical group [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 description 2
- 230000008901 benefit Effects 0.000 description 2
- 230000004071 biological effect Effects 0.000 description 2
- 230000037396 body weight Effects 0.000 description 2
- 239000002775 capsule Substances 0.000 description 2
- 229910052799 carbon Inorganic materials 0.000 description 2
- 230000003833 cell viability Effects 0.000 description 2
- 125000000753 cycloalkyl group Chemical group 0.000 description 2
- 238000011161 development Methods 0.000 description 2
- JXTHNDFMNIQAHM-UHFFFAOYSA-N dichloroacetic acid Chemical compound OC(=O)C(Cl)Cl JXTHNDFMNIQAHM-UHFFFAOYSA-N 0.000 description 2
- 238000010790 dilution Methods 0.000 description 2
- 239000012895 dilution Substances 0.000 description 2
- 239000008298 dragée Substances 0.000 description 2
- 238000009472 formulation Methods 0.000 description 2
- 239000000499 gel Substances 0.000 description 2
- 239000008187 granular material Substances 0.000 description 2
- 239000001963 growth medium Substances 0.000 description 2
- 125000005843 halogen group Chemical group 0.000 description 2
- 125000002883 imidazolyl group Chemical group 0.000 description 2
- 238000000338 in vitro Methods 0.000 description 2
- 230000005764 inhibitory process Effects 0.000 description 2
- 239000003456 ion exchange resin Substances 0.000 description 2
- 229920003303 ion-exchange polymer Polymers 0.000 description 2
- 239000007788 liquid Substances 0.000 description 2
- BHIWKHZACMWKOJ-UHFFFAOYSA-N methyl isobutyrate Chemical compound COC(=O)C(C)C BHIWKHZACMWKOJ-UHFFFAOYSA-N 0.000 description 2
- 229910000402 monopotassium phosphate Inorganic materials 0.000 description 2
- 235000019796 monopotassium phosphate Nutrition 0.000 description 2
- 229910052757 nitrogen Inorganic materials 0.000 description 2
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 description 2
- 239000001301 oxygen Chemical group 0.000 description 2
- 239000012071 phase Substances 0.000 description 2
- PJNZPQUBCPKICU-UHFFFAOYSA-N phosphoric acid;potassium Chemical compound [K].OP(O)(O)=O PJNZPQUBCPKICU-UHFFFAOYSA-N 0.000 description 2
- 239000006187 pill Substances 0.000 description 2
- 125000006239 protecting group Chemical group 0.000 description 2
- 239000000523 sample Substances 0.000 description 2
- 239000002904 solvent Substances 0.000 description 2
- 125000003003 spiro group Chemical group 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 239000011593 sulfur Chemical group 0.000 description 2
- 238000010189 synthetic method Methods 0.000 description 2
- 125000000037 tert-butyldiphenylsilyl group Chemical group [H]C1=C([H])C([H])=C([H])C([H])=C1[Si]([H])([*]C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 2
- 238000012360 testing method Methods 0.000 description 2
- CXWXQJXEFPUFDZ-UHFFFAOYSA-N tetralin Chemical compound C1=CC=C2CCCCC2=C1 CXWXQJXEFPUFDZ-UHFFFAOYSA-N 0.000 description 2
- 231100000419 toxicity Toxicity 0.000 description 2
- 230000001988 toxicity Effects 0.000 description 2
- IVTHSFJXIARUFL-UHFFFAOYSA-N triazanium;thiophosphate Chemical compound [NH4+].[NH4+].[NH4+].[O-]P([O-])([O-])=S IVTHSFJXIARUFL-UHFFFAOYSA-N 0.000 description 2
- 229930007450 (4R)-limonene 1beta,2beta-epoxide Natural products 0.000 description 1
- JUDOLRSMWHVKGX-UHFFFAOYSA-N 1,1-dioxo-1$l^{6},2-benzodithiol-3-one Chemical compound C1=CC=C2C(=O)SS(=O)(=O)C2=C1 JUDOLRSMWHVKGX-UHFFFAOYSA-N 0.000 description 1
- ILWJAOPQHOZXAN-UHFFFAOYSA-N 1,3-dithianyl Chemical group [CH]1SCCCS1 ILWJAOPQHOZXAN-UHFFFAOYSA-N 0.000 description 1
- 125000005940 1,4-dioxanyl group Chemical group 0.000 description 1
- HKDFRDIIELOLTJ-UHFFFAOYSA-N 1,4-dithianyl Chemical group [CH]1CSCCS1 HKDFRDIIELOLTJ-UHFFFAOYSA-N 0.000 description 1
- CRXIAIRTSFTHDQ-VNSJUHMKSA-N 1-[(2R,3R,4R,5R)-5-[[tert-butyl(diphenyl)silyl]oxymethyl]-4-hydroxy-3-(2-methoxyethoxy)oxolan-2-yl]pyrimidine-2,4-dione Chemical compound CC(C)(C)[Si](C1=CC=CC=C1)(C2=CC=CC=C2)OC[C@@H]3[C@H]([C@H]([C@@H](O3)N4C=CC(=O)NC4=O)OCCOC)O CRXIAIRTSFTHDQ-VNSJUHMKSA-N 0.000 description 1
- JBWYRBLDOOOJEU-UHFFFAOYSA-N 1-[chloro-(4-methoxyphenyl)-phenylmethyl]-4-methoxybenzene Chemical compound C1=CC(OC)=CC=C1C(Cl)(C=1C=CC(OC)=CC=1)C1=CC=CC=C1 JBWYRBLDOOOJEU-UHFFFAOYSA-N 0.000 description 1
- 125000004973 1-butenyl group Chemical group C(=CCC)* 0.000 description 1
- 125000006017 1-propenyl group Chemical group 0.000 description 1
- 125000000530 1-propynyl group Chemical group [H]C([H])([H])C#C* 0.000 description 1
- WUUDRRQMJGPHKK-UHFFFAOYSA-N 2,2-dimethylpropyl iodomethyl carbonate Chemical compound CC(C)(C)COC(=O)OCI WUUDRRQMJGPHKK-UHFFFAOYSA-N 0.000 description 1
- KTKVOCOSCNLKQX-UHFFFAOYSA-N 2,2-dimethylpropyl methyl carbonate Chemical compound COC(=O)OCC(C)(C)C KTKVOCOSCNLKQX-UHFFFAOYSA-N 0.000 description 1
- SPJIZXGYGWKMMZ-UHFFFAOYSA-N 2-cyanoethyl bis[di(propan-2-yl)amino] phosphate Chemical compound C(C)(C)N(C(C)C)OP(=O)(ON(C(C)C)C(C)C)OCCC#N SPJIZXGYGWKMMZ-UHFFFAOYSA-N 0.000 description 1
- IXNATRHCFGRTMH-UHFFFAOYSA-N 2-ethylbutyl methyl carbonate Chemical compound CCC(CC)COC(=O)OC IXNATRHCFGRTMH-UHFFFAOYSA-N 0.000 description 1
- 125000004493 2-methylbut-1-yl group Chemical group CC(C*)CC 0.000 description 1
- 125000005916 2-methylpentyl group Chemical group 0.000 description 1
- 125000001494 2-propynyl group Chemical group [H]C#CC([H])([H])* 0.000 description 1
- ZCYVEMRRCGMTRW-UHFFFAOYSA-N 7553-56-2 Chemical compound [I] ZCYVEMRRCGMTRW-UHFFFAOYSA-N 0.000 description 1
- HBAQYPYDRFILMT-UHFFFAOYSA-N 8-[3-(1-cyclopropylpyrazol-4-yl)-1H-pyrazolo[4,3-d]pyrimidin-5-yl]-3-methyl-3,8-diazabicyclo[3.2.1]octan-2-one Chemical class C1(CC1)N1N=CC(=C1)C1=NNC2=C1N=C(N=C2)N1C2C(N(CC1CC2)C)=O HBAQYPYDRFILMT-UHFFFAOYSA-N 0.000 description 1
- WKBOTKDWSSQWDR-UHFFFAOYSA-N Bromine atom Chemical compound [Br] WKBOTKDWSSQWDR-UHFFFAOYSA-N 0.000 description 1
- SVWXIQXBZHKBIV-UHFFFAOYSA-N CCC(CC)COC(=O)OCI Chemical compound CCC(CC)COC(=O)OCI SVWXIQXBZHKBIV-UHFFFAOYSA-N 0.000 description 1
- KOQNUFAAYXWDAU-UHFFFAOYSA-N CCC(CCCI)OC(=O)O Chemical compound CCC(CCCI)OC(=O)O KOQNUFAAYXWDAU-UHFFFAOYSA-N 0.000 description 1
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical group [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 1
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical compound [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 description 1
- 208000000419 Chronic Hepatitis B Diseases 0.000 description 1
- CCEFMUBVSUDRLG-KXUCPTDWSA-N D-limonene 1,2-Epoxide Chemical compound C1[C@H](C(=C)C)CC[C@@]2(C)O[C@H]21 CCEFMUBVSUDRLG-KXUCPTDWSA-N 0.000 description 1
- JYFHYPJRHGVZDY-UHFFFAOYSA-N Dibutyl phosphate Chemical compound CCCCOP(O)(=O)OCCCC JYFHYPJRHGVZDY-UHFFFAOYSA-N 0.000 description 1
- 206010059866 Drug resistance Diseases 0.000 description 1
- 208000030453 Drug-Related Side Effects and Adverse reaction Diseases 0.000 description 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 1
- 108010010803 Gelatin Proteins 0.000 description 1
- DGAQECJNVWCQMB-PUAWFVPOSA-M Ilexoside XXIX Chemical compound C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OS(=O)(=O)[O-])C)C)[C@@H]2[C@]1(C)O)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O.[Na+] DGAQECJNVWCQMB-PUAWFVPOSA-M 0.000 description 1
- 102000006992 Interferon-alpha Human genes 0.000 description 1
- 108010047761 Interferon-alpha Proteins 0.000 description 1
- 241000701076 Macacine alphaherpesvirus 1 Species 0.000 description 1
- FYYHWMGAXLPEAU-UHFFFAOYSA-N Magnesium Chemical compound [Mg] FYYHWMGAXLPEAU-UHFFFAOYSA-N 0.000 description 1
- 241001465754 Metazoa Species 0.000 description 1
- PPECKLZLOWWJSJ-UHFFFAOYSA-N N,N-diethylethanamine hydroxy-(2,3,4,5,6-pentafluorophenoxy)-(2,3,4,5,6-pentafluorophenyl)sulfanyl-sulfanylidene-lambda5-phosphane Chemical compound CCN(CC)CC.C1(=C(C(=C(C(=C1F)F)F)F)F)OP(=S)(O)SC2=C(C(=C(C(=C2F)F)F)F)F PPECKLZLOWWJSJ-UHFFFAOYSA-N 0.000 description 1
- 108091034117 Oligonucleotide Proteins 0.000 description 1
- 238000011529 RT qPCR Methods 0.000 description 1
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical class [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 1
- 206010070863 Toxicity to various agents Diseases 0.000 description 1
- 238000010521 absorption reaction Methods 0.000 description 1
- 230000002378 acidificating effect Effects 0.000 description 1
- 239000004480 active ingredient Substances 0.000 description 1
- 125000005073 adamantyl group Chemical group C12(CC3CC(CC(C1)C3)C2)* 0.000 description 1
- 239000000443 aerosol Substances 0.000 description 1
- 229910052784 alkaline earth metal Inorganic materials 0.000 description 1
- 125000003282 alkyl amino group Chemical group 0.000 description 1
- 125000004390 alkyl sulfonyl group Chemical group 0.000 description 1
- 125000004414 alkyl thio group Chemical group 0.000 description 1
- 208000026935 allergic disease Diseases 0.000 description 1
- HSFWRNGVRCDJHI-UHFFFAOYSA-N alpha-acetylene Natural products C#C HSFWRNGVRCDJHI-UHFFFAOYSA-N 0.000 description 1
- AZDRQVAHHNSJOQ-UHFFFAOYSA-N alumane Chemical class [AlH3] AZDRQVAHHNSJOQ-UHFFFAOYSA-N 0.000 description 1
- 150000001412 amines Chemical class 0.000 description 1
- 150000001413 amino acids Chemical class 0.000 description 1
- 125000002178 anthracenyl group Chemical group C1(=CC=CC2=CC3=CC=CC=C3C=C12)* 0.000 description 1
- 230000000840 anti-viral effect Effects 0.000 description 1
- 239000007864 aqueous solution Substances 0.000 description 1
- 238000003556 assay Methods 0.000 description 1
- 125000003725 azepanyl group Chemical group 0.000 description 1
- 125000002393 azetidinyl group Chemical group 0.000 description 1
- 230000004888 barrier function Effects 0.000 description 1
- KXDAEFPNCMNJSK-UHFFFAOYSA-N benzene carboxamide Natural products NC(=O)C1=CC=CC=C1 KXDAEFPNCMNJSK-UHFFFAOYSA-N 0.000 description 1
- 125000000499 benzofuranyl group Chemical group O1C(=CC2=C1C=CC=C2)* 0.000 description 1
- 125000004196 benzothienyl group Chemical group S1C(=CC2=C1C=CC=C2)* 0.000 description 1
- 239000011230 binding agent Substances 0.000 description 1
- 230000015572 biosynthetic process Effects 0.000 description 1
- 239000008280 blood Substances 0.000 description 1
- 210000004369 blood Anatomy 0.000 description 1
- GDTBXPJZTBHREO-UHFFFAOYSA-N bromine Substances BrBr GDTBXPJZTBHREO-UHFFFAOYSA-N 0.000 description 1
- 229910052794 bromium Inorganic materials 0.000 description 1
- 125000001589 carboacyl group Chemical group 0.000 description 1
- 150000001720 carbohydrates Chemical class 0.000 description 1
- 235000014633 carbohydrates Nutrition 0.000 description 1
- 150000001721 carbon Chemical group 0.000 description 1
- 239000012069 chiral reagent Substances 0.000 description 1
- 239000000460 chlorine Substances 0.000 description 1
- 229910052801 chlorine Inorganic materials 0.000 description 1
- 230000001684 chronic effect Effects 0.000 description 1
- 208000019425 cirrhosis of liver Diseases 0.000 description 1
- 238000007906 compression Methods 0.000 description 1
- 230000006835 compression Effects 0.000 description 1
- 125000004122 cyclic group Chemical group 0.000 description 1
- 125000001995 cyclobutyl group Chemical group [H]C1([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 1
- 125000001511 cyclopentyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 1
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 description 1
- DXHGYWRPWKQNNY-UHFFFAOYSA-N cyclopropylmethyl iodomethyl carbonate Chemical compound ICOC(=O)OCC1CC1 DXHGYWRPWKQNNY-UHFFFAOYSA-N 0.000 description 1
- 238000002784 cytotoxicity assay Methods 0.000 description 1
- 231100000263 cytotoxicity test Toxicity 0.000 description 1
- 230000002354 daily effect Effects 0.000 description 1
- 230000001934 delay Effects 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 125000004663 dialkyl amino group Chemical group 0.000 description 1
