CN111925439A - Method for rapidly screening new coronavirus RBD (radial basis function) specific fully human neutralizing monoclonal antibody - Google Patents
Method for rapidly screening new coronavirus RBD (radial basis function) specific fully human neutralizing monoclonal antibody Download PDFInfo
- Publication number
- CN111925439A CN111925439A CN202010839232.1A CN202010839232A CN111925439A CN 111925439 A CN111925439 A CN 111925439A CN 202010839232 A CN202010839232 A CN 202010839232A CN 111925439 A CN111925439 A CN 111925439A
- Authority
- CN
- China
- Prior art keywords
- rbd
- antibody
- monoclonal antibody
- specific
- variable region
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 230000003472 neutralizing effect Effects 0.000 title claims abstract description 31
- 238000012216 screening Methods 0.000 title claims abstract description 31
- 238000000034 method Methods 0.000 title claims abstract description 27
- 241000711573 Coronaviridae Species 0.000 title claims abstract description 15
- 210000004027 cell Anatomy 0.000 claims abstract description 48
- 239000006228 supernatant Substances 0.000 claims abstract description 36
- 210000001806 memory b lymphocyte Anatomy 0.000 claims abstract description 35
- 230000014509 gene expression Effects 0.000 claims abstract description 23
- 239000002299 complementary DNA Substances 0.000 claims abstract description 13
- 230000003321 amplification Effects 0.000 claims abstract description 11
- 238000003199 nucleic acid amplification method Methods 0.000 claims abstract description 11
- 102000053723 Angiotensin-converting enzyme 2 Human genes 0.000 claims abstract description 9
- 108090000975 Angiotensin-converting enzyme 2 Proteins 0.000 claims abstract description 9
- 238000007857 nested PCR Methods 0.000 claims abstract description 8
- 238000003757 reverse transcription PCR Methods 0.000 claims abstract description 8
- 241001112090 Pseudovirus Species 0.000 claims abstract description 7
- 206010035664 Pneumonia Diseases 0.000 claims abstract description 6
- 230000000694 effects Effects 0.000 claims abstract description 6
- 210000005259 peripheral blood Anatomy 0.000 claims abstract description 5
- 239000011886 peripheral blood Substances 0.000 claims abstract description 5
- 230000002463 transducing effect Effects 0.000 claims abstract description 3
- 102100024222 B-lymphocyte antigen CD19 Human genes 0.000 claims description 10
- 101000980825 Homo sapiens B-lymphocyte antigen CD19 Proteins 0.000 claims description 10
- 210000003819 peripheral blood mononuclear cell Anatomy 0.000 claims description 10
- 108020004999 messenger RNA Proteins 0.000 claims description 8
- 238000010186 staining Methods 0.000 claims description 8
- 210000004962 mammalian cell Anatomy 0.000 claims description 3
- 230000000903 blocking effect Effects 0.000 abstract description 15
- 238000002965 ELISA Methods 0.000 abstract description 9
- 238000006243 chemical reaction Methods 0.000 description 16
- 239000003153 chemical reaction reagent Substances 0.000 description 15
- 238000005406 washing Methods 0.000 description 15
- 239000004005 microsphere Substances 0.000 description 13
- UQLDLKMNUJERMK-UHFFFAOYSA-L di(octadecanoyloxy)lead Chemical compound [Pb+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O UQLDLKMNUJERMK-UHFFFAOYSA-L 0.000 description 12
- 239000000243 solution Substances 0.000 description 11
- 239000000203 mixture Substances 0.000 description 10
- 239000000872 buffer Substances 0.000 description 9
- 239000000523 sample Substances 0.000 description 9
- 238000011895 specific detection Methods 0.000 description 9
- XZKIHKMTEMTJQX-UHFFFAOYSA-N 4-Nitrophenyl Phosphate Chemical compound OP(O)(=O)OC1=CC=C([N+]([O-])=O)C=C1 XZKIHKMTEMTJQX-UHFFFAOYSA-N 0.000 description 7
- 238000012408 PCR amplification Methods 0.000 description 7
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 6
- 241000700605 Viruses Species 0.000 description 6
- 238000010790 dilution Methods 0.000 description 6
- 239000012895 dilution Substances 0.000 description 6
- 238000002360 preparation method Methods 0.000 description 6
- 108090000623 proteins and genes Proteins 0.000 description 6
- 238000010839 reverse transcription Methods 0.000 description 6
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Chemical compound O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 6
- 238000000137 annealing Methods 0.000 description 5
- 238000004925 denaturation Methods 0.000 description 5
- 230000036425 denaturation Effects 0.000 description 5
- 238000000684 flow cytometry Methods 0.000 description 5
- 238000011534 incubation Methods 0.000 description 5
- 238000012257 pre-denaturation Methods 0.000 description 5
- 241001678559 COVID-19 virus Species 0.000 description 4
- 229920001213 Polysorbate 20 Polymers 0.000 description 4
- 239000000427 antigen Substances 0.000 description 4
- 102000036639 antigens Human genes 0.000 description 4
- 108091007433 antigens Proteins 0.000 description 4
- 210000003719 b-lymphocyte Anatomy 0.000 description 4
- 238000001514 detection method Methods 0.000 description 4
- 238000002474 experimental method Methods 0.000 description 4
- 238000009472 formulation Methods 0.000 description 4
- 239000002609 medium Substances 0.000 description 4
- 229920000642 polymer Polymers 0.000 description 4
- 235000010486 polyoxyethylene sorbitan monolaurate Nutrition 0.000 description 4
- 239000000256 polyoxyethylene sorbitan monolaurate Substances 0.000 description 4
- 239000000126 substance Substances 0.000 description 4
- 102000000844 Cell Surface Receptors Human genes 0.000 description 3
- 108010001857 Cell Surface Receptors Proteins 0.000 description 3
- 238000000246 agarose gel electrophoresis Methods 0.000 description 3
- 239000011324 bead Substances 0.000 description 3
- 230000006870 function Effects 0.000 description 3
- 230000028996 humoral immune response Effects 0.000 description 3
- 238000002156 mixing Methods 0.000 description 3
- 238000006386 neutralization reaction Methods 0.000 description 3
- 210000004180 plasmocyte Anatomy 0.000 description 3
- 239000000047 product Substances 0.000 description 3
- 102000005962 receptors Human genes 0.000 description 3
- 108020003175 receptors Proteins 0.000 description 3
- 241000283707 Capra Species 0.000 description 2
- 102100031673 Corneodesmosin Human genes 0.000 description 2
- 101710139375 Corneodesmosin Proteins 0.000 description 2
- 229920000209 Hexadimethrine bromide Polymers 0.000 description 2
- 108060001084 Luciferase Proteins 0.000 description 2
- 239000005089 Luciferase Substances 0.000 description 2
- KDXKERNSBIXSRK-UHFFFAOYSA-N Lysine Natural products NCCCCC(N)C(O)=O KDXKERNSBIXSRK-UHFFFAOYSA-N 0.000 description 2
- 239000004472 Lysine Substances 0.000 description 2
- 238000004458 analytical method Methods 0.000 description 2
- 239000002771 cell marker Substances 0.000 description 2
- 238000010586 diagram Methods 0.000 description 2
- 239000012154 double-distilled water Substances 0.000 description 2
- 239000003814 drug Substances 0.000 description 2
- 229940079593 drug Drugs 0.000 description 2
- 230000004907 flux Effects 0.000 description 2
- 239000012634 fragment Substances 0.000 description 2
- 208000015181 infectious disease Diseases 0.000 description 2
- 238000002372 labelling Methods 0.000 description 2
- 239000007788 liquid Substances 0.000 description 2
- 239000003550 marker Substances 0.000 description 2
- 239000013642 negative control Substances 0.000 description 2
- 244000052769 pathogen Species 0.000 description 2
- 239000000843 powder Substances 0.000 description 2
- 238000004321 preservation Methods 0.000 description 2
- 238000007789 sealing Methods 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 239000003053 toxin Substances 0.000 description 2
