CN112940133A - Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof - Google Patents

Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof Download PDF

Info

Publication number
CN112940133A
CN112940133A CN202110383273.9A CN202110383273A CN112940133A CN 112940133 A CN112940133 A CN 112940133A CN 202110383273 A CN202110383273 A CN 202110383273A CN 112940133 A CN112940133 A CN 112940133A
Authority
CN
China
Prior art keywords
protein
atrx
monoclonal antibody
amino acid
cell strain
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Granted
Application number
CN202110383273.9A
Other languages
Chinese (zh)
Other versions
CN112940133B (en
Inventor
陈惠玲
杨清海
王小亚
林婷
王丹
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Fuzhou Maixin Biotechnology Development Co ltd
Original Assignee
Fuzhou Maixin Biotechnology Development Co ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Fuzhou Maixin Biotechnology Development Co ltd filed Critical Fuzhou Maixin Biotechnology Development Co ltd
Priority to CN202110383273.9A priority Critical patent/CN112940133B/en
Publication of CN112940133A publication Critical patent/CN112940133A/en
Application granted granted Critical
Publication of CN112940133B publication Critical patent/CN112940133B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/40Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against enzymes
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/573Immunoassay; Biospecific binding assay; Materials therefor for enzymes or isoenzymes
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/577Immunoassay; Biospecific binding assay; Materials therefor involving monoclonal antibodies binding reaction mechanisms characterised by the use of monoclonal antibodies; monoclonal antibodies per se are classified with their corresponding antigens
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/50Immunoglobulins specific features characterized by immunoglobulin fragments
    • C07K2317/56Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2317/00Immunoglobulins specific features
    • C07K2317/90Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
    • C07K2317/92Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/20Fusion polypeptide containing a tag with affinity for a non-protein ligand
    • C07K2319/21Fusion polypeptide containing a tag with affinity for a non-protein ligand containing a His-tag
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K2319/00Fusion polypeptide
    • C07K2319/20Fusion polypeptide containing a tag with affinity for a non-protein ligand
    • C07K2319/23Fusion polypeptide containing a tag with affinity for a non-protein ligand containing a GST-tag
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N2333/00Assays involving biological materials from specific organisms or of a specific nature
    • G01N2333/90Enzymes; Proenzymes
    • G01N2333/914Hydrolases (3)

Landscapes

  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Immunology (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Biomedical Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Hematology (AREA)
  • Medicinal Chemistry (AREA)
  • Urology & Nephrology (AREA)
  • Organic Chemistry (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Genetics & Genomics (AREA)
  • Microbiology (AREA)
  • Wood Science & Technology (AREA)
  • Pathology (AREA)
  • Zoology (AREA)
  • Food Science & Technology (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • General Physics & Mathematics (AREA)
  • Cell Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biophysics (AREA)
  • General Engineering & Computer Science (AREA)
  • Peptides Or Proteins (AREA)
  • Preparation Of Compounds By Using Micro-Organisms (AREA)

Abstract

The invention relates to a monoclonal antibody capable of recognizing human ATRX antigen, a secretory cell strain, a preparation method thereof and application thereof in immunoassay. In the technical scheme, 2273-2413 amino acids at the C terminal of the ATRX protein are selected as antigen peptides to perform codon optimization to obtain a gene fragment suitable for expression in escherichia coli BL21(DE3), and the finally obtained recombinant protein comprises a GST protein tag, an ATRX protein fragment and a histidine protein tag. The recombinant protein is used for immunizing a mouse, and a mouse hybridoma cell strain 20A2 capable of efficiently secreting the ATRX protein-resistant monoclonal antibody and the ATRX protein-resistant monoclonal antibody secreted by the cell strain are obtained through cell fusion, screening and subcloning. The antibody obtained by the scheme has high specificity and sensitivity, can specifically recognize cells expressing ATRX protein, and is suitable for immunological detection, particularly immunohistochemical detection.