- 229960005215 dichloroacetic acid Drugs 0.000 description 1
- 239000003085 diluting agent Substances 0.000 description 1
- 239000007884 disintegrant Substances 0.000 description 1
- 238000001035 drying Methods 0.000 description 1
- 239000003480 eluent Substances 0.000 description 1
- 230000001804 emulsifying effect Effects 0.000 description 1
- 239000000839 emulsion Substances 0.000 description 1
- SRCZQMGIVIYBBJ-UHFFFAOYSA-N ethoxyethane;ethyl acetate Chemical compound CCOCC.CCOC(C)=O SRCZQMGIVIYBBJ-UHFFFAOYSA-N 0.000 description 1
- 125000002534 ethynyl group Chemical group [H]C#C* 0.000 description 1
- 230000003203 everyday effect Effects 0.000 description 1
- 230000029142 excretion Effects 0.000 description 1
- 238000011049 filling Methods 0.000 description 1
- 239000012065 filter cake Substances 0.000 description 1
- 239000000796 flavoring agent Substances 0.000 description 1
- 235000013355 food flavoring agent Nutrition 0.000 description 1
- 235000003599 food sweetener Nutrition 0.000 description 1
- 239000012737 fresh medium Substances 0.000 description 1
- 125000000524 functional group Chemical group 0.000 description 1
- 125000002541 furyl group Chemical group 0.000 description 1
- 239000008273 gelatin Substances 0.000 description 1
- 229920000159 gelatin Polymers 0.000 description 1
- 235000019322 gelatine Nutrition 0.000 description 1
- 235000011852 gelatine desserts Nutrition 0.000 description 1
- 239000012362 glacial acetic acid Substances 0.000 description 1
- 125000004051 hexyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 150000002430 hydrocarbons Chemical group 0.000 description 1
- 230000002209 hydrophobic effect Effects 0.000 description 1
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 1
- 125000002632 imidazolidinyl group Chemical group 0.000 description 1
- 238000011534 incubation Methods 0.000 description 1
- 125000001041 indolyl group Chemical group 0.000 description 1
- 239000007924 injection Substances 0.000 description 1
- 238000002347 injection Methods 0.000 description 1
- 239000000543 intermediate Substances 0.000 description 1
- 238000007918 intramuscular administration Methods 0.000 description 1
- 238000007912 intraperitoneal administration Methods 0.000 description 1
- 238000001990 intravenous administration Methods 0.000 description 1
- 239000011630 iodine Substances 0.000 description 1
- 229910052740 iodine Inorganic materials 0.000 description 1
- PELJISAVHGXLAL-UHFFFAOYSA-N iodomethyl 2,2-dimethylpropanoate Chemical compound CC(C)(C)C(=O)OCI PELJISAVHGXLAL-UHFFFAOYSA-N 0.000 description 1
- KWIBRJGXWFDQNU-UHFFFAOYSA-N iodomethyl 2-methylpropanoate Chemical compound CC(C)C(=O)OCI KWIBRJGXWFDQNU-UHFFFAOYSA-N 0.000 description 1
- JZJSMICTNBOBIT-UHFFFAOYSA-N iodomethyl 2-methylpropyl carbonate Chemical compound CC(C)COC(=O)OCI JZJSMICTNBOBIT-UHFFFAOYSA-N 0.000 description 1
- DHEPIQOGGUAJGR-UHFFFAOYSA-N iodomethyl propan-2-yl carbonate Chemical compound CC(C)OC(=O)OCI DHEPIQOGGUAJGR-UHFFFAOYSA-N 0.000 description 1
- 150000002505 iron Chemical class 0.000 description 1
- 230000000622 irritating effect Effects 0.000 description 1
- 230000007794 irritation Effects 0.000 description 1
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 description 1
- WDAXFOBOLVPGLV-UHFFFAOYSA-N isobutyric acid ethyl ester Natural products CCOC(=O)C(C)C WDAXFOBOLVPGLV-UHFFFAOYSA-N 0.000 description 1
- 238000010829 isocratic elution Methods 0.000 description 1
- 125000000904 isoindolyl group Chemical group C=1(NC=C2C=CC=CC12)* 0.000 description 1
- 238000006317 isomerization reaction Methods 0.000 description 1
- 125000001972 isopentyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 125000002183 isoquinolinyl group Chemical group C1(=NC=CC2=CC=CC=C12)* 0.000 description 1
- 125000004628 isothiazolidinyl group Chemical group S1N(CCC1)* 0.000 description 1
- 125000003965 isoxazolidinyl group Chemical group 0.000 description 1
- 238000002372 labelling Methods 0.000 description 1
- 230000000670 limiting effect Effects 0.000 description 1
- 210000004185 liver Anatomy 0.000 description 1
- 239000007937 lozenge Substances 0.000 description 1
- 239000000314 lubricant Substances 0.000 description 1
- 230000004060 metabolic process Effects 0.000 description 1
- 229910052751 metal Inorganic materials 0.000 description 1
- 239000002184 metal Substances 0.000 description 1
- CNMFHDIDIMZHKY-UHFFFAOYSA-N methyl 2,2-dimethylpropanoate Chemical compound COC(=O)C(C)(C)C CNMFHDIDIMZHKY-UHFFFAOYSA-N 0.000 description 1
- PDOXCFPUGNQQSW-UHFFFAOYSA-N methyl 2-methylpropyl carbonate Chemical compound COC(=O)OCC(C)C PDOXCFPUGNQQSW-UHFFFAOYSA-N 0.000 description 1
- 239000004005 microsphere Substances 0.000 description 1
- 238000013508 migration Methods 0.000 description 1
- 230000005012 migration Effects 0.000 description 1
- 150000007522 mineralic acids Chemical class 0.000 description 1
- 125000002950 monocyclic group Chemical group 0.000 description 1
- 125000006578 monocyclic heterocycloalkyl group Chemical group 0.000 description 1
- 125000002757 morpholinyl group Chemical group 0.000 description 1
- WGHJJYHCMKGYSW-RBZQAINGSA-N n-[9-[(2r,4s,5r)-4-[tert-butyl(diphenyl)silyl]oxy-5-(hydroxymethyl)oxolan-2-yl]-6-oxo-3h-purin-2-yl]-2-methylpropanamide Chemical compound O([C@H]1C[C@@H](O[C@@H]1CO)N1C=NC=2C(=O)N=C(NC=21)NC(=O)C(C)C)[Si](C(C)(C)C)(C=1C=CC=CC=1)C1=CC=CC=C1 WGHJJYHCMKGYSW-RBZQAINGSA-N 0.000 description 1
- YMEHYKUYVLZTCY-UPRLRBBYSA-N n-[9-[(2r,4s,5r)-4-[tert-butyl(diphenyl)silyl]oxy-5-(hydroxymethyl)oxolan-2-yl]purin-6-yl]benzamide Chemical compound N1=CN=C2N([C@H]3C[C@@H]([C@H](O3)CO)O[Si](C(C)(C)C)(C=3C=CC=CC=3)C=3C=CC=CC=3)C=NC2=C1NC(=O)C1=CC=CC=C1 YMEHYKUYVLZTCY-UPRLRBBYSA-N 0.000 description 1
- PIXHJAPVPCVZSV-YNEHKIRRSA-N n-[9-[(2r,4s,5r)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]purin-6-yl]benzamide Chemical compound C1[C@H](O)[C@@H](CO)O[C@H]1N1C2=NC=NC(NC(=O)C=3C=CC=CC=3)=C2N=C1 PIXHJAPVPCVZSV-YNEHKIRRSA-N 0.000 description 1
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000000740 n-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- 125000001624 naphthyl group Chemical group 0.000 description 1
- 125000001971 neopentyl group Chemical group [H]C([*])([H])C(C([H])([H])[H])(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 125000002868 norbornyl group Chemical group C12(CCC(CC1)C2)* 0.000 description 1
- 239000002777 nucleoside Substances 0.000 description 1
- 150000003833 nucleoside derivatives Chemical class 0.000 description 1
- 239000003921 oil Substances 0.000 description 1
- 239000002674 ointment Substances 0.000 description 1
- 150000007524 organic acids Chemical class 0.000 description 1
- 150000007530 organic bases Chemical class 0.000 description 1
- 125000000160 oxazolidinyl group Chemical group 0.000 description 1
- 125000002971 oxazolyl group Chemical group 0.000 description 1
- 125000003551 oxepanyl group Chemical group 0.000 description 1
- 125000003566 oxetanyl group Chemical group 0.000 description 1
- 125000000466 oxiranyl group Chemical group 0.000 description 1
- 238000007911 parenteral administration Methods 0.000 description 1
- 239000003208 petroleum Substances 0.000 description 1
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 description 1
- 125000004193 piperazinyl group Chemical group 0.000 description 1
- 125000003386 piperidinyl group Chemical group 0.000 description 1
- 125000003367 polycyclic group Chemical group 0.000 description 1
- 229920000642 polymer Polymers 0.000 description 1
- 239000000843 powder Substances 0.000 description 1
- 239000002243 precursor Substances 0.000 description 1
- 238000004237 preparative chromatography Methods 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 239000008213 purified water Substances 0.000 description 1
- 125000003373 pyrazinyl group Chemical group 0.000 description 1
- 125000003226 pyrazolyl group Chemical group 0.000 description 1
- TUEVQPUBMYVDSI-UHFFFAOYSA-N pyridin-1-ium 2,2,2-trifluoroacetate Chemical compound C1=CC=[NH+]C=C1.C1=CC=[NH+]C=C1.[O-]C(=O)C(F)(F)F.[O-]C(=O)C(F)(F)F TUEVQPUBMYVDSI-UHFFFAOYSA-N 0.000 description 1
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
- 125000004076 pyridyl group Chemical group 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- 125000000719 pyrrolidinyl group Chemical group 0.000 description 1
- 125000000168 pyrrolyl group Chemical group 0.000 description 1
- 125000002943 quinolinyl group Chemical group N1=C(C=CC2=CC=CC=C12)* 0.000 description 1
- 238000005215 recombination Methods 0.000 description 1
- 230000006798 recombination Effects 0.000 description 1
- 230000002829 reductive effect Effects 0.000 description 1
- 239000011347 resin Substances 0.000 description 1
- 229920005989 resin Polymers 0.000 description 1
- 238000001223 reverse osmosis Methods 0.000 description 1
- 238000012216 screening Methods 0.000 description 1
- 125000002914 sec-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 125000003548 sec-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])[H] 0.000 description 1
- 239000002002 slurry Substances 0.000 description 1
- 229910052708 sodium Inorganic materials 0.000 description 1
- 159000000000 sodium salts Chemical class 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 239000008174 sterile solution Substances 0.000 description 1
- 239000011550 stock solution Substances 0.000 description 1
- 239000004575 stone Substances 0.000 description 1
- 238000007920 subcutaneous administration Methods 0.000 description 1
- 239000000829 suppository Substances 0.000 description 1
- 239000003765 sweetening agent Substances 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 1
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 description 1
- 125000001412 tetrahydropyranyl group Chemical group 0.000 description 1
- 125000005958 tetrahydrothienyl group Chemical group 0.000 description 1
- 125000004632 tetrahydrothiopyranyl group Chemical group S1C(CCCC1)* 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- 125000001984 thiazolidinyl group Chemical group 0.000 description 1
- 125000001544 thienyl group Chemical group 0.000 description 1
- 125000001583 thiepanyl group Chemical group 0.000 description 1
- 125000002053 thietanyl group Chemical group 0.000 description 1
- 125000004568 thiomorpholinyl group Chemical group 0.000 description 1
- 230000000699 topical effect Effects 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 125000004306 triazinyl group Chemical group 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 239000001993 wax Substances 0.000 description 1
Classifications
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/70—Carbohydrates; Sugars; Derivatives thereof
- A61K31/7084—Compounds having two nucleosides or nucleotides, e.g. nicotinamide-adenine dinucleotide, flavine-adenine dinucleotide
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P1/00—Drugs for disorders of the alimentary tract or the digestive system
- A61P1/16—Drugs for disorders of the alimentary tract or the digestive system for liver or gallbladder disorders, e.g. hepatoprotective agents, cholagogues, litholytics
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P31/00—Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
- A61P31/12—Antivirals
- A61P31/20—Antivirals for DNA viruses
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
- C07H21/04—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
Abstract
Dinucleotide compounds and prodrugs thereof are disclosed. In particular to a dinucleotide compound shown in a general formula (I), a tautomer, a stereoisomer or a pharmaceutically acceptable salt thereof, a preparation method thereof, a pharmaceutical composition thereof and a medical application thereof in treating hepatitis B virus infection, especially liver diseases caused by the hepatitis B virus infection.
