CN112779170A - Recombinant aspergillus niger genetically engineered bacterium and construction method and application thereof - Google Patents
Recombinant aspergillus niger genetically engineered bacterium and construction method and application thereof Download PDFInfo
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- CN112779170A CN112779170A CN202110095568.6A CN202110095568A CN112779170A CN 112779170 A CN112779170 A CN 112779170A CN 202110095568 A CN202110095568 A CN 202110095568A CN 112779170 A CN112779170 A CN 112779170A
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- aspergillus niger
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- C07K14/37—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi
- C07K14/38—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from fungi from Aspergillus
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/87—Introduction of foreign genetic material using processes not otherwise provided for, e.g. co-transformation
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
- C12P7/00—Preparation of oxygen-containing organic compounds
- C12P7/40—Preparation of oxygen-containing organic compounds containing a carboxyl group including Peroxycarboxylic acids
- C12P7/44—Polycarboxylic acids
- C12P7/48—Tricarboxylic acids, e.g. citric acid
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Abstract
The invention discloses a recombinant Aspergillus niger genetically engineered bacterium, a construction method and application thereof, wherein iron acquisition regulatory gene in the recombinant Aspergillus niger genetically engineered bacterium is inactivated. The genetic engineering bacteria reduce the amount of biomembrane in the process of producing citric acid by aspergillus niger through immobilized fermentation, effectively relieve the phenomenon that the pore diameter of a carrier is blocked, and increase the oxygen and mass transfer effects between the carrier and the outside, thereby exerting the advantages of immobilized fermentation, improving the yield and sugar-acid conversion rate of citric acid, shortening the fermentation period, and effectively solving the problems of low yield and long fermentation period in the prior industrial production of citric acid by aspergillus niger through fermentation; and the obtained recombinant Aspergillus niger genetically engineered bacteria can be fermented continuously in 12 batches, and the fermentation intensity is not obviously reduced.
Description
Technical Field
The invention belongs to the technical field of genetic engineering, and particularly relates to a recombinant aspergillus niger genetically engineered bacterium, a construction method and application thereof.
Background
Because of its wide use, citric acid plays an important role in the industries of medicine, food, agriculture, etc., and a large amount of citric acid is consumed every year. In the market for organic acids, citric acid has a market share as high as 70%. In the food industry, citric acid is commonly used for producing various beverages, candies, biscuits and other foods, can also be used as a flavoring agent or an antioxidant, and citrate also plays an important role in the food industry; in the pharmaceutical industry, citrate can help the quick dissolution of active ingredients in medicines or be used as an anticoagulant; in the chemical industry, citric acid is used in large quantities as complexing agents, masking agents, builders, etc.; citric acid is also widely used in textile industry, animal husbandry, environmental protection, and the like. At present, in the industrial production of citric acid, aspergillus niger is used for biological fermentation, which is one of the most main ways, and the main raw material of the citric acid is grain crops such as corn and the like. However, the current food storage in China cannot meet the national demand, the food price generally rises, and the production cost of citric acid also rises, so that the improvement of a citric acid fermentation method is needed to reduce the fermentation cost.
The cell immobilization fermentation technology developed based on the immobilized enzyme technology can continuously carry out fermentation, shorten the production period, improve the yield, greatly improve the fermentation efficiency of the citric acid and reduce the cost. At present, the cell immobilization method mainly comprises four methods: entrapment, cross-linking, covalent bonding, and adsorption. The adsorption method is based on the interaction force between the cell surface and the carrier surface, mainly hydrophobic force and electrostatic force to promote the adsorption of cells on the carrier surface. For filamentous fungi, the adsorption method is simple to operate, only has physical action and no chemical change in the fixing process, can be theoretically used for cell fixing of all filamentous fungi, and is favorable for industrial large-scale application.
Disclosure of Invention
The purpose of the invention is as follows: the technical problem to be solved by the invention is to provide a recombinant aspergillus niger genetically engineered bacterium aiming at the defects of the prior art.
The invention also provides a construction method of the recombinant Aspergillus niger genetically engineered bacterium.
The invention further provides application of the recombinant Aspergillus niger genetically engineered bacterium.
The invention idea is as follows: according to the invention, a double exchange method is adopted, and a hygromycin resistance gene (hyg resistance gene) is used for replacing a partial sequence of an iron acquisition regulatory gene (AcuM gene) in the Aspergillus niger genetically engineered bacteria, so that the recombinant Aspergillus niger genetically engineered bacteria is obtained. Wherein, the AcuM gene can inhibit SreaA gene in Aspergillus niger and induce HapX gene expression, thereby stimulating reduced iron assimilation and promoting iron absorption mediated by a siderophore. After the AcuM gene is knocked out, the reduction of intracellular iron ion level inhibits the formation of hydrophobin, the hydrophobic acting force is weakened, the hydrophobicity of the surface of spores is obviously weakened, the formation of biofilm is reduced, and the effects of immobilized fermentation and citric acid production are influenced.
In order to solve the first technical problem, the invention discloses a recombinant aspergillus niger genetically engineered bacterium, wherein AcuM gene in the recombinant aspergillus niger genetically engineered bacterium is inactivated.
Wherein the Aspergillus Niger genetically engineered bacterium is Aspergillus Niger ATCC 12846.
Wherein, the nucleotide sequence of the inactivated AcuM gene is shown in SEQ ID NO. 1.
Wherein, the inactivated nucleotide sequence of the AcuM gene is shown in SEQ ID NO. 2.
In order to solve the second technical problem, the invention discloses a method for constructing the recombinant aspergillus niger genetically engineered bacterium, which comprises the following steps:
(1) amplifying to obtain an upstream homology arm and a downstream homology arm of an AcuM gene by taking the genome DNA of the Aspergillus niger genetic engineering bacteria as a template;
(2) amplifying to obtain a hygromycin resistance gene by taking a plasmid PAN7-1 as a template;
(3) taking the upstream homology arm and the downstream homology arm of the AcuM gene obtained in the step (1) and the hygromycin resistance gene obtained in the step (2) as templates, and performing overlap extension PCR amplification to obtain a gene knockout fragment;
(4) and (4) introducing the gene knockout fragment obtained in the step (3) into an Aspergillus niger protoplast for homologous recombination to obtain AcuM inactivated recombinant Aspergillus niger genetically engineered bacterium.
In the step (1), the Aspergillus genetic engineering bacteria are preferably Aspergillus Niger ATCC 12846.
In the step (1), the upstream homology arm of the AcuM gene is obtained by amplifying primers with nucleotide sequences shown as SEQ ID NO.3 and SEQ ID NO. 4.
In the step (1), the nucleotide sequence of the upstream homology arm of the AcuM gene is shown as SEQ ID NO. 11.
In the step (1), the downstream homology arm of the AcuM gene is obtained by amplifying primers with nucleotide sequences shown as SEQ ID NO.5 and SEQ ID NO. 6.
In the step (1), the nucleotide sequence of the downstream homology arm of the AcuM gene is shown as SEQ ID NO. 12.
In the step (2), the hygromycin resistance gene is obtained by amplifying primers with nucleotide sequences shown as SEQ ID NO.7 and SEQ ID NO. 8.
In the step (2), the nucleotide sequence of the hygromycin resistance gene is shown as SEQ ID NO. 13.
In the step (3), the gene knockout fragment is obtained by amplifying primers with nucleotide sequences shown as SEQ ID NO.9 and SEQ ID NO. 10.
In the step (3), the nucleotide sequence of the gene knockout fragment is shown as SEQ ID NO. 14.
In order to solve the third technical problem, the invention discloses application of the recombinant aspergillus niger genetically engineered bacterium in fermentation preparation of citric acid.
Preferably, the fermentation is immobilized fermentation, namely the recombinant aspergillus niger genetically engineered bacteria are used as fermentation strains to prepare the citric acid through immobilized fermentation, the hydrophobicity of the recombinant aspergillus niger genetically engineered bacteria is reduced and the yield of a biological membrane is reduced in the process of producing the citric acid through immobilized fermentation, the carrier agglomeration phenomenon is reduced, the problem of low oxygen and mass transfer efficiency caused by carrier agglomeration is solved, the citric acid production efficiency is improved, the continuous fermentation performance of the strains is enhanced, and the method is suitable for industrial production.
Specifically, a recombinant Aspergillus niger genetically engineered bacterium plate is scraped by a spore scraping liquid to prepare a spore liquid, and then the spore liquid is inoculated into a fermentation culture medium containing an immobilized carrier to prepare the citric acid through fermentation.
Wherein the spore liquid is inoculated in the fermentation culture medium in a volume ratio of 0.1-1%, and preferably 0.4%.
Wherein the immobilization medium for immobilization fermentation is polyurethane.
Wherein the content of the immobilization medium is 0.1-5g/L of fermentation medium, preferably 2g/L of fermentation medium.
Preferably, the immobilization medium of the immobilization fermentation is pretreated sequentially with NaOH and HCl.
Further preferably, the immobilization medium is soaked in NaOH, washed, soaked in HCl, washed and dried to obtain the product.
Wherein the concentration of the NaOH water is 0.5-2M, and preferably 1M.
Wherein the soaking time in NaOH is 30min-2h, preferably 1 h.
Among them, the washing is preferably performed to be neutral.
Wherein the HCl concentration is 0.5-2M, preferably 1M; the solvent is water.
Wherein, the time for soaking in HCl is 30min-2h, preferably 1 h.
Wherein the immobilized medium is cubic, and preferably has a volume of 0.5cm3A cube of (a).
Wherein the fermentation medium is prepared by enzymolysis of corn flour with liquefying enzyme, or prepared from bran leachate.
The preparation method of the fermentation medium obtained by carrying out enzymolysis on the corn flour by using the liquefying enzyme comprises the following steps:
(i) adding liquefying enzyme into the corn flour solution, and preserving heat to obtain a corn flour solution;
(ii) adding liquefying enzyme into the corn flour liquid obtained in the step (i), performing enzymolysis, and filtering to obtain corn flour clear liquid;
(iii) and (3) mixing the corn flour liquid before filtration in the step (ii) with the corn flour clear liquid obtained in the step (ii).
In the step (i), the concentration of the corn flour solution is 200-300 g/L.
In step (i), the solvent of the corn flour solution is water.
In the steps (i) and (ii), the liquefying enzyme contains alpha-amylase, and the enzyme activity of the alpha-amylase is 70000-80000U/mL (1mL of liquefying enzyme is 1 enzyme activity unit, U/mL, which is the enzyme amount required by 1min hydrolysis of 1mg of soluble starch under the conditions of pH5.5 and 85 ℃).
In the step (i), the dosage of the liquefying enzyme is 0.5-1mL/L of corn flour solution.
In step (i), the temperature of the heat preservation is 60-75 ℃.
In the step (i), the heat preservation time is 35-45 min.
In the step (ii), the corn flour liquid is heated to 85-105 ℃, and then the liquefying enzyme is added.
In the step (ii), the dosage of the liquefying enzyme is 0.5-1mL/L of the corn flour liquid.
In the step (ii), the enzymolysis time is enzymolysis until the iodine solution does not turn blue, and is preferably 45-60 min.
In the step (iii), the volume ratio of the corn flour liquid to the corn flour clear liquid is 2-10: 100.
wherein the concentration of each component in the fermentation medium prepared by the bran leachate is as follows: glucose 250g/L, NaNO3 4.2g/L、KH2PO4 1.0g/L、MgSO4·7H2O0.5 g/L, and the solvent is bran extract.
The preparation method of the bran leachate comprises the steps of boiling and filtering bran, preferably, boiling a bran water solution for 1 hour, filtering to obtain a filtrate, and fixing the volume with water.