Description

Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof
Technical Field
The invention relates to the field of biomedical engineering, in particular to an ATRX protein resistant monoclonal antibody, a cell strain, a preparation method and application thereof.
Background
ATRX (X linked alpha chromatin/mental remodeling) is a chromatin remodeling protein, plays an important role in the processes of gene expression, DNA repair, replication and the like, and is mainly located in a heterochromatin region which is easy to form a special secondary structure (such as a G-quadruplet) and is rich in GC base. Studies have shown that ATRX proteins regulate gene expression primarily through binding to other regulatory factors.
Tumor cells generally have the ability to divide indefinitely, and maintaining telomere length is a requirement. Studies have shown that there are two ways to maintain telomere length in cells: (1) telomerase maintains telomere length; (2) the telomere replacement elongation (ALT) mechanism. The ALT mechanism does not rely on telomerase, but maintains telomere length by means of homologous recombination. Approximately 85% of human tumors use the activation pathway of telomerase to maintain telomere length. About 15% of other tumors rely on alternative lengthening mechanisms of telomeres. The ALT mechanism is commonly found in mesenchymal cell-derived tumors, including gliomas, osteosarcomas, liposarcomas, and the like. Studies have shown that telomerase pathway and ALT mechanisms can be interconverted in tumor cells. Thus, there is a need for alternative protracting mechanisms that inhibit both telomerase and telomere for tumor therapy.
It has been found that ATRX gene mutation exists in pancreatic endocrine cell tumors. In 2011, 61% of Heaphy and colleagues found out that the pancreatic endocrine tumor expresses ALT, and 100% of the pancreatic endocrine tumors expressing ALT have ATRX gene mutation or ATRX nuclear expression deletion. In 2012, Lovejoy et al found that about 90% of 22 ALT positive non-tumor cell lines had ATRX deletions. Recent studies have found that restored expression of ATRX inhibits the associated phenotype of alternative elongation mechanisms of telomeres. The above phenomena suggest that ATRX may play an important role in the development of the ALT mechanism.
Disclosure of Invention
The invention provides an anti-ATRX monoclonal antibody, which is produced by a hybridoma cell strain with the preservation number of CGMCC NO 20772.
Further, the monoclonal antibody specifically recognizes the ATRX protein.
Further, the DNA sequence of the heavy chain variable region of the monoclonal antibody is the nucleotide sequence shown in SEQ ID2, and the DNA sequence of the light chain variable region of the monoclonal antibody is the nucleotide sequence shown in SEQ ID 3.
Further, the amino acid sequence of the heavy chain variable region of the monoclonal antibody is the amino acid sequence shown as SEQ ID 4; the amino acid sequence of the monoclonal antibody light chain variable region is the amino acid sequence shown as SEQ ID 5.
Further, the monoclonal antibody is mouse IgG2aSubtype monoclonal antibodies.
The inventor also provides a preparation method of the anti-ATRX protein monoclonal antibody, an antigen used for immunizing a mouse is recombinant protein, the recombinant protein is expressed by escherichia coli in a recombinant mode, the recombinant protein comprises a GST protein tag, an ATRX protein fragment and a histidine protein tag, and the amino acid sequence of the recombinant protein is the amino acid sequence shown in SEQ ID No. 1.
Further, the ATRX protein fragment is the amino acid fragment from 2273 th position to 2413 th position of the ATRX protein.
The inventor also provides a hybridoma cell strain secreting ATRX-resistant protein molecules, wherein the cell strain is a mouse hybridoma cell strain 20A2, the cell strain is preserved in China general microbiological culture Collection center (CGMCC) at 9 and 17 days 2020, has the preservation number of CGMCC NO 20772 and is addressed to the institute of microbiology of China academy of sciences No. 3 of North West Lu 1 of the sunward area in Beijing.
The inventor also provides the application of the monoclonal antibody in the ATRX protein immunoassay.
Further, the immunodetection includes immunohistochemistry, immunoblotting and enzyme-linked immunoassay.
Different from the prior art, the invention has the beneficial technical effects that: in the technical scheme, 2273-2413 amino acids at the C terminal of the ATRX protein are selected as antigen peptides to perform codon optimization to obtain a gene fragment suitable for expression in escherichia coli BL21(DE3), and the finally obtained recombinant protein comprises a GST protein tag, an ATRX protein fragment and a histidine protein tag. The recombinant protein is used for immunizing a mouse, and a mouse hybridoma cell strain 20A2 capable of efficiently secreting the ATRX protein-resistant monoclonal antibody and the ATRX protein-resistant monoclonal antibody secreted by the cell strain are obtained through cell fusion, screening and subcloning. The antibody obtained by the scheme has high specificity and sensitivity, can specifically recognize cells expressing ATRX protein, and is suitable for immunological detection, particularly immunohistochemical detection.
Drawings
FIG. 1 is a graph of purified pectin of recombinant ATRX protein fused with histidine tag in example 1, wherein M represents Marker; 1 is a supernatant sample after ultrasonic treatment; and 2 is a post-sonication sedimentation sample.
FIG. 2 is a graph comparing immunohistochemical staining results for pancreatic neuroendocrine tumors; the left is ATRX secreted by 20A2, and the right is ATRX sold on the market.
FIG. 3 is a graph comparing immunohistochemical staining results of brain glioma; the left is ATRX secreted by 20A2, and the right is ATRX sold on the market.