Description
Cross Reference to Related Applications
This application claims priority and benefit to chinese patent application No. 201811487263.4, filed on 2018, 12/06/h, to the chinese intellectual property office, the disclosure of which is hereby incorporated by reference in its entirety.
The present application relates to dinucleotide compounds and prodrugs thereof, methods for preparing the same, pharmaceutical compositions containing the same, and uses thereof in treating Hepatitis B Virus (HBV) infection and HBV-related liver diseases.
Chronic viral hepatitis b is currently incurable and controllable, and two anti-HBV drugs that have been clinically approved include interferon-alpha and nucleoside analogs, but there are usually problems of rapid emergence of drug resistance and toxicity due to dose limitations associated with treatment. Many current drugs also suffer from poor absorption, distribution, metabolism and/or excretion (ADME) properties, which prevent their wider use. Poor ADME properties are also a large reason for the failure of candidate drugs in clinical trials.
The existing oligonucleotide drugs such as SB9000 and precursor drug SB9200 thereof have safety and antiviral effects in chronic hepatitis B patients without liver cirrhosis, but the development of compounds with better anti-HBV activity, safety, prodrug release active compound speed and bioavailability, higher stability and certain liver targeting property is still needed.
Summary of The Invention
The present application relates to compounds of general formula I, tautomers, stereoisomers, or pharmaceutically acceptable salts thereof,
R is selected from C1-12Alkyl radical, C1-12Alkoxy radical, C2-6Alkenyl radical, C2-6Alkynyl, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, said R group being optionally substituted with one or more groups selected from: halogen, -OH, C1-6Alkyl, - (OCH)2CH 2) m-OC 1-6Alkyl, -NO2、-CN、-NH 2、-NH(C 1-6Alkyl), -N (C)1-6Alkyl radical)2、-C(O)C 1-6Alkyl, -C (O) OC1-6Alkyl, -CONHC1-6Alkyl, -SH, -SC1-6Alkyl radical, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, wherein m is selected from 0, 1,2,3,4 or 5;
R 2selected from H, -OH, halogen, C1-6Alkyl radical, C 1-6Alkoxy radical, C3-10Cycloalkyl, 3-10 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl;
R 4Selected from H, C1-6Alkyl radical, C3-6Cycloalkyl or 3-6 membered heterocycloalkyl.
In another aspect, the present application relates to a pharmaceutical composition comprising a compound of general formula I of the present application, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof.
In another aspect, the present application relates to a method of treating or inhibiting HBV infection in a mammal comprising administering to the mammal in need thereof a therapeutically effective amount of a compound of formula I, a tautomer, stereoisomer, or pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above.
In another aspect, the present application relates to the use of a compound of formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above, for the preparation of a medicament for the prevention or treatment of HBV infection in a mammal.
In another aspect, the present application relates to the use of a compound of general formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above, for the prevention or treatment of an HBV infection in a mammal.
In another aspect, the present application relates to a compound of general formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above, for use in the prevention or treatment of HBV infection in a mammal.
Detailed Description
The present application relates to compounds of general formula I, tautomers, stereoisomers, or pharmaceutically acceptable salts thereof,
R is selected from C1-12Alkyl radical, C1-12Alkoxy radical, C2-6Alkenyl radical, C2-6Alkynyl, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, said R group being optionally substituted with one or more groups selected from: halogen, -OH, C1-6Alkyl, - (OCH)2CH 2) m-OC 1-6Alkyl, -NO2、-CN、-NH 2、-NH(C 1-6Alkyl), -N (C)1-6Alkyl radical)2、-C(O)C 1-6Alkyl, -C (O) OC1-6Alkyl, -CONHC1-6Alkyl, -SH, -SC1-6Alkyl radical, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, wherein m is selected from 0, 1,2,3,4 or 5;
R 2selected from H, -OH, halogen, C1-6Alkyl radical, C1-6Alkoxy radical, C3-10Cycloalkyl, 3-10 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl;
R 4Selected from H, C1-6Alkyl radical, C3-6Cycloalkyl or 3-6 membered heterocycloalkyl.
The application relates to a compound of general formula I or a pharmaceutically acceptable salt thereof,
R is selected from C1-12Alkyl radical, C1-12Alkoxy radical, C2-6Alkenyl radical, C2-6Alkynyl, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, said R being optionally substituted with: halogen, -OH, C1-6Alkyl, - (OCH)2CH 2) m-OC 1-6Alkyl, -NO2、-CN、-NH 2、-NH(C 1-6Alkyl), -N (C)1-6Alkyl radical)2、-C(O)C 1-6Alkyl, -C (O) OC1-6Alkyl, -CONHC1-6Alkyl, -SH, -SC1-6Alkyl radical, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, wherein m is selected from 0, 1,2,3,4 or 5;
R 2selected from H, -OH, halogen, C1-6Alkyl radical, C1-6Alkoxy radical, C3-10Cycloalkyl, 3-10 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl;
R 4Selected from H, C1-6Alkyl radical, C3-6Cycloalkyl or 3-6 membered heterocycloalkyl.
In some embodiments of the present invention, the substrate is,andcombine to formWhereinIs a monovalent cation. In some embodiments of the present invention, the substrate is,may be an alkali metal cation or an ammonium cation, e.g. Na+、K +、Li +Or NH4 +. In some embodiments of the present invention, the substrate is,can be Na+Or NH4 +(ii) a In some embodiments of the present invention, the substrate is,may be NH4 +. In some embodiments, the pharmaceutically acceptable salt of the compound of formula I is selected from sodium or ammonium salts. In some embodiments, the pharmaceutically acceptable salt of the compound of formula I is selected from ammonium salts.
In some embodiments, m is selected from 0, 1,2, or 3; in some embodiments, m is selected from 0, 1 or 2; in some embodiments, m is 0.
In some embodiments, R is selected from C1-6Alkyl radical, C1-6Alkoxy radical, C2-6Alkenyl or C2-6Alkynyl, said R being optionally substituted with one or more groups selected from: - (OCH)2CH 2) m-OCH 3、C 3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl; in some embodiments, R is selected from C1-6Alkyl or C1-6Alkoxy, said R being optionally substituted by one or more C3-6Cycloalkyl substitution; in some embodiments, R is selected from (CH)3) 2CHO-、(CH 3CH 2) 2CHO-、(CH 3) 2CHCH 2O-、(CH 3CH 2) 2CHCH 2O-、(CH 3) 3CCH 2O-, cyclopropyl-CH2O-、(CH 3) 2CH-or (CH)3) 3C-。
In some embodiments, R2Selected from H, -OH or halogen; in some embodiments, R2Selected from H or halogen; in some embodiments, R2Selected from H or fluorine. In some embodiments, R2Is selected from H.
In some embodiments, R4Is selected from C1-6An alkyl group; in some embodiments of the present invention, the substrate is,R 4is selected from C1-3An alkyl group; in some embodiments, R4Is methyl.
In some embodiments, the pharmaceutically acceptable salt of the compound of formula I is selected from the sodium salt of the compound of formula I or the ammonium salt of the compound of formula I.
In some embodiments, the compound of general formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, of the present application is selected from the following compounds, tautomers, stereoisomers, or pharmaceutically acceptable salts thereof:
in some embodiments, the compound of general formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, of the present application is selected from:
in another aspect, the present application relates to a pharmaceutical composition comprising a compound of general formula I of the present application, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof. In some embodiments, the pharmaceutical compositions of the present application further comprise a pharmaceutically acceptable excipient.
In another aspect, the present application relates to a method of treating or inhibiting HBV infection in a mammal, comprising administering to a mammal, preferably a human, in need thereof a therapeutically effective amount of a compound of formula I, a tautomer, stereoisomer, or pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above.
In another aspect, the present application relates to the use of a compound of formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition thereof, for the preparation of a medicament for the prevention or treatment of HBV infection in a mammal.
In another aspect, the present application relates to the use of a compound of formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above, for the prevention or treatment of HBV infection in a mammal.
In another aspect, the present application relates to a compound of formula I, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition as described above, for the prevention or treatment of HBV infection in a mammal.
In some embodiments of the present application, the treatment of HBV infection refers to controlling, reducing or eliminating HBV to ameliorate or cure liver disease in an infected mammal or patient.
Definition of
The following terms used in the present application have the following meanings, unless otherwise specified. A particular term should not be considered as ambiguous or unclear without special definition, but rather construed according to ordinary meaning in the art. When a trade name appears herein, it is intended to refer to its corresponding commodity or its active ingredient.
The term "substituted" means that any one or more hydrogen atoms on a particular atom or group is replaced with a substituent, so long as the valency of the particular atom or group is normal and the substituted compound is stable.