Wherein the fermentation temperature is 30-37 ℃.
Wherein the rotation speed of the fermentation is 200-330 rpm.
Wherein the fermentation time is 72-115 h.
Has the advantages that: compared with the prior art, the invention has the following advantages:
the invention provides an AcuM gene inactivated recombinant Aspergillus niger genetically engineered bacterium, which reduces the amount of a biological membrane of Aspergillus niger in the process of producing citric acid by immobilized fermentation, effectively relieves the phenomenon that the pore diameter of a carrier is blocked, and increases the oxygen and mass transfer effects of the carrier and the outside, thereby exerting the advantages of immobilized fermentation, improving the yield and the sugar-acid conversion rate of citric acid, shortening the fermentation period, and effectively solving the problems of low yield and long fermentation period in the prior industrial production of citric acid by Aspergillus niger fermentation; and the obtained recombinant Aspergillus niger genetically engineered bacteria can be fermented continuously in 12 batches, and the fermentation intensity is not obviously reduced.
Drawings
The foregoing and/or other advantages of the invention will become further apparent from the following detailed description of the invention when taken in conjunction with the accompanying drawings.
FIG. 1 is an electrophoretogram of the genome of Aspergillus Niger ATCC 12846.
FIG. 2 is a PAN7-1 plasmid map.
FIG. 3 shows PCR electrophoresis of upstream and downstream homology arms of AcuM gene, wherein M is DNAmarker of DL 5000, lane 1 is the upper homology arm of AcuM gene, lane 2 is hyg resistance expression element, and lane 3 is the lower homology arm of AcuM gene.
FIG. 4 shows an electrophoretogram of a knockout fragment, where M is marker lane and lane 1 is the knockout fragment.
FIG. 5 is a graph showing crystal violet staining, wherein A is original bacteria and B is a.DELTA.AcuM strain.
FIG. 6 is a graph showing differences in OD values of crystal violet stains.
FIG. 7 shows the results of fermentation of original A.niger and A.niger genetically engineered bacteria.
FIG. 8 is an electron micrograph of biofilm from pristine A.niger.
FIG. 9 is the electron microscope image of the biological membrane of the recombinant Aspergillus niger genetically engineered bacterium (delta AcuM strain).
Fig. 10 is a graph of the difference in production intensity of the Δ AcuM strain and the original strain after 12 batches of continuous fermentation.
Detailed Description
The experimental methods described in the following examples are all conventional methods unless otherwise specified; the reagents and materials are commercially available, unless otherwise specified.
Example 1: construction of Aspergillus niger iron acquisition regulatory gene AcuM knock-out bacterium
Extraction of original Aspergillus niger genome
A kit for extracting a plant genome (takara minitest plant genomic DNA extraction kit) by takara was used, and the specific method was as follows:
1. inoculating 1mL of scraped Aspergillus Niger ATCC12846 spore liquid into 50mL of DP culture medium, and culturing at 35 ℃ at 200r/min for 24 h; the DP medium formulation is as follows: 10g/L dextrin, 5g/L peptone, 2.5g/L potassium dihydrogen phosphate, 1g/L sodium nitrate, 0.5g/L magnesium sulfate and 10g/L glycine, and the volume is determined to be 50mL after water is added to 100 mL.
2. Centrifuging at 8000r/min for 5min, collecting mycelium pellet, washing with normal saline twice, grinding the collected mycelium pellet with liquid nitrogen for 3 times, weighing 100mg of ground powder, adding into tube containing 500 μ L Buffer HS II, mixing, adding 10 μ L RNase A, shaking thoroughly, mixing, and water-bathing at 56 deg.C for 10 min.
3. Add 62.5. mu.L Buffer KAC to step 2 and mix well. The mixture was kept on ice for 5min and centrifuged at 12000rpm for 5 min. The supernatant was collected at 600. mu.L, added to 600. mu.L of Buffer GB, and mixed well.
4. The Spin Column was mounted on a Collection Tube, the solution was transferred to the Spin Column, centrifuged at 12000rpm for 1min, and the filtrate was discarded.
5. mu.L of Buffer WA WAs added to Spin Column, centrifuged at 12000rpm for 1min, and the filtrate WAs discarded.
6. mu.L of Buffer WB was added to Spin Column, centrifuged at 12000rpm for 1min, and the filtrate was discarded.
7. Repeat step 6 once.
8. Spin columns were mounted on a Collection Tube and centrifuged at 12000rpm for 2 min.
9. Spin Column was placed in a new 1.5mL centrifuge tube, 40. mu.L of sterilized 65 ℃ water was added to the center of the Spin Column membrane, and the mixture was allowed to stand at room temperature for 1 min. The DNA was eluted by centrifugation at 12000rpm for 2 min. The concentration of the Aspergillus niger genome was determined by agarose gel electrophoresis as shown in FIG. 1, where M is DNA marker of DL15000 and No.1 is the extracted Aspergillus niger genome.
(II) amplifying upstream and downstream homologous arms of gene AcuM by using PCR technology
Amplifying an upstream homology arm by using the original Aspergillus niger genome extracted in the step (one) as a template and using AcuM-up-F and AcuM-up-R as an upstream primer and a downstream primer, wherein the nucleotide sequences of the upstream homology arm and the downstream homology arm are respectively shown as SEQ ID No.3 and SEQ ID No. 4; AcuM-down-F and AcuM-down-R are used as an upstream primer and a downstream primer to amplify downstream homologous arms, and the nucleotide sequences are respectively shown as SEQ ID NO.5 and SEQ ID NO. 6.
The amplification reaction system is shown in Table 1, and the PCR reaction conditions are as follows: (1) denaturation at 95 ℃ for 10 s; (2) annealing at 55 ℃ for 30 s; (3) extending for 5min at 72 ℃; repeating the steps (1) to (3) for 35 times.
TABLE 1 PCR reaction System and reaction conditions
After the reaction, the PCR product was quantified by agarose gel electrophoresis, as shown in FIG. 3, lane 1 is the upper homologous arm of the AcuM gene, lane 3 is the lower homologous arm of the AcuM gene, the nucleotide sequence of the upstream homologous arm of the AcuM gene is shown in SEQ ID NO.11, and the nucleotide sequence of the downstream homologous arm of the AcuM gene is shown in SEQ ID NO. 12.
(III) amplification of hyg-resistant expression elements
PAN7-1 plasmid (stored in a laboratory, PAN7-1 plasmid map is shown in figure 2, and nucleotide sequence is shown in SEQ ID NO.17) is used as a template, AcuM-hyg-F and AcuM-hyg-R are used as an upstream primer and a downstream primer to amplify hyg resistance expression elements, and the nucleotide sequences are respectively shown in SEQ ID NO.7 and SEQ ID NO. 8.
The reaction system is shown in Table 1, and the PCR reaction conditions are as follows: (1) denaturation at 5 ℃ for 10 s; (2) annealing at 55 ℃ for 30 s; (3) extending for 5min at 72 ℃; repeating the steps (1) to (3) for 35 times.
After the reaction, the PCR product was quantified by agarose gel electrophoresis, as shown in FIG. 3, lane 2 shows the hyg expression element, the nucleotide sequence of which is shown in SEQ ID NO. 13.
(IV) amplification of knockout fragment
AcuM upstream homology arm, downstream homology arm and hyg resistance expression element are used as templates, AcuM-F, AcuM-R is used as an upstream primer and a downstream primer, respectively, overlapping extension PCR (overlap PCR) technology is used for amplifying AcuM gene knockout fragments, and the nucleotide sequences are respectively shown as SEQ ID No.9 and SEQ ID No. 10.
The reaction system is shown in Table 1, and the PCR reaction conditions are as follows: (1) denaturation at 95 ℃ for 10 s; (2) annealing at 55 ℃ for 30 s; (3) extending at 72 ℃ for 5min, and repeating the steps (1) to (3) 35 times.
After the reaction, the PCR product was quantified by agarose gel electrophoresis, as shown in FIG. 4, lane 1 is a knockout fragment, and the nucleotide sequence of the knockout fragment is shown in SEQ ID NO. 14.
(V) preparation and transformation of Aspergillus niger protoplast
1. Aspergillus Niger ATCC12846 was inoculated into PDA plates and filled with spores, 3mL of the sporulation buffer was added to the plates, the spores were scraped off with a spreading bar and transferred to a sterilized 5mL centrifuge tube.
Of the PDA panelThe formula of the culture medium is as follows: weighing 200g peeled potato, and cutting into 1cm3Adding water 600mL into small pieces, boiling, maintaining for 30min, filtering with 4 layers of gauze to obtain potato juice, metering to 1L with measuring cylinder, and packaging. Then 20g/L glucose and 15g/L agar powder are added, and the mixture is sterilized for 20min at 115 ℃.
2. And (3) taking 0.5mL of the spore liquid obtained in the step (1), inoculating the spore liquid into 50mL of DP culture medium, culturing at 35 ℃ and 200rpm for 13-16h, and observing the germination state of the spores by microscopic examination.
3. After the spores were germinated, they were filtered through Miracloth (Miracloth) to leave hyphae.
Enzymatic hydrolysates (0.1 g/10mL each of lyase Lysing enzyme, crashease, snailase, cellulase 400. mu.L/10 mL) were prepared and sterilized by filtration using sterile syringe filters.
TABLE 2 manufacturer model of the enzymes used
Name (R) | Manufacturer of the product | Model number |
Lyase enzymes | Aladdin | L1412 |
Crash enzymes | Aladdin | D9515 |
Snail enzyme | Shanghai worker | A600870 |
Cellulase enzymes | Sigma | C2730 |
4. Adding 2g of the mycelium obtained in the step 3 into 20mL of the enzymolysis liquid obtained in the step 3, and carrying out enzymolysis at 30 ℃ and 220rpm for 30 min; then the rotating speed is reduced to 150rpm for enzymolysis for 3 h.
5. After the enzymolysis is finished, filtering with filter paper, taking the filtrate, and centrifuging at 5000rpm for 10min at 4 ℃. Removing supernatant, adding 1mL of 1M sorbitol aqueous solution (ice water bath), uniformly mixing by blowing and sucking with a gun, adding 15mL of 1M sorbitol aqueous solution, centrifuging, and removing supernatant. And then repeated once more. The supernatant was removed, 1mL Solution5 was added, and the mixture was mixed by gun-suction to obtain protoplasts. Wherein, the Solution5 is self-made, and the formula is as follows: KCl 4.47g, CaCl20.735g, MOP 0.2093g, adjusted to pH 6.0 with KOH and made up to 100mL with water.
6. And (3) sucking 100 mu L of protoplast into a 1.5mL sterile centrifuge tube, and adding 10 mu L of the gene knockout fragment constructed in the step (IV) to the protoplast and mixing the fragment and the protoplast. Then adding 50 mu L of Solution4, mixing uniformly, placing on ice and timing for 15-30 min. Wherein, the Solution4 is self-made, and the formula is as follows: PEG 800025 g, CaCl21.47g, KCl 4.47g, 10mM Tris, pH 7.5 adjusted with hydrochloric acid and made up to 100mL with water.
7. After 20min, 900 μ L of Solution4 was added, the mixture was inverted several times and mixed, and the mixture was left at room temperature for 15-30 min. And (3) after 15-30min, centrifuging at 6000rpm for 5min, discarding 900 mu L of supernatant, coating the residual thallus in a PDA culture medium with sucrose concentration of 1mol/L and hygromycin concentration of 150mmol/L, and performing upright culture to obtain a transformant.
