CN111320662A - N-benzyl substituted diamidinonazine derivative and pharmaceutical application thereof - Google Patents
N-benzyl substituted diamidinonazine derivative and pharmaceutical application thereof Download PDFInfo
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- CJBJHOAVZSMMDJ-HEXNFIEUSA-N darunavir Chemical compound C([C@@H]([C@H](O)CN(CC(C)C)S(=O)(=O)C=1C=CC(N)=CC=1)NC(=O)O[C@@H]1[C@@H]2CCO[C@@H]2OC1)C1=CC=CC=C1 CJBJHOAVZSMMDJ-HEXNFIEUSA-N 0.000 description 1
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- 229910052943 magnesium sulfate Inorganic materials 0.000 description 1
- CSNNHWWHGAXBCP-UHFFFAOYSA-L magnesium sulphate Substances [Mg+2].[O-][S+2]([O-])([O-])[O-] CSNNHWWHGAXBCP-UHFFFAOYSA-L 0.000 description 1
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- AICOOMRHRUFYCM-ZRRPKQBOSA-N oxazine, 1 Chemical compound C([C@@H]1[C@H](C(C[C@]2(C)[C@@H]([C@H](C)N(C)C)[C@H](O)C[C@]21C)=O)CC1=CC2)C[C@H]1[C@@]1(C)[C@H]2N=C(C(C)C)OC1 AICOOMRHRUFYCM-ZRRPKQBOSA-N 0.000 description 1
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- RWWYLEGWBNMMLJ-MEUHYHILSA-N remdesivir Drugs C([C@@H]1[C@H]([C@@H](O)[C@@](C#N)(O1)C=1N2N=CN=C(N)C2=CC=1)O)OP(=O)(N[C@@H](C)C(=O)OCC(CC)CC)OC1=CC=CC=C1 RWWYLEGWBNMMLJ-MEUHYHILSA-N 0.000 description 1
- RWWYLEGWBNMMLJ-YSOARWBDSA-N remdesivir Chemical compound NC1=NC=NN2C1=CC=C2[C@]1([C@@H]([C@@H]([C@H](O1)CO[P@](=O)(OC1=CC=CC=C1)N[C@H](C(=O)OCC(CC)CC)C)O)O)C#N RWWYLEGWBNMMLJ-YSOARWBDSA-N 0.000 description 1
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- NHKZSTHOYNWEEZ-AFCXAGJDSA-N taribavirin Chemical compound N1=C(C(=N)N)N=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 NHKZSTHOYNWEEZ-AFCXAGJDSA-N 0.000 description 1
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- KCFYEAOKVJSACF-UHFFFAOYSA-N umifenovir Chemical compound CN1C2=CC(Br)=C(O)C(CN(C)C)=C2C(C(=O)OCC)=C1CSC1=CC=CC=C1 KCFYEAOKVJSACF-UHFFFAOYSA-N 0.000 description 1
- 229960004626 umifenovir Drugs 0.000 description 1
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- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
- C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
- C07H19/056—Triazole or tetrazole radicals
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- A61P31/12—Antivirals
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- C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
- C07F9/02—Phosphorus compounds
- C07F9/547—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom
- C07F9/6561—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom containing systems of two or more relevant hetero rings condensed among themselves or condensed with a common carbocyclic ring or ring system, with or without other non-condensed hetero rings
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Abstract
N-benzyl substituted diamidinonazine derivative and its medicinal use, the structure is in accordance with general formula (I)Wherein: r is ribavirin and Rudexilvir. The medicine can act on an interaction interface of the Spike and the ACE2 protein, and can be used for preparing medicines for treating viral infection depending on ACE2 enzyme.
Description
Technical Field
The invention belongs to the field of pharmacy, and provides an N-benzyl substituted diamidinonazine derivative and a pharmaceutical application thereof.
Background
Angiotensin converting enzyme 2(ACE enzyme 2) is a homologous protein of the ACE enzyme. Coronavirus such as novel coronavirus (SARS-CoV-2) and atypical pneumonia (SARS-CoV) and middle east respiratory syndrome (MERS-CoV) enter cells by taking ACE2 enzyme as a receptor, so that infection of coronavirus can be reduced if expression of ACE2 enzyme can be prevented, and unexpected toxic and side effects can be generated because ACE2 enzyme has important physiological function and expression of ACE2 enzyme is prevented.
Coronavirus is combined with host cell ACE2 protein through outer coating protein-spike protein (also called S-protein, coronavirus is invaded into cell by virtue of the binding of spike protein and host cell surface receptor), if the combination can be prevented, the coronavirus has good inhibitory effect, and ideal anti-coronavirus medicine is obtained.
The computer simulation technology is adopted to scan the known medicine, the stronger binding capacity of the diaminazine (diamazene) to the interaction interface of the S-protein and the ACE2 protein is found (the docking score 8.0891 is shown in table 1), and the compound LJ-01 (the docking score 8.3138 is shown in table 1) with stronger binding capacity to the interaction interface of the S-protein and the ACE2 protein is obtained for the structural modification of the diaminazine (diaminazine) so as to indicate that the LJ-01 can better interfere the interaction of the S-protein and the ACE2 protein.