The term "optional" or "optionally" means that the subsequently described event or circumstance may or may not occurAnd generating a description that includes both the occurrence of the event or circumstance and the non-occurrence of the event or circumstance. For example, ethyl is "optionally" substituted with halo, meaning that ethyl may be unsubstituted (CH)2CH 3) Monosubstituted (e.g. CH)2CH 2F) Polysubstituted (e.g. CHFCH)2F、CH 2CHF 2Etc.) or completely substituted (CF)2CF 3). It will be appreciated by those skilled in the art that any group containing one or more substituents will not incorporate any substitution or substitution pattern which is sterically impossible and/or cannot be synthesized.
Herein Cm-nMeaning that the moiety has an integer number of carbon atoms in the given range. E.g. "C1-6By "is meant that the group can have 1 carbon atom, 2 carbon atoms, 3 carbon atoms, 4 carbon atoms, 5 carbon atoms, or 6 carbon atoms.
When any variable (e.g., R) occurs more than one time in the composition or structure of a compound, its definition in each case is independent. Thus, for example, if a group is substituted with 2R, then there are separate options for each R.
The term "halo" or "halogen" refers to fluorine, chlorine, bromine and iodine.
The term "alkyl" refers to a group of formula CnH 2n+1A hydrocarbon group of (1). The alkyl group may be linear or branched. For example, the term "C1- 12Alkyl "refers to an alkyl group containing 1 to 12 carbon atoms; the term "C1- 6Alkyl "means an alkyl group having 1 to 6 carbon atoms (e.g., methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, tert-butyl, n-pentyl, 1-methylbutyl, 2-methylbutyl, 3-methylbutyl, neopentyl, hexyl, 2-methylpentyl, and the like). Similarly, the alkyl portion (i.e., alkyl) of alkoxy, alkylamino, dialkylamino, alkanoyl, alkylsulfonyl and alkylthio groups have the same definitions as above.
The term "alkoxy" refers to-O-alkyl.
The term "alkenyl" refers to a straight or branched chain unsaturated aliphatic hydrocarbon group having at least one double bond, consisting of carbon atoms and hydrogen atoms. Non-limiting examples of alkenyl groups include, but are not limited to, vinyl, allyl, 1-propenyl, 2-propenyl, 1-butenyl, isobutenyl, 1, 3-butadienyl, and the like.
The term "alkynyl" refers to a straight or branched chain unsaturated aliphatic hydrocarbon group having at least one triple bond consisting of carbon atoms and hydrogen atoms. Non-limiting examples of alkynyl groups include, but are not limited to, ethynyl (-C ≡ CH), 1-propynyl (-C ≡ C-CH)3) 2-propynyl (-CH)2-C.ident.CH), 1, 3-butadiynyl (-C.ident.C-C.ident.CH), and the like.
The term "cycloalkyl" refers to a carbon ring that is fully saturated and may exist in the form of a single ring, fused ring, bridged ring, or spiro ring. Unless otherwise indicated, the carbocycle is typically a 3 to 10 membered ring or a 3-6 membered ring. Non-limiting examples of cycloalkyl groups include, but are not limited to, cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, norbornyl (bicyclo [2.2.1] heptyl), bicyclo [2.2.2] octyl, adamantyl, and the like.
The term "heterocycloalkyl" refers to a cyclic group that is fully saturated and may exist as a single ring, fused ring, bridged ring, or spiro ring, which may have 1 to 4 heteroatoms selected from nitrogen, oxygen, and/or sulfur. Unless otherwise indicated, the heterocycloalkyl group is typically a 3 to 6 membered, 3 to 7 membered or 3 to 10 membered ring containing 1 to 3 heteroatoms (preferably 1 or 2 heteroatoms) independently selected from sulfur, oxygen and/or nitrogen. Examples of 3-membered heterocycloalkyl include, but are not limited to, oxiranyl, thietanyl, cycloazenyl, non-limiting examples of 4-membered heterocycloalkyl include, but are not limited to, azetidinyl, oxetanyl, thiabutinyl, examples of 5-membered heterocycloalkyl include, but are not limited to, tetrahydrofuranyl, tetrahydrothienyl, pyrrolidinyl, isoxazolidinyl, oxazolidinyl, isothiazolidinyl, thiazolidinyl, imidazolidinyl, examples of tetrahydropyrazolyl, 6-membered heterocycloalkyl include, but are not limited to, piperidinyl, tetrahydropyranyl, tetrahydrothiopyranyl, morpholinyl, piperazinyl, 1, 4-thialkyl, 1, 4-dioxanyl, thiomorpholinyl, 1, 3-dithianyl, 1, 4-dithianyl, and examples of 7-membered heterocycloalkyl include, but are not limited to, azepanyl, oxepanyl, thiepanyl. Monocyclic heterocycloalkyl groups having 5 or 6 ring atoms are preferred.
The term "aryl" refers to an all-carbon monocyclic or fused polycyclic aromatic ring group having a conjugated pi-electron system. For example, the aryl group can have 6 to 20 carbon atoms, 6 to 14 carbon atoms, 6 to 12 carbon atoms, or 6 to 10 carbon atoms. Non-limiting examples of aryl groups include, but are not limited to, phenyl, naphthyl, anthracenyl, and 1,2,3, 4-tetrahydronaphthalene, and the like.
The term "heteroaryl" refers to a monocyclic or fused polycyclic ring system containing as ring atoms at least one (e.g., 1,2,3,4, 5, or 1 to 3) heteroatom selected from N, O and S, the remaining ring atoms being C, and having at least one aromatic ring. The heteroaryl group can be a 5 to 10 membered aromatic ring containing 1 to 3 or 1 to 4 heteroatoms independently selected from N, O and S. Preferred heteroaryl groups have a single 5 to 8 membered ring, or multiple fused rings containing 6 to 14, especially 6 to 10 ring atoms. Non-limiting examples of heteroaryl groups include, but are not limited to, pyrrolyl, furanyl, thienyl, imidazolyl, oxazolyl, pyrazolyl, pyridyl, pyrimidinyl, pyrazinyl, quinolinyl, isoquinolinyl, tetrazolyl, triazolyl, triazinyl, benzofuranyl, benzothienyl, indolyl, isoindolyl, and the like.
The term "preventing" means preventing the occurrence of a disease, disorder, or condition in a mammal, particularly when such mammal is susceptible to the disease, disorder, or condition, but has not yet been diagnosed as having the disease, disorder, or condition, or when such mammal is susceptible to being at risk of having the disease, disorder, or condition.
The term "treating" means administering a compound or formulation described herein to ameliorate or eliminate a disease or one or more symptoms associated with the disease, and includes:
(i) inhibiting the disease or disease state, i.e., arresting its development;
(ii) alleviating the disease or condition, i.e., causing regression of the disease or condition.
The term "therapeutically effective amount" means an amount of a compound of the present application that (i) treats or prevents a particular disease, disease state, or condition, (ii) alleviates, ameliorates, or eliminates one or more symptoms of a particular disease, disease state, or condition, or (iii) prevents or delays the onset of one or more symptoms of a particular disease, disease state, or condition described herein. The amount of a compound of the present application that constitutes a "therapeutically effective amount" varies depending on the compound, the disease, disease state or condition and its severity, the mode of administration, and the age of the mammal to be treated, but can be routinely determined by those skilled in the art with their own knowledge and this disclosure.
The term "pharmaceutically acceptable" is intended to refer to those compounds, materials, compositions, and/or dosage forms which are, within the scope of sound medical judgment, suitable for use in contact with the tissues of human beings and animals without excessive toxicity, irritation, allergic response, or other problem or complication, commensurate with a reasonable benefit/risk ratio.
As the pharmaceutically acceptable salt, for example, a metal salt (for example, an alkali metal salt, an alkaline earth metal salt, an aluminum salt, an iron salt, or the like), an ammonium salt, a salt with an organic base (for example, organic amine), a salt with an inorganic acid, a salt with an organic acid, a salt with a basic or acidic amino acid, or the like can be mentioned.
The term "pharmaceutical composition" refers to a mixture comprising one or more compounds of the present application, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient. The purpose of the pharmaceutical composition is to facilitate administration of the compounds of the present application to an organism.
The term "pharmaceutically acceptable adjuvants" refers to those adjuvants which do not have a significant irritating effect on the organism and do not impair the biological activity and properties of the active compound. Suitable adjuvants are well known to those skilled in the art, such as carbohydrates, waxes, water-soluble and/or water-swellable polymers, hydrophilic or hydrophobic materials, gelatin, oils, solvents, water, and the like.
The words "comprise" or "comprise" and variations thereof such as "comprises" or "comprising," are to be understood in an open, non-exclusive sense, i.e., "including but not limited to.
The compounds and intermediates of the present application may also exist in different tautomeric forms, and all such forms are included within the scope of the present application. The term "tautomer" or "tautomeric form" refers to structural isomers of different energies that can interconvert via a low energy barrier. For example, proton tautomers (also referred to as proton transfer tautomers) include interconversion via proton migration, such as keto-enol and imine-enamine isomerizations. A specific example of a proton tautomer is an imidazole moiety, wherein the proton can migrate between two ring nitrogens. Valence tautomers include interconversion by recombination of some of the bonding electrons.
The compounds of the present application may be asymmetric, e.g., having one or more stereoisomers. Unless otherwise indicated, all stereoisomers, such as enantiomers and diastereomers, are included within the scope of the present application. The compounds of the present application containing asymmetric carbon atoms can be isolated in optically active pure form or in racemic form. The optically active pure form can be resolved from a racemic mixture or synthesized by using chiral starting materials or chiral reagents.
The compounds of the present application may exist in specific geometric isomeric or stereoisomeric forms. The present application contemplates all such compounds, including tautomers, cis and trans isomers, (-) -and (+) -enantiomers, (R) -and (S) -enantiomers, diastereomers, (D) -isomers, (L) -isomers, as well as racemic and other mixtures thereof, such as enantiomerically or diastereomerically enriched mixtures, all of which are within the scope of the present application. Additional asymmetric carbon atoms may be present in substituents such as alkyl groups. All such isomers and mixtures thereof are included within the scope of the present application.
The pharmaceutical compositions of the present application can be prepared by combining the compounds of the present application with suitable pharmaceutically acceptable excipients, for example, can be formulated into solid, semi-solid, liquid or gaseous formulations, such as tablets, pills, capsules, powders, granules, ointments, emulsions, suspensions, suppositories, injections, inhalants, gels, microspheres, aerosols, and the like.
Typical routes of administration of a compound of the present application or a pharmaceutically acceptable salt thereof or a pharmaceutical composition thereof include, but are not limited to, oral, rectal, topical, inhalation, parenteral, sublingual, intravaginal, intranasal, intraocular, intraperitoneal, intramuscular, subcutaneous, intravenous administration.
The pharmaceutical compositions of the present application can be manufactured by methods well known in the art, such as conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, lyophilizing, and the like.
In some embodiments, the pharmaceutical composition is in a dosage form for oral administration. For oral administration, the pharmaceutical compositions may be formulated by mixing the active compounds with pharmaceutically acceptable excipients well known in the art. These adjuvants enable the compounds of the present application to be formulated as tablets, pills, lozenges, dragees, capsules, liquids, gels, slurries, suspensions and the like, for oral administration to a patient.
Solid oral compositions may be prepared by conventional mixing, filling or tableting methods. For example, it can be obtained by the following method: the active compounds are mixed with solid adjuvants, optionally the mixture obtained is milled, if desired with further suitable adjuvants, and the mixture is then processed to granules, to give tablets or dragee cores. Suitable excipients include, but are not limited to: binders, diluents, disintegrants, lubricants, glidants, sweeteners or flavoring agents, and the like.
The pharmaceutical compositions may also be adapted for parenteral administration, as sterile solutions, suspensions or lyophilized products in suitable unit dosage forms.
In all methods of administration of the compounds of general formula I described herein, the daily dose is from 0.01mg/kg body weight to 200mg/kg body weight, either as a single dose or in divided doses.
The compounds of the present application may be prepared by a variety of synthetic methods well known to those skilled in the art, including the specific embodiments listed below, embodiments formed by combinations thereof with other chemical synthetic methods, and equivalents thereof known to those skilled in the art, with preferred embodiments including, but not limited to, the examples of the present application.
The chemical reactions of the embodiments herein are carried out in a suitable solvent that is compatible with the chemical changes of the present application and the reagents and materials required therefor. In order to obtain the compounds of the present application, it is sometimes necessary for a person skilled in the art to modify or select the synthesis steps or reaction schemes based on the existing embodiments.