8. Transformants were picked for colony PCR validation. The specific method comprises the following steps: an appropriate amount of transformant was added to 50. mu.L of colony PCR buffer (100mmol/L Tris-HCl, 10mmol/L EDTA, 1mol/L KCl), water-bathed at 95 ℃ for 10min, and 0.5. mu.L of transformant was added to the PCR reaction system. PCR primers are hyg-F and hyg-R (the nucleotide sequence of hyg-F is shown as SEQ ID NO.15, and the nucleotide sequence of hyg-R is shown as SEQ ID NO. 16), agarose electrophoresis shows an amplification band, which shows that the transformation is successful, and the recombinant Aspergillus niger genetically engineered bacteria are obtained: a. AcuM strain.
Example 2: crystal violet staining test
Respectively inoculating original Aspergillus Niger ATCC12846 (original bacteria) and recombinant Aspergillus Niger genetically engineered bacteria (delta AcuM strain) to a PDA (personal digital assistant) plate, adding 3mL of a sporulation buffer solution into the plate when spores grow, scraping the spores by using a coating rod, transferring the spores into a sterilized 5mL centrifugal tube, and performing constant volume to 2mL by using the sporulation buffer solution to obtain a spore solution. Quantitated and diluted to 10 using a hemocytometer5one/mL, followed by further dilution to 104/mL,103/mL。
1mL of synthetic medium was added to a 24-well plate in advance, and then 2. mu.L of spore liquid at different concentrations was inoculated into the medium. Standing and culturing at 35 ℃ for 36h to enable Aspergillus niger to form a film at the bottom of the pore plate. The medium was then decanted, washed 2 times with PBS, and stained with 0.1% crystal violet for 15 min. Then pouring out the crystal violet, washing with PBS for 2 times, adding glacial acetic acid, and placing in a shaking instrument for 30min to decolorize the crystal violet. Then, observation and detection of OD570 by microplate reader were carried out. FIG. 5 and FIG. 6 show the difference between the crystal violet staining pattern and the OD value.
The formula of the synthetic culture medium is as follows: 6g/L of sodium nitrate, 0.52g/L of potassium chloride, 0.52g/L of magnesium sulfate, 1.52g/L of monopotassium phosphate, 10g/L of glucose and 0.4mg/L of biotin.
TABLE 3 OD values of biofilm crystal violet staining experiments at different spore concentrations
The results in FIGS. 5 and 6 show that the.DELTA.AcuM strain, after destaining, is markedly lighter in purple than the original strain, at 103The color of the delta AcuM strain at the concentration is completely removed, and the data result is consistent with the color according to the OD value detected by an enzyme-labeling instrument. Indicating that the biofilm is reduced after inactivation of the iron acquisition regulatory gene Δ AcuM.
Example 3: immobilized fermentation experiment of genetically engineered bacteria
1. Preparation of porous fiber material immobilized medium
Soaking polyurethane material in 1M NaOH water solution for 1 hr, cleaning with pure water, soaking in 1M HCl water solution for 1 hr, washing with pure water until pH is neutral, oven drying at 65 deg.C to constant weight, and cutting into pieces of 0.5cm3The vectors with the same size are arranged on the left and the right.
2. Preparation of immobilized fermentation Medium
(i) Weighing 250g/L corn flour, placing in a 75 ℃ water bath, adding 1mL of liquefying enzyme (60000U/L) when the corn flour liquid reaches 65 ℃, and preserving the temperature for 40min to obtain the corn flour liquid;
(ii) heating the water bath to 95 ℃, adding 1mL of liquefying enzyme when the corn flour liquid reaches 85 ℃, performing enzymolysis for 60min until the iodine solution does not turn blue, and filtering to obtain a clear corn flour liquid;
(iii) adding the unfiltered corn flour liquid in the step (ii) as a feed back (the volume ratio of the unfiltered corn flour liquid to the corn flour clear liquid is 8 percent) into the corn flour clear liquid obtained in the step (ii), mixing uniformly, and subpackaging every 100mL into 500mL conical flasks containing 2g/L of carrier. Sterilizing and cooling for later use.
3. Fermentation of
(1) Inoculating frozen recombinant Aspergillus Niger genetically engineered bacteria (delta AcuM strain) and original Aspergillus Niger ATCC12846 (original bacteria) spores onto a PDA plate, culturing at 35 ℃ in a constant temperature incubator for 4-5 days, and allowing the spores to grow thereon.
(2) Scraping spores with a spore scraping buffer solution to obtain a spore suspension, taking a proper amount of the spore suspension, transferring the spore suspension into a 500mL conical flask filled with 100mL immobilized fermentation medium, culturing for 96h in a shaking table at 35 ℃ and 250rpm, sampling every 12h in the fermentation process, centrifuging for 5min at 12000rpm, separating the supernatant from the precipitate, and measuring the residual sugar concentration and the citric acid yield in the supernatant. When the concentration of residual sugar is lower than 5g/L, the fermentation is finished. Wherein, the citric acid is measured by NaOH titration method, and the total sugar is measured by DNS method.
The NaOH titration method comprises the following steps: 1mL of sample (diluted to a certain concentration) is added into a 250mL conical flask, 50mL of pure water is added at the same time, 0.1429M NaOH is used for titration, and the consumed amount of NaOH is the yield of the citric acid.
The DNS method comprises the following steps: and (3) DNS preparation: weighing 10g of 3, 5-dinitrosalicylic acid, placing the 3, 5-dinitrosalicylic acid in about 600mL of water, gradually adding 10g of sodium hydroxide, magnetically stirring the mixture in a water bath at 50 ℃ to dissolve the sodium hydroxide, then sequentially adding 200g of sodium methyl tartrate, 2g of phenol and 5g of anhydrous sodium sulfite, cooling the mixture to room temperature after the sodium methyl tartrate, the phenol and the anhydrous sodium sulfite are completely dissolved and clarified, and fixing the volume to 1000mL by using pure water. Stored in a brown reagent bottle and used after being placed in the dark for 7 days.
The preparation method of the standard yeast comprises the following steps: preparing a series of sugar standard solutions with the concentration of 0.0-1.0g/L, respectively adding 0.5mL into 15mL centrifuge tubes for each concentration, then adding 0.5mL DNS solution into each centrifuge tube,
placing the centrifuge tubes in a boiling water bath for reaction for 5min, placing the centrifuge tubes in ice water for cooling, then adding 8mL of pure water into each centrifuge tube, uniformly mixing, measuring the light absorption value OD540 under the wavelength of 540nm, and taking 0.0g/L as a control. The concentration of the standard solution is plotted on the ordinate, and the absorbance OD540 is plotted on the abscissa to prepare a standard curve.
The sample measuring method comprises the following steps: after the sample is diluted properly, 1mL of concentrated sulfuric acid is added into 10mL of the sample, the mixture is placed into ice water for cooling after 15min of reaction in a boiling water bath, the pH value is adjusted to be neutral, the volume is determined to be 100mL, then the mixture is diluted to the proper concentration, and the measurement method is the same as the above. Different sugars correspond to different standards.
FIG. 7 shows the difference between the Δ AcuM strain and the original strain under fermentation conditions, and the results show that after 96h fermentation, the yield of citric acid produced by the Δ AcuM strain fermentation is 185.3g/L on average, and the yield of citric acid produced by the original strain fermentation is 161.2g/L on average. In the sugar-acid conversion rate, the conversion rate of the delta AcuM strain reaches 102.9 percent, is improved by 13.4 percent compared with that of the original strain, and the period is also reduced from 84h to 72 h. Therefore, Aspergillus Niger (ATCC 12846) is a high-yield citric acid strain, the yield of the delta AcuM strain can be improved on the basis, the period is obviously shortened, the continuous fermentation effect is obviously enhanced, so that the method is greatly improved on the basis of producing citric acid by immobilized fermentation of Aspergillus Niger and is suitable for industrial production.
(3) And taking out the immobilized and fermented carrier for 4 days, and washing the immobilized and fermented carrier for 3 times by PBS to remove adsorbed hyphae. The amount of the original strain was excessive (FIG. 8) and the amount of the. DELTA. AcuM strain (FIG. 9) was moderate, thereby obtaining a carrier to which hyphae had adhered.
(4) And drying the mycelium-attached carrier, weighing, and subtracting the weight of the original carrier to obtain the weight of the attached membrane. The original strain had a membrane content of 5.34g/L, the Δ AcuM strain had a membrane content of 1.21g/L, and the membrane content was reduced by 77.3%.
Example 4: immobilized continuous fermentation experiment of genetically engineered bacteria
Immobilized continuous batch fermentation was performed based on example 3, i.e. in step 3(2), after each fermentation, the fermentation broth obtained from the fermentation was replaced with fresh immobilized fermentation medium, the fermentation was continued, and 12 batches were repeated.
Fig. 10 shows the difference in production intensity of the Δ AcuM strain and the original strain after 12 consecutive fermentations. As can be seen from the figure, the fermentation intensity of the AcuM strain is not obviously reduced after 12 batches of continuous fermentation, while the fermentation intensity of the original strain 12 batches is reduced by 69.1 percent, which shows that the continuous fermentation performance of the AcuM strain is obviously better than that of the original strain.
Example 5
Immobilized fermentation was performed on the basis of example 3, with the following modifications of the fermentation medium: glucose 250g/L, NaNO34.2g/L、KH2PO4 1.0g/L、MgSO4·7H2O is 0.5g/L and is prepared by bran extract; the preparation method of the bran leachate comprises the following steps: weighing 15g of bran, adding 800mL of water, boiling for 1h, filtering to obtain a filtrate, and adding water to a constant volume of 1L.
The conditions of the immobilized fermentation were as follows: culturing at 30 deg.C and 220r/min for 72 h.
After fermentation culture is carried out for 72h, the yield of citric acid of the delta AcuM strain reaches 261.1g/L, and the sugar-acid conversion rate reaches 104.4%.
The invention provides a recombinant aspergillus niger genetically engineered bacterium, a construction method and an application concept and a method, and a plurality of methods and ways for realizing the technical scheme are provided, the above description is only a preferred embodiment of the invention, and it should be noted that, for a person skilled in the art, a plurality of improvements and decorations can be made without departing from the principle of the invention, and the improvements and decorations should be regarded as the protection scope of the invention. All the components not specified in the present embodiment can be realized by the prior art.