- 231100000765 toxin Toxicity 0.000 description 2
- 239000011534 wash buffer Substances 0.000 description 2
- KZKAYEGOIJEWQB-UHFFFAOYSA-N 1,3-dibromopropane;n,n,n',n'-tetramethylhexane-1,6-diamine Chemical compound BrCCCBr.CN(C)CCCCCCN(C)C KZKAYEGOIJEWQB-UHFFFAOYSA-N 0.000 description 1
- 208000025721 COVID-19 Diseases 0.000 description 1
- QXNVGIXVLWOKEQ-UHFFFAOYSA-N Disodium Chemical compound [Na][Na] QXNVGIXVLWOKEQ-UHFFFAOYSA-N 0.000 description 1
- 101100532034 Drosophila melanogaster RTase gene Proteins 0.000 description 1
- 101710091045 Envelope protein Proteins 0.000 description 1
- 101710204837 Envelope small membrane protein Proteins 0.000 description 1
- 108700039691 Genetic Promoter Regions Proteins 0.000 description 1
- 101710145006 Lysis protein Proteins 0.000 description 1
- 101710085938 Matrix protein Proteins 0.000 description 1
- 108010052285 Membrane Proteins Proteins 0.000 description 1
- 102000018697 Membrane Proteins Human genes 0.000 description 1
- 101710127721 Membrane protein Proteins 0.000 description 1
- 108090001074 Nucleocapsid Proteins Proteins 0.000 description 1
- 101710141454 Nucleoprotein Proteins 0.000 description 1
- 229910019142 PO4 Inorganic materials 0.000 description 1
- 229940096437 Protein S Drugs 0.000 description 1
- 101710188315 Protein X Proteins 0.000 description 1
- 108091005634 SARS-CoV-2 receptor-binding domains Proteins 0.000 description 1
- VMHLLURERBWHNL-UHFFFAOYSA-M Sodium acetate Chemical compound [Na+].CC([O-])=O VMHLLURERBWHNL-UHFFFAOYSA-M 0.000 description 1
- 101710198474 Spike protein Proteins 0.000 description 1
- 101710172711 Structural protein Proteins 0.000 description 1
- 102100021696 Syncytin-1 Human genes 0.000 description 1
- 150000001412 amines Chemical class 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 238000007664 blowing Methods 0.000 description 1
- 238000005119 centrifugation Methods 0.000 description 1
- 239000012295 chemical reaction liquid Substances 0.000 description 1
- 238000011097 chromatography purification Methods 0.000 description 1
- 238000004140 cleaning Methods 0.000 description 1
- 238000010276 construction Methods 0.000 description 1
- HAAZLUGHYHWQIW-KVQBGUIXSA-N dGTP Chemical compound C1=NC=2C(=O)NC(N)=NC=2N1[C@H]1C[C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)O1 HAAZLUGHYHWQIW-KVQBGUIXSA-N 0.000 description 1
- 238000011161 development Methods 0.000 description 1
- 238000005516 engineering process Methods 0.000 description 1
- 238000001976 enzyme digestion Methods 0.000 description 1
- 238000012869 ethanol precipitation Methods 0.000 description 1
- 239000013604 expression vector Substances 0.000 description 1
- 238000007710 freezing Methods 0.000 description 1
- 230000008014 freezing Effects 0.000 description 1
- 239000012737 fresh medium Substances 0.000 description 1
- 230000004927 fusion Effects 0.000 description 1
- 239000000499 gel Substances 0.000 description 1
- 238000001502 gel electrophoresis Methods 0.000 description 1
- 238000003306 harvesting Methods 0.000 description 1
- 229950007870 hexadimethrine bromide Drugs 0.000 description 1
- 230000004727 humoral immunity Effects 0.000 description 1
- 238000003384 imaging method Methods 0.000 description 1
- 230000028993 immune response Effects 0.000 description 1
- 230000009545 invasion Effects 0.000 description 1
- 238000010841 mRNA extraction Methods 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 230000010355 oscillation Effects 0.000 description 1
- 230000001717 pathogenic effect Effects 0.000 description 1
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 1
- 239000010452 phosphate Substances 0.000 description 1
- 238000007747 plating Methods 0.000 description 1
- 238000003752 polymerase chain reaction Methods 0.000 description 1
- 229920000136 polysorbate Polymers 0.000 description 1
- 239000011148 porous material Substances 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 238000000746 purification Methods 0.000 description 1
- 239000011541 reaction mixture Substances 0.000 description 1
- 238000011084 recovery Methods 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 238000012827 research and development Methods 0.000 description 1
- 230000004044 response Effects 0.000 description 1
- 239000003161 ribonuclease inhibitor Substances 0.000 description 1
- 235000017281 sodium acetate Nutrition 0.000 description 1
- 239000001632 sodium acetate Substances 0.000 description 1
- 239000008223 sterile water Substances 0.000 description 1
- 239000011550 stock solution Substances 0.000 description 1
- 239000000758 substrate Substances 0.000 description 1
- 239000013595 supernatant sample Substances 0.000 description 1
- 239000000725 suspension Substances 0.000 description 1
- 238000012360 testing method Methods 0.000 description 1
- 238000001890 transfection Methods 0.000 description 1
- 239000012096 transfection reagent Substances 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- 230000010474 transient expression Effects 0.000 description 1
- 229960005486 vaccine Drugs 0.000 description 1
Images
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
- C07K16/08—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses
- C07K16/10—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from viruses from RNA viruses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/50—Immunoglobulins specific features characterized by immunoglobulin fragments
- C07K2317/56—Immunoglobulins specific features characterized by immunoglobulin fragments variable (Fv) region, i.e. VH and/or VL
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2317/00—Immunoglobulins specific features
- C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
- C07K2317/76—Antagonist effect on antigen, e.g. neutralization or inhibition of binding
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Biophysics (AREA)
- Biomedical Technology (AREA)
- General Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Virology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Health & Medical Sciences (AREA)
- Wood Science & Technology (AREA)
- Zoology (AREA)
- Biotechnology (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Physics & Mathematics (AREA)
- Plant Pathology (AREA)
- Immunology (AREA)
- Medicinal Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Peptides Or Proteins (AREA)
- Preparation Of Compounds By Using Micro-Organisms (AREA)
Abstract
The invention belongs to the technical field of monoclone, and particularly discloses a method for rapidly screening a full-human-derived neutralizing monoclonal antibody of new coronavirus RBD specificity, which comprises the following steps: S1-S3, collecting peripheral blood of a patient recovering from the new coronary pneumonia, sorting RBD specific memory B cells, and obtaining antibody variable region cDNA by RT-PCR amplification; s4, amplifying the cDNA of the antibody variable region obtained from S1-S3 by adopting nested PCR, and constructing an antibody variable region gene expression cassette; s5, transducing the antibody variable region gene expression box obtained in S4 into cell expression antibody, collecting supernatant, and screening RBD specific monoclonal antibody; s6, detecting the activity of blocking pseudovirus infected cells by using the RBD specific antibody supernatant obtained in S5, detecting the binding capacity of the RBD and ACE2 blocked by using ELISA, detecting the neutralizing capacity of the monoclonal antibody by using a double method, and screening the RBD specific neutralizing monoclonal antibody. The invention can quickly and efficiently obtain the specific fully humanized neutralizing monoclonal antibody of the new coronavirus RBD.