An important consideration in the art of synthetic route planning is the selection of suitable protecting Groups for reactive functional Groups (such as hydroxyl Groups in the present application), for example, reference may be made to Greene's Protective Groups in Organic Synthesis (4th Ed.) Hoboken, New Jersey: John Wiley & Sons, Inc. all references cited herein are incorporated herein in their entirety.
In some embodiments, the compounds of formula I herein may be prepared by one skilled in the art of organic synthesis by the following route:
route 1:
route 2:
wherein R is1、R、R 2、R 4The definition is the same as that of the compound in the general formula I.
The following abbreviations are used in this application:
me represents a methyl group; TBDPS represents tert-butyldiphenylsilyl; DMSO represents dimethyl sulfoxide.
For clarity, the invention is further illustrated by examples, which do not limit the scope of the application. All reagents used herein were commercially available and used without further purification.
Example 1: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R)) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (R) -ammonium thiophosphate
Step 1: (2R,3R,3aS,9aR) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -3-hydroxy-2, 3,3a,9 a-tetrahydro-6H-furo [2',3':4,5] oxazolo [3,2-a ] pyrimidin-6-one
To a reaction flask were added (2R,3R,3aS,9aR) -3-hydroxy-2-hydroxymethyl-2, 3,3a,9 a-tetrahydro-6H-furo [2',3':4,5] oxazolo [3,2-a ] pyrimidin-6-one (30g), 4,4' - (chloro (phenyl) methylene) bis (methoxybenzene) (49.4g), N, N-dimethylpyridin-4-amine (0.12g), N, N-dimethylformamide (120ml) and pyridine (360ml) in this order, and the mixture was stirred at room temperature for 22 hours. The reaction was concentrated, the residue was taken up in dichloromethane and washed with 5% sodium bicarbonate solution. The organic phase was dried over anhydrous sodium sulfate, filtered, concentrated to give a crude product, and purified by slurrying with methyl tert-butyl ether to give the title compound (45.74 g).
1H NMR(500MHz,DMSO-d 6):δ7.94(d,J=7.5Hz,1H),7.31-7.26(m,4H),7.21-7.14(m,5H),6.86-6.83(m,4H),6.34(d,J=6.0Hz,1H),5.95(d,J=4.5Hz,1H),5.89(d,J=7.0Hz,1H),5.22(d,J=5.5Hz,1H),4.34-4.31(m,1H),4.25-4.20(m,1H),3.74(s,6H),2.98-2.95(m,1H),2.86-2.82(m,1H).
Step 2: 1- ((2R,3R,4R,5R) -5- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -4-hydroxy-3- (2-methoxyethoxy) tetrahydrofuran-2-yl) pyrimidine-2, 4(1H,3H) -dione
A magnesium rod (7.28g) and 2-methoxyethyl-1-ol (236ml) were successively charged into a reaction flask, and reacted at 110 ℃ for 10 minutes. The reaction was cooled to room temperature and (2R,3aS, 9aR) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -3-hydroxy-2, 3,3a,9 a-tetrahydro-6H-furo [2',3':4,5] oxazolo [3,2-a ] pyrimidin-6-one (35g) was added, heated to 80 ℃ and reacted for 9H. 600ml of water and 600ml of dichloromethane were added to the reaction solution under ice bath, the pH of the reaction solution was adjusted to about 7 with glacial acetic acid, and the organic phase was washed with water and saturated brine, respectively, dried over anhydrous sodium sulfate, filtered, concentrated to give a crude product, and purified by column chromatography (dichloromethane: methanol ═ 50:1) to give the title compound (32 g).
1H NMR(500MHz,DMSO-d 6):δ11.37(s,1H),7.73(d,J=8.0Hz,1H),7.39(d,J=8.0Hz,2H),7.33(t,J=7.5Hz,2H),7.26-7.27(m,5H),6.91(d,J=8.5Hz,4H),5.81-5.82(m,1H),5.31(d,J=8.0Hz,1H),5.10(d,J=6.5Hz,1H),4.20(q,J=6.0Hz,1H),3.97-4.02(m,2H),3.75(s,6H),3.73-3.74(m,2H),3.49(t,J=5.0Hz,2H),3.29-3.32(m,1H),3.25(s,4H).
And step 3: (2R,3R,4R,5R) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
1- ((2R,3R,4R,5R) -5- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -4-hydroxy-3- (2-methoxyethoxy) tetrahydrofuran-2-yl) pyrimidine-2, 4(1H,3H) -dione (32g) was dissolved in dichloromethane (150ml), and a solution of 3- ((di (diisopropylamino) phosphono) oxy) propionitrile (20.15g) and pyridin-1-ium 2,2, 2-trifluoroacetate (12.26g) in dichloromethane (50ml) was slowly added dropwise and the reaction solution was stirred at room temperature for 2H. Concentrating the reaction solution to obtain crude product, and performing column chromatography (using stone as column)Oily ether ethyl acetate 1:1) to give the title compound (15.11 g). MS (ESI) M/z 827.5[ M + Na ]] +。
And 4, step 4: ((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl ((2R,3R,4R,5R) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (2-cyanoethyl) phosphite
(2R,3R,4R,5R) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite (13g) was dissolved in anhydrous acetonitrile (240ml), and a solution of N- (9- ((2R,4S,5R) -4-hydroxy-5- (hydroxymethyl) tetrahydrofuran-2-yl) -9H-purin-6-yl) benzamide (8.73g) in N, N-dimethylformamide (60ml) and a solution of 1H-tetrazole (2.615g) in acetonitrile (83ml) were successively added dropwise, the reaction was stirred at room temperature for 3 h. The reaction solution was concentrated to give a crude product, which was purified by column chromatography (dichlorosilane: methanol: 20:1) to give the title compound (3.86 g). MS (ESI) M/z 1081.3[ M + Na ]] +。
And 5: o- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O- (2-cyanoethyl) thiophosphate
((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl ((2R,3R,4R,5R) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (2-cyanoethyl) phosphite (3.58g) was dissolved in acetonitrile (40ml), a solution of 3H-benzo [ c ] [1,2] dithiol-3-one 1, 1-dioxide (0.691g) in acetonitrile (10ml) was added dropwise, the reaction solution was stirred at room temperature for 2 hours. The reaction solution was concentrated to give a crude product, which was purified by column chromatography (dichlorosilane: methanol: 20:1) to give the title compound (1.37 g).
1H NMR(500MHz,DMSO-d 6):δ11.42(s,1H),11.16(s,1H),8.73(d,J=9.0Hz,1H),8.60(d,J=8.5Hz,1H),8.05(d,J=7.0Hz,2H),7.69-7.65(m,2H),7.57-7.54(m,2H),7.39-7.22(m,9H),6.89(t,J=7.5Hz,4H),6.51(d,J=5.5Hz,1H),5.84(s,1H),5.38(t,J=9.5Hz,1H),5.10(s,1H),4.54-4.07(m,9H),3.74(s,3H),3.72(s,3H),3.64(s,1H),3.44-3.12(m,8H),2.92-2.84(m,3H),2.42(s,1H).
Step 6: o- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) phosphorothioate
O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- ((bis (4-methoxyphenyl) (phenyl) methoxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O- (2-cyanoethyl) thiophosphate (1.37g) was dissolved in methylene chloride (13ml), 2-dichloroacetic acid (0.248g) was added dropwise, and the reaction solution was stirred at room temperature for 1 hour. The reaction solution was adjusted to pH 7 with triethylamine, concentrated to give a crude product, which was purified by column chromatography (dichlorosilane: methanol 10:1) to give the title compound (0.51 g).
1H NMR(500MHz,DMSO-d 6):δ11.40(s,1H),11.16(s,1H),8.76(s,1H),8.63(s,1H),8.05(d,J=8.0Hz,2H),7.87(d,J=8.0Hz,1H),7.65(t,J=7.5Hz,1H),7.56(t,J=7.5Hz,2H),6.53(t,J=6.5Hz,1H),5.91(d,J=6.0Hz,1H),5.72(d,J=8.0Hz,1H),5.59(d,J=4.5Hz,1H),5.33(t,J=5.0Hz,1H),5.04-5.01(m,1H),4.57-4.54(m,1H),4.38-4.11(m,7H),3.72-3.58(m,4H),3.43-3.39(m,2H),3.18(s,3H),2.96-2.91(m,3H),2.47-2.42(m,1H).
And 7: o- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (R) -phosphorothioate
O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) thiophosphate (410mg) was resolved by means of a YMC high-pressure preparative chromatograph (column: YMC Triart C18 high-pressure dynamic axial compression column, 10 μm, 50X 235 mm; mobile phase: water and acetonitrile (25% acetonitrile isocratic elution for 50 minutes); detector: UV 260nm), the eluent was concentrated to give the title compound (146 mg).
1H NMR(500MHz,DMSO-d 6):δ11.39(s,1H),11.17(s,1H),8.76(s,1H),8.63(s,1H),8.05(d,J=8.0Hz,2H),7.87(d,J=8.0Hz,1H),7.65(t,J=7.5Hz,1H),7.56(t,J=7.5Hz,2H),6.54(t,J=6.5Hz,1H),5.92(d,J=6.0Hz,1H),5.71(d,J=8.0Hz,1H),5.57(d,J=4.0Hz,1H),5.32(t,J=5.0Hz,1H),5.03-4.99(m,1H),4.57-4.55(m,1H),4.42-4.13(m,7H),3.67-3.53(m,4H),3.33-3.32(m,2H),3.11(s,3H),2.96-2.91(m,3H),2.46-2.42(m,1H).
And 8: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R)) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (R) -ammonium thiophosphate
O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (R) -phosphorothioate (13mg) was dissolved in aqueous ammonia (1ml), and the reaction mixture was stirred at room temperature for 17H. The reaction solution was adjusted to pH 8 with 50% aqueous acetic acid in ice bath, and extracted with ethyl acetate. The aqueous phase was separated and purified by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to give the title compound (70 mg).
1H NMR(500MHz,DMSO-d 6):δ11.34(s,1H),8.49(s,1H),8.15(s,1H),7.90(d,J=8.5Hz,1H),7.23(s,2H),7.16(brs,4H),6.39-6.36(m,1H),5.86(d,J=6.0Hz,1H),5.68(d,J=8.0Hz,1H),5.37(s,1H),5.19(s,1H),4.76-4.72(m,1H),4.48(s,1H),4.18-4.16(m,1H),4.04-3.88(m,4H),3.77-3.73(m,1H),3.65-3.59(m,2H),3.54-3.50(m,1H),3.38-3.34(m,2H),3.14(s,3H),2.77-2.72(m,1H),2.30-2.25(m,1H).HRMS(ESI)m/z:632.1540[M+H] +.
Example 2: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R)) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -ammonium thiophosphate
Step 1: o- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -phosphorothioate
Reference was made to the operation of step 7 in example 1 to give the title compound (158 mg).
1H NMR(500MHz,DMSO-d 6):δ11.40(s,1H),11.16(s,1H),8.76(s,1H),8.63(s,1H),8.05(d,J=8.0Hz,2H),7.87(d,J=8.0Hz,1H),7.65(t,J=7.5Hz,1H),7.56(t,J=7.5Hz,2H),6.53(t,J=6.5Hz,1H),5.91(d,J=6.0Hz,1H),5.72(d,J=8.0Hz,1H),5.59(d,J=4.5Hz,1H),5.33(t,J=5.0Hz,1H),5.04-5.01(m,1H),4.57-4.54(m,1H),4.38-4.11(m,7H),3.72-3.58(m,4H),3.43-3.39(m,2H),3.18(s,3H),2.96-2.91(m,3H),2.47-2.42(m,1H).
Step 2: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R)) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -ammonium thiophosphate
Starting from O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -thiophosphate, the title compound was obtained by following the procedure of step 8 in example 1.