Sequence listing
<110> Nanjing university of industry
<120> recombinant Aspergillus niger genetically engineered bacterium, construction method and application
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<170> SIPOSequenceListing 1.0
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<213> Aspergillus niger (Aspergillus niger)
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ggaacatgta agtaatgctc aattaaacct ctttgccaca aggtataact gacatatttt 360
gcagtgctcc ttggaagcta ctttagccac agtgactgat agtattgatc tcttaaaggc 420
tgaagtcgaa aaggaagaag ctatgctcga aagagagaaa aagcaacttc aggagatgga 480
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cttgatgcga ataactcatg aattttacgc tgatcttttc taggaacatc ctgttctgcg 600
gcaggtcgac agcttgcctg atgagtataa tcagaagcag accgagttta cccttgcggg 660
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cctgatgtcc gttgctgaca taccgtgttt agcttgaaaa tgacccagaa gtctcgaata 780
tcttgaaaca actgactgga catctgaagt caatgcaaaa caacaccgca cccgtcgctg 840
gtttgaagga cgcaattggc aggtcacatg cagcattaag tctgactttc atgcccgaag 900
actgaactta cagaattctg catcaatggc aagttcagaa cgagtgtgct gttacagcgt 960
gtacgacatg tggtgcgtat atcgaaagat gcaagcccat gccagtcttt aagacagctt 1020
ggaaaacgag tccatgcgta ggacggtatt cgacatcatg caatggacca aggtacctgc 1080
gagccagttt tgacgctacc tggaatggct atcgtctcaa ctgtgtgcaa aacccctggc 1140
gggacaccag tgctatacgg ggctaaacga attcccgcgc cttggagacc tagtcctcct 1200
attcaggaca agctaagccc tcatagcgtc ctaccacgtt ctcgtcagga attaggctct 1260
gggaattctt taggttcaag tggagtttag ccaaatattg acagcggacc cccaccagtt 1320
gactataggg aaagatgtcc agtgggctta gaggaaggtc gtgtctgggg atgctaatga 1380
ggcatcatct acgggttttt tgccacccta aaaccactta atacaacacc taattctgaa 1440
gaggaaacaa attactccat tgcctactct acagaacagc ttaatgtagg aacatgtggc 1500
tgcatatgct aggagcgagt taaccgaggt agaacccttg tagctatttc ccataacaga 1560
tagtcgttct atataccaac atcagaaata cgaggatcct gttgattgtg tatctacgtg 1620
atcgcgactc aaacaattga tattggctgc tttgctttct gcagtgagga tagtgttgca 1680
catgagttag ccgctcatat gcttttccga ggctactaac cggttcgccg ctgccggccc 1740
caatgcggag gggcccggga aatgaaagat ccaagtcccg caccagcggg gaacttcgat 1800
gagccgatcg catcgcgcgt gccctcacat tttcacgtta cagatcagcc cgatcccctc 1860
acccttctgc ttaatcggtc cattcaagcc cagtcgaatg tctgcagacg gctattttgc 1920
tccccgtttg tgttccgatc gacagcaaca gtggtaacca cgaaccgaac cctgcgcaac 1980
acctttgcgc ctagcgatca atgacggaga aaactgcggc gtcaacgggt ccaggccccg 2040
atcaacaaac cagcaatggg acagcagata gaacaaaacc ggatgtgacg gaggaggagc 2100
agactggggc agatgcgagt gcgaaagaca actcgcagaa tacaccgtcc ctcaaggcgg 2160
atggtgccgc cgcgggggct cactcaagtc ctaagaaacg tcgcaaagtc aatcatggta 2220
tggcgctatt tgctatgcat cctacaagga tccaggcagc gacttgcatt tttaccttgt 2280
tgtttcgacc acgatgctaa ccagagtgcc acgtttgtag catgcgttta ttgccgacga 2340
tcggtaaagt ctttcccctc aaacaagatt accttcctcg cccctcactt cagtcaacac 2400
gagccgacat cgtccttgat agttgttggg ctcaaggtat agaggagtac tttgctaact 2460
gaaagacact cgctcgcgtg gcacagcata tgacttgcga ctcggtacga cccgtctgag 2520
ctctaccctc cagcgcattc ccgtggaaca tggagtgcaa tcacttttcg agattccagt 2580
tgctgacggt tgttgctttg cgggaaatgt aggagcgacc ctgcacgcga tgcataaaac 2640
ggaatattgg ccacctttgc cacgatgaac ctcgggaacc ctcaaaacgg tcacggagcg 2700
aaaacgatca ttcggccgct gatgacgagg gctcttctaa taatgagtac tccggcgttc 2760
aaatgcccag aaacgtcgac ggcccagatg ctgcaggcca gcaaatcata cccgacggga 2820
ccatcggcct acccacctct tctgtgactt ctgtgcagca gcctggcaac atggcttctt 2880
ctggccaggg tcttaatgct caacagcaaa gtgagtgcca cccttataaa attgtccagt 2940
gtatcataat aacattgggt agtgattggg tacaacgaat ggattggtgg acaaagccag 3000
tttcaggaca tgcacacgtt tcacccttct tacatgttca atgcaccaga ggtcactaat 3060
gagtacaacc ttcttggtga ctttttgagc aatagcctct tggatgatgg aggagtattc 3120
cagaacgatg aactgcaggg aatctactcg gacccgtcgt tactcaattc catggcgact 3180
ctgggaaatt cgaatcaaag ccttcttcag cagtcccaac ctgcgcaacc tcaaccgaat 3240
caacaggccc agggcgagcc tttacaaggg cctacgcctg cagtgagcaa tgataaggcg 3300
agagagacct attacatgac cgcagcagat ccatcagggt ccgacccgcc agaggagcgg 3360
atgaacaagc ttctcaaagc gaaatacgac gcgggacttc ttcgcccatt taactacgtc 3420
aagggttatg ccaggctgaa tcaatatatg gagcgacact tgcaacaagc ctcgcggcag 3480
aagatcctcc gacaattaga taaattccgg ccaaagttcc gggagcgaat gcagagcctg 3540
accgacattg agctcatcct cgtggagatg tggttcgaaa gaagcttgat ggaatatgat 3600
cgagtttttg ctagtatggc cattcctgcc tgttgctgga gacgaacggg tgaaatattc 3660
cgtggcaaca aagaaatggc agagttgatc ggcgtaccaa tcgagactct ccgagacgta 3720
agtgcattct gcagaaatct ctatgacaaa aatctaatat gactgtcata ctcagggaaa 3780
gcttgcaatc cacgagatca tcgtggaaga tcagctagtg agctattggg agaaattcgg 3840
agctattgct tttgataaca cgcaaaaagc catgctcaca agctgcaccc taaagaatcc 3900
caactccaac tcccccggag atgggatccc ctgttgcttc tcgtttacta ttcgaagaga 3960
tacccataac atgtgagtga gctcatcaga tgacgcggtg gcaaggtgct aactgctgtt 4020
gatatagccc atcactcatt attgggaatt tcctgccgtc acagcgaaag gccaaataag 4080
ccctggagtt tttttttatc attttatttc tctatcattg cccagcaaat gttcgcgtgg 4140
gctgatgcct ggttactgtc ttctttcttg gtgcttactg gcccttctga tggaggagcc 4200
tcgcgatatt gtttccttca tacccttctg tcattgattt atacggcctt caaaaatgta 4260
ccataacatc ttcaaggcgt gactcgtttc caagggaagg ttaattgtgg tcttgcaacg 4320
cgaaccgaaa atggactaga taggtcaggt gtcatctcgt acttcgcttc gggtgtcgac 4380
cgagtatccg tagcactaca ttcctcatct ttaaagccat taggacaacg actagagtta 4440
accacaagcg ctgctattga catgacacat cacagctcaa aagcacacat ggacgtcgtt 4500
ctaggtgcag cacctttccc gcatgccgtt tcatacctct cattgcctca tctactaaga 4560
acgaagcaac agacttcgca gctgagctaa ccaatagtct cgttatcgac caaaagaagc 4620
ctcatcttgg tctagatgat aaaatcttgg ctcaactgga tcggcaattc aagcactttc 4680
ctctgctgcc agcgagtccc tcgtctccga ctcgtcgcgg gtttgaccaa gaaggaacaa 4740
agctatggaa tatttgcatg caactcatga ctgtctatag agacagaagt gaagaccttc 4800
tccttgcgtg caaaggtact actgtgggat cccaaggaca cagactttcg ctgagtacag 4860
tatagtgaag gcattcgctt acgcgatgtt ggactatgcc gcaccatatc aaggccaggg 4920
taagtataac acacttatct attgtaagga ttcgagaaag ctaatattac caggaagcaa 4980
cagggcctta gaggcagcct tcagcatagc aatgacgtgc ataggtaaga gcagatcctt 5040
gttgctttct ccaatttccc ttgcacgtag ctctaacatc ttgcatatag acaacgactg 5100
tctcagtcta agccagaaaa tcatcgaagt cgcagctgtg cggttagata aacttgagag 5160
atatgaaagc gatgtcgaaa attctaagct tcaacaatat accatcgagt actacatgat 5220
tcgtgcccac ttggtatggt ctacccgtct gtaataatac acatcagact gacagctggg 5280
acctaagtag gcctggctgc agggaagact cgacatcgca gaacacttgt tctcgaagat 5340
accagtatct gataatggca ggggtcaaga acgtgtcatg gacatatgct ataagatcgg 5400
taactgtgcg atttcacaca agcagtatga tgtctctatg aagtggctag aaagagcgtt 5460
gagggcatgt gagtccatta ggcatatgca acaggcatcg atactgtcaa acaaggataa 5520
agagctcttg atacttcatg cttctggtag ggtgctcctg gttgatgaca aagttaagtt 5580
tgttcacaaa gaatagttcg tgccggcctt catcttgatc ctgaagagca cagtggcttc 5640
ctttctgaag ctctggatgc attgaaattc gtaagtcttg atatccagtt gttatatatt 5700
gctaatattt aacagcgtta cggtggcatg ttccctgtcc aggtcatcca acttgagatg 5760
ctggacaagg aaggagcaga tgagattgtc ttttcgcaag gtgactgaat tatagttcgt 5820
gattgttttc cctcttcgac tgacataaga gttaacagtg ctacaaagta ccattgaatc 5880
gcctgagctt aaagactcac acctcgcaat gtaatggcca atatgaactc gtgtacgccg 5940
tccggtacta acaaagtggg tgtagcatca tgtattatat acagaagctg tttaatacat 6000
cgtgagcgca ccggtcacat ctgtctgctc atctgacaag taaccagtcc cgaggtctcc 6060
atcagtatgc tcaagcaac 6079
<210> 2
<211> 6740
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 2
aaggaccatc aaatccaagt ggtccacact tccggagcct gttcaagaca gggtgcgcga 60
catgtttcgg gccctggagc gtccggttat cgtaagacag cagaacgagg gcaaacgtat 120
cgaagcacag gctgctgttc aggctgttgt gaaaaagtat agttctttgc cttttggctc 180
gaggagaatg atcatactaa tttgtatttc ccaactgtat agtctaggaa aaaggcttcc 240
gcgcatgcca tttcctccag ttacgaaaga ctctgtcttt gagtacgagg cagcgctcaa 300
ggaacatgta agtaatgctc aattaaacct ctttgccaca aggtataact gacatatttt 360
gcagtgctcc ttggaagcta ctttagccac agtgactgat agtattgatc tcttaaaggc 420
tgaagtcgaa aaggaagaag ctatgctcga aagagagaaa aagcaacttc aggagatgga 480
gaggaatgcg aagcgggcgg aagcggagag gaagaggcaa tcaaagaacg taagtgtgac 540
cttgatgcga ataactcatg aattttacgc tgatcttttc taggaacatc ctgttctgcg 600
gcaggtcgac agcttgcctg atgagtataa tcagaagcag accgagttta cccttgcggg 660
aggaaaagaa acccagacga tgttcgacga ggtgcgtttt cagctcccct tgtaccttcg 720
cctgatgtcc gttgctgaca taccgtgttt agcttgaaaa tgacccagaa gtctcgaata 780
tcttgaaaca actgactgga catctgaagt caatgcaaaa caacaccgca cccgtcgctg 840