FIG. 4 is a graph comparing immunohistochemical staining results of skin groups; the left is ATRX secreted by 20A2, and the right is ATRX sold on the market.
Detailed Description
To explain technical contents, structural features, and objects and effects of the technical solutions in detail, the following detailed description is given with reference to the accompanying drawings in conjunction with the embodiments.
EXAMPLE 1 preparation of recombinant ATRX protein fragments
First, gene optimization and synthesis
ATRX protein fragments of 2273-2413 amino acid residues were selected according to the protein sequence of accession number P46100 in the Uniprot database and directly optimized into a gene fragment suitable for expression in E.coli BL21(DE 3). EcoR I and XhoI cleavage sites were added at the 5 'and 3' ends of the gene, respectively, during PCR.
And separating the PCR product by agarose gel electrophoresis, recovering, carrying out EcoR I and XhoI enzyme digestion on the recovered fusion protein gene and a plasmid vector Pet30a-GST for expression, carrying out electrophoresis recovery again, and connecting by T4 DNA ligase. The ligation product was transformed into E.coli competent cells BL21(DE3), and the colonies on the plate were picked and inoculated for PCR identification of the bacterial suspension. And selecting clones with positive PCR results for sequencing analysis, and using the clones with completely correct sequences.
The selection of different antigens for immunization makes it possible to prepare antibodies with different binding characteristics, the molecules present simultaneously a plurality of variants due to variable cleavage, and finally the recognition ability and pattern of different antibodies on antigen-expressing cells are different. ATRX molecules were analyzed according to published sequences, based on structure on cell membrane, antigenicity, hydrophilicity and hydrophobicity of the constituent amino acids and secondary structure, selecting regions suitable for soluble expression and good immunogenicity for recombinant expression, and selecting amino acid residues 2273-2413 of ATRX for codon optimization, with a molecular weight of about 42 kDa. The ATRX protein is obtained by using prokaryotic expression gene sequence through sequence optimization design. The recombinant immunogen consists of an ATRX protein fragment with antigenicity and a protein tag for recombinant protein purification, wherein the protein tag is GST and HIS.
II, protein expression and purification
The overnight strain cultured by a single colony is transferred to 100mL LB culture medium according to the proportion of 1:100, kanamycin with the final concentration of 10 mug/mL is added, shaking culture is carried out at 37 ℃ until OD600 is 0.6-0.8, 1mmol/L IPTG is added, shaking culture is carried out at 16 ℃ for overnight, and the strain is collected and then is crushed by ultrasound. The recombinant protein is provided with a histidine tag, and affinity purification of the protein is performed by using a nickel column. Elution was carried out with 500mmol/L imidazole and SDS PAGE separation was carried out.
FIG. 1 is a graph of purified pectin of recombinant ATRX protein fused with histidine tag. The protein concentration is 0.5mg/mL, and the protein can be used for requirements of animal immunization and antibody screening and identification.
EXAMPLE 2 establishment of hybridoma cell lines
Immunization
The crosslinked polypeptides of example 1 were emulsified with Freund's complete adjuvant (Sigma, F5881), and 4-6 week old female ICR mice (purchased from Beijing Wintolite laboratory animals technologies, Inc.) were immunized and injected ventrally at 6 o' clock per mouse at a dose of 20. mu.g/mouse. The booster was administered every 14 days and the antigen was emulsified with Freund's incomplete adjuvant (Sigma, F5506) at a dose of 20. mu.g/mouse. 7 days after 3 times of booster immunization, the titer of multiple antibodies of the anti-immunogen in the serum of the mice is detected by indirect ELISA (wavelength of 450nm), the mice with the highest titer are injected by tail vein for impact immunization, and the antigen is uniformly mixed by normal saline, and the dosage is 50 mu g/mouse.
Second, cell fusion
A mouse spleen cell suspension with qualified immunity is prepared aseptically, mixed with mouse myeloma cell sp2/0(ATCC number CRL-8287) at a ratio of 5:1, and centrifuged at 1500rpm for 5 min. The supernatant was discarded and the tube was placed in a 37 ℃ water bath, 1ml of PEG1500 (Roche) was added slowly over 1 minute, and the cells were agitated. After standing in warm water for 1min, 10ml of serum-free IMDM (Sigma Co.) was added, mixed well, and centrifuged at 1000rpm for 5 min. After discarding the supernatant, 10ml of serum (PAA) was added to the supernatant, the cells were carefully blown up, 5ml of thymocytes mixed with 10XHAT (Sigma) was added, and the mixture was mixed well. Then, 25ml of a semi-solid medium containing 2.1% nitrocellulose (Sigma) was added thereto, mixed well, and poured into 20 cell culture dishes. Placing the cell culture dish into a wet box, and adding 5% CO at 37 deg.C2Culturing in an incubator.
Cloning and ELISA screening of positive hybridoma cells
The size and density of the clone cell mass are moderate 7 days after fusion, and the round, solid and large clone mass is sucked under a dissecting mirror and is injected into a 96-hole culture plate which is prepared with a culture medium in advance, and the culture is carried out in a 5% CO2 incubator at 37 ℃. After 3 days, the cell mass was approximately 2/3 basal areas, and 100. mu.L of the supernatant was screened by ELISA using the immunogen and the synthetic polypeptide, respectively. Positive clones were completely replaced and 200. mu.L of complete medium containing feeder cells and 1% HT (Sigma) was added. Two days later, a second ELISA screening was performed and positive clones were transferred to 24-well plates previously prepared in medium (containing feeder cells and HT). After five days, 100 μ l of supernatant was subjected to a third ELISA screening, and the positive clones were transferred to 6-well plates and cell culture flasks successively for expanded culture and frozen.