1H NMR(500MHz,DMSO-d 6):δ11.34(s,1H),8.46(s,1H),8.15(s,1H),7.90(d,J=8.0Hz,1H),7.24(s,2H),7.13(brs,4H),6.39-6.36(m,1H),5.85(d,J=6.0Hz,1H),5.67(d,J=6.0Hz,1H),5.36(s,1H),5.22(s,1H),4.76-4.72(m,1H),4.47(s,1H),4.15-4.14(m,1H),4.04-3.87(m,4H),3.84-3.80(m,1H),3.64-3.61(m,2H),3.58-3.54(m,1H),3.40(t,J=5.0Hz,2H),3.18(s,3H),2.75-2.70(m,1H),2.29-2.25(m,1H).HRMS(ESI)m/z:632.1539[M+H] +.
Example 3: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -sodium thiophosphate
Step 1: (2S,3aS,6R,7aS) -3 a-methyl-2- ((perfluorophenyl) thio) -6- (prop-1-en-2-yl) hexahydrobenzo [ d ] [1,3,2] oxathiolane 2-sulfide
Triethylamine bis (perfluorophenyl) dithiophosphate (126g), (1R,4R,6S) -1-methyl-4- (prop-1-en-2-yl) -7-oxabicyclo [4.1.0] heptane (48.3g) and dibutyl hydrogen phosphate (48.9g) were successively added to a reaction flask, followed by slowly dropping 2, 2-dichloroacetic acid (60.0g) into the above solution and reacting at room temperature for 1 h. After the reaction mixture was concentrated to 500ml, 1000ml of n-hexane was added to the reaction mixture to dilute the mixture, and then the mixture was washed with a 10% potassium dihydrogen phosphate solution and a saturated saline solution. The organic phase was concentrated to 200ml, 200ml of methanol was added, and after further concentration to 50ml, 200ml of methanol was added, and further concentration to 50ml was carried out, and a solid was precipitated. The temperature is reduced to 0 ℃ in an ice bath and then filtered to obtain 93.48g of crude product. The crude product (93.48g) was dissolved in 225ml of dichloromethane, followed by addition of 374ml of n-heptane, and the crude product was completely dissolved. The solution was concentrated to 200ml and 374ml of n-heptane was added, and this operation was repeated 3 times. The solution was concentrated to 200ml and a large amount of solid precipitated which was stirred at room temperature for 2 h. Filtration and drying of the filter cake gave the title compound (62.58 g).
1H NMR(500MHz,CDCl 3):δ5.04(s,1H),4.87(s,1H),4.31-4.27(m,1H),2.64-2.62(m,1H),2.37-2.35(m,1H),2.11-1.85(m,5H),1.83(s,3H),1.68(s,3H).
Step 2: 1- ((2R,3R,4R,5R) -5- (((tert-butyldiphenylsilyl) oxy) methyl) -3- (2-methoxyethoxy) -4- (((2R,3aS,6R,7aS) -3 a-methyl-6- (prop-1-en-2-yl) -2-sulfonylhexahydrobenzo [ d ] [1,3,2] oxathiolan-2-yl) oxy) tetrahydrofuran-2-yl) pyrimidine-2, 4- (1H,3H) -dione
1- ((2R,3R,4R,5R) -5- (((tert-butyldiphenylsilyl) oxy) methyl) -4-hydroxy-3- (2-methoxyethoxy) tetrahydrofuran-2-yl) pyrimidine-2, 4(1H,3H) -dione (35g) and (2S,3aS,6R,7aS) -3 a-methyl-2- ((perfluorophenyl) thio) -6- (prop-1-en-2-yl) hexahydrobenzo [ d ] [1,3,2] oxathiolane 2-sulfide (37.6g) were dissolved in acetonitrile (645ml) and cooled in an ice bath. 2,3,4,6,7,8,9, 10-octahydropyrimido [1,2-a ] azepine (12.81g) was slowly added dropwise to the reaction solution. The reaction was continued for 2h under ice-bath conditions. The reaction solution was washed with purified water and 10% potassium dihydrogen phosphate solution in this order. The organic phase was dried over anhydrous sodium sulfate, filtered, concentrated to give a crude product, which was purified by column chromatography (petroleum ether: ethyl acetate 1:1) to give the title compound (49.23 g).
1H NMR(500MHz,CDCl 3):δ8.92(s,1H),7.80(d,J=8.2Hz,1H),7.70-7.63(m,4H),7.48-7.38(m,6H),6.12(d,J=5.5Hz,1H),5.45-5.41(m,1H),5.38(dd,J=8.3,1.9Hz,1H),5.05(s,1H),4.92(s,1H),4.55-4.59(m,1H),4.32-4.22(m,2H),3.98(dd,J=11.9,2.0Hz,1H),3.90-3.79(m,3H),3.54(t,J=4.5Hz,2H),3.30(s,3H),2.59(s,1H),2.33-2.24(m,1H),2.14(td,J=13.4,4.2Hz,1H),2.00-1.88(m,3H),1.79(s,3H),1.71(d,J=4.9Hz,3H),1.11(s,9H),0.91-0.82(m,1H).
And step 3: o- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3- ((tert-butyldiphenylsilyl) oxy) tetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- (((tert-butyldiphenylsilyl) oxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O-hydro (S) -phosphorothioate
1- ((2R,3R,4R,5R) -5- (((tert-butyldiphenylsilyl) oxy) methyl) -3- (2-methoxyethoxy) -4- (((2R,3aS,6R,7aS) -3 a-methyl-6- (prop-1-en-2-yl) -2-sulfonylhexahydrobenzo [ d ] [1,3,2] oxathiolan-2-yl) oxy) tetrahydrofuran-2-yl) pyrimidine-2, 4- (1H,3H) -dione (25g), N- (9- ((2R,4S,5R) -4- ((tert-butyldiphenylsilyl) oxy) -5- (hydroxymethyl) tetrahydrofuran-2-yl) -9H-purine-6 -yl) benzamide (37.7g) was dissolved in acetonitrile (235ml), and 2,3,4,6,7,8,9, 10-octahydropyrimido [1,2-a ] azepine (14.51g) was added at room temperature, and the reaction solution was stirred for 1 h. The reaction solution was diluted with ethyl acetate, washed successively with a saturated aqueous sodium bicarbonate solution and a saturated brine, and the organic phase was dried over anhydrous sodium sulfate, filtered and concentrated to give a crude product, which was purified by column chromatography (dichloromethane: methanol ═ 10:1) to give the title compound (33.01 g).
1H NMR(500MHz,DMSO-d 6):δ11.43(s,1H),11.17(s,1H),8.93(s,1H),8.73(s,1H),8.05(d,J=7.5Hz,2H),7.67-7.53(m,13H),7.47-7.35(m,13H),6.64-6.61(m,1H),5.89(d,J=6.0Hz,1H),5.24(d,J=8.0Hz,1H),5.01-4.97(m,1H),4.72-4.57(m,1H),4.15(d,J=4.0Hz,1H),4.08-4.02(m,2H),3.92-3.61(m,6H),3.55-3.51(m,1H),3.13(s,3H),2.68-2.64(m,1H),2.30-2.26(m,1H),1.06(s,9H),0.99(s,9H).
And 4, step 4: o- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate
To a reaction flask were added O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3- ((tert-butyldiphenylsilyl) oxy) tetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- (((tert-butyldiphenylsilyl) oxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O-hydro (S) -thiophosphate (25g), tetrabutylammonium fluoride trihydrate (19.52g) and tetrahydrofuran (17ml) in this order, the reaction solution was stirred at room temperature for 17 hours. The reaction solution was diluted with water and washed with diethyl ether. The aqueous phase was concentrated to give 36g of the title compound, which was taken directly to the next step without treatment.
And 5: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate
O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (36g) and aqueous ammonia (260ml) were added successively to the reaction flask, and the mixture was stirred at room temperature for 16 hours. 50% acetic acid aqueous solution was added dropwise to the reaction solution in ice bath to adjust the pH to about 8. The reaction solution was extracted twice with ethyl acetate, the aqueous phase was separated and purified by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1), and the title compound was obtained after concentration (20.27 g). MS (ESI) M/z 630.5[ M-H ]] -.
Step 6: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -sodium thiophosphate
To a reaction flask were added O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (0.30g), a sodium ion exchange resin (6.0g), and deionized water (5ml) in this order, and stirred at room temperature for 1H. Filtration and purification of the aqueous phase by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) gave the title compound (0.16g) after concentration.
1H NMR(500MHz,DMSO-d 6):δ11.36(br,1H),8.46(s,1H),8.15(s,1H),7.82(d,J=8.0Hz,1H),7.25(s,2H),6.37(t,J=7.0Hz,1H),5.85(d,J=5.5Hz,1H),5.60(d,J=8.0Hz,1H),5.40(s,1H),5.26(s,1H),4.81-4.61(m,1H),4.47(d,J=6.0Hz,1H),4.13(t,J=3.0Hz,1H),4.01-3.82(m,5H),3.61(s,2H),3.59-3.54(m,1H),3.39(t,J=5.0Hz,2H),3.18(s,3H),2.74-2.71(m,1H),2.29-2.26(m,1H).MS(ESI)m/z:630.5[M-H] -.
Example 4: o- (((2R,3R,4R,5R) -5- (6-amino-9H-purin-9-yl) -4-fluoro-3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -sodium thiophosphate
Step 1: o- (((2R,3R,4R,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3- ((tert-butyldiphenylsilyl) oxy) -4-fluorotetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- (((tert-butyldiphenylsilyl) oxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O-hydro (S) -thiophosphate
1- ((2R,3R,4R,5R) -5- (((tert-butyldiphenylsilyl) oxy) methyl) -3- (2-methoxyethoxy) -4- (((2R,3aS,6R,7aS) -3 a-methyl-6- (prop-1-en-2-yl) -2-sulfonylhexahydrobenzo [ d ] [1,3,2] oxathiolan-2-yl) oxy) tetrahydrofuran-2-yl) pyrimidine-2, 4- (1H,3H) -dione (1.50g) and N- (9- ((2R,3R,4R,5R) -4- ((tert-butyldiphenylsilyl) oxy) -3-fluoro-5- (hydroxymethyl) tetrahydrofuran-2-yl) -9H) -9 -purin-6-yl) benzamide (2.33g) was dissolved in acetonitrile (30ml), and 2,3,4,6,7,8,9, 10-octahydropyrimido [1,2-a ] azepine (0.87g) was added at room temperature, stirred and reacted for 1 h. The reaction solution was diluted with ethyl acetate, washed with a saturated aqueous sodium bicarbonate solution and a saturated brine in this order, and the organic phase was dried over anhydrous sodium sulfate, filtered, and concentrated to give a crude product, which was purified by column chromatography (dichloromethane: methanol ═ 10:1) to give the title compound (2.00 g).
1H NMR(500MHz,DMSO-d 6):δ11.42(d,J=2.0Hz,1H),11.21(s,1H),8.90(s,1H),8.69(s,1H),8.05(d,J=7.5Hz,2H),7.69-7.47(m,13H),7.47-7.34(m,12H),6.47(dd,J=14.5,5.0Hz,1H),5.88(d,J=6.0Hz,1H),5.40(m,1H),5.22(d,J=8.0Hz,1H),4.97(dt,J=10.0,4.0Hz,1H),4.74(dt,J=8.0,4.0Hz,1H),4.20(s,1H),4.11-4.02(m,2H),3.96(t,J=9.5Hz,1H),3.86-3.77(m, 3H),3.69-3.67(m,1H),3.55-3.53(m,1H),3.37(t,J=5.0Hz,2H),3.14(s,3H),1.09(s,9H),1.00(s,9H).
Step 2: o- (((2R,3R,4R,5R) -5- (6-benzoylamino-9H-purin-9-yl) -4-fluoro-3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate
To a reaction flask were added O- (((2R,3R,4R,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3- ((tert-butyldiphenylsilyl) oxy) -4-fluorotetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- (((tert-butyldiphenylsilyl) oxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O-hydro (S) -thiophosphate (1.80g), tetrabutylammonium fluoride trihydrate (1.15g) and tetrahydrofuran (15ml) in this order, the reaction was stirred at room temperature overnight. The reaction solution was diluted with water and washed with diethyl ether. The aqueous phase was concentrated to give 2.10g of the title compound, which was directly taken to the next step without purification.