gtttgaagga cgcaattggc aggtcacatg cagcattaag tctgactttc atgcccgaag 900
actgaactta cagaattctg catcaatggc aagttcagaa cgagtgtgct gttacagcgt 960
gtacgacatg tggtgcgtat atcgaaagat gcaagcccat gccagtcttt aagacagctt 1020
ggaaaacgag tccatgcgta ggacggtatt cgacatcatg caatggacca aggtacctgc 1080
gagccagttt tgacgctacc tggaatggct atcgtctcaa ctgtgtgcaa aacccctggc 1140
gggacaccag tgctatacgg ggctaaacga attcccgcgc cttggagacc tagtcctcct 1200
attcaggaca agctaagccc tcatagcgtc ctaccacgtt ctcgtcagga attaggctct 1260
gggaattctt taggttcaag tggagtttag ccaaatattg acagcggacc cccaccagtt 1320
gactataggg aaagatgtcc agtgggctta gaggaaggtc gtgtctgggg atgctaatga 1380
ggcatcatct acgggttttt tgccacccta aaaccactta atacaacacc taattctgaa 1440
gaggaaacaa attactccat tgcctactct acagaacagc ttaatgtagg aacatgtggc 1500
tgcatatgct aggagcgagt taaccgaggt agaacccttg tagctatttc ccataacaga 1560
tagtcgttct atataccaac atcagaaata cgaggatcct gttgattgtg tatctacgtg 1620
atcgcgactc aaacaattga tattggctgc tttgctttct gcagtgagga tagtgttgca 1680
catgagttag ccgctcatat gcttttccga ggctactaac cggttcgccg ctgccggccc 1740
caatgcggag gggcccggga aatgaaagat ccaagtcccg caccagcggg gaacttcgat 1800
gagccgatcg catcgcgcgt gccctcacat tttcacgtta cagatcagcc cgatcccctc 1860
acccttctgc ttaatcggtc cattcaagcc cagtcgaatg tctgcagacg gctattttgc 1920
tccccgtttg tgttccgatc gacagcaaca gtggtaacca cgaaccgaac cctgcgcaac 1980
acctttgcgc ctagcgatca taaaatccgc cgcctccacc atttgtagaa aaatgtgacg 2040
aactcgtgag ctctgtacag tgaccggtga ctctttctgg catgcggaga gacggacgga 2100
cgcagagaga agggctgagt aataagccac tggccagaca gctctggcgg ctctgaggtg 2160
cagtggatga ttattaatcc gggaccggcc gcccctccgc cccgaagtgg aaaggctggt 2220
gtgcccctcg ttgaccaaga atctattgca tcatcggaga atatggagct tcatcgaatc 2280
accggcagta agcgaaggag aatgtgaagc caggggtgta tagccgtcgg cgaaatagca 2340
tgccattaac ctaggtacag aagtccaatt gcttccgatc tggtaaaaga ttcacgagat 2400
agtaccttct ccgaagtagg tagagcgagt acccggcgcg taagctccct aattggccca 2460
tccggcatct gtagggcgtc caaatatcgt gcctctcctg ctttgcccgg tgtatgaaac 2520
cggaaaggcc gctcaggagc tggccagcgg cgcagaccgg gaacacaagc tggcagtcga 2580
cccatccggt gctctgcact cgacctgctg aggtccctca gtccctggta ggcagctttg 2640
ccccgtctgt ccgcccggtg tgtcggcggg gttgacaagg tcgttgcgtc agtccaacat 2700
ttgttgccat attttcctgc tctccccacc agctgctctt ttcttttctc tttcttttcc 2760
catcttcagt atattcatct tcccatccaa gaacctttat ttcccctaag taagtacttt 2820
gctacatcca tactccatcc ttcccatccc ttattccttt gaacctttca gttcgagctt 2880
tcccacttca tcgcagcttg actaacagct accccgcttg agcagacatc accatgcctg 2940
aactcaccgc gacgtctgtc gagaagtttc tgatcgaaaa gttcgacagc gtctccgacc 3000
tgatgcagct ctcggagggc gaagaatctc gtgctttcag cttcgatgta ggagggcgtg 3060
gatatgtcct gcgggtaaat agctgcgccg atggtttcta caaagatcgt tatgtttatc 3120
ggcactttgc atcggccgcg ctcccgattc cggaagtgct tgacattggg gaattcagcg 3180
agagcctgac ctattgcatc tcccgccgtg cacagggtgt cacgttgcaa gacctgcctg 3240
aaaccgaact gcccgctgtt ctgcagccgg tcgcggaggc catggatgcg atcgctgcgg 3300
ccgatcttag ccagacgagc gggttcggcc cattcggacc gcaaggaatc ggtcaataca 3360
ctacatggcg tgatttcata tgcgcgattg ctgatcccca tgtgtatcac tggcaaactg 3420
tgatggacga caccgtcagt gcgtccgtcg cgcaggctct cgatgagctg atgctttggg 3480
ccgaggactg ccccgaagtc cggcacctcg tgcacgcgga tttcggctcc aacaatgtcc 3540
tgacggacaa tggccgcata acagcggtca ttgactggag cgaggcgatg ttcggggatt 3600
cccaatacga ggtcgccaac atcttcttct ggaggccgtg gttggcttgt atggagcagc 3660
agacgcgcta cttcgagcgg aggcatccgg agcttgcagg atcgccgcgg ctccgggcgt 3720
atatgctccg cattggtctt gaccaactct atcagagctt ggttgacggc aatttcgatg 3780
atgcagcttg ggcgcagggt cgatgcgacg caatcgtccg atccggagcc gggactgtcg 3840
ggcgtacaca aatcgcccgc agaagcgcgg ccgtctggac cgatggctgt gtagaagtac 3900
tcgccgatag tggaaaccga cgccccagca ctcgtccgag ggcaaaggaa tagagtagat 3960
gccgaccgcg ggatccactt aacgttactg aaatcatcaa acagcttgac gaatctggat 4020
ataagatcgt tggtgtcgat gtcagctccg gagttgagac aaatggtgtt caggatctcg 4080
ataagatacg ttcatttgtc caagcagcaa agagtgcctt ctagtgattt aatagctcca 4140
tgtcaacaag aataaaacgc gttttcgggt ttacctcttc cagatacagc tcatctgcaa 4200
tgcattaatg cattgactgc aacctagtaa cgccttncag gctccggcga agagaagaat 4260
agcttagcag agctattttc attttcggga gacgagatca agcagatcaa cggtcgtcaa 4320
gagacctacg agactgagga atccgctctt ggctccacgc gactatatat ttgtctctaa 4380
ttgtactttg acatgctcct cttctttact ctgatagctt gactatgaaa attccgtcac 4440
cagcncctgg gttcgcaaag ataattgcat gtttcttcct tgaactctca agcctacagg 4500
acacacattc atcgtaggta taaacctcga aatcanttcc tactaagatg gtatacaata 4560
gtaaccatgc atggttgcct agtgaatgct ccgtaacacc caatacgccg gccgaaactt 4620
ttttacaact ctcctatgag tcgtttaccc agaatgcaca ggtacacttg tttagaggta 4680
atccttcttt ctagaagtcc tcgtgtactg tgtaagcgcc cactccacat ctccactcga 4740
gccctggagt ttttttttat cattttattt ctctatcatt gcccagcaaa tgttcgcgtg 4800
ggctgatgcc tggttactgt cttctttctt ggtgcttact ggcccttctg atggaggagc 4860
ctcgcgatat tgtttccttc atacccttct gtcattgatt tatacggcct tcaaaaatgt 4920
accataacat cttcaaggcg tgactcgttt ccaagggaag gttaattgtg gtcttgcaac 4980
gcgaaccgaa aatggactag ataggtcagg tgtcatctcg tacttcgctt cgggtgtcga 5040
ccgagtatcc gtagcactac attcctcatc tttaaagcca ttaggacaac gactagagtt 5100
aaccacaagc gctgctattg acatgacaca tcacagctca aaagcacaca tggacgtcgt 5160
tctaggtgca gcacctttcc cgcatgccgt ttcatacctc tcattgcctc atctactaag 5220
aacgaagcaa cagacttcgc agctgagcta accaatagtc tcgttatcga ccaaaagaag 5280
cctcatcttg gtctagatga taaaatcttg gctcaactgg atcggcaatt caagcacttt 5340
cctctgctgc cagcgagtcc ctcgtctccg actcgtcgcg ggtttgacca agaaggaaca 5400
aagctatgga atatttgcat gcaactcatg actgtctata gagacagaag tgaagacctt 5460
ctccttgcgt gcaaaggtac tactgtggga tcccaaggac acagactttc gctgagtaca 5520
gtatagtgaa ggcattcgct tacgcgatgt tggactatgc cgcaccatat caaggccagg 5580
gtaagtataa cacacttatc tattgtaagg attcgagaaa gctaatatta ccaggaagca 5640
acagggcctt agaggcagcc ttcagcatag caatgacgtg cataggtaag agcagatcct 5700
tgttgctttc tccaatttcc cttgcacgta gctctaacat cttgcatata gacaacgact 5760
gtctcagtct aagccagaaa atcatcgaag tcgcagctgt gcggttagat aaacttgaga 5820
gatatgaaag cgatgtcgaa aattctaagc ttcaacaata taccatcgag tactacatga 5880
ttcgtgccca cttggtatgg tctacccgtc tgtaataata cacatcagac tgacagctgg 5940
gacctaagta ggcctggctg cagggaagac tcgacatcgc agaacacttg ttctcgaaga 6000
taccagtatc tgataatggc aggggtcaag aacgtgtcat ggacatatgc tataagatcg 6060
gtaactgtgc gatttcacac aagcagtatg atgtctctat gaagtggcta gaaagagcgt 6120
tgagggcatg tgagtccatt aggcatatgc aacaggcatc gatactgtca aacaaggata 6180
aagagctctt gatacttcat gcttctggta gggtgctcct ggttgatgac aaagttaagt 6240
ttgttcacaa agaatagttc gtgccggcct tcatcttgat cctgaagagc acagtggctt 6300
cctttctgaa gctctggatg cattgaaatt cgtaagtctt gatatccagt tgttatatat 6360
tgctaatatt taacagcgtt acggtggcat gttccctgtc caggtcatcc aacttgagat 6420
gctggacaag gaaggagcag atgagattgt cttttcgcaa ggtgactgaa ttatagttcg 6480
tgattgtttt ccctcttcga ctgacataag agttaacagt gctacaaagt accattgaat 6540
cgcctgagct taaagactca cacctcgcaa tgtaatggcc aatatgaact cgtgtacgcc 6600
gtccggtact aacaaagtgg gtgtagcatc atgtattata tacagaagct gtttaataca 6660
tcgtgagcgc accggtcaca tctgtctgct catctgacaa gtaaccagtc ccgaggtctc 6720
catcagtatg ctcaagcaac 6740
<210> 3
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 3
aaggaccatc aaatccaagt 20
<210> 4
<211> 40
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
ggtggaggcg gcggatttta tgatcgctag gcgcaaaggt 40
<210> 5
<211> 40
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 5
cactccacat ctccactcga gccctggagt ttttttttat 40
<210> 6
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 6
<210> 7
<211> 40
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 7
acctttgcgc ctagcgatca taaaatccgc cgcctccacc 40
<210> 8
<211> 40
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 8
ataaaaaaaa actccagggc tcgagtggag atgtggagtg 40
<210> 9
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 9
aaggaccatc aaatccaagt 20
<210> 10
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 10
<210> 11
<211> 2000
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 11
aaggaccatc aaatccaagt ggtccacact tccggagcct gttcaagaca gggtgcgcga 60
catgtttcgg gccctggagc gtccggttat cgtaagacag cagaacgagg gcaaacgtat 120
cgaagcacag gctgctgttc aggctgttgt gaaaaagtat agttctttgc cttttggctc 180
gaggagaatg atcatactaa tttgtatttc ccaactgtat agtctaggaa aaaggcttcc 240
gcgcatgcca tttcctccag ttacgaaaga ctctgtcttt gagtacgagg cagcgctcaa 300
ggaacatgta agtaatgctc aattaaacct ctttgccaca aggtataact gacatatttt 360