EXAMPLE 3 preparation of monoclonal antibody by ascites Induction method
First, preparation of ascites
Cells in logarithmic growth phase were washed with serum-free medium and suspended, and counted at about 5X 105And 1 ml. The suspended cells were injected intraperitoneally into mice previously sensitized with paraffin oil. Ascites collection was started 7 days later. The ascites fluid taken out was centrifuged at 4000rpm at 4 ℃ for 10 min. The ascites fluid in the middle is carefully aspirated and collected in a centrifuge tube and stored at 4 ℃ or-20 ℃.
Secondly, purification of monoclonal antibody
Antibodies were purified from ascites fluid by HiTrap rProtein A FF (GE) affinity chromatography as described. Purity was assessed on SDS-PAGE gels and concentration was determined by Bradford method. Purified antibody was stored at-20 ℃.
EXAMPLE 4 characterization of monoclonal antibodies
First, subclass identification
Coated goat anti-mouse IgG (Beijing China fir Jinqiao Biotechnology Co., Ltd.) was diluted to 0.5. mu.g/ml with 100. mu.l/well at 4 ℃ overnight in 100mM PBS (pH 7.4). The liquid was decanted, washed 3 times with PBS containing 0.05% Tween (PBS-T), 200. mu.l of blocking solution (PBS containing 2% BSA and 3% sucrose) was added to each well, and incubated at 37 ℃ for 1 h. The liquid was decanted and washed 3 times with PBS-T. 0.1ml of hybridoma supernatant was added to each well and incubated at 37 ℃ for 1 h. The decanted solution was washed 3 times with PBS-T. Using a confining liquid 1: 1000 dilution HRP-labeled goat anti-mouse (kappa, lambda)Antibody or 1: HRP-labeled goat anti-mouse (IgM, IgG1, IgG2a, IgG2b, IgG3, IgA) antibodies (Southern Biotech) were diluted at 2000 in 0.1ml per well and added to the appropriate wells, followed by incubation at 37 ℃ for 1 hour. The liquid was decanted and washed 3 times with PBS-T. Add 50. mu.l of 0.15% ABTS (Southern Biotech) and 0.03% H per well2O2The reaction was performed in the citric acid buffer (pH4.0), and the OD value at a wavelength of 405nm was measured within 10 to 20 min.
The results show that the monoclonal antibody of the invention is IgG2aType murine monoclonal antibodies.
Second, determination of affinity constant
The ATRX recombinant protein prepared in example 1 was coated at a concentration of 2. mu.g/ml, 100. mu.l/well, coated overnight at 4 ℃ and washed 3 times with PBS-T. Add 200. mu.l of blocking solution to each well and block for 2h at 37 ℃ and wash 3 times with PBS-T. The monoclonal antibody purified in example 3 was prepared from 1: 200 began a 2-fold gradient dilution, and finally 1 well was blank, incubated at 37 ℃ for 1h, and washed 3 times with PBS-T. HRP-labeled goat anti-mouse secondary antibody 1: 20000 dilution, 100 μ l per well, incubation at 37 ℃ for 1h, PBS-T wash 3 times. Mu.l of a buffer containing 0.1% TMB (Sigma) and 0.03% H was added to each well2O2The reaction mixture was developed in a citric acid-phosphoric acid buffer for 10min, and 50. mu.l of a 0.5M sulfuric acid solution was added thereto to terminate the reaction. And measuring the light absorption value with the wavelength of 450nm by using a microplate reader. The OD value is plotted against the dilution factor of the antibody, the dilution factor A corresponding to half of the maximum binding OD value is found, and the affinity constant of the antibody is calculated to be 7.68X 10 by using the following formula9
Figure BDA0003013868710000071
Reaction specificity and application effect of monoclonal antibody
The ATRX recombinant protein prepared in example 1 was used to detect the recognition specificity of the monoclonal antibody of the present invention by immunoblotting, and 12% polyacrylamide gel electrophoresis was performed. The gel protein bands were transferred to PVDF membranes (Millipore) in a Bio-Rad electrotransfer system according to the conventional method. The membrane was placed in TBS-T blocking solution containing 5% skimmed milk powder overnight at 4 ℃. Monoclonal antibodies to the antibody secreted by the 20A2 hybridoma (1: 1000 dilution) were added and incubated overnight at 4 ℃. After washing the membrane with TBS-T, add 1: a5000-diluted goat anti-mouse secondary antibody (Beijing Zhonghua Jinqiao Biotech Co., Ltd.) was incubated at room temperature for 1 hour. Washing the membrane with TBST again, adding ECL (Beijing prilley Gene technology Co., Ltd.), and collecting chemiluminescence image data with ChemiDocMP multicolor fluorescence imaging system (Bio-Rad).
Example 5 determination of variable region sequences of antibodies
Collecting fresh hybridoma cells, collecting supernatant, performing antigen binding property verification to confirm that the cell strain for cloning can indeed secrete required antibody, and centrifuging to collect 106The hybridoma cells described above. Total RNA from hybridoma cells was extracted by Trizol method, and 9. mu.L of total RNA was added with 2.5. mu.L of oligo (dT) 12-18 primer (10mM) and 5. mu.L of dNTPs, mixed well, incubated at 70 ℃ for 5 minutes and then placed on ice for 5 minutes, or denatured according to the reverse transcriptase used. Then, 5. mu.L of LRT buffer (5X), 2.5. mu.L of DTT (0.1M) and 1. mu.L of reverse transcriptase were added, and the reaction was carried out at 42 ℃ for 1 hour. The reaction was terminated by incubation at 70 ℃ for 15 minutes, and the obtained cDNA was stored at-20 ℃. The first strand cDNA thus obtained was subjected to PCR amplification, and 25pmol each of primers was added to a 50. mu.L reaction system, and the sequences of the primers for amplification of the heavy chain variable region and the light chain variable region were designed and synthesized based on the sequence of the murine monoclonal antibody primer as described in "recombinant antibody" by Hippo Seiyaku (science publishers, 2005 publications).