And step 3: o- (((2R,3R,4R,5R) -5- (6-amino-9H-purin-9-yl) -4-fluoro-3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate
To a reaction flask were added O- (((2R,3R,4R,5R) -5- (6-benzoylamino-9H-purin-9-yl) -4-fluoro-3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (2.10g) and aqueous ammonia (15ml) in this order, and the mixture was stirred at room temperature and reacted overnight. The reaction was adjusted to pH 8 with 50% aqueous acetic acid in ice bath. The reaction mixture was washed with ethyl acetate, the aqueous phase was separated and purified by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) and concentrated to obtain the title compound (0.90 g). MS (ESI) M/z 648.7[ M-H ]] -.
And 4, step 4: o- (((2R,3R,4R,5R) -5- (6-amino-9H-purin-9-yl) -4-fluoro-3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -sodium thiophosphate
O- (((2R,3R,4R,5R) -5- (6-amino-9H-purin-9-yl) -4-fluoro-3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (0.30g), sodium ion resin (6.0g) and deionized water (5ml) were added successively to the reaction flask and stirred at room temperature for 1H. Filtration and purification of the aqueous phase by reverse phase chromatography on a Biotage C18120 g column (water: acetonitrile 3:1) gave the title compound (0.15g) after concentration.
1H NMR(500MHz,DMSO-d 6):δ11.33(s,1H),8.48(s,1H),8.16(s,1H),7.89(d,J=8.0Hz,1H),7.33(s,2H),6.24(dd,J=16.5,3.0Hz,1H),5.85(d,J=5.5Hz,2H),5.65(d,J=8.0Hz,1H),5.50-5.40(m,1H),5.24(d,J=5.5Hz,1H),4.74(dd,J=10.0,5.0Hz,1H),4.53(d,J=16.0Hz,1H),4.17-4.09(m,2H),4.09-3.96(m,3H),3.84-3.81(m,1H),3.62-3.54(m,3H),3.40-3.38(m,2H),3.18(s,3H).MS(ESI)m/z:648.7[M-H] -.
Example 5: o- (((2R,3S,5R) -5- (2-amino-6-oxo-1, 6-dihydro-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -sodium thiophosphate
Step 1: o- (((2R,3S,5R) -3- ((tert-butyldiphenylsilyl) oxy) -5- (2-isobutyrylamino-6-oxo-1, 6-dihydro-9H-purin-9-yl) tetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- (((tert-butyldiphenylsilyl) oxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O-hydro (S) -thiophosphate
1- ((2R,3R,4R,5R) -5- (((tert-butyldiphenylsilyl) oxy) methyl) -3- (2-methoxyethoxy) -4- (((2R,3aS,6R,7aS) -3 a-methyl-6- (prop-1-en-2-yl) -2-sulfonylhexahydrobenzo [ d ] [1,3,2] oxathiolan-2-yl) oxy) tetrahydrofuran-2-yl) pyrimidine-2, 4- (1H,3H) -dione (1.50g) and N- (9- ((2R,4S,5R) -4- ((tert-butyldiphenylsilyl) oxy) -5- (hydroxymethyl) tetrahydrofuran-2-yl) -6-oxo-6, 9-dihydro-1H-purin-2-yl) isobutyramide (2.20g) was dissolved in acetonitrile (20ml), and 2,3,4,6,7,8,9, 10-octahydropyrimido [1,2-a ] azepine (0.87g) was added at room temperature, stirred and reacted for 1H. The reaction solution was diluted with ethyl acetate, washed successively with a saturated aqueous sodium bicarbonate solution and a saturated brine, and the organic phase was dried over anhydrous sodium sulfate, filtered and concentrated to give a crude product, which was purified by column chromatography (dichloromethane: methanol ═ 10:1) to give the title compound (2.10 g).
1H NMR(500MHz,DMSO-d 6):δ12.12(s,1H),12.04(s,1H),11.41(s,1H),8.29(s,1H),7.66(d,J=7.0Hz,2H),7.63-7.57(m,7H),7.48-7.38(m,12H),6.35-6.32(m,1H),5.84(d,J=6.0Hz,1H),5.25(d,J=8.0Hz,1H),4.96-4.92(m,1H),4.71(d,J=4.0Hz,1H),4.09-4.01(m,3H),3.86-3.70(m,5H),3.53-3.49(m,1H),3.37-3.36(m,2H),3.13(s,3H),2.95-2.90(m,1H),2.85-2.80(m,1H),2.14-2.10(m,1H),1.11(d,J=7.5Hz,3H),1.07(d,J=7.5Hz,3H),1.05(s,9H),1.01(s,9H).
Step 2: o- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H-yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O- (((2R,3S,5R) -3-hydroxy-5- (2-isobutyrylamino-6-oxo-1, 6-dihydro-9H-purin-9-yl) tetrahydrofuran-2-yl) methyl) (S) -tetrabutylammonium thiophosphate
To a reaction flask were added O- (((2R,3S,5R) -3- ((tert-butyldiphenylsilyl) oxy) -5- (2-isobutyrylamino-6-oxo-1, 6-dihydro-9H-purin-9-yl) tetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -2- (((tert-butyldiphenylsilyl) oxy) methyl) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O-hydro (S) -thiophosphate (1.80g) in this order, Tetrabutylammonium fluoride trihydrate (1.43g) and tetrahydrofuran (20ml), and the reaction solution was stirred overnight at room temperature. The reaction was diluted with water, washed with diethyl ether and the aqueous phase was concentrated to give the title compound 2.20g which was directly used in the next step without purification.
And step 3: o- (((2R,3S,5R) -5- (2-amino-6-oxo-1, 6-dihydro-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate
O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H-yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) O- (((2R,3S,5R) -3-hydroxy-5- (2-isobutyrylamino-6-oxo-1, 6-dihydro-9H-purin-9-yl) tetrahydrofuran-2-yl) methyl) (S) -tetrabutylammonium thiophosphate (2.20g) is dissolved in aqueous ammonia (15ml), stirred at 40 ℃ and reacted for 36H under ice-bath, the reaction solution is adjusted to pH 8 with 50% aqueous acetic acid solution, the reaction solution was washed with ethyl acetate. The aqueous phase was separated and purified by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to give the title compound (0.17 g).
MS(ESI)m/z:646.6[M-H] -.
And 4, step 4: o- (((2R,3S,5R) -5- (2-amino-6-oxo-1, 6-dihydro-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -sodium thiophosphate
O- (((2R,3S,5R) -5- (2-amino-6-oxo-1, 6-dihydro-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (0.30g), sodium ion exchange resin (6.0g) and deionized water (5ml) were added to the reaction flask in this order, and stirred at room temperature for 1H. Filtration and purification of the aqueous phase by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) gave the title compound (0.16g) after concentration.
1H NMR(500MHz,DMSO-d 6):δ11.11(brs,2H),7.97(s,1H),7.89(d,J=8.0Hz,1H),6.55(s,2H),6.16-6.13(m,1H),5.85(d,J=5.5Hz,1H),5.67(d,J=8.5Hz,1H),5.31(s,1H),5.24(s,1H),4.73-4.71(m,1H),4.42(s,1H),4.15(s,1H),4.02(t,J=5.0Hz,1H),3.96-3.92(m,3H),3.83-3.81(m,1H),3.62(s,2H),3.56-3.54(m,1H),3.39-3.38(m,2H),3.18(s,3H),2.63-2.58(m,1H),2.19-2.15(m,1H).MS(ESI)m/z:646.6[M-H] -.
Example 6: (((R) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylisopropyl carbonate
Step 1: o- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R)) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) ammonium thiophosphate
Starting from O- (((2R,3S,5R) -5- (6-benzoylamino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- (2-cyanoethyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) thiophosphate, the procedure of step 8 in reference example 1 gave the title compound. HRMS (ESI) M/z 632.1539[ M + H ]] +.
Step 2: ((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylisopropyl carbonate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R)) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) ammonium thiophosphate (1.56g) was dissolved in a mixed solution of water (150ml) and isopropanol (39ml), iodomethylisopropyl carbonate (1.761g) was added dropwise, and the mixture was subjected to reverse osmosis at room temperatureAfter 24h, it was concentrated to remove isopropanol and the residue was extracted three times with n-hexane. The aqueous phase was separated and purified by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to give the title compound (1.39 g). MS (ESI) M/z 748.2[ M + H ]] +.
And step 3: (((R) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylisopropyl carbonate
((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylisopropyl carbonate (1.39g) was resolved by YMC high pressure preparative chromatography (column: CHIRAL ART Amylose-SA, 5 μm, 30X 250 mm; mobile phase: absolute ethanol and n-hexane (50% n-hexane isocratically eluted for 45 minutes); a detector: UV 254nm) to give the title compound (0.527 g).
1H NMR(500MHz,CD 3OD):δ8.32(s,1H),8.24(s,1H),8.01(d,J=8.0Hz,1H),6.49(t,J=6.5Hz,1H),6.03(d,J=6.0Hz,1H),5.74(d,J=8.0Hz,1H),5.53-5.46(m,2H),5.10-5.05(m,1H),4.90-4.87(m,1H),4.74-4.70(m,1H),4.52-4.46(m,1H),4.44-4.40(m,1H),4.38-4.35(m,1H),4.31-4.24(m,2H),3.82-3.76(m,3H),3.75-3.71(m,1H),3.53-3.48(m,2H),3.29(s,3H),2.99-2.91(m,1H),2.56-2.50(m,1H),1.27-1.24(m,6H).HRMS(ESI)m/z:748.2002[M+H] +.
Example 7: (((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylisopropyl carbonate
The title compound (0.456g) was additionally obtained by following the procedure of example 6, step 3.
1H NMR(500MHz,CD 3OD):δ8.35(s,1H),8.24(s,1H),8.01(d,J=8Hz,1H),6.50(t,J=6.5Hz,1H),6.06(d,J=6Hz,1H),5.74(d,J=8Hz,1H),5.50-5.42(m,2H),5.13-5.08(m,1H),4.90-4.88(m,1H),4.74-4.70(m,1H),4.54-4.46(m,2H),4.36(t,J=5.5Hz,1H),4.31-4.28(m,1H),4.26-4.23(m,1H),3.86-3.77(m,3H),3.73-3.68(m,1H),3.50-3.44(m,2H),3.25(s,3H),2.96-2.89(m,1H),2.56-2.50(m,1H),1.28(s,3H),1.27(d,J=6.5Hz,6H).
HRMS(ESI)m/z:748.2034[M+H] +.
Example 8: ((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylpent-3-ylcarbonate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (120ml) and isopropanol (30ml), iodomethylpent-3-yl carbonate (0.935g) was added dropwise, reacted at room temperature for 24H, and concentrated to remove the isopropanol. The aqueous phase was extracted three times with n-hexane, and then separated and purified by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1), and concentrated to obtain the title compound (0.400 g).
1H NMR(500MHz,CD 3OD):δ8.35(s,1H),8.24(s,1H),8.00(d,J=8.0Hz,1H),6.50(t,J=6.5Hz,1H),6.06(d,J=6.5Hz,1H),5.74(d,J=8.0Hz,1H),5.55-5.43(m,2H),5.17-5.09(m,1H),4.74-4.69(m,1H),4.63-4.57(m,1H),4.55-4.46(m,2H),4.39-4.35(m,1H),4.32-4.29(m,1H),4.27-4.22(m,1H),3.87-3.74(m,3H),3.73-3.66(m,1H),3.51-3.41(m,2H),3.25(s,3H),2.95-2.87(m,1H),2.58-2.50(m,1H),1.69-1.53(m,4H),0.89(t,J=7.0Hz,6H).MS(ESI)m/z:776.5[M+H] +.
Example 9: (((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methyl isobutyl carbonate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (100ml) and isopropanol (26ml), iodomethyl isobutyl carbonate (0.887g) was added dropwise and reacted at room temperature for 24 hours. The mixture was concentrated to remove isopropanol, and the aqueous phase was extracted three times with n-hexane and then subjected to separation and purification by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to obtain the title compound (0.419g) after concentration.