gcagtgctcc ttggaagcta ctttagccac agtgactgat agtattgatc tcttaaaggc 420
tgaagtcgaa aaggaagaag ctatgctcga aagagagaaa aagcaacttc aggagatgga 480
gaggaatgcg aagcgggcgg aagcggagag gaagaggcaa tcaaagaacg taagtgtgac 540
cttgatgcga ataactcatg aattttacgc tgatcttttc taggaacatc ctgttctgcg 600
gcaggtcgac agcttgcctg atgagtataa tcagaagcag accgagttta cccttgcggg 660
aggaaaagaa acccagacga tgttcgacga ggtgcgtttt cagctcccct tgtaccttcg 720
cctgatgtcc gttgctgaca taccgtgttt agcttgaaaa tgacccagaa gtctcgaata 780
tcttgaaaca actgactgga catctgaagt caatgcaaaa caacaccgca cccgtcgctg 840
gtttgaagga cgcaattggc aggtcacatg cagcattaag tctgactttc atgcccgaag 900
actgaactta cagaattctg catcaatggc aagttcagaa cgagtgtgct gttacagcgt 960
gtacgacatg tggtgcgtat atcgaaagat gcaagcccat gccagtcttt aagacagctt 1020
ggaaaacgag tccatgcgta ggacggtatt cgacatcatg caatggacca aggtacctgc 1080
gagccagttt tgacgctacc tggaatggct atcgtctcaa ctgtgtgcaa aacccctggc 1140
gggacaccag tgctatacgg ggctaaacga attcccgcgc cttggagacc tagtcctcct 1200
attcaggaca agctaagccc tcatagcgtc ctaccacgtt ctcgtcagga attaggctct 1260
gggaattctt taggttcaag tggagtttag ccaaatattg acagcggacc cccaccagtt 1320
gactataggg aaagatgtcc agtgggctta gaggaaggtc gtgtctgggg atgctaatga 1380
ggcatcatct acgggttttt tgccacccta aaaccactta atacaacacc taattctgaa 1440
gaggaaacaa attactccat tgcctactct acagaacagc ttaatgtagg aacatgtggc 1500
tgcatatgct aggagcgagt taaccgaggt agaacccttg tagctatttc ccataacaga 1560
tagtcgttct atataccaac atcagaaata cgaggatcct gttgattgtg tatctacgtg 1620
atcgcgactc aaacaattga tattggctgc tttgctttct gcagtgagga tagtgttgca 1680
catgagttag ccgctcatat gcttttccga ggctactaac cggttcgccg ctgccggccc 1740
caatgcggag gggcccggga aatgaaagat ccaagtcccg caccagcggg gaacttcgat 1800
gagccgatcg catcgcgcgt gccctcacat tttcacgtta cagatcagcc cgatcccctc 1860
acccttctgc ttaatcggtc cattcaagcc cagtcgaatg tctgcagacg gctattttgc 1920
tccccgtttg tgttccgatc gacagcaaca gtggtaacca cgaaccgaac cctgcgcaac 1980
<210> 12
<211> 2000
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 12
gccctggagt ttttttttat cattttattt ctctatcatt gcccagcaaa tgttcgcgtg 60
ggctgatgcc tggttactgt cttctttctt ggtgcttact ggcccttctg atggaggagc 120
ctcgcgatat tgtttccttc atacccttct gtcattgatt tatacggcct tcaaaaatgt 180
accataacat cttcaaggcg tgactcgttt ccaagggaag gttaattgtg gtcttgcaac 240
gcgaaccgaa aatggactag ataggtcagg tgtcatctcg tacttcgctt cgggtgtcga 300
ccgagtatcc gtagcactac attcctcatc tttaaagcca ttaggacaac gactagagtt 360
aaccacaagc gctgctattg acatgacaca tcacagctca aaagcacaca tggacgtcgt 420
tctaggtgca gcacctttcc cgcatgccgt ttcatacctc tcattgcctc atctactaag 480
aacgaagcaa cagacttcgc agctgagcta accaatagtc tcgttatcga ccaaaagaag 540
cctcatcttg gtctagatga taaaatcttg gctcaactgg atcggcaatt caagcacttt 600
cctctgctgc cagcgagtcc ctcgtctccg actcgtcgcg ggtttgacca agaaggaaca 660
aagctatgga atatttgcat gcaactcatg actgtctata gagacagaag tgaagacctt 720
ctccttgcgt gcaaaggtac tactgtggga tcccaaggac acagactttc gctgagtaca 780
gtatagtgaa ggcattcgct tacgcgatgt tggactatgc cgcaccatat caaggccagg 840
gtaagtataa cacacttatc tattgtaagg attcgagaaa gctaatatta ccaggaagca 900
acagggcctt agaggcagcc ttcagcatag caatgacgtg cataggtaag agcagatcct 960
tgttgctttc tccaatttcc cttgcacgta gctctaacat cttgcatata gacaacgact 1020
gtctcagtct aagccagaaa atcatcgaag tcgcagctgt gcggttagat aaacttgaga 1080
gatatgaaag cgatgtcgaa aattctaagc ttcaacaata taccatcgag tactacatga 1140
ttcgtgccca cttggtatgg tctacccgtc tgtaataata cacatcagac tgacagctgg 1200
gacctaagta ggcctggctg cagggaagac tcgacatcgc agaacacttg ttctcgaaga 1260
taccagtatc tgataatggc aggggtcaag aacgtgtcat ggacatatgc tataagatcg 1320
gtaactgtgc gatttcacac aagcagtatg atgtctctat gaagtggcta gaaagagcgt 1380
tgagggcatg tgagtccatt aggcatatgc aacaggcatc gatactgtca aacaaggata 1440
aagagctctt gatacttcat gcttctggta gggtgctcct ggttgatgac aaagttaagt 1500
ttgttcacaa agaatagttc gtgccggcct tcatcttgat cctgaagagc acagtggctt 1560
cctttctgaa gctctggatg cattgaaatt cgtaagtctt gatatccagt tgttatatat 1620
tgctaatatt taacagcgtt acggtggcat gttccctgtc caggtcatcc aacttgagat 1680
gctggacaag gaaggagcag atgagattgt cttttcgcaa ggtgactgaa ttatagttcg 1740
tgattgtttt ccctcttcga ctgacataag agttaacagt gctacaaagt accattgaat 1800
cgcctgagct taaagactca cacctcgcaa tgtaatggcc aatatgaact cgtgtacgcc 1860
gtccggtact aacaaagtgg gtgtagcatc atgtattata tacagaagct gtttaataca 1920
tcgtgagcgc accggtcaca tctgtctgct catctgacaa gtaaccagtc ccgaggtctc 1980
<210> 13
<211> 1192
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 13
atcttcagta tattcatctt cccatccaag aacctttatt tcccctaagt aagtactttg 60
ctacatccat actccatcct tcccatccct tattcctttg aacctttcag ttcgagcttt 120
cccacttcat cgcagcttga ctaacagcta ccccgcttga gcagacatca ccatgcctga 180
actcaccgcg acgtctgtcg agaagtttct gatcgaaaag ttcgacagcg tctccgacct 240
gatgcagctc tcggagggcg aagaatctcg tgctttcagc ttcgatgtag gagggcgtgg 300
atatgtcctg cgggtaaata gctgcgccga tggtttctac aaagatcgtt atgtttatcg 360
gcactttgca tcggccgcgc tcccgattcc ggaagtgctt gacattgggg aattcagcga 420
gagcctgacc tattgcatct cccgccgtgc acagggtgtc acgttgcaag acctgcctga 480
aaccgaactg cccgctgttc tgcagccggt cgcggaggcc atggatgcga tcgctgcggc 540
cgatcttagc cagacgagcg ggttcggccc attcggaccg caaggaatcg gtcaatacac 600
tacatggcgt gatttcatat gcgcgattgc tgatccccat gtgtatcact ggcaaactgt 660
gatggacgac accgtcagtg cgtccgtcgc gcaggctctc gatgagctga tgctttgggc 720
cgaggactgc cccgaagtcc ggcacctcgt gcacgcggat ttcggctcca acaatgtcct 780
gacggacaat ggccgcataa cagcggtcat tgactggagc gaggcgatgt tcggggattc 840
ccaatacgag gtcgccaaca tcttcttctg gaggccgtgg ttggcttgta tggagcagca 900
gacgcgctac ttcgagcgga ggcatccgga gcttgcagga tcgccgcggc tccgggcgta 960
tatgctccgc attggtcttg accaactcta tcagagcttg gttgacggca atttcgatga 1020
tgcagcttgg gcgcagggtc gatgcgacgc aatcgtccga tccggagccg ggactgtcgg 1080
gcgtacacaa atcgcccgca gaagcgcggc cgtctggacc gatggctgtg tagaagtact 1140
cgccgatagt ggaaaccgac gccccagcac tcgtccgagg gcaaaggaat ag 1192
<210> 14
<211> 6740
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 14
aaggaccatc aaatccaagt ggtccacact tccggagcct gttcaagaca gggtgcgcga 60
catgtttcgg gccctggagc gtccggttat cgtaagacag cagaacgagg gcaaacgtat 120
cgaagcacag gctgctgttc aggctgttgt gaaaaagtat agttctttgc cttttggctc 180
gaggagaatg atcatactaa tttgtatttc ccaactgtat agtctaggaa aaaggcttcc 240
gcgcatgcca tttcctccag ttacgaaaga ctctgtcttt gagtacgagg cagcgctcaa 300
ggaacatgta agtaatgctc aattaaacct ctttgccaca aggtataact gacatatttt 360
gcagtgctcc ttggaagcta ctttagccac agtgactgat agtattgatc tcttaaaggc 420
tgaagtcgaa aaggaagaag ctatgctcga aagagagaaa aagcaacttc aggagatgga 480
gaggaatgcg aagcgggcgg aagcggagag gaagaggcaa tcaaagaacg taagtgtgac 540
cttgatgcga ataactcatg aattttacgc tgatcttttc taggaacatc ctgttctgcg 600
gcaggtcgac agcttgcctg atgagtataa tcagaagcag accgagttta cccttgcggg 660
aggaaaagaa acccagacga tgttcgacga ggtgcgtttt cagctcccct tgtaccttcg 720
cctgatgtcc gttgctgaca taccgtgttt agcttgaaaa tgacccagaa gtctcgaata 780
tcttgaaaca actgactgga catctgaagt caatgcaaaa caacaccgca cccgtcgctg 840
gtttgaagga cgcaattggc aggtcacatg cagcattaag tctgactttc atgcccgaag 900
actgaactta cagaattctg catcaatggc aagttcagaa cgagtgtgct gttacagcgt 960
gtacgacatg tggtgcgtat atcgaaagat gcaagcccat gccagtcttt aagacagctt 1020
ggaaaacgag tccatgcgta ggacggtatt cgacatcatg caatggacca aggtacctgc 1080
gagccagttt tgacgctacc tggaatggct atcgtctcaa ctgtgtgcaa aacccctggc 1140
gggacaccag tgctatacgg ggctaaacga attcccgcgc cttggagacc tagtcctcct 1200
attcaggaca agctaagccc tcatagcgtc ctaccacgtt ctcgtcagga attaggctct 1260
gggaattctt taggttcaag tggagtttag ccaaatattg acagcggacc cccaccagtt 1320
gactataggg aaagatgtcc agtgggctta gaggaaggtc gtgtctgggg atgctaatga 1380
ggcatcatct acgggttttt tgccacccta aaaccactta atacaacacc taattctgaa 1440
gaggaaacaa attactccat tgcctactct acagaacagc ttaatgtagg aacatgtggc 1500
tgcatatgct aggagcgagt taaccgaggt agaacccttg tagctatttc ccataacaga 1560
tagtcgttct atataccaac atcagaaata cgaggatcct gttgattgtg tatctacgtg 1620
atcgcgactc aaacaattga tattggctgc tttgctttct gcagtgagga tagtgttgca 1680
catgagttag ccgctcatat gcttttccga ggctactaac cggttcgccg ctgccggccc 1740
caatgcggag gggcccggga aatgaaagat ccaagtcccg caccagcggg gaacttcgat 1800
gagccgatcg catcgcgcgt gccctcacat tttcacgtta cagatcagcc cgatcccctc 1860
acccttctgc ttaatcggtc cattcaagcc cagtcgaatg tctgcagacg gctattttgc 1920
tccccgtttg tgttccgatc gacagcaaca gtggtaacca cgaaccgaac cctgcgcaac 1980
acctttgcgc ctagcgatca taaaatccgc cgcctccacc atttgtagaa aaatgtgacg 2040