Description
Technical Field
The invention belongs to the technical field of monoclone, and particularly relates to a method for rapidly screening a full-human neutralizing monoclonal antibody with new coronavirus RBD specificity.
Background
The research finds that: the new coronavirus (SARS-CoV-2) has four main structural proteins, namely spike protein (S protein), nucleocapsid protein (N protein), membrane protein (M protein) and envelope protein (E protein), wherein the S protein has two subunits of S1 and S2, and a receptor binding site (RBD) is positioned on the S1 subunit, and has the main functions of recognizing a host cell surface receptor and mediating the fusion of SARS-CoV-2 and a host cell.
At present, specific drug-specific treatment is not available for new pathogen COVID-19, and the development of vaccines requires a current day. The plasma of a patient who is cured and discharged recently contains high-concentration specific antigen neutralizing antibodies, and after the plasma is input into the body of the patient, the plasma can neutralize new corona pathogens and mediate effective immune response, so that the plasma in the recovery period is expected to provide an effective treatment means for treating the patient infected with new corona viruses, the death rate is reduced, and the life safety of the patient is guaranteed.
The Chinese invention patent application with the application publication number of CN111303280A discloses a fully human monoclonal antibody with high neutralizing activity against SARS-CoV-2, which is prepared by the following steps: (1) sorting of individually labelled individuals using flow cytometry (CD 3)neg/CD20low/CD19high/CD27high/CD38high) The plasma cell of (a); (2) amplifying the variable region gene of the fully human monoclonal antibody by utilizing reverse transcription-PCR and nested-PCR technologies; (3) constructing a linear expression frame; (4) constructing an expression vector and performing enzyme digestion identification; (5) transient expression of monoclonal antibody and affinity chromatographic purification.
The above patent provides fully human monoclonal antibodies recognizing the non-RBD region of S1, but the fully human monoclonal antibodies obtained in the above patent have limited blocking effect against viruses since invasion of new coronavirus into host cells is bound to ACE2 of host cells through RBD, and the above patent obtains antibody cDNA by labeling plasma cells, which causes limited humoral immune response.
Disclosure of Invention
The invention aims to provide a method for rapidly screening a new coronavirus RBD specific fully human neutralizing monoclonal antibody aiming at an RBD receptor binding site of SARS-CoV-2 and capable of triggering stronger humoral immune response.
In order to achieve the purpose, the technical scheme of the invention is as follows:
the method for rapidly screening the fully human neutralizing monoclonal antibody with the new coronavirus RBD specificity comprises the following steps:
S1-S3, collecting peripheral blood of a patient with the rehabilitation of the new coronary pneumonia, sorting RBD specific memory B cells, and obtaining antibody variable region cDNA through mRNA of the RBD specific memory B cells;
s4, amplifying the cDNA of the antibody variable region obtained from S1-S3 by adopting nested PCR, and constructing an antibody variable region gene expression cassette;
s5, transducing the antibody variable region gene expression box obtained in S4 into cell expression antibody, collecting supernatant, and screening RBD specific monoclonal antibody;
s6, detecting the RBD specific antibody supernatant obtained in S5 to block the activity of pseudovirus infected cells, detecting the RBD and ACE2 binding capacity of the supernatant, detecting the neutralizing capacity of the monoclonal antibody by a double method, and screening the RBD specific neutralizing monoclonal antibody.
Preferably, S2, first removing Dead cells of PBMC obtained from S1 by Dead cell removal Dye (Dead Dye), then using CD19, mIgG, mIgD and S-RBD to stain the PBMC with a memory B cell stain marker which is specific to the living RBD and has high binding capacity, and screening the memory B cells specific to the RBD; s3, obtaining the antibody variable region cDNA by RT-PCR amplification. The method can accurately screen the memory B cells with RBD specificity and high binding capacity by a simple labeling method, and has the advantages of high flux, rapidness, simplicity and convenience.
Preferably, in S5, the antibody variable region gene expression cassette obtained in S4 is transduced into mammalian cells to express the antibody for 48 hours and the supernatant is collected, coated with RBD using 384-well plates, and the supernatant is examined to screen for monoclonal antibodies specific to RBD. The invention can screen the RBD specific monoclonal antibody and has the advantages of high flux, rapidness, convenience and the like.
Preferably, in S4, the antibody variable region cDNA obtained from S1-S3 is amplified by nested PCR, and then an antibody variable region gene expression cassette is constructed. The technical scheme has high amplification accuracy.
The principle and the beneficial effects of the invention are as follows:
(1) the monoclonal antibody prepared by the screening method has RBD specificity, has virus blocking effect compared with a monoclonal antibody aiming at an S1 non-RBD region, has a larger chance of screening a neutralizing antibody, and provides wider application values for screening antibody medicines, diagnosing, preventing and treating new coronary pneumonia.
(2) The monoclonal antibody prepared by the screening method is obtained by sorting RBD specific memory B cells, but compared with plasma cells, the memory B cells react quickly after being activated in humoral immunity, so that the memory B cells can initiate a humoral immune response which is faster and stronger than an initial response.
In addition, the invention only aims at RBD specific memory B cells to carry out subsequent RT-PCR, nested PCR and antibody function analysis, greatly improves the screening efficiency, shortens the research and development period of monoclonal antibodies, and particularly shortens the workload and the working time after screening the RBD specific memory B cells.
(3) Compared with the screening method in the prior art, the RBD specific memory B cell is obtained by marking, then the mammalian cell is directly transduced by using an antibody gene expression cassette to harvest supernatant within 48 hours, the RBD antigen is coated by a 384-well reaction plate to detect the supernatant, the RBD specific monoclonal antibody is screened, and the neutralizing capacity of the antibody is evaluated by a double method of detecting the capacity of the antibody supernatant for blocking pseudovirus infected cells and detecting the capacity of the antibody for blocking ACE2 and RBD binding, so that the method has the advantages of high throughput, rapidness, simplicity and convenience.