The LJ-01 is linked with a medicament possibly effective to the coronavirus, and a novel compound resisting coronavirus infection, which has better binding capacity to an interaction interface of an S-protein and an ACE2 protein, is expected to be obtained, so that the targeting property of the compound is improved, and the medicament effect and the safety are improved. The drugs that may be effective against coronaviruses were selected: ribavirin (ribavirin), Galidesivir, Reindesivir (remdesivir), GS-441524 (Reindesivir is a phosphate prodrug of GS-441524), Abidol (arbidol), lopinavir (lopinavir), Darunavir (daronavir), chloroquine (chloroquine), and the like.
The LJ-01 and the antiviral drugs above are linked in an ester bond mode, the obtained compound is subjected to computer simulation on the binding capacity of the interaction interface of the S-protein and the ACE2 protein, and the binding capacity (docking score) of part of compounds shows remarkable improvement (see table 1). Wherein LJ-01, ribavirin and Reidexilvir are linked in an ester group mode, and the binding capacity of the obtained compounds LJ-02 and LJ-04 (shown in Table 1: docking scores: 10.0797 and 10.5261) is remarkably improved, which indicates that the 2 compounds have stronger binding capacity on an interaction interface of S-protein and ACE2 protein.
Considering that Reidesciclovir is a phosphate prodrug of GS-441524, we linked LJ-01 and GS-441524 in an ester group manner, the binding capacity of the obtained compound did not show a significant improvement (see Table 1: LJ-10 docking score: 8.1196), and the binding capacity of the obtained compound LJ-09, which is also not shown to be significantly improved compared with LJ-02, by linking LJ-01 and a phosphate prodrug of ribavirin in an ester group manner (see Table 1: LJ-09 docking score: 9.0412). Indicating that this link is specific.
Preliminary in vivo drug metabolism studies showed that the target compounds obtained had better distribution in the lungs with high expression of ACE2 protein. Considering that the target compound can better interfere the interaction of the S-protein and the ACE2 protein, thereby reducing the infection of coronavirus, the medicine has better efficacy and safety.
Disclosure of Invention
The technical problem to be solved is as follows: the N-benzyl substituted diamidinonazine derivatives can act on an interaction interface of Spike and ACE2 protein, increase the distribution of the drugs in high-expression lung of ACE2 protein, and can be used for preparing drugs for treating virus infection depending on ACE2 enzyme.
The technical scheme is as follows: a kind of N-benzyl substituted diamidinonazine derivative, the structure is in accordance with the general formula (I)
The preferred structure is as follows:
the application of the N-benzyl substituted diamidinonazine derivatives in preparing medicaments for treating viral infection depending on ACE2 enzyme.
The medicine for treating viral infection depending on ACE2 enzyme has the effective component of N-benzyl substituted diamidinonazine derivative or its pharmaceutically acceptable salt.
Has the advantages that: the medicine can act on an interaction interface of the Spike and the ACE2 protein, increases the distribution of the medicine in the high-expression lung of the ACE2 protein, and can be used for preparing medicines for treating viral infection depending on the ACE2 enzyme.
Drawings
FIG. 1 is a graph showing the binding pattern of 2019-nCoV S protein and the receptor ACE2 protein obtained by homology modeling. The dark color is the 2019-nCoV S protein (left), the light color is ACE2 (right), and the linker is an interacting residue in both proteins (central cavity).
Detailed Description
The following examples are given to enable a person skilled in the art to fully understand the invention, but do not limit it in any way.
Example 1 in silico screening of compounds for binding ability to the interaction interface of S-protein and ACE2 protein:
the binding mode of 2019-nCoV S protein and the receptor ACE2 protein obtained by homologous modeling is adopted. The residues that interact in both proteins of the compound and the binding pattern were docked and scored. The scoring results are shown in Table 1
Example 2 synthesis of the target Compound 2.1 synthetic route for the key intermediate M-01:
the operation is as follows:
in a 100m L eggplant-shaped bottle, 11.8g (0.1mol) of p-aminobenzonitrile, 200mL of absolute ethanol, and 15.0g (0.1mol) of 3-formaldehyde benzoic acid were added and reacted at 50 ℃ for 4 hours. Filtering, dispersing the solid by 200mL of absolute ethyl alcohol, adding 5.0g of sodium borohydride in batches at 0 ℃, and reacting for 1h at 50 ℃ after the addition is finished. Adjusting pH to 3-5 with hydrochloric acid, filtering, adding 20mL of water into the filtrate, and filtering to collect solid.
100mL of water was added to the solid, and 20g of concentrated sulfuric acid and 20g of sodium nitrite were added at-5 to 0 ℃ to react at-5 to 0 ℃ for 1 hour. Sodium sulfite was added to eliminate the remaining sodium nitrite, 11.8g (0.1mol) of p-aminobenzonitrile was added dropwise, and the reaction was continued for 2 hours. Filtering to obtain solid. Adding 20mL of absolute ethyl alcohol and 10mL of 37% hydrochloric acid into the solid, reacting at room temperature for 10 hours, adding 20mL of ammonia water, reacting at-5-0 ℃ for 24 hours, reacting at room temperature for 48 hours, introducing hydrogen chloride at 0 ℃ until no solid is generated, and filtering to obtain a key intermediate M-01.