aactcgtgag ctctgtacag tgaccggtga ctctttctgg catgcggaga gacggacgga 2100
cgcagagaga agggctgagt aataagccac tggccagaca gctctggcgg ctctgaggtg 2160
cagtggatga ttattaatcc gggaccggcc gcccctccgc cccgaagtgg aaaggctggt 2220
gtgcccctcg ttgaccaaga atctattgca tcatcggaga atatggagct tcatcgaatc 2280
accggcagta agcgaaggag aatgtgaagc caggggtgta tagccgtcgg cgaaatagca 2340
tgccattaac ctaggtacag aagtccaatt gcttccgatc tggtaaaaga ttcacgagat 2400
agtaccttct ccgaagtagg tagagcgagt acccggcgcg taagctccct aattggccca 2460
tccggcatct gtagggcgtc caaatatcgt gcctctcctg ctttgcccgg tgtatgaaac 2520
cggaaaggcc gctcaggagc tggccagcgg cgcagaccgg gaacacaagc tggcagtcga 2580
cccatccggt gctctgcact cgacctgctg aggtccctca gtccctggta ggcagctttg 2640
ccccgtctgt ccgcccggtg tgtcggcggg gttgacaagg tcgttgcgtc agtccaacat 2700
ttgttgccat attttcctgc tctccccacc agctgctctt ttcttttctc tttcttttcc 2760
catcttcagt atattcatct tcccatccaa gaacctttat ttcccctaag taagtacttt 2820
gctacatcca tactccatcc ttcccatccc ttattccttt gaacctttca gttcgagctt 2880
tcccacttca tcgcagcttg actaacagct accccgcttg agcagacatc accatgcctg 2940
aactcaccgc gacgtctgtc gagaagtttc tgatcgaaaa gttcgacagc gtctccgacc 3000
tgatgcagct ctcggagggc gaagaatctc gtgctttcag cttcgatgta ggagggcgtg 3060
gatatgtcct gcgggtaaat agctgcgccg atggtttcta caaagatcgt tatgtttatc 3120
ggcactttgc atcggccgcg ctcccgattc cggaagtgct tgacattggg gaattcagcg 3180
agagcctgac ctattgcatc tcccgccgtg cacagggtgt cacgttgcaa gacctgcctg 3240
aaaccgaact gcccgctgtt ctgcagccgg tcgcggaggc catggatgcg atcgctgcgg 3300
ccgatcttag ccagacgagc gggttcggcc cattcggacc gcaaggaatc ggtcaataca 3360
ctacatggcg tgatttcata tgcgcgattg ctgatcccca tgtgtatcac tggcaaactg 3420
tgatggacga caccgtcagt gcgtccgtcg cgcaggctct cgatgagctg atgctttggg 3480
ccgaggactg ccccgaagtc cggcacctcg tgcacgcgga tttcggctcc aacaatgtcc 3540
tgacggacaa tggccgcata acagcggtca ttgactggag cgaggcgatg ttcggggatt 3600
cccaatacga ggtcgccaac atcttcttct ggaggccgtg gttggcttgt atggagcagc 3660
agacgcgcta cttcgagcgg aggcatccgg agcttgcagg atcgccgcgg ctccgggcgt 3720
atatgctccg cattggtctt gaccaactct atcagagctt ggttgacggc aatttcgatg 3780
atgcagcttg ggcgcagggt cgatgcgacg caatcgtccg atccggagcc gggactgtcg 3840
ggcgtacaca aatcgcccgc agaagcgcgg ccgtctggac cgatggctgt gtagaagtac 3900
tcgccgatag tggaaaccga cgccccagca ctcgtccgag ggcaaaggaa tagagtagat 3960
gccgaccgcg ggatccactt aacgttactg aaatcatcaa acagcttgac gaatctggat 4020
ataagatcgt tggtgtcgat gtcagctccg gagttgagac aaatggtgtt caggatctcg 4080
ataagatacg ttcatttgtc caagcagcaa agagtgcctt ctagtgattt aatagctcca 4140
tgtcaacaag aataaaacgc gttttcgggt ttacctcttc cagatacagc tcatctgcaa 4200
tgcattaatg cattgactgc aacctagtaa cgccttncag gctccggcga agagaagaat 4260
agcttagcag agctattttc attttcggga gacgagatca agcagatcaa cggtcgtcaa 4320
gagacctacg agactgagga atccgctctt ggctccacgc gactatatat ttgtctctaa 4380
ttgtactttg acatgctcct cttctttact ctgatagctt gactatgaaa attccgtcac 4440
cagcncctgg gttcgcaaag ataattgcat gtttcttcct tgaactctca agcctacagg 4500
acacacattc atcgtaggta taaacctcga aatcanttcc tactaagatg gtatacaata 4560
gtaaccatgc atggttgcct agtgaatgct ccgtaacacc caatacgccg gccgaaactt 4620
ttttacaact ctcctatgag tcgtttaccc agaatgcaca ggtacacttg tttagaggta 4680
atccttcttt ctagaagtcc tcgtgtactg tgtaagcgcc cactccacat ctccactcga 4740
gccctggagt ttttttttat cattttattt ctctatcatt gcccagcaaa tgttcgcgtg 4800
ggctgatgcc tggttactgt cttctttctt ggtgcttact ggcccttctg atggaggagc 4860
ctcgcgatat tgtttccttc atacccttct gtcattgatt tatacggcct tcaaaaatgt 4920
accataacat cttcaaggcg tgactcgttt ccaagggaag gttaattgtg gtcttgcaac 4980
gcgaaccgaa aatggactag ataggtcagg tgtcatctcg tacttcgctt cgggtgtcga 5040
ccgagtatcc gtagcactac attcctcatc tttaaagcca ttaggacaac gactagagtt 5100
aaccacaagc gctgctattg acatgacaca tcacagctca aaagcacaca tggacgtcgt 5160
tctaggtgca gcacctttcc cgcatgccgt ttcatacctc tcattgcctc atctactaag 5220
aacgaagcaa cagacttcgc agctgagcta accaatagtc tcgttatcga ccaaaagaag 5280
cctcatcttg gtctagatga taaaatcttg gctcaactgg atcggcaatt caagcacttt 5340
cctctgctgc cagcgagtcc ctcgtctccg actcgtcgcg ggtttgacca agaaggaaca 5400
aagctatgga atatttgcat gcaactcatg actgtctata gagacagaag tgaagacctt 5460
ctccttgcgt gcaaaggtac tactgtggga tcccaaggac acagactttc gctgagtaca 5520
gtatagtgaa ggcattcgct tacgcgatgt tggactatgc cgcaccatat caaggccagg 5580
gtaagtataa cacacttatc tattgtaagg attcgagaaa gctaatatta ccaggaagca 5640
acagggcctt agaggcagcc ttcagcatag caatgacgtg cataggtaag agcagatcct 5700
tgttgctttc tccaatttcc cttgcacgta gctctaacat cttgcatata gacaacgact 5760
gtctcagtct aagccagaaa atcatcgaag tcgcagctgt gcggttagat aaacttgaga 5820
gatatgaaag cgatgtcgaa aattctaagc ttcaacaata taccatcgag tactacatga 5880
ttcgtgccca cttggtatgg tctacccgtc tgtaataata cacatcagac tgacagctgg 5940
gacctaagta ggcctggctg cagggaagac tcgacatcgc agaacacttg ttctcgaaga 6000
taccagtatc tgataatggc aggggtcaag aacgtgtcat ggacatatgc tataagatcg 6060
gtaactgtgc gatttcacac aagcagtatg atgtctctat gaagtggcta gaaagagcgt 6120
tgagggcatg tgagtccatt aggcatatgc aacaggcatc gatactgtca aacaaggata 6180
aagagctctt gatacttcat gcttctggta gggtgctcct ggttgatgac aaagttaagt 6240
ttgttcacaa agaatagttc gtgccggcct tcatcttgat cctgaagagc acagtggctt 6300
cctttctgaa gctctggatg cattgaaatt cgtaagtctt gatatccagt tgttatatat 6360
tgctaatatt taacagcgtt acggtggcat gttccctgtc caggtcatcc aacttgagat 6420
gctggacaag gaaggagcag atgagattgt cttttcgcaa ggtgactgaa ttatagttcg 6480
tgattgtttt ccctcttcga ctgacataag agttaacagt gctacaaagt accattgaat 6540
cgcctgagct taaagactca cacctcgcaa tgtaatggcc aatatgaact cgtgtacgcc 6600
gtccggtact aacaaagtgg gtgtagcatc atgtattata tacagaagct gtttaataca 6660
tcgtgagcgc accggtcaca tctgtctgct catctgacaa gtaaccagtc ccgaggtctc 6720
catcagtatg ctcaagcaac 6740
<210> 15
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 15
aagaaaccca gacgatgttc 20
<210> 16
<211> 20
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 16
<210> 17
<211> 5388
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 17
taaaatccgc cgcctccacc atttgtagaa aaatgtgacg aactcgtgag ctctgtacag 60
tgaccggtga ctctttctgg catgcggaga gacggacgga cgcagagaga agggctgagt 120
aataagccac tggccagaca gctctggcgg ctctgaggtg cagtggatga ttattaatcc 180
gggaccggcc gcccctccgc cccgaagtgg aaaggctggt gtgcccctcg ttgaccaaga 240
atctattgca tcatcggaga atatggagct tcatcgaatc accggcagta agcgaaggag 300
aatgtgaagc caggggtgta tagccgtcgg cgaaatagca tgccattaac ctaggtacag 360
aagtccaatt gcttccgatc tggtaaaaga ttcacgagat agtaccttct ccgaagtagg 420
tagagcgagt acccggcgcg taagctccct aattggccca tccggcatct gtagggcgtc 480
caaatatcgt gcctctcctg ctttgcccgg tgtatgaaac cggaaaggcc gctcaggagc 540
tggccagcgg cgcagaccgg gaacacaagc tggcagtcga cccatccggt gctctgcact 600
cgacctgctg aggtccctca gtccctggta ggcagctttg ccccgtctgt ccgcccggtg 660
tgtcggcggg gttgacaagg tcgttgcgtc agtccaacat ttgttgccat attttcctgc 720
tctccccacc agctgctctt ttcttttctc tttcttttcc catcttcagt atattcatct 780
tcccatccaa gaacctttat ttcccctaag taagtacttt gctacatcca tactccatcc 840
ttcccatccc ttattccttt gaacctttca gttcgagctt tcccacttca tcgcagcttg 900
actaacagct accccgcttg agcagacatc accatgcctg aactcaccgc gacgtctgtc 960
gagaagtttc tgatcgaaaa gttcgacagc gtctccgacc tgatgcagct ctcggagggc 1020
gaagaatctc gtgctttcag cttcgatgta ggagggcgtg gatatgtcct gcgggtaaat 1080
agctgcgccg atggtttcta caaagatcgt tatgtttatc ggcactttgc atcggccgcg 1140
ctcccgattc cggaagtgct tgacattggg gaattcagcg agagcctgac ctattgcatc 1200
tcccgccgtg cacagggtgt cacgttgcaa gacctgcctg aaaccgaact gcccgctgtt 1260
ctgcagccgg tcgcggaggc catggatgcg atcgctgcgg ccgatcttag ccagacgagc 1320
gggttcggcc cattcggacc gcaaggaatc ggtcaataca ctacatggcg tgatttcata 1380
tgcgcgattg ctgatcccca tgtgtatcac tggcaaactg tgatggacga caccgtcagt 1440
gcgtccgtcg cgcaggctct cgatgagctg atgctttggg ccgaggactg ccccgaagtc 1500
cggcacctcg tgcacgcgga tttcggctcc aacaatgtcc tgacggacaa tggccgcata 1560
acagcggtca ttgactggag cgaggcgatg ttcggggatt cccaatacga ggtcgccaac 1620
atcttcttct ggaggccgtg gttggcttgt atggagcagc agacgcgcta cttcgagcgg 1680
aggcatccgg agcttgcagg atcgccgcgg ctccgggcgt atatgctccg cattggtctt 1740
gaccaactct atcagagctt ggttgacggc aatttcgatg atgcagcttg ggcgcagggt 1800
cgatgcgacg caatcgtccg atccggagcc gggactgtcg ggcgtacaca aatcgcccgc 1860
agaagcgcgg ccgtctggac cgatggctgt gtagaagtac tcgccgatag tggaaaccga 1920
cgccccagca ctcgtccgag ggcaaaggaa tagagtagat gccgaccgcg ggatccactt 1980
aacgttactg aaatcatcaa acagcttgac gaatctggat ataagatcgt tggtgtcgat 2040
gtcagctccg gagttgagac aaatggtgtt caggatctcg ataagatacg ttcatttgtc 2100
caagcagcaa agagtgcctt ctagtgattt aatagctcca tgtcaacaag aataaaacgc 2160
gttttcgggt ttacctcttc cagatacagc tcatctgcaa tgcattaatg cattgactgc 2220
aacctagtaa cgccttncag gctccggcga agagaagaat agcttagcag agctattttc 2280
attttcggga gacgagatca agcagatcaa cggtcgtcaa gagacctacg agactgagga 2340
atccgctctt ggctccacgc gactatatat ttgtctctaa ttgtactttg acatgctcct 2400
cttctttact ctgatagctt gactatgaaa attccgtcac cagcncctgg gttcgcaaag 2460
ataattgcat gtttcttcct tgaactctca agcctacagg acacacattc atcgtaggta 2520
taaacctcga aatcanttcc tactaagatg gtatacaata gtaaccatgc atggttgcct 2580
agtgaatgct ccgtaacacc caatacgccg gccgaaactt ttttacaact ctcctatgag 2640
tcgtttaccc agaatgcaca ggtacacttg tttagaggta atccttcttt ctagaagtcc 2700
tcgtgtactg tgtaagcgcc cactccacat ctccactcga cctgcaggca tgcaagcttg 2760
gcactggccg tcgttttaca acgtcgtgac tgggaaaacc ctggcgttac ccaacttaat 2820
cgccttgcag cacatccccc tttcgccagc tggcgtaata gcgaagaggc ccgcaccgat 2880
cgcccttccc aacagttgcg cagcctgaat ggcgaatggc gcctgatgcg gtattttctc 2940
cttacgcatc tgtgcggtat ttcacaccgc atatggtgca ctctcagtac aatctgctct 3000
gatgccgcat agttaagcca gccccgacac ccgccaacac ccgctgacgc gccctgacgg 3060
gcttgtctgc tcccggcatc cgcttacaga caagctgtga ccgtctccgg gagctgcatg 3120
tgtcagaggt tttcaccgtc atcaccgaaa cgcgcgagac gaaagggcct cgtgatacgc 3180
ctatttttat aggttaatgt catgataata atggtttctt agacgtcagg tggcactttt 3240
cggggaaatg tgcgcggaac ccctatttgt ttatttttct aaatacattc aaatatgtat 3300
ccgctcatga gacaataacc ctgataaatg cttcaataat attgaaaaag gaagagtatg 3360
agtattcaac atttccgtgt cgcccttatt cccttttttg cggcattttg ccttcctgtt 3420
tttgctcacc cagaaacgct ggtgaaagta aaagatgctg aagatcagtt gggtgcacga 3480
gtgggttaca tcgaactgga tctcaacagc ggtaagatcc ttgagagttt tcgccccgaa 3540
gaacgttttc caatgatgag cacttttaaa gttctgctat gtggcgcggt attatcccgt 3600
attgacgccg ggcaagagca actcggtcgc cgcatacact attctcagaa tgacttggtt 3660
gagtactcac cagtcacaga aaagcatctt acggatggca tgacagtaag agaattatgc 3720
agtgctgcca taaccatgag tgataacact gcggccaact tacttctgac aacgatcgga 3780
ggaccgaagg agctaaccgc ttttttgcac aacatggggg atcatgtaac tcgccttgat 3840
cgttgggaac cggagctgaa tgaagccata ccaaacgacg agcgtgacac cacgatgcct 3900
gtagcaatgg caacaacgtt gcgcaaacta ttaactggcg aactacttac tctagcttcc 3960
cggcaacaat taatagactg gatggaggcg gataaagttg caggaccact tctgcgctcg 4020
gcccttccgg ctggctggtt tattgctgat aaatctggag ccggtgagcg tgggtctcgc 4080
ggtatcattg cagcactggg gccagatggt aagccctccc gtatcgtagt tatctacacg 4140
acggggagtc aggcaactat ggatgaacga aatagacaga tcgctgagat aggtgcctca 4200
ctgattaagc attggtaact gtcagaccaa gtttactcat atatacttta gattgattta 4260
aaacttcatt tttaatttaa aaggatctag gtgaagatcc tttttgataa tctcatgacc 4320
aaaatccctt aacgtgagtt ttcgttccac tgagcgtcag accccgtaga aaagatcaaa 4380
ggatcttctt gagatccttt ttttctgcgc gtaatctgct gcttgcaaac aaaaaaacca 4440
ccgctaccag cggtggtttg tttgccggat caagagctac caactctttt tccgaaggta 4500
actggcttca gcagagcgca gataccaaat actgtccttc tagtgtagcc gtagttaggc 4560
caccacttca agaactctgt agcaccgcct acatacctcg ctctgctaat cctgttacca 4620
gtggctgctg ccagtggcga taagtcgtgt cttaccgggt tggactcaag acgatagtta 4680
ccggataagg cgcagcggtc gggctgaacg gggggttcgt gcacacagcc cagcttggag 4740
cgaacgacct acaccgaact gagataccta cagcgtgagc tatgagaaag cgccacgctt 4800
cccgaaggga gaaaggcgga caggtatccg gtaagcggca gggtcggaac aggagagcgc 4860
acgagggagc ttccaggggg aaacgcctgg tatctttata gtcctgtcgg gtttcgccac 4920
ctctgacttg agcgtcgatt tttgtgatgc tcgtcagggg ggcggagcct atggaaaaac 4980
gccagcaacg cggccttttt acggttcctg gccttttgct ggccttttgc tcacatgttc 5040
tttcctgcgt tatcccctga ttctgtggat aaccgtatta ccgcctttga gtgagctgat 5100
accgctcgcc gcagccgaac gaccgagcgc agcgagtcag tgagcgagga agcggaagag 5160
cgcccaatac gcaaaccgcc tctccccgcg cgttggccga ttcattaatg cagctggcac 5220
gacaggtttc ccgactggaa agcgggcagt gagcgcaacg caattaatgt gagttagctc 5280
actcattagg caccccaggc tttacacttt atgcttccgg ctcgtatgtt gtgtggaatt 5340
gtgagcggat aacaatttca cacaggaaac agctatgacc atgattac 5388
Claims (10)
1. A recombinant Aspergillus niger genetically engineered bacterium is characterized in that iron acquisition regulatory gene in the recombinant Aspergillus niger genetically engineered bacterium is inactivated.
2. The recombinant Aspergillus Niger genetically engineered bacterium of claim 1, wherein the Aspergillus Niger genetically engineered bacterium is Aspergillus Niger ATCC 12846.
3. The recombinant aspergillus niger genetically engineered bacterium of claim 1, wherein the nucleotide sequence of the inactivated iron acquisition regulatory gene is shown as SEQ ID No. 2.
4. The method for constructing the recombinant aspergillus niger genetically engineered bacterium as claimed in any one of claims 1 to 3, characterized by comprising the following steps:
(1) amplifying to obtain an upstream homology arm and a downstream homology arm of an iron acquisition regulatory gene by taking the genome DNA of the Aspergillus niger genetic engineering bacteria as a template;
(2) amplifying to obtain a hygromycin resistance gene by taking a plasmid PAN7-1 as a template;
(3) amplifying to obtain gene knockout fragments by taking the upstream homology arm and the downstream homology arm of the iron acquisition regulatory gene obtained in the step (1) and the hygromycin resistance gene obtained in the step (2) as templates;
(4) and (4) introducing the gene knockout fragment obtained in the step (3) into an Aspergillus niger protoplast for homologous recombination to obtain AcuM inactivated recombinant Aspergillus niger genetically engineered bacterium.
5. The use of the recombinant A.niger genetically engineered bacterium of any of claims 1-3 in the fermentative preparation of citric acid.
6. Use according to claim 5, wherein the fermentation is an immobilized fermentation.
7. The use according to claim 6, wherein the immobilization medium of the immobilized fermentation is polyurethane; preferably, the content of the immobilization medium is 0.1-5g/L of fermentation medium.
8. The use according to claim 6, wherein the immobilization medium of the immobilized fermentation is pretreated sequentially with NaOH and HCl.
9. The use of claim 5, wherein the fermentation medium is corn meal obtained by enzymatic hydrolysis with a liquefying enzyme, or a fermentation medium prepared from bran extract.
10. Use according to claim 5, wherein the temperature of the fermentation is 30-37 ℃.
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CN113817616A (en) * | 2021-09-22 | 2021-12-21 | 南京工业大学 | Aspergillus niger genetically engineered bacterium with chitin synthase transcriptional regulation gene MedA inactivated and application thereof |
CN114292761A (en) * | 2021-12-02 | 2022-04-08 | 南京工业大学 | Aspergillus niger genetically engineered bacterium and construction method and application thereof |
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CN111088173A (en) * | 2019-12-26 | 2020-05-01 | 南京高新工大生物技术研究院有限公司 | Aspergillus niger genetically engineered bacterium and construction method and application thereof |
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GANG XIE ET AL.,: ""Comparison of citric acid production by Aspergillus niger ATCC 9029 and ATCC 12846 on corn distillers’grains with solubles"", 《JOURNAL OF MICROBIOLOGY》 * |
HONG LIU ET AL.,: ""Aspergillus fumigatus AcuM regulates both iron acquisition and gluconeogenesis"", 《MOLECULAR MICROBIOLOGY》 * |
匿名: ""GenBank: AM270007.1: 27749..33827"", 《GENBANK》 * |
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Cited By (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN113817616A (en) * | 2021-09-22 | 2021-12-21 | 南京工业大学 | Aspergillus niger genetically engineered bacterium with chitin synthase transcriptional regulation gene MedA inactivated and application thereof |
CN113817616B (en) * | 2021-09-22 | 2023-05-09 | 南京工业大学 | Aspergillus niger genetically engineered bacterium with chitin synthase transcription regulation gene MedA inactivated and application thereof |
CN114292761A (en) * | 2021-12-02 | 2022-04-08 | 南京工业大学 | Aspergillus niger genetically engineered bacterium and construction method and application thereof |
CN114292761B (en) * | 2021-12-02 | 2023-11-03 | 南京工业大学 | Aspergillus niger genetically engineered bacterium, construction method and application |
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