Drawings
FIG. 1 is a diagram of cell sorting by flow cytometry analysis of memory B cells;
FIG. 2 is a diagram of cell sorting by flow cytometry analysis of memory B cells;
FIG. 3 is a gel electrophoresis of the PCR product of the antibody gene of a single cell;
FIG. 4 is a photograph of agarose gel electrophoresis following PCR amplification of an antibody gene expression cassette containing the CMV promoter, WPRE-gamma or WPRE-kappa element;
FIG. 5 is a graph showing the result of RBD-specific detection;
FIG. 6 is a graph showing the result of RBD-specific detection;
FIG. 7 is a graph showing the result of RBD-specific detection;
FIG. 8 is a graph showing the result of RBD-specific detection;
FIG. 9 is a graph showing the result of RBD-specific detection;
FIG. 10 is a graph showing the result of RBD-specific detection;
FIG. 11 is a graph showing the result of RBD-specific detection;
FIG. 12 is a graph showing the result of RBD-specific detection;
FIG. 13 is a graph showing the result of RBD-specific detection;
FIG. 14 is a graph showing the results of the detection of the neutralizing ability of an antibody by a pseudovirus infection test;
FIG. 15 is a graph showing the results of the detection of the neutralizing ability of antibody blocking the binding of RBD to ACE2 by ELISA.
Detailed Description
The technical solutions in the embodiments of the present invention will be clearly and completely described below with reference to the accompanying drawings of the embodiments of the present invention, and it is obvious that the described embodiments are only a part of the embodiments of the present invention, and not all of the embodiments. All other embodiments, which can be derived by a person skilled in the art from the embodiments given herein without making any creative effort, shall fall within the protection scope of the present invention.
The embodiment provides a method for rapidly screening a new coronavirus RBD specific fully humanized neutralizing monoclonal antibody, which comprises the steps of obtaining a single RBD specific memory B cell from peripheral blood of a new coronary pneumonia rehabilitation patient by separation, then obtaining mRNA of the RBD specific memory B cell, then constructing an antibody variable region gene expression box through RT-PCR and nested PCR, then transferring the antibody variable region gene expression box into 293T cell expression antibody and collecting supernatant, detecting the RBD specificity of the supernatant by an ELISA method, and screening to obtain the RBD specific monoclonal antibody; and detecting the activity of blocking pseudovirus infected cells by using the obtained supernatant, detecting the RBD and ACE2 binding capacity of the supernatant by using an ELISA method, detecting the neutralizing capacity of the monoclonal antibody by using a double method, and screening the RBD specific neutralizing monoclonal antibody.
The method specifically comprises the following steps:
s1, collecting peripheral blood of a plurality of patients with the new coronary pneumonia, separating to obtain PBMC, and freezing and storing in a refrigerator at-80 ℃ for later use.
S2, firstly removing Dead cells of PBMC obtained by S1 by using Dead cell Dye (Dead Dye), then adopting CD19, mIg-G, mIg-D and S-RBD to stain and mark the memory B cells with high specificity and binding capacity for the living RBD in the PBMC, and screening out the memory B cells specific to the RBD; specific memory B cells were sorted using a flow cytometric sorter onto 96-well plates, one specific memory B cell per well, and frozen at-80 ℃ in a freezer for use.
Specifically, the preferred concentration range of the Dead Dye staining in this embodiment is 1-2 μ g/mL, and the preferred concentration range of the Dead Dye staining in this embodiment is 1.5 μ g/mL; CD19 is a B cell marker produced by Biolegend and is stained at a concentration ranging from 1 to 2. mu.g/mL, preferably at a concentration of 1.5. mu.g/mL for CD19 in this example. mIg-G is a B cell surface receptor produced by Biolegend, and the concentration range of the mIg-G during staining is 1-2 mu G/mL, and the concentration of the mIg-G during staining is 1.5 mu G/mL in the embodiment; mIg-D is B cell surface receptor produced by Biolegend, and the concentration range when staining is 1-2 μ g/mL, and the concentration when staining mIg-D is 1.5 μ g/mL is preferred in the embodiment; S-RBD is a novel coronavirus produced by sinobiological, is a protein receptor domain, and is stained at a concentration ranging from 1 to 2. mu.g/mL, and the concentration of S-RBD staining is preferably 1.5. mu.g/mL in this example.
Cell sorting of PBMC by CD19, mIg-G, mIg-D and S-RBD for RBD-specific memory B cells by flow cytometry cell sorting of PBMC with S-RBD-specific memory B cells cell sorting profiles are shown in FIGS. 1 and 2, where Batch ID 0428, 0505, 0522, 0528 in FIG. 2 are screening batches. The principle of screening RBD-specific memory B cells by CD19, mIg-G, mIg-D and S-RBD in this example is as follows: PBMC were stained with Dead cell stain (Dead Dye), B cell marker CD19, memory B cell markers mIg-G positive and mIg-D negative, and memory B cells expressing RBD-specific IgG, and then a CD19 cell population was divided from the cell population using a flow cytometer, and mIg-G was divided from the CD19 positive cell population+mIg-D-Cell population from mIg-G+mIg-D-Dividing the cell group into RBD positive memory B cells, and sorting the RBD positive memory B cells by a flow cytometry sorter.
S3, sorting to obtain mRNA of single RBD specific memory B cell, and obtaining antibody variable region cDNA by RT-PCR amplification. Specifically, when RT-PCR is used to amplify antibody variable region cDNA, the primer front segment of the primer designed in this example is designed with a universal Leader (see primer sequence listing i and primer sequence listing ii), which effectively improves the amplification rate of antibody gene, and the experimental result is shown in fig. 3.
S4, amplifying the antibody variable region cDNA obtained from S1-S3 by adopting nested PCR, and constructing an antibody variable region gene expression cassette.
S3 and S4 were performed in total by the following six sections: (1) extracting mRNA of RBD specific memory B cells; (2) single cell mRNA Reverse Transcription (RT); (3) adding a G tail (TDT); (4) first round PCR (1st PCR); (5) second round PCR (2nd PCR); (6) BCR-ORF PCR amplification constructs gene expression cassettes; (7) CMV, WPRE-gamma/kappa/l fragment amplification and CMV, BCR-Vgamma/kappa/l ((6) products), WPRE-gamma/kappa/l overlap PCR (overlap PCR) pre-connection; (8) BCR-gamma ORF, BCR-kappa ORF and BCR-lPCR amplification.
The preparation and reaction conditions of each part of reaction liquid are as follows:
(1) using DynabeadsTM mRNA DIRECTTMThe single cell mRNA extraction is carried out by a Purification Kit (Thermo Fisherscientific), and the method specifically comprises the following steps:
centrifuging: taking out the 96-well plate sorted with single RBD specific memory B cells from a refrigerator at-80 ℃, and centrifuging the plate at 600 Xg for 30s to enable the cells to be centrifuged at the bottom of the well;
cleaning: taking out a Dynabeads oligo (dT)25 microsphere bottle, uniformly mixing the Dynabeads oligo (dT)25 microsphere bottle by vortex, sucking enough microspheres according to 2 mu l/hole, placing the microspheres on a magnet block, standing for 30s, discarding supernatant, and resuspending the microspheres by using 500 mu l of lysine Buffer;
preparing: adding the microspheres into a 50mL centrifuge tube according to 9. mu.l/hole lysine Buffer, adding the 500. mu.l microsphere suspension, and uniformly blowing by using a gun;
fourthly, subpackaging: subpackaging the microspheres by using an eight-connecting tube, and then adding the microspheres into a cell plate according to 9 mu l/hole by using a row gun;
moistening and washing: pasting a film on a 96-hole plate, then rinsing the periphery of the tube wall for 2 cycles;
sixthly, incubation: standing at room temperature for 5min to fully release and combine mRNA of the RBD specific memory B cells to the microspheres, and after the incubation is finished, performing 600 Xg instantaneous centrifugation to enable the microspheres to be centrifuged at the bottom of the hole. Place 96-well plates in DynaMagTM-96side Magnet magnetic plate, pipette off supernatant;
seventhly, washing by Wash A: adding Washing Buffer A according to 8 mul/hole, walking the plate back and forth for 7-8 times to fully wash the microspheres, and discarding the supernatant;
and (8) washing with Wash B: wash Buffer B was added at 8. mu.l/well, the plate was walked back and forth 7-8 times to wash the microspheres thoroughly, the supernatant was discarded, and then the pre-prepared Reverse Transcription (RT) reaction was added at 10. mu.l/well. The reagent preparation and reaction conditions are described in the following (2).
(2) Reverse Transcription (RT) (10. mu.l system) and reagents required to be formulated are shown in Table 1 below.
Name of reagent | Volume of |
DEPC-H2O | 4.5μl |
5×primerscript Buffer | 2.0μl |
2.5mM dNTP | 2.0μl |
RNase Inhibitor | 1μl |
Sample | beads |
PrimerScript Ⅱ RTase | 0.5μl |
Total volume | 10μl |
Reaction conditions are as follows: 42 ℃ for 60min (mix every 20 min).
After the reaction was completed, the 96-well plate was instantaneously centrifuged at 600 Xg, and then the 96-well plate was separatedIs placed in DynaMagTMOn a 96-side Magnet magnetic plate, the supernatant was aspirated off by a discharge gun, and then a previously prepared TDT reaction solution was added at 10. mu.l/well, and the reagent preparation and reaction conditions were as described in (3) below.
(3) Add G tail (TDT) (10. mu.l system): the reagents required for formulation are shown in table 2 below.
Name of reagent | Volume of |
H2O | 6.4μl |
5×TdT buffer | 2.0μl |
10mM dGTP | 0.5μl |
0.1%BSA | 1.0μl |
Sample | beads |
TdT | 0.1μl |
Total volume | 10μl |
Reaction conditions are as follows: 37 ℃ for 40min (mix every 20 min).
After the reaction, the reaction mixture was centrifuged at 600 Xg in a 96-well plate and then placed in DynaMagTMOn a 96-side Magnet magnetic plate, the supernatant was aspirated off by a pipette, and then a first PCR (1st PCR) reaction solution prepared in advance was added at 10. mu.l/well, and the reagent preparation and reaction conditions were as described in (4) below.
(4)1st PCR (10. mu.l system) (see primer sequence Listing): the reagents required for formulation are shown in table 3 below.
Name of reagent | Volume of |
H2O | 1.9 |
2×GC Buffer | 5μl |
2.5mM dNTP | 1μl |
FP:AP3-dC(10μM) | 0.5μl |
RP1:Cg-1st(10μM) | 0.5μl |
RP2:Ck-1st(10μM) | 0.5μl |
RP3:CI-RT(10μM) | 0.5μl |
PrimesTAR | 0.1μl |
sample | beads |
Total volume | 10μl |
Based on the PCR principle, the experimental reaction conditions of 1st PCR are as follows: firstly, pre-denaturation is carried out for 3min at 95 ℃; ② denaturation at 95 ℃ for 15sec, annealing at 60 ℃ for 5sec, extension at 72 ℃ for 1min, 30-35cycles, preferably 30cycles in the embodiment; ③ extension for 5min at 72 ℃ and preservation at 4 ℃.
(5) Second round PCR (2nd PCR) (10. mu.l system) (see primer sequence Listing one and primer sequence Listing two): the reagents required for formulation are shown in table 4 below.
Name of reagent | Volume of |
H2O | 1.5 |
2×GC Buffer | 5μl |
2.5mM dNTP | 1μl |
FP:MAC-AP3/AP3(10μM) | 0.5μl |
RP:Cg-nest/K20/CI-nest(10μM) | 0.5μl |
PrimesTAR | 0.5μl |
sample | 1μl |
Total volume | 10μl |
Based on the PCR principle, the experimental reaction conditions of 2nd PCR are as follows: firstly, pre-denaturation is carried out for 3min at 95 ℃; ② denaturation at 95 ℃ for 15sec, annealing at 60 ℃ for 5s, extension at 72 ℃ for 1min, 30-35cycles, preferably 35cycles in the embodiment; extending for 5min at 72 deg.C, and storing at 4 deg.C.
After the PCR is finished: mu.l of each well was subjected to 1.5% agarose gel electrophoresis. The cell pore paired with the Gamma chain and Kappa chain or Lamada chain was sequenced.
(6) Amplification and construction of antibody expression cassette (BCR-ORF): PCR amplification promoter region (CMV promoter), WPRE-gamma (antibody gamma chain) and WPRE-kappa (antibody kappa chain) the PCR amplification system is shown in Table 5 below.
The PCR amplification conditions were: firstly, pre-denaturation is carried out for 3min at 95 ℃; ② denaturation at 95 ℃ for 15sec, annealing at 56 ℃ for 15sec, extension at 72 ℃ for 1min, 30 cycles; ③ extension for 5min at 72 ℃ and preservation at 12 ℃.
(7) CMV, WPRE-gamma/kappa/l fragment amplification and CMV, BCR-Vgamma/kappa/l, WPRE-gamma/kappa/l overlap PCR (overlap PCR) pre-ligation: the experimental system is shown in table 6 below.
The PCR amplification conditions were: pre-denaturation at 95 ℃ for 3 min; denaturation at 95 ℃ for 15sec, annealing at 50 ℃ for 15sec, extension at 72 ℃ for 1.5min, 10 cycles; extending for 5min at 72 deg.C, and storing at 12 deg.C.
(8) BCR-gamma ORF, BCR-kappa ORF and BCR-l PCR amplification: the experimental system is shown in table 7 below.
PCR amplification procedure: pre-denaturation at 95 ℃ for 3 min; denaturation at 95 ℃ for 15sec, annealing at 58 ℃ for 15sec, extension at 72 ℃ for 1.5min, 30 cycles; extending for 5min at 72 deg.C, and storing at 12 deg.C.
After amplification, agarose gel electrophoresis is adopted, whether the size of the obtained antibody variable region gene is correct or not is analyzed by gel imaging, the experimental result is shown in figure 4, the Marker is in the middle position, and the band is in the position of 5000 bp.
BCR-gamma ORF and BCR-kappa/ORF ethanol precipitation: placing 30 μ l of PCR products of BCR-gamma ORF and BCR-kappa ORF in 8 connecting tubes respectively, adding 120 μ l of anhydrous ethanol and 6 μ l of sodium acetate solution, mixing well, and standing at-80 deg.C for 30 min; 10000rpm, centrifuging for 20min, discarding the supernatant, sequentially rinsing with 200 μ l of 70% ethanol and anhydrous ethanol once respectively, fully volatilizing the ethanol at 56 deg.C, adding 40 μ l of sterile water, oscillating to fully dissolve the precipitate, and detecting the concentration of antibody variable region gene.
The Leader primers used in S3 and S4 are described in the primer sequence Listing I below:
the J-region primers used for S3 and S4 are described in the following primer sequence Listing:
primer ID | sequence |
IGHJ_01 | GATGGGCCCTTGGTGGAGGGTGAGGAGACGGTGACCAGGGTGCCCTGGCCCCAGT |
IGHJ_02 | GATGGGCCCTTGGTGGAGGGTGAGGAGACAGTGACCAGGGTGCCACGGCCCCAGA |
IGHJ_03 | GATGGGCCCTTGGTGGAGGGTGAAGAGACGGTGACCATTGTCCCTTGGCCCCAGA |
IGHJ_04 | GATGGGCCCTTGGTGGAGGGTGAGGAGACGGTGACCGTGGTCCCTTGCCCCCAGA |
IGKJ_01 | GATGGTGCAGCCACAGTTCGTTTGATTTCCACCTTGGTCCCTTGGCCGAACGTCC |
IGKJ_02 | GATGGTGCAGCCACAGTTCGTTTGATTTCCACCTTGGTCCCTTGGCCGAACGTCC |
IGKJ_03 | GATGGTGCAGCCACAGTTCGTTTGATATCCACTTTGGTCCCAGGGCCGAAAGTGA |
IGKJ_04 | GATGGTGCAGCCACAGTTCGTTTGATCTCCACCTTGGTCCCTCCGCCGAAAGTGA |
IGKJ_05 | GATGGTGCAGCCACAGTTCGTTTAATCTCCAGTCGTGTCCCTTGGCCGAAGGTGA |
IGLJ_01 | GGGGCAGCCTTGGGCTGACCTAGGACGGTGACCTTGGTCCCAGTTCCGAAGACAT |
IGLJ_02 | GGGGCAGCCTTGGGCTGACCTAGGACGGTCAGCTTGGTCCCTCCGCCGAATACCA |
IGLJ_03 | GGGGCAGCCTTGGGCTGACCTAAAATGATCAGCTGGGTTCCTCCACCAAATACAA |
IGLJ_04 | GGGGCAGCCTTGGGCTGACCTAGGACGGTCAGCTCGGTCCCCTCACCAAACACCC |
IGLJ_05 | GGGGCAGCCTTGGGCTGACCTAGGACGGTCAGCTCCGTCCCCTCACCAAACACCC |
IGLJ_06 | GGGGCAGCCTTGGGCTGACCGAGGACGGTCACCTTGGTGCCACTGCCGAACACAT |
IGLJ_07 | GGGGCAGCCTTGGGCTGACCGAGGACGGTCAGCTGGGTGCCTCCTCCGAACACAG |
IGLJ_08 | GGGGCAGCCTTGGGCTGACCGAGGGCGGTCAGCTGGGTGCCTCCTCCGAACACAG |
s5, the variable region gene expression cassette of the antibody obtained in S4 is transduced into 293T cells to express the antibody within 48 hours, the supernatant is collected, the RBD specificity of the supernatant is detected by an ELISA method, and RBD specific fully human monoclonal antibodies are screened (the screened RBD specific fully human monoclonal antibodies are shown in figures 5-13).
(A) Antigen was diluted with PBS (final concentration 2. mu.g/mL), 10. mu.l/well, and coated onto 384-well ELISA plates overnight at 4 ℃ or 2h at 37 ℃ (4 ℃ overnight is preferred in this example). NOTE: after the addition, the liquid is instantly centrifuged to ensure that the liquid is at the bottom.
The experimental system is shown in table 8 below:
name of reagent | Goods number | Original concentration | Final concentration | Dilution ratio |
SARS-COV-2RBD | Cat:40592-V08H | 200μg/mL | 2μg/mL | 1:100 |
Goat pab to Hu IgG-ALP | Cat:ab97221 | 1mg/mL | 2μg/mL | 1:500 |
(B) Formulation of PBST (0.05% Tween 20, Cat # TB 220): 1L of PBS was added with 0.5mL of Tween 20;
PBST machine washed plates (Thermoscientific wellwash versa) or hand washed (plates that were machine washed were still manually photographed/centrifuged using a microplate centrifuge (MPC-P25) for 1min to make the plates invisible to water and air bubbles).
And (3) sealing: mu.l of 5% BSA (BioFroxx, Cat. NO:4240GR100) (formulated in PBST) were added to the washed plates and incubated for 1h at 37 ℃ in an incubator. PBST machine washing board or hand washing.
(C) Sample adding and standard substance. Wherein, the standard substance: 10 μ l/well stock concentration 1 μ g/mL, gradient dilutions 250ng/mL, 125ng/mL, 62.5ng/mL, 31.25ng/mL, 15.63ng/mL, 7.81ng/mL, 3.9ng/mL, and 1.95 ng/mL. (blocking solution dilution); sample preparation: cell supernatants transfected with antibody genes. Negative control/blank wells: blocking solution 10. mu.l/well.
Incubate at 37 ℃ for 30 min. PBST machine washing board or hand washing.
(D) Secondary antibody was added at a concentration of 10. mu.l/well, followed by incubation at 37 ℃ for 30min, and the experimental systems are shown in Table 9 below.
Name of secondary antibody | Goods number | Original concentration | Final concentration | Dilution ratio |
goat-anti-human IgG-ALP | A18808 | 1.5mg/ml | 0.3μg/ml | 1:5000 |
Goat pab to Hu IgG-ALP | Ab98532 | 0.5mg/ml | 0.25μg/ml | 1:2000 |
PBST machine washing board or hand washing. Mu.l/well of PNPP (disodium p-nitrophenylphosphate) and OD (450mm) values were measured using (Thermoscientific Muttiskan GO) for 5min, 10min, 15min, 20min, 25min, 30min, 35min, 40min, 45min, 50min, 55min and 60 min. 50mg PNPP powder (Thermo, Prod #34045) +40mL ddH2O +10mL of Diethylhanol amine substrate Buffer (5X), and PNPP was stored at 4 ℃ protected from light. As shown in FIGS. 5 to 13, the results were positive when the OD was greater than 0.1.
The embodiment also comprises S6, and the neutralizing capacity of the RBD specificity supernatant detection antibody obtained from S5 for blocking pseudovirus infection of Vero6 cells or 293T cells (293T cells are preferred in the embodiment) expressed by ACE 2; the ELISA method is used for detecting the capacity of the antibody for blocking the combination of ACE2 and RBD, and the specific experimental steps are as follows:
(a) first day 293T cells were plated: plating was performed with 6-well plates 293T, 1x10^6 cells per well, 2mL of medium. After 24h of culture, the cell density reaches 70-80%.
(b) The following day transfection was performed with X-fect transfection reagent: before use, X-fet polymers and buffers were returned to room temperature, the polymers were protected from light, and the polymers were vortexed for 10 sec. XfectTMThe purchase information of the transformation Reagent is: catalog No.631317, TaKaRa, Japan. The reaction system is shown in table 10 below:
when mix is prepared, firstly adding DNA into a buffer, carrying out vortex oscillation for 5sec, then adding a polymer, oscillating for 10sec, standing at room temperature in a dark place for 10min, and carrying out instant separation for no more than 30 min. The cultured 293T cells were removed and 1mL of the medium was discarded. Mu.l of mix was dropped to the remaining medium. Shake the plate front and back and left and right. After 4h incubation, 2mL of fresh medium was replaced and incubation continued for up to 48 h.
(c) Day three neutralization experiments were plated with 293T-ACE2 cells: using 96-well plates, 2X10^ 4/well were inoculated, 100. mu.l of medium per well.
(d) The fourth day, toxin collecting and neutralization experiments.
Firstly, toxin collection: the supernatant was collected in a 15mL tube, carefully removed from contact with the bottom and from aspiration of the cells, and centrifuged at 300 Xg for 7min to slowly descend. The collected supernatant was filtered through a 0.45 μm filter, and the supernatant was dispensed and stored at-80 ℃ until use.
② neutralization experiment: the RBD-specific fully human monoclonal antibody (hereinafter referred to as antibody) obtained in S5 was incubated with the virus: mu.l of the antibody solution diluted in a gradient manner per well was mixed with 50. mu.l of a virus stock solution (supernatant prepared in (r)), incubated at 37 ℃ for 1 hour, then 5. mu.g/mL of polybrene (hexadimethrine bromide) was added to the mixture of the antibody and the virus, the stock culture solution of 293T-ACE2 was removed, the mixture of the antibody and the virus was added, 3 multiple wells were provided for each set, and luciferase activity was detected after 3 days.
(e) And detecting the luciferase activity at the seventh day.
Taking out Promega Bright-Glo prepared in advance and stored in refrigerator at-80 deg.CTMThe reagent (2) was incubated at room temperature, and 293T-ACE2 cells cultured 0.5h before detection were incubated at room temperature. Promega Bright-GloTMThe purchase information of (2) is: catalog No. E2610, Promega, Madison, Wis., USA.
Resuspend the cells with a rifle, then add 100. mu.l Bright-Glo per wellTMAnd (3) uniformly mixing the reagents, and detecting by using a thermolfisher LUX reader after 2 min.
The neutralizing capacity of antibodies to block RBD binding to ACE2 was tested by ELISA:
(1) the first day antigen was diluted with PBS (final concentration 2. mu.g/mL), 10. mu.l/well, coated onto 384-well ELISA plates overnight at 4 ℃ or 2h at 37 ℃ (4 ℃ overnight preferred). The experimental system is the same as in table 8. NOTE: and (5) instantly centrifuging after the sample is added.
(2) PBST (phosphate tween buffer) was prepared the following day: 0.5mL of Tween 20 was added to 1L of PBS, and the purchase information for 0.05% Tween 20 was: cat # TB 220; PBST machine-washed plates (Thermoscientific wellwash versa) or hand-washed, the machine-washed plates were still manually photographed/centrifuged for 1min using a microplate centrifuge (MPC-P25) to make the plates invisible to water and air bubbles.
And (3) sealing: mu.l of 5% BSA (BioFroxx, Cat. NO:4240GR100) (prepared in PBST) was added to each well and incubated at 37 ℃ for 1 h. PBST machine washing board or hand washing.
(3) Sample adding and standard substance.
And (3) standard substance: 10 μ l/well stock concentration 1 μ g/mL, gradient dilutions 250ng/mL, 125ng/mL, 62.5ng/mL, 31.25ng/mL, 15.63ng/mL, 7.81ng/mL, 3.9ng/mL, 1.95 ng/mL.
Sample preparation: cell supernatant antibodies from multiple samples.
Negative control/blank wells: blocking solution 10. mu.l/well.
(4) The reaction plate to which the cell supernatant was added was incubated at 37 ℃ for 30 min.
(5) PBST machine washing board or hand washing.
(6) Add secondary antibody, 10. mu.l/well. (blocking solution dilution) the experimental system is the same as in Table 9.
(7) The secondary antibody was incubated at 37 ℃ for 30 min.
(8) PBST machine washing board or hand washing.
(9)10 μ l/well PNPP, OD value was measured using (thermal Muttiskan GO) for 5min, 10min, 15min, 20min, 25min, 30min, 35min, 40min, 45min, 50min, 55min, 60 min.
50mg PNPP powder (Thermo, Prod #34045) +40mL ddH2O +10mL Diethanolaminesubstrate Buffer (5X), and PNPP was stored at 4 ℃ protected from light.
The neutralizing antibodies were further screened on the basis of the RBD-specific monoclonal antibodies shown in fig. 5 to fig. 13 (abscissa of the number of monoclonal antibodies), and the experimental results are shown in fig. 14 and fig. 15, and the higher the OD value shows that the antibody supernatant sample has high blocking ability and high neutralizing ability (generally, 85% or more of the blocking ability is considered to be a monoclonal antibody having high neutralizing potential).
The foregoing detailed description of the preferred embodiments of the invention has been presented. It should be understood that numerous modifications and variations could be devised by those skilled in the art in light of the present teachings without departing from the inventive concepts. Therefore, the technical solutions available to those skilled in the art through logic analysis, reasoning and limited experiments based on the prior art according to the concept of the present invention should be within the scope of protection defined by the claims.
Claims (4)
1. The method for rapidly screening the fully human neutralizing monoclonal antibody with the new coronavirus RBD specificity is characterized by comprising the following steps of:
S1-S3, collecting peripheral blood of a patient with the rehabilitation of the new coronary pneumonia, sorting RBD specific memory B cells, and obtaining antibody variable region cDNA through mRNA of the RBD specific memory B cells;
s4, constructing an antibody variable region gene expression cassette;
s5, transducing the antibody variable region gene expression box obtained in S4 into cell expression antibody, collecting supernatant, and screening RBD specific monoclonal antibody;
s6, detecting the RBD specific antibody supernatant obtained in S5 to block the activity of pseudovirus infected cells, detecting the RBD and ACE2 binding capacity of the supernatant, detecting the neutralizing capacity of the monoclonal antibody by a double method, and screening the RBD specific neutralizing monoclonal antibody.
2. The method for rapidly screening the neutralizing monoclonal antibody against the RBD specificity of the neocoronavirus according to claim 1, wherein S2 is performed by removing the Dead cells of PBMC obtained from S1 by Dead cell removal Dye (Dead Dye), and then screening the memory B cells specific to RBD by using the staining markers of the memory B cells with the specificity and high binding capacity of the viable RBD in PBMC by using CD19, mIgG, mIgD and S-RBD; s3, obtaining the antibody variable region cDNA by RT-PCR amplification.
3. The method for rapidly screening the neutralizing monoclonal antibody against the RBD specificity of the novel coronavirus according to claim 1 or 2, wherein the variable region gene expression cassette of the antibody obtained in S4 is transduced into mammalian cells to express the antibody for 48 hours and the supernatant is collected at S5, the RBD is coated using a 384-well plate, and the supernatant is assayed to screen the monoclonal antibody specific to the RBD.