The rest dNTPs and buffer are added according to the conventional method, and finally 1 mu L of cDNA template and 1U of hot start Taq DNA polymerase are added. Setting PCR amplification program as 94 deg.c for 40 sec, 52 deg.c for 40 sec, 72 deg.c for 40 sec, 20-25 cycles, final extension at 72 deg.c for 3 min, and setting the product at 4 deg.c for use or direct electrophoresis. 20 μ L of PCR product was analyzed by electrophoresis, separated on 1.5% agarose gel, the length of light chain (. kappa.light chain) was between 320-340bp and the length of heavy chain was between 340-370bp, and the region-specific product was recovered by gel cutting and cloned into T-vector or expression vector for sequencing.
Example 6 immunohistochemical tissue chip staining and identification
Chip preparation process
HE sections were first stained for each sample to identify tumor sites. The tissue chip was produced using a fully automatic tissue chip machine of 3 DHISTECH. And putting the prepared tissue chip wax block into a wax block manufacturing mold, putting the mold into an oven at 68 ℃ for 10 minutes to enable the tissue core and the wax of the receptor wax block to be fused into a whole, then slightly taking the mold out of the oven, cooling the paraffin in a semi-molten state for about 30 minutes at room temperature, putting the mold into a refrigerator at-20 ℃ for freezing for 6 minutes, taking the tissue chip wax block out of the mold, and slicing or putting the tissue chip wax block into the refrigerator at 4 ℃ for storage for later use. And (3) trimming, continuously slicing, setting the thickness to be 3 mu m, floating the continuous slices in 40% alcohol, naturally unfolding, transferring the separated slices into warm water at 50 ℃ for 30 seconds, pasting the slices with a glass slide treated by polylysine, baking the prepared tissue chip in an oven at 68 ℃ for 2 hours, taking out, cooling at room temperature, and storing in a refrigerator at-4 ℃.
IHC staining and analysis
Conventional xylene dewaxing was performed 3 times for 6 minutes each, 100%, 95%, 85% gradient ethanol hydration for 3 minutes each, and finally tap water rinse. Antigen retrieval was performed and the sections were then placed in a wet box and washed 3 x 3 min with PBS. Dropwise adding 3% H2O2Incubate for 10min and wash with PBS for 3 × 3 min. Spin-drying the slices, dripping primary antibody diluted in a proper proportion (the dilution proportion of the antibody is designed according to the concentration of the antibody in the primary dilution) and incubating for 1 hour at room temperature (25 ℃), washing for 3X 3 minutes by PBS, dripping secondary antibody and incubating for 15-30 minutes at room temperature, washing for 3X 3 minutes by PBS, throwing off the PBS, and developing for 3-10 minutes by using a freshly prepared DAB developing solution. Hematoxylin counterstain for 25 seconds, PBS bluing for 30 seconds. Dehydration was carried out in a gradient of 85% (3 min) -95% (3 min) -100% (3 min) alcohol, finally xylene was transparent for 3 min, and the gel was blocked with neutral gum.
The immunohistochemical staining results were divided into: positive and negative. Positive expression must be at a specific antigenic site in cells and tissues to be considered positive. Under the condition that the tissue staining distribution is clear and the cell positioning is accurate, the staining result is further divided according to the difference of staining intensity, which is as follows:
1. the sample is weakly positive; marked "+";
2. the sample is moderately positive; marked "+";
3. the sample is highly positive; marked as "+ + +".
4. The sample was negative and marked "-".
Data statistics
1. Tumor tissue chip detection results:
the antibody ATRX (20A2) and the commercial antibody ATRX (rabbit polyclonal antibody) are synchronously detected on different human tumor tissue chips (comprising 15 cases of brain glioma and 42 cases of pancreatic neuroendocrine tumor) and the detection results are compared.
The immunohistochemical results of ATRX were counted. The whole experimental process adopts a double-blind design, and the statistical results are as follows:
Figure BDA0003013868710000091
the result shows that the monoclonal antibody of the anti-ATRX protein secreted by the 20A2 cell strain has accurate staining positioning, clear staining, no non-specific staining and clean background. In the immunohistochemical detection, the positive rate was comparable to the commercial antibody, but the positive intensity was higher than the commercial antibody. In 1 case of brain glioma and 2 cases of pancreatic neuroendocrine tumor, the staining intensity of ATRX secreted by 20A2 cell line is obviously higher than that of ATRX sold in the market, which indicates that the sensitivity is higher and the false negative result is effectively avoided.
FIG. 2 is a graph comparing immunohistochemical staining of pancreatic neuroendocrine tumors (left ATRX secreted by 20A2 and right ATRX available on the market).
FIG. 3 is a graph comparing immunohistochemical staining of brain gliomas (left ATRX secreted by 20A2 and right ATRX on the market).
2. Detection results of the normal tissue chip:
the normal tissue chip comprises 30 normal tissue samples, and the normal tissue samples are mainly selected from fresh and timely fixed operation specimens; each tissue included 3 different case samples. The 30 normal tissues include: brain, heart, cerebellum, esophagus, adrenal gland, stomach, ovary, small intestine, pancreas, colorectal, parathyroid, liver, pituitary, salivary gland, testis, kidney, thyroid, prostate, breast, uterus, spleen, bladder, tonsil, skeletal muscle, thymus (young child), skin, bone marrow, peripheral nerve, lung, mesothelial cells.
The antibody (20A2) and the commercial antibody (commercial TS1) were detected simultaneously on a normal tissue chip, and the results of the negative and positive detection were consistent, indicating that the specificity of the antibody in normal tissue was equivalent to that of the commercial antibody.