M-01:1H NMR(400MHz,DMSO-d6)δ(ppm)8.48(s,1H),8.37(s,1H),7.92-7.66(m,10H),4.24(s,2H)
2.2 Synthesis of target Compound 1:
the synthetic route is as follows:
the operation is as follows:
100m L A eggplant-shaped bottle was charged with 2.44g (10mmol) of ribavirin and anhydrous CH2Cl2100M L, ice bath, 5.63g (1.0mmol) of M-01 were added. DCC 2.4g (11.1mmol) dissolved in 50mL of anhydrous CH was added dropwise at 0 deg.C2Cl2After 1 hour of ice-bath reaction, 1.0g of DMAP was added and the reaction was carried out at room temperature for 12 hours. The precipitated DCU was filtered off, the solvent was evaporated off, and 100mL of ethyl acetate was added to dissolve it, and 5% NaHCO was used for each3Washing, washing with 5% citric acid, washing with saturated NaCl and anhydrous MgSO4And (5) drying. The solvent was evaporated off. And (4) performing column chromatography (petroleum ether-EtAc is 4: 1) to obtain the target compound 1.
Target compound 1:1H NMR(400MHz,DMSO-d6)δ(ppm)8.87(s,1H),8.45(s,1H),8.32(s,1H),7.90-7.62(m,12H),5.81(d,1H),5.58(d,1H),5.19(d,1H),4.92(t,1H),4.37-4.33(m,1H),4.16-4.11(m,1H),4.25(s,2H),3.97-3.93(m,1H),3.66-3.15(m,1H),3.50-3.47(m,1H)
2.3 Synthesis of target Compound 2:
referring to the method of the target compound 1, the synthesis is carried out by using the Rudexilvir and the key intermediate M-01.
Target compound 2:1H NMR(400MHz,DMSO-d6)δ(ppm):8.46(s,1H),8.36(s,1H),7.92-7.65(m,11H),7.34-7.26(m,2H),7.21-7.11(m,3H),6.92(d,1H),6.88(d,1H),4.79(d,1H),4.43-4.33(m,2H),4.30-4.27(m,1H),4.24(s,2H),4.17(t,1H),4.03-4.01(m,1H),3.98-3.84(m,2H),1.49–1.40(m,1H),1.35–1.27(m,8H),0.85(t,6H),0.72(d,3H),.31P NMR(162MHz,DMSO-d6)δ(ppm)3.66(s)
example 3: investigation of distribution of target compounds in animals
SPF grade SD rats, 6-8 weeks old, 180 g in weight, male, were injected intravenously with the target compound 1(12.8mg/kg, 2.0mmol/L) and 1 hour after administration, blood concentration and concentration in lung tissue were measured with ribavirin as a reference (4.88mg/kg, 2.0 mmol/L).
TABLE 2 comparison of ribavirin concentrations in blood, liver, and lungs 1 hour after intravenous administration of target Compound 1 (ribavirin as a control)
Compound numbering | Blood, blood-enriching agent and method for producing the same | Liver disease | Lung (lung) |
1 | 0.6 | 0.7 | 2.8 |
Ribavirin | 1.0 | 1.0 | 1.0 |
The above experimental results show that: after the target compound 1 is injected, compared with the ribavirin injection, the concentration degree of the drug in blood and liver is obviously reduced, and the drug concentration in lung tissue is obviously increased. The target compound 1 is proved to have a targeting effect on the lung with high expression of ACE2 enzyme.
The distribution of the target compound 2 in the animal body is investigated by the same method, and the results are shown in Table 3
Table 3 comparison of the concentrations of Reidesciclovir (containing its metabolites) in blood, liver and lung 1 hour after intravenous administration of object compound 2 (Redesciclovir as control)
Compound numbering | Blood, blood-enriching agent and method for producing the same | Liver disease | Lung (lung) |
1 | 0.5 | 0.6 | 3.2 |
Reidesciclovir and metabolites thereof | 1.0 | 1.0 | 1.0 |
The above experimental results show that: after the injection of the target compound 2, compared with the direct injection of the Reidesvir, the concentration of the drug in blood and liver is obviously reduced, and the concentration of the drug in lung tissue is obviously increased. The target compound 1 has a targeting effect on the lung with high expression of ACE2 enzyme.
Claims (4)
3. use of a class of N-benzyl substituted diamidinonazine derivatives as claimed in claim 1 or claim 2 in the manufacture of a medicament for the treatment of ACE2 enzyme dependent viral infections.
4. A medicament for the treatment of ACE2 enzyme dependent viral infections characterized in that the active ingredient is a class of N-benzyl substituted diamidinonazine derivatives according to claim 1 or 2 or a pharmaceutically acceptable salt thereof.
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