4. The method for rapidly screening the fully human neutralizing monoclonal antibody with the RBD specificity of the novel coronavirus according to claim 1 or 2, wherein the variable region cDNA of the antibody obtained from S1-S3 is amplified by nested PCR in S4, and then an antibody variable region gene expression cassette is constructed.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202010839232.1A CN111925439A (en) | 2020-08-19 | 2020-08-19 | Method for rapidly screening new coronavirus RBD (radial basis function) specific fully human neutralizing monoclonal antibody |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN202010839232.1A CN111925439A (en) | 2020-08-19 | 2020-08-19 | Method for rapidly screening new coronavirus RBD (radial basis function) specific fully human neutralizing monoclonal antibody |
Publications (1)
Publication Number | Publication Date |
---|---|
CN111925439A true CN111925439A (en) | 2020-11-13 |
Family
ID=73304385
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN202010839232.1A Pending CN111925439A (en) | 2020-08-19 | 2020-08-19 | Method for rapidly screening new coronavirus RBD (radial basis function) specific fully human neutralizing monoclonal antibody |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN111925439A (en) |
Cited By (6)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN112661841A (en) * | 2020-12-04 | 2021-04-16 | 广州市第八人民医院 | Fully human monoclonal antibody 17-2 for neutralizing neoepitope of new coronavirus and application thereof |
CN113651884A (en) * | 2021-05-25 | 2021-11-16 | 中国科学院微生物研究所 | Humanized anti-SARS-CoV-2 monoclonal antibody and its application |
WO2022123470A1 (en) * | 2020-12-10 | 2022-06-16 | Reagene Biosciences Pvt. Ltd. | Saliva based diagnostic assays for detection of sarscov2 receptor binding domain (rbd) neutralizing antibodies |
CN115125251A (en) * | 2022-08-22 | 2022-09-30 | 广东忠信生物科技有限公司 | Method for efficiently obtaining specific fully human monoclonal antibody gene and application |
US11732030B2 (en) | 2020-04-02 | 2023-08-22 | Regeneron Pharmaceuticals, Inc. | Anti-SARS-CoV-2-spike glycoprotein antibodies and antigen-binding fragments |
US11999777B2 (en) | 2021-06-02 | 2024-06-04 | Regeneron Pharmaceuticals, Inc. | Methods for treating or preventing SARS-CoV-2 infections and COVID-19 with anti-SARS-CoV-2 spike glycoprotein antibodies |
Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN107164399A (en) * | 2017-07-07 | 2017-09-15 | 江苏省疾病预防控制中心 | A kind of high flux expresses the linear expression cassette of monoclonal antibody |
CN107760690A (en) * | 2017-10-25 | 2018-03-06 | 珠海泰诺麦博生物技术有限公司 | A kind of preparation method and application of high flux human antibody |
RU2723008C1 (en) * | 2020-05-19 | 2020-06-08 | федеральное государственное бюджетное учреждение «Национальный исследовательский центр эпидемиологии и микробиологии имени почетного академика Н.Ф. Гамалеи» Министерства здравоохранения Российской Федерации | Method for producing Chinese hamster ovary cell strain, being a producer of recombinant SARS-CoV-2 virus protein RBD, Chinese hamster ovary cell strain, producer of recombinant SARS-CoV-2 protein RBD, method for producing recombinant SARS-CoV-2 virus protein RBD, test system for enzyme immunoassay of human serum or plasma, and use thereof |
-
2020
- 2020-08-19 CN CN202010839232.1A patent/CN111925439A/en active Pending
Patent Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN107164399A (en) * | 2017-07-07 | 2017-09-15 | 江苏省疾病预防控制中心 | A kind of high flux expresses the linear expression cassette of monoclonal antibody |
CN107760690A (en) * | 2017-10-25 | 2018-03-06 | 珠海泰诺麦博生物技术有限公司 | A kind of preparation method and application of high flux human antibody |
RU2723008C1 (en) * | 2020-05-19 | 2020-06-08 | федеральное государственное бюджетное учреждение «Национальный исследовательский центр эпидемиологии и микробиологии имени почетного академика Н.Ф. Гамалеи» Министерства здравоохранения Российской Федерации | Method for producing Chinese hamster ovary cell strain, being a producer of recombinant SARS-CoV-2 virus protein RBD, Chinese hamster ovary cell strain, producer of recombinant SARS-CoV-2 protein RBD, method for producing recombinant SARS-CoV-2 virus protein RBD, test system for enzyme immunoassay of human serum or plasma, and use thereof |
Non-Patent Citations (6)
Title |
---|
XIANGYU CHEN,ET AL.: "Human monoclonal antibodies block the binding of SARS-CoV-2 spike protein to angiotensin converting enzyme 2 receptor", 《CELLULAR & MOLECULAR IMMUNOLOGY》 * |
ZOST,ET AL.: "Rapid isolation and profiling of a diverse panel of human monoclonal antibodies targeting the SARS-CoV-2 spike protein", 《NAT MED.》 * |
尹明 等: "冠状病毒肺炎的流行趋势", 《中华老年多器官疾病杂志》 * |
张梦雄等: "利用线性表达框高通量表达人源单克隆抗体", 《生物技术通讯》 * |
董志伟 等: "《抗体工程 第2版》", 30 June 2002 * |
迟象阳等: "单个B细胞抗体制备技术及应用", 《生物工程学报》 * |
Cited By (7)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US11732030B2 (en) | 2020-04-02 | 2023-08-22 | Regeneron Pharmaceuticals, Inc. | Anti-SARS-CoV-2-spike glycoprotein antibodies and antigen-binding fragments |
CN112661841A (en) * | 2020-12-04 | 2021-04-16 | 广州市第八人民医院 | Fully human monoclonal antibody 17-2 for neutralizing neoepitope of new coronavirus and application thereof |
WO2022123470A1 (en) * | 2020-12-10 | 2022-06-16 | Reagene Biosciences Pvt. Ltd. | Saliva based diagnostic assays for detection of sarscov2 receptor binding domain (rbd) neutralizing antibodies |
CN113651884A (en) * | 2021-05-25 | 2021-11-16 | 中国科学院微生物研究所 | Humanized anti-SARS-CoV-2 monoclonal antibody and its application |
US11999777B2 (en) | 2021-06-02 | 2024-06-04 | Regeneron Pharmaceuticals, Inc. | Methods for treating or preventing SARS-CoV-2 infections and COVID-19 with anti-SARS-CoV-2 spike glycoprotein antibodies |
CN115125251A (en) * | 2022-08-22 | 2022-09-30 | 广东忠信生物科技有限公司 | Method for efficiently obtaining specific fully human monoclonal antibody gene and application |
CN115125251B (en) * | 2022-08-22 | 2023-11-03 | 广东忠信生物科技有限公司 | Method for efficiently obtaining specific fully human monoclonal antibody gene and application |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
CN111909260B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111925439A (en) | Method for rapidly screening new coronavirus RBD (radial basis function) specific fully human neutralizing monoclonal antibody | |
CN111909263B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111909261B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111925440B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111925444B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111925441B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111925442B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111925443B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111909262B (en) | New coronavirus RBD specific monoclonal antibody and application | |
CN111944026A (en) | Linear epitope of monoclonal antibody specific to new coronavirus RBD and application | |
Yeh et al. | Bluetongue virus antibodies in domestic goats: a countrywide and retrospective study in the Republic of Korea | |
JPH04207195A (en) | Method for collecting nucleic acid component of virus and method for examining virus |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination | ||
RJ01 | Rejection of invention patent application after publication | ||
RJ01 | Rejection of invention patent application after publication |
Application publication date: 20201113 |