FIG. 4 is a graph comparing the results of IHC staining on skin tissue (left ATRX secreted by 20A2 and right ATRX on the market).
It is noted that, herein, relational terms such as first and second, and the like may be used solely to distinguish one entity or action from another entity or action without necessarily requiring or implying any actual such relationship or order between such entities or actions. Also, the terms "comprises," "comprising," or any other variation thereof, are intended to cover a non-exclusive inclusion, such that a process, method, article, or terminal that comprises a list of elements does not include only those elements but may include other elements not expressly listed or inherent to such process, method, article, or terminal. Without further limitation, an element defined by the phrases "comprising … …" or "comprising … …" does not exclude the presence of additional elements in a process, method, article, or terminal that comprises the element. Further, herein, "greater than," "less than," "more than," and the like are understood to exclude the present numbers; the terms "above", "below", "within" and the like are to be understood as including the number.
It should be noted that, although the above embodiments have been described herein, the invention is not limited thereto. Therefore, based on the innovative concepts of the present invention, the technical solutions of the present invention can be directly or indirectly applied to other related technical fields by making changes and modifications to the embodiments described herein, or by using equivalent structures or equivalent processes performed in the content of the present specification and the attached drawings, which are included in the scope of the present invention.
Sequence listing
<110> Fuzhou mai New Biotechnology development Co., Ltd
<120> ATRX protein resistant monoclonal antibody, cell line, preparation method and application thereof
<130> 2020
<160> 5
<170> SIPOSequenceListing 1.0
<210> 1
<211> 395
<212> PRT
<213> Artificial sequence (Artificial)
<400> 1
Met His His His His His His Gly Met Ala Ser Met Ser Pro Ile Leu
1 5 10 15
Gly Tyr Trp Lys Ile Lys Gly Leu Val Gln Pro Thr Arg Leu Leu Leu
20 25 30
Glu Tyr Leu Glu Glu Lys Tyr Glu Glu His Leu Tyr Glu Arg Asp Glu
35 40 45
Gly Asp Lys Trp Arg Asn Lys Lys Phe Glu Leu Gly Leu Glu Phe Pro
50 55 60
Asn Leu Pro Tyr Tyr Ile Asp Gly Asp Val Lys Leu Thr Gln Ser Met
65 70 75 80
Ala Ile Ile Arg Tyr Ile Ala Asp Lys His Asn Met Leu Gly Gly Cys
85 90 95
Pro Lys Glu Arg Ala Glu Ile Ser Met Leu Glu Gly Ala Val Leu Asp
100 105 110
Ile Arg Tyr Gly Val Ser Arg Ile Ala Tyr Ser Lys Asp Phe Glu Thr
115 120 125
Leu Lys Val Asp Phe Leu Ser Lys Leu Pro Glu Met Leu Lys Met Phe
130 135 140
Glu Asp Arg Leu Cys His Lys Thr Tyr Leu Asn Gly Asp His Val Thr
145 150 155 160
His Pro Asp Phe Met Leu Tyr Asp Ala Leu Asp Val Val Leu Tyr Met
165 170 175
Asp Pro Met Cys Leu Asp Ala Phe Pro Lys Leu Val Cys Phe Lys Lys
180 185 190
Arg Ile Glu Ala Ile Pro Gln Ile Asp Lys Tyr Leu Lys Ser Ser Lys
195 200 205
Tyr Ile Ala Trp Pro Leu Gln Gly Trp Gln Ala Thr Phe Gly Gly Gly
210 215 220
Asp His Pro Pro Lys Ser Asp Gly Ser Gly Ser Gly Ser Met Ala Ser
225 230 235 240
Leu Gln Gly Thr Glu Phe Ala Ala Trp Ala Glu Tyr Glu Ala Glu Lys
245 250 255
Lys Gly Leu Thr Met Arg Phe Asn Ile Pro Thr Gly Thr Asn Leu Pro
260 265 270
Pro Val Ser Phe Asn Ser Gln Thr Pro Tyr Ile Pro Phe Asn Leu Gly
275 280 285
Ala Leu Ser Ala Met Ser Asn Gln Gln Leu Glu Asp Leu Ile Asn Gln
290 295 300
Gly Arg Glu Lys Val Val Glu Ala Thr Asn Ser Val Thr Ala Val Arg
305 310 315 320
Ile Gln Pro Leu Glu Asp Ile Ile Ser Ala Val Trp Lys Glu Asn Met
325 330 335
Asn Leu Ser Glu Ala Gln Val Gln Ala Leu Ala Leu Ser Arg Gln Ala
340 345 350
Ser Gln Glu Leu Asp Val Lys Arg Arg Glu Ala Ile Tyr Asn Asp Val
355 360 365
Leu Thr Lys Gln Gln Met Leu Ile Ser Cys Val Gln Arg Ile Leu Met
370 375 380
Asn Arg Arg Leu Glu His His His His His His
385 390 395
<210> 2
<211> 336
<212> DNA
<213> Artificial sequence (Artificial)
<400> 2
gaggtgaagc tgcaggagtc aggacctagc ctggtgaagc ctggggcttc agtgaagatg 60
tcctgtaagg cttctggata cacattcact gactactaca tgaactgggt gaagcagagt 120
catggaaaga gccttgagtg gattggacgt gttaatccta acaatggtgg tactagctac 180
aaccagaagt tcaagggcaa ggccacattg acagtagaca aatccctcag cacagcctac 240
atgcagctca acagcctgac atctgaggac tctgcggtct attactgtgc aagagagact 300
tactggggcc aagggactct ggtcactgtc tctgca 336
<210> 3
<211> 336
<212> DNA
<213> Artificial sequence (Artificial)
<400> 3
gatatcatgc tgacccaatc tccactctct ttgtcggtta ccattggaca atcagcctcc 60
atctcttgca agtcaagtca gagtctctta gatagtgatg gaaagacata tttgaattgg 120
ttgttacaga ggccaggcca gtctccaaag cgcctaatct atctggtgtc taaactggac 180
tctggagtcc ctgacaggtt cactggcagt ggatcaggga cagatttcac actgaaaatc 240
aggagagtgg aggctgagga tttgggagtt tattattgct ggcaaggtac acattttccg 300
tggacgttcg gtggaggcac caagctggaa atcaaa 336
<210> 4
<211> 112
<212> PRT
<213> Artificial sequence (Artificial)
<400> 4
Glu Val Lys Leu Gln Glu Ser Gly Pro Ser Leu Val Lys Pro Gly Ala
1 5 10 15
Ser Val Lys Met Ser Cys Lys Ala Ser Gly Tyr Thr Phe Thr Asp Tyr
20 25 30
Tyr Met Asn Trp Val Lys Gln Ser His Gly Lys Ser Leu Glu Trp Ile
35 40 45
Gly Arg Val Asn Pro Asn Asn Gly Gly Thr Ser Tyr Asn Gln Lys Phe
50 55 60
Lys Gly Lys Ala Thr Leu Thr Val Asp Lys Ser Leu Ser Thr Ala Tyr
65 70 75 80
Met Gln Leu Asn Ser Leu Thr Ser Glu Asp Ser Ala Val Tyr Tyr Cys
85 90 95
Ala Arg Glu Thr Tyr Trp Gly Gln Gly Thr Leu Val Thr Val Ser Ala
100 105 110
<210> 5
<211> 112
<212> PRT
<213> Artificial sequence (Artificial)
<400> 5
Asp Ile Met Leu Thr Gln Ser Pro Leu Ser Leu Ser Val Thr Ile Gly
1 5 10 15
Gln Ser Ala Ser Ile Ser Cys Lys Ser Ser Gln Ser Leu Leu Asp Ser
20 25 30
Asp Gly Lys Thr Tyr Leu Asn Trp Leu Leu Gln Arg Pro Gly Gln Ser
35 40 45
Pro Lys Arg Leu Ile Tyr Leu Val Ser Lys Leu Asp Ser Gly Val Pro
50 55 60
Asp Arg Phe Thr Gly Ser Gly Ser Gly Thr Asp Phe Thr Leu Lys Ile
65 70 75 80
Arg Arg Val Glu Ala Glu Asp Leu Gly Val Tyr Tyr Cys Trp Gln Gly
85 90 95
Thr His Phe Pro Trp Thr Phe Gly Gly Gly Thr Lys Leu Glu Ile Lys
100 105 110