1H NMR(500MHz,CD 3OD):δ8.35(s,1H),8.24(s,1H),8.00(d,J=8.0Hz,1H),6.50(t,J=6.5Hz,1H),6.06(d,J=6.0Hz,1H),5.74(d,J=8.0Hz,1H),5.50-5.46(m,2H),5.13-5.10(m,1H),4.74-4.70(m,1H),4.59-4.45(m,2H),4.36(t,J=5.5Hz,1H),4.31-4.29(m,1H),4.25-4.24(m,1H),3.94(d,J=6.5Hz,2H),3.85-3.68(m,4H),3.52-3.45(m,2H),3.25(s,3H),2.95-2.89(m,1H),2.56-2.51(m,1H),1.94-1.88(m,1H),0.91(d,J=6.5Hz,6H).MS(ESI)m/z:760.6[M+H] +.
Example 10: (((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methyl (2-ethylbutyl) carbonate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (120ml) and isopropanol (30ml), and 2-ethylbutyl (iodomethyl) carbonate (0.983g) was added dropwise and reacted at room temperature for 24 hours. The mixture was concentrated to remove isopropanol, and the aqueous phase was extracted three times with n-hexane and then subjected to separation and purification by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to obtain the title compound (0.440g) after concentration.
1H NMR(500MHz,CD 3OD):δ8.35(s,1H),8.24(s,1H),8.00(d,J=8.0Hz,1H),6.50(t,J= 6.5Hz,1H),6.06(d,J=6.5Hz,1H),5.74(d,J=8.5Hz,1H),5.54-5.45(m,2H),5.14-5.08(m,1H),4.74-4.69(m,1H),4.56-4.45(m,2H),4.39-4.34(m,1H),4.32-4.29(m,1H),4.26-4.22(m,1H),4.12-4.07(m,2H),3.86-3.81(m,1H),3.80-3.75(m,2H),3.74-3.68(m,1H),3.51-3.42(m,2H),3.25(s,3H),2.95-2.87(m,1H),2.57-2.50(m,1H),1.53-1.44(m,1H),1.37-1.26(m,4H),0.88(t,J=7.5Hz,6H).MS(ESI)m/z:790.6[M+H] +.
Example 11: (((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methylneopentyl carbonate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (120ml) and isopropanol (30ml), iodomethyl neopentyl carbonate (0.935g) was added dropwise, and reacted at room temperature for 24 hours. The mixture was concentrated to remove isopropanol, and the aqueous phase was extracted three times with n-hexane and then subjected to separation and purification by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to obtain the title compound (0.250g) after concentration.
1H NMR(500MHz,CD 3OD):δ8.35(s,1H),8.25(s,1H),8.00(d,J=8.0Hz,1H),6.50(t,J=6.0Hz,1H),6.06(d,J=6.0Hz,1H),5.74(d,J=8.0Hz,1H),5.54-5.44(m,2H),5.16-5.08(m,1H),4.75-4.69(m,1H),4.56-4.45(m,2H),4.40-4.35(m,1H),4.33-4.29(m,1H),4.26-4.22(m,1H),3.90-3.86(m,2H),3.84-3.76(m,3H),3.74-3.69(m,1H),3.52-3.42(m,2H),3.26(s,3H),2.97-2.88(m,1H),2.59-2.49(m,1H),0.92(s,9H).HRMS(ESI)m/z:776.2350[M+H] +.
Example 12: ((S) - ((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methyl (cyclopropylmethyl) carbonate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (100ml) and isopropanol (26ml), cyclopropylmethyl (iodomethyl) carbonate (0.880g) was added dropwise and reacted at room temperature for 24 hours. The mixture was concentrated to remove isopropanol, and the aqueous phase was extracted three times with n-hexane and then subjected to separation and purification by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to obtain the title compound (0.400g) after concentration.
1H NMR(500MHz,CD 3OD)δ8.35(s,1H),8.24(s,1H),8.01(d,J=8.0Hz,1H),6.50(t,J=6.5Hz,1H),6.06(d,J=6.0Hz,1H),5.75(d,J=8.0Hz,1H),5.49-5.45(m,2H),5.16-5.06(m,1H),4.74-4.71(m,1H),4.54-4.46(m,2H),4.36(t,J=5.5Hz,1H),4.32-4.29(m,1H),4.26-4.23(m,1H),4.03-3.96(m,2H),3.86-3.67(m,4H),3.50-3.43(m,2H),3.25(s,3H),2.93-2.91(m,1H),2.56-2.52(m,1H),1.18-1.10(m,1H),0.58-0.51(m,2H),0.31-0.29(m,2H).
MS(ESI)m/z:760.6[M+H] +.
Example 13: (((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) methyl isobutyrate
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (120ml) and isopropanol (30ml), iodomethyl isobutyrate (0.784g) was added dropwise, and reacted at room temperature for 24 hours. The mixture was concentrated to remove isopropanol, and the aqueous phase was extracted three times with n-hexane and then subjected to separation and purification by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to obtain the title compound (0.330g) after concentration.
1H NMR(500MHz,CD 3OD):δ8.34(s,1H),8.24(s,1H),8.01(d,J=8.0Hz,1H),6.50(t,J=6.5Hz,1H),6.06(d,J=6.0Hz,1H),5.74(d,J=8.0Hz,1H),5.42-5.38(m,2H),5.10(s,1H),4.72(s,1H),4.49-4.47(m,2H),4.37(s,1H),4.28(s,1H),4.24(s,1H),3.82-3.80(m,2H),3.76-3.69(m,2H),3.51-3.44(m,2H),3.26(s,3H),2.97-2.92(m,1H),2.59-2.51(m,2H),1.14-1.12(m,6H).MS(ESI)m/z:732.5[M+H] +.
Example 14: (((S) - (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methoxy) ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) oxy) phosphoryl) thio) pivalic acid methyl ester
O- (((2R,3S,5R) -5- (6-amino-9H-purin-9-yl) -3-hydroxytetrahydrofuran-2-yl) methyl) O- ((2R,3R,4R,5R) -5- (2, 4-dioxo-3, 4-dihydropyrimidin-1 (2H) -yl) -2-hydroxymethyl-4- (2-methoxyethoxy) tetrahydrofuran-3-yl) (S) -tetrabutylammonium thiophosphate (1.0g) was dissolved in a mixed solution of water (120ml) and isopropanol (30ml), iodomethyl pivalate (0.832g) was added dropwise, and the reaction was carried out at room temperature for 24 hours. The mixture was concentrated to remove isopropanol, and the aqueous phase was extracted three times with n-hexane and then subjected to separation and purification by Biotage C18120 g reverse phase chromatography (water: acetonitrile 3:1) to obtain the title compound (0.550g) after concentration.
1H NMR(500MHz,CD 3OD):δ8.34(s,1H),8.24(s,1H),8.00(d,J=8.0Hz,1H),6.49(t,J=6.5Hz,1H),6.06(d,J=6.0Hz,1H),5.74(d,J=8.5Hz,1H),5.43(s,1H),5.39(s,1H),5.11-5.09(m,1H),4.72-4.71(m,1H),4.50-4.47(m,2H),4.36(t,J=5.5Hz,1H),4.28-4.27(m,1H),4.24-4.23(m,1H),3.84-3.80(m,2H),3.76-3.69(m,2H),3.51-3.44(m,2H),3.26(s,3H),2.98-2.93(m,1H),2.56-2.51(m,1H),1.18(s,9H).MS(ESI)m/z:746.6[M+H] +.
Screening for in vitro anti-hepatitis B virus activity
1. Experimental Material
1.1 cells
HepG2.2.15 cells
1.2 Compounds
Test compounds: the resulting compound was prepared in 20mM stock solution in dimethyl sulfoxide (DMSO).
1.3 reagents
Reagents used in this experiment included QIAamp 96 DNA Blood Kit (12) (Cat Qiagen-51162), FastStart Universal Probe Master (Cat Roche-04914058001), CellTiter-Blue detection reagent (Cat Promega-G808B).
2. Experimental methods
2.1 dilution of the compound: the test compound was always at a concentration of 100. mu.M, 3-fold dilution, 8 concentrations.
3.2. In vitro anti-HBV activity assay and cytotoxicity assay: the first day, HepG2.2.15 cells (4X 10) were seeded4Cells/well) to 96-well plates at 37 ℃, 5% CO2The culture was carried out overnight. The following day, fresh medium containing different concentrations of the compounds was added to the culture wells. On the third to ten days, old culture medium in the culture wells was aspirated every day, and fresh culture medium containing compounds at various concentrations was added. The eleventh day, the supernatant in the culture well was collected for extracting HBV DNA in the supernatant. The qPCR experiment detects the HBV DNA content in the supernatant of HepG2.2.15. After collecting cell supernatant, adding CellTiter-Blue reagent, and detecting the fluorescence value of each hole by an enzyme-labeling instrument after incubation.
Percent inhibition:
inhibition [% ], or ] -% ] 0..
Percent cell viability:
cell viability = (fluorescence of sample wells-fluorescence of media control)/(fluorescence of DMSO control-fluorescence of media control) × 100%.
The results of the experiment are shown in table 1.
Table 1.
EXAMPLES Compounds | EC 50(nM) | CC 50(μM) |
Example 1 | 5239 | >100 |
Example 2 | 6355 | >100 |
Claims (12)
- A compound of formula I, tautomers, stereoisomers, or pharmaceutically acceptable salts thereof,wherein R is1Is selected fromAnd R is selected from C1-12Alkyl radical, C1-12Alkoxy radical, C2-6Alkenyl radical, C2-6Alkynyl, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, said R being optionally substituted with one or more groups selected from: halogen, -OH, C1-6Alkyl, - (OCH)2CH 2) m-OC 1-6Alkyl, -NO2、-CN、-NH 2、-NH(C 1-6Alkyl), -N (C)1-6Alkyl radical)2、-C(O)C 1-6Alkyl, -C (O) OC1-6Alkyl, -CONHC1-6Alkyl, -SH, -SC1-6Alkyl radical, C3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl, wherein m is selected from 0, 1,2,3,4 or 5;R 2selected from H, -OH, halogen, C1-6Alkyl radical, C1-6Alkoxy radical, C3-10Cycloalkyl, 3-10 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl;R 4selected from H, C1-6Alkyl radical, C3-6Cycloalkyl or 3-6 membered heterocycloalkyl.
- The compound of any one of claims 1-2, wherein m is selected from 0, 1,2, or 3; or m is selected from 0, 1 or 2; or m is 0.
- The compound of any one of claims 1-3, wherein R is selected from C1-6Alkyl radical, C1-6Alkoxy radical, C2-6Alkenyl or C2-6Alkynyl, said R being optionally substituted with one or more groups selected from- (OCH)2CH 2) m-OCH 3、C 3-6Cycloalkyl, 3-6 membered heterocycloalkyl, C6-10Aryl or 5-10 membered heteroaryl; or R is selected from C1-6Alkyl or C1-6Alkoxy, and said R is optionally substituted with one or more C3-6Cycloalkyl substitution; or R is selected from (CH)3) 2CHO-、(CH 3CH 2) 2CHO-、(CH 3) 2CHCH 2O-、(CH 3CH 2) 2CHCH 2O-、(CH 3) 3CCH 2O-, cyclopropyl-CH2O-、(CH 3) 2CH-or (CH)3) 3C-。
- The compound of any one of claims 1-4, wherein R2Selected from H, -OH or halogen; or R2Selected from H or halogen; or R2Selected from H or fluorine; or R2Is H.
- The compound of any one of claims 1-5, wherein R4Is selected from C1-6An alkyl group; or R4Is selected from C1-3An alkyl group; or R4Is methyl.
- a pharmaceutical composition comprising a compound of any one of claims 1-8, a tautomer, stereoisomer, or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable adjuvant.
- A method of treating or inhibiting HBV infection in a mammal comprising administering to the mammal in need thereof a therapeutically effective amount of a compound of any one of claims 1 to 8, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of claim 9.
- Use of a compound of any one of claims 1-8, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of claim 9, in the manufacture of a medicament for the prevention or treatment of HBV infection in a mammal; optionally, the preventing or treating of HBV infection in a mammal refers to controlling, reducing or eliminating HBV to prevent, ameliorate or cure liver disease in an infected mammal.
- A compound of any one of claims 1-8, a tautomer, a stereoisomer, or a pharmaceutically acceptable salt thereof, or a pharmaceutical composition of claim 9 for use in the prevention or treatment of HBV infection in a mammal; optionally, the preventing or treating HBV infection in a mammal refers to controlling, reducing or eliminating HBV to prevent, ameliorate or cure liver disease in an infected mammal.
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