Claims (10)

1. An anti-ATRX monoclonal antibody is produced by hybridoma cell strain with preservation number of CGMCC NO 20772.
2. The monoclonal antibody of claim 1, wherein the monoclonal antibody specifically recognizes ATRX protein.
3. The monoclonal antibody of claim 1, wherein the DNA sequence encoding the heavy chain variable region of the monoclonal antibody is the nucleotide sequence shown in SEQ ID2, and the DNA sequence encoding the light chain variable region of the monoclonal antibody is the nucleotide sequence shown in SEQ ID 3.
4. The monoclonal antibody according to claim 1, wherein the amino acid sequence of the heavy chain variable region of the monoclonal antibody is the amino acid sequence shown in SEQ ID 4; the amino acid sequence of the monoclonal antibody light chain variable region is the amino acid sequence shown as SEQ ID 5.
5. The monoclonal antibody of claim 1, wherein the monoclonal antibody is a mouse IgG2aSubtype monoclonal antibodies.
6. The preparation method of the anti-ATRX protein monoclonal antibody is characterized in that an antigen used for immunizing a mouse is recombinant protein, the recombinant protein is expressed by escherichia coli in a recombinant mode, and comprises a GST protein tag, an ATRX protein fragment and a histidine protein tag, and the amino acid sequence of the recombinant protein is the amino acid sequence shown in SEQ ID No. 1.
7. The method according to claim 6, wherein the ATRX protein fragment is the amino acid fragment from 2273 to 2413 positions of the ATRX protein.
8. A hybridoma cell strain capable of secreting ATRX-resistant protein molecules is a mouse hybridoma cell strain 20A2, and is preserved in China general microbiological culture Collection center with the preservation number: CGMCC NO 20772.
9. Use of the monoclonal antibody of any one of claims 1-6 in an immunoassay for ATRX protein.
10. Use according to claim 9, wherein said immunodetection comprises immunohistochemistry, immunoblotting and enzyme-linked immunosorbent assay.
CN202110383273.9A 2021-04-09 2021-04-09 Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof Active CN112940133B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN202110383273.9A CN112940133B (en) 2021-04-09 2021-04-09 Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN202110383273.9A CN112940133B (en) 2021-04-09 2021-04-09 Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof

Publications (2)

Publication Number Publication Date
CN112940133A true CN112940133A (en) 2021-06-11
CN112940133B CN112940133B (en) 2022-04-22

Family

ID=76231507

Family Applications (1)

Application Number Title Priority Date Filing Date
CN202110383273.9A Active CN112940133B (en) 2021-04-09 2021-04-09 Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof

Country Status (1)

Country Link
CN (1) CN112940133B (en)

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113735971A (en) * 2021-09-27 2021-12-03 福州迈新生物技术开发有限公司 anti-CK 18 protein monoclonal antibody, cell strain thereof, preparation method and application
CN113831410A (en) * 2021-08-12 2021-12-24 福州迈新生物技术开发有限公司 anti-CD 56 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113845592A (en) * 2021-09-27 2021-12-28 福州迈新生物技术开发有限公司 anti-CK 5/6 protein monoclonal antibody, cell strain thereof, preparation method and application

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20040141977A1 (en) * 2002-10-31 2004-07-22 Paz Einat ATRX and uses thereof
WO2012094401A2 (en) * 2011-01-04 2012-07-12 The Johns Hopkins University Genes frequently altered in pancreatic neuroendocrine tumors
CN103585618A (en) * 2013-10-31 2014-02-19 中山大学 Application of death-domain associated protein (DAXX) in preparation of tumor cell regulation agent
CN105606818A (en) * 2016-01-15 2016-05-25 江涛 IDH1-R132H and ATRX expression based glioma prognostic system
CN105675868A (en) * 2016-01-15 2016-06-15 江涛 Glioma typing system based on IDH1-R132H and ATRX expression

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20040141977A1 (en) * 2002-10-31 2004-07-22 Paz Einat ATRX and uses thereof
WO2012094401A2 (en) * 2011-01-04 2012-07-12 The Johns Hopkins University Genes frequently altered in pancreatic neuroendocrine tumors
CN103585618A (en) * 2013-10-31 2014-02-19 中山大学 Application of death-domain associated protein (DAXX) in preparation of tumor cell regulation agent
CN105606818A (en) * 2016-01-15 2016-05-25 江涛 IDH1-R132H and ATRX expression based glioma prognostic system
CN105675868A (en) * 2016-01-15 2016-06-15 江涛 Glioma typing system based on IDH1-R132H and ATRX expression

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
SATOSHI OGASAWARA等: ""Establishment of Anti-Human ATRX Monoclonal Antibody AMab-6"", 《MONOCLONAL ANTIBODIES IN IMMUNODIAGNOSIS AND IMMUNOTHERAPY》 *
唐双阳等: ""抗ATRX-C2193-2492多克隆抗体的制备和鉴定"", 《细胞与分子免疫学杂志》 *

Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN113831410A (en) * 2021-08-12 2021-12-24 福州迈新生物技术开发有限公司 anti-CD 56 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113831410B (en) * 2021-08-12 2023-03-07 福州迈新生物技术开发有限公司 anti-CD 56 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113735971A (en) * 2021-09-27 2021-12-03 福州迈新生物技术开发有限公司 anti-CK 18 protein monoclonal antibody, cell strain thereof, preparation method and application
CN113845592A (en) * 2021-09-27 2021-12-28 福州迈新生物技术开发有限公司 anti-CK 5/6 protein monoclonal antibody, cell strain thereof, preparation method and application
CN113845592B (en) * 2021-09-27 2023-03-10 福州迈新生物技术开发有限公司 anti-CK 5/6 protein monoclonal antibody, cell strain thereof, preparation method and application

Also Published As

Publication number Publication date
CN112940133B (en) 2022-04-22

Similar Documents

Publication Publication Date Title
CN112940133B (en) Monoclonal antibody of anti-ATRX protein, cell strain, preparation method and application thereof
CN113045667B (en) anti-IDO 1 protein monoclonal antibody and cell strain, preparation method and application thereof
CN112940118B (en) Monoclonal antibody of anti-CK 8 protein, cell strain, preparation method and application thereof
CN113234155B (en) anti-Calponin protein monoclonal antibody, cell strain thereof, preparation method and application
CN113061184B (en) anti-CK 7 protein monoclonal antibody, cell strain thereof, preparation method and application
CN113265003B (en) anti-TdT protein monoclonal antibody, cell strain thereof, preparation method and application
CN111363043B (en) anti-CD 20 protein monoclonal antibody, cell line, preparation method and application thereof
CN113045652B (en) anti-DOG 1 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113234161B (en) anti-CD 3 protein monoclonal antibody and cell strain, preparation method and application thereof
CN108467432B (en) Monoclonal antibody of anti-E-cadherin protein, cell strain, preparation method and application thereof
CN113061186B (en) Monoclonal antibody of anti CA125 protein, cell strain, preparation method and application thereof
CN113278070B (en) anti-CK 17 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113072642B (en) anti-OCT 3/4 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113105547B (en) anti-CD 5 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113087793B (en) anti-CK 14 protein monoclonal antibody, cell strain thereof, preparation method and application
CN113087794B (en) Monoclonal antibody for resisting HNF1 beta protein, cell strain, preparation method and application thereof
CN113583120B (en) Monoclonal antibody against CK20 protein, cell strain, preparation method and application thereof
CN113831410B (en) anti-CD 56 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113845592B (en) anti-CK 5/6 protein monoclonal antibody, cell strain thereof, preparation method and application
CN113234158B (en) anti-TIM 3 protein monoclonal antibody, cell strain thereof, preparation method and application
CN112940125B (en) anti-VISTA protein monoclonal antibody, cell strain thereof, preparation method and application
CN113735971B (en) anti-CK 18 protein monoclonal antibody and cell strain, preparation method and application thereof
CN113307875B (en) Monoclonal antibody for resisting TCR beta F1 protein, cell strain, preparation method and application thereof
CN113265000B (en) Monoclonal antibody for resisting CDX2 protein, cell strain, preparation method and application thereof
CN115850468A (en) Monoclonal antibody of anti-TBX 19 protein, cell strain, preparation method and application thereof

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant