CN111166895B - Immune microenvironment regulator combination, coding nucleic acid and application thereof - Google Patents

Immune microenvironment regulator combination, coding nucleic acid and application thereof Download PDF

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CN111166895B
CN111166895B CN201811343943.9A CN201811343943A CN111166895B CN 111166895 B CN111166895 B CN 111166895B CN 201811343943 A CN201811343943 A CN 201811343943A CN 111166895 B CN111166895 B CN 111166895B
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Abstract

The invention provides an immune microenvironment modulator combination, which comprises a PD-1/PD-L1/2 channel, a CTLA-4/CD80/CD86 channel and a TGF-beta channel inhibitor. In particular, fusion proteins comprising the combination, nucleic acids encoding the proteins of the components of the composition are provided. The composition comprises amino acid sequences shown as SEQ ID NO 1, SEQ ID NO 2, SEQ ID NO 3, SEQ ID NO 4, SEQ ID NO 5 and SEQ ID NO 6. Vaccine compositions comprising the compositions and routes of delivery of the compositions are also provided. The immunomodulator composition of the present invention can provide protective immunity against pathogen infection, and can be used for prevention and/or treatment of various tumors.

Description

Immune microenvironment regulator combination, coding nucleic acid and application thereof
Technical Field
The invention relates to the field of medical products, in particular to an immune microenvironment regulator combination, a coding nucleic acid and application thereof.
Background
Traditionally, tumor cell immunotherapy has been mainly to stimulate the immune system by vaccination or adoptive cell immunotherapy, thereby eliciting an immune response. This approach is based on the assumption that: tumor cells express tumor-specific antigens and are presented by MHC complexes to the surface of tumor cells, while anti-tumor T cells are not fully activated. Therefore, to address this problem, attempts have been made primarily to increase the recognition of these antigens by stimulating key positive co-immune and innate immune pathways (such as CD28, CD40L (CD154) and various TLR receptors), or inhibiting negative immunosuppressive pathways (such as CTLA-4 receptors).
In recent years, it has become clear that the immune system does recognize tumor antigens, but despite the presence of tumor antigens, T cells are assured to remain quiescent. Based on this phenomenon, there is a hypothesis that: there are inhibitory mechanisms that limit or turn off the specificity of the anti-tumor immune response. When a negative regulatory T cell surface molecule is up-regulated in the expression of activated T cells, its activity is attenuated, resulting in less effective tumor cell killing. These inhibitory molecules are called negative costimulatory molecules due to their homology to the T cell costimulatory molecule CD 28. These proteins, also known as immunodetection point proteins, play a role in multiple pathways, such as attenuation of early activation signals, competition with positive costimulatory molecules and direct inhibition by antigen presenting cells. The members of the protein family are programmed death factor-1 (PD-1) and its ligands B7-H1/PD-L1 and B7-DC/PD-L2, and CTLA-4/CD80 or CD 86.
CD28 is a cell surface glycoprotein that is constitutively expressed on the surface of most mature T cells and thymocytes. CTLA-4 receptors are detectable only in T cells 2-3 days after activation, but are not expressed in resting T cells. The primary ligands for CD28 and CTLA-4 molecules are CD80 and CD86 molecules expressed on the surface of Antigen Presenting Cells (APCs). The biological rationale for the presence of at least two receptors (CD 28 and CTLA-4) and two ligands (CD 80 and CD 86) is currently unknown. The current research shows that CD80 inhibits the activation of T cells by binding with CTLA-4 on the surface of the T cells; meanwhile, CD80 can also provide a costimulatory signal for T cell activation by binding with CD28 on the surface of T cells, and induce the proliferation of T cells and the secretion of cytokines.
PD-1 is expressed on activated T cells, B cells, and on monocytes that are involved in mediating the balance of immune activation and tolerance. Its main role is to limit T cell activity around inflammation and to limit autoimmunity in the inflammatory response to infection. The basis for this regulation is that the ligands PD-L1 and PD-L2 of the PD-1 molecule are upregulated in response to a variety of proinflammatory factors and can bind to PD-1 molecules on activated T cells in inflamed tissues, inhibiting T cell function, thereby limiting the immune response.
In addition, it was found that PD-L1 expression is often upregulated in a variety of different tumors, which results in the development of immune escape by inhibiting local anti-tumor T cell responses by binding to PD-1 on tumor-infiltrating lymphocytes. Researches show that nearly more than half of tumor infiltration CD8 positive T cells in cervical cancer and liver cancer express PD-1 molecules, and the combination of the PD-L1 molecules expressed on the surface of tumor cells can lead to the exhaustion and apoptosis of the T cells.
Transforming growth factor-beta (TGF-beta) is a multifunctional cytokine that can affect cell growth, differentiation, apoptosis, etc. In addition, TGF-. beta.has an important immunomodulatory role. TGF-. beta.s can effectively inhibit T cell function and antigen presenting ability of DC cells. Recent studies have elucidated a direct role of TGF- β in the expression of the upregulating plasma cell-like dc (pdc) immunomodulatory enzyme indoleamine 2, 3-dioxygenase (IDO) and lead to long-term T cell tolerance. IDO inhibits the activity of effector T cells and promotes Treg differentiation and activation by catalyzing the degradation of the essential amino acid tryptophan.
Transforming growth factor-beta (TGF- β) signals by binding to the transforming growth factor-beta receptor (TGFBR) complex. The TGFBR family includes type I receptors (TGFBR 1), type II receptors (TGFBR 2) and type III receptors (TGFBR 3) depending on the molecular structural and functional characteristics. TGFBR1/2 belongs to the transmembrane type receptor serine/threonine kinase family, and contains serine/threonine kinase domain in cells. After binding of TGF- β to the TGFBR1/2 heterodimer, downstream signaling molecules are activated, which in turn activates signaling. The TGFBR3 intracellular segment does not contain active regions of kinases and is not directly involved in signaling, primarily regulating the binding of TGF- β to signaling receptors, also known as coreceptors.
The type III transforming factor-beta receptor (TGFBR 3) is a co-receptor of the classic TGF-beta signaling pathway, involved in mediating SMAD-dependent and SMAD-independent downstream signaling pathways. It was found that the expression level of TGFBR3 was significantly down-regulated compared to the patient's paracancerous normal tissue in the early stages of many tumors, such as breast cancer. There is data showing that TGFBR3 inhibits cell migration and invasion in some tumor models, indicating that TGFBR3 has the function of inhibiting tumor progression and metastasis.
Aiming at the problems, the interaction of PD-1/PD-L1 and CD80 or CD86/CTLA-4 and a TGF-beta signal path are blocked, so that the immunosuppression can be relieved, and the immunocompetence of T cells can be improved. Is helpful for the immune system to eliminate tumor cells.
Recently, several immunodetection point inhibitor drugs targeting the PD-1 receptor and its ligands PD-L1 as well as CTLA-4 have been approved for sale. The immune checkpoint inhibitor has good clinical efficacy in patients with various tumors such as melanoma, renal cancer, colorectal cancer, non-small cell lung cancer, liver cancer and the like. However, many current clinical study data indicate that clinical response rates are low using only an immunodetection point inhibitor such as the PD-1/PD-L1 antibody, and that only about 15% of patients can receive clinical benefit, such as in liver cancer patients. In more recent studies, the antitumor effect of combination with PD-1 pathway immunodetection point inhibitors has been evaluated in clinical models.
For example, studies have reported that transfection of sirnas using PD-1 ligands PD-L1 and PD-L2 into Dendritic Cells (DCs) inhibited the expression of PD-L1 and PD-L2, and dendritic cell vaccines were prepared by loading dendritic cells with minor histocompatibility antigens (MiHA). These MiHA-loaded PD-L1/L2 silenced DCs showed highly efficient activation and amplification of MiHA-specific T cell function: the function of MiHA-specific CD8+ T cells can be obviously enhanced; compared with MiHA-loaded DCs which are not silenced by PD-L1/L2, the expanded MiHA-specific CD8+ T cells are increased by 14.4 times in the in vitro stimulation process of one week, and the expanded T cells are increased by 20 times in the in vitro stimulation process of two weeks. (A.B. van der Waart et al, 2015, Cancer Immunol Immunother (2015) 64: 645-654).
Similarly, a dendritic cell vaccine prepared by silencing PD-L expression of DC cells with siRNA-lipid-nanoparticle complexes targeting PD-L1/L2 and loading the DC with antigen mRNA or polypeptide can effectively increase helper T cells (Th 1 and Th2 cells) and antigen-specific CD8+ T cell responses from allogeneic stem cell transplanted tumor patients (Mieke W.H. Roeven et al, J Immunother 2015;38: 145-154).
Another study examined the effect of purkinje cells (KC) silenced PD-L1 in the liver on natural killer cells (NK cells) and CD8+ T cells. The data indicate that PD-L1 silenced purkinje cells (KC) are able to increase NK cell function and aggregation in the virus-infected liver; meanwhile, the composition can also enhance the accumulation of CD8+ T cells in virus-infected tissues, the killing capacity and cell proliferation of virus-infected cells, the virus clearing capacity and memory mediated by CD8+ T cells (Joseph S Dolina et al, Molecular Therapy-Nucleic Acids (2013) 2, e 72).
Another report examining the effect of PD-L1 inhibition on tumor growth showed that systemic use of anti-PD-L1 antibody plus melanoma peptide-loaded Dendritic Cells (DCs) was able to produce a greater number of melanoma peptide-specific CD8+ T cells, but this combination was not sufficient to retard the growth of existing B16 melanoma. Although additional body irradiation retards tumor growth, further adoptive transfer of antigen-specific CD8+ T cells is required to achieve tumor regression and long-term survival in the treated mice (pin-Thomas et al 2010.J Immunol) 1; 184 (7): 3442-9).
Recently, a study reported that down-regulation of TGFBR3 expression resulted in an immune-tolerant microenvironment. In the mouse breast cancer tumor model, the breast cancer tumor cells overexpressing TGFBR3 showed a significant growth inhibition compared to the breast cancer tumor cells lacking TGFBR3 expression, which was also observed in the melanoma tumor model. Further data show that there are more CD4+ FOXP3+ Treg cells and less CD3+ CD8+ cytotoxic T cell infiltration in the mouse mammary carcinoma model with loss of TGFBR3 expression (Brent A. Hanks et al, J Clin invest.2013, 9/3; 123 (9): 3925-.
In summary, various studies to date have shown that the use of immunodetection point inhibitors appears to represent a new and very promising approach for improved tumor immunotherapy. However, the combination of a vaccine with a single immune checkpoint inhibitor often does not result in the expected improvement of the immunotherapeutic effect, and the clinical use of immune checkpoint inhibitor combinations targeting multiple negative co-stimulatory receptors, such as anti-PD-1 antibodies with anti-CTLA-4 antibodies, or the combination of immune checkpoint inhibitors with other therapies may induce severe toxic responses.
Disclosure of Invention
It is therefore an object of the present method to provide a safe and effective means for the treatment based on immune checkpoint inhibitors, in particular based on inhibitors of the PD-1 and CD80 pathways, especially for the treatment of tumors and/or infectious diseases.
In particular, the object of the present invention is solved by providing a vaccine/immune microenvironment modulator, in particular an immune checkpoint inhibitor combination, comprising as a vaccine an RNA vaccine comprising at least one RNA or DNA (comprising at least one open reading frame encoding at least one antigen), or a DNA vaccine, more even an antigenic polypeptide vaccine, and as a modulator a PD-1 pathway inhibitor, a CTLA-4 pathway inhibitor, a transforming growth factor beta inhibitor. In addition, the vaccine/modulator combination may be in the form of a mixture containing the combination nucleic acid or polypeptide, or autologous DC cells, autologous or allogeneic PBMC cells loaded with at least one of the RNA/DNA or antigenic polypeptides described above and nucleic acids encoding the inhibitors described above (including DNA and RNA), or other forms including the vaccine/inhibitor components. In addition, the object is solved by a combination of an RNA or polypeptide vaccine and an inhibitor for use in a method for treating tumors or infectious diseases.
In the present invention, "antigen" refers to a substance that can be recognized by the immune system and is capable of eliciting an antigen-specific immune response by forming antibodies or/and antigen-specific T cells. In general, an antigen can be a protein or polypeptide that comprises at least one antigenic epitope and can be presented by the Major Histocompatibility Complex (MHC) to the surface of a T cell. In the present invention, the antigen may be a product of translation of mRNA or a product of transcription and translation of DNA.
A vaccine is typically understood to provide one or more antigens, preferably immunogens, for prophylactic or therapeutic substances. For example, a vaccine comprises the antigen, or a nucleic acid encoding the antigen, which may be DNA or RNA; or cells expressing the antigen, such as DC cells or PBMC cells. The antigen or immunogen may be derived from any material suitable for vaccination.
The antigenic nucleic acid molecules of the present invention encode immunogenic peptides of bacteria, viruses, fungi, or other pathogens including, but not limited to, human hepatitis viruses including HAV, HBV, HCV, cytomegalovirus CMV, human immunodeficiency virus HIV, EB virus, dengue virus, Human Papilloma Virus (HPV), respiratory syncytial virus, rhinoviruses, human T-lymphotropic virus type I (HTLV-1), influenza, Bovine Leukemia Virus (BLV), pertussis, polio, measles, mumps, rubella, smallpox, shingles, anthrax, tetanus, rotavirus, rabies, fowl pox, meningococcus, anthrax, encephalitis, pneumococci, streptococcus, staphylococci, neisseria, escherichia coli, shigella, leishmania, respiratory syncytial virus, parainfluenza, neisseria, and the like, Adenovirus, varicella, flavivirus, mycobacterium tuberculosis, malaria, and the like.
In one embodiment, the antigenic nucleic acid molecule encodes a tumor antigen. In this case, the tumor antigen may be expressed on the surface, cytoplasm, or nucleus of the tumor cell. The tumor antigen may also be selected from proteins that are overexpressed in tumor cells compared to normal cells. Tumor antigens can be further divided into tumor-associated antigens (TAAs) and tumor-specific antigens (TSAs). Tumor Associated Antigens (TAAs) are a class of antigenic molecules found in both tumor and normal cells, including: embryonic proteins, glycoprotein antigens, squamous cell antigens, and the like. Tumor-associated antigens are not specific to tumor cells, and normal cells can also be synthesized in minute quantities and highly expressed when tumor cells proliferate. Tumor-specific antigens refer to neoantigens that are expressed only on the surface of tumor cells and not on normal cells. Such antigens may be present in tumors of different individual consenting tissue types, e.g. melanoma specific antigens encoded by human malignant melanoma genes may be present in melanoma cells of different individuals, but not expressed by normal melanocytes. TSA can also be common to tumors of different histological types, for example, mutated Ras gene products can be commonly found in lung cancer, digestive tract tumors, etc., but because its amino acid sequence is inconsistent with the expression product of normal proto-oncogene Ras, it can be recognized by the immune system of the body to stimulate the immune response of the body. In general, such antigens resulting from mutations are referred to as neoantigens (neoantigens). These antigens are all recognized by cytotoxic T lymphocytes and cells presenting the antigen can be killed by T lymphocytes.
Preferred tumor antigens according to the invention are selected from the list consisting of TDO, MAGEC, HMOX, WT, LY6, AIM, IDO, CHI3L, IL13RA, LCK, GFAP, KIF20, CNTN, MUC, PEG, TNC, SOX, IGF2BP, S100A, AKAP, TTK, CHI3L, PTHLH, CDC, PMEL, TOP2, PTTG, NRCAM, HMMR, MUC, LY6, SOX, FOSL, PRAME, FOLR, BIRC, KIF2, ITGAV, ART, PROM, CT, S100A, PPIB, S100A, STAT, EPCAM, MLANA, KAROAG, KLK, NT5, PTKLPRZ, SPAG, MET, RGS, CSPG, PDCD1LG, PSC, CD274, PSCA, HD, BP, TSHAVANA, TSROAG, TSKLK, ATKP, EPCR, EPZC, EPSCH, ATCK, ACSCH, TAC, S100A, TAC, S, TAC, S, TAC, S, TAC, S, PTGS, PLK, DDX, PA2G, PAX, IDH, SFMBT, EPHA, NAPSA, LPGAT, NUF, SPAG, STAT, MELK, ST8SIA, EBAG, KIFC, CEACAM, RPL, SYCP, DSE, ANKRD30, TRAPPC, RGS, MGAT, KRT, B3GALNT, CAGE, AGER, ACRBP, LAG, NELFA, RAB, CCND, SART, UBE2V, SLAMF, KCNMA, MUM, HSPH, GUCY1A, AKAP, SQSTM, BCAN, CCNB, TP, SUGT, AURKA, RAN, 6, NLGN4, SART, PRKDC, FOXP, EGF, PIK3R, SLC1A, PCNA, KIF1, BSG, ATP2A, NFAG, NFART, NFAR 8, PALC, TYRC, TRIRC, SARC, SACK 5, SARC, SACK 1, SARC, SACK 5, SARC, SACK 1A, SACK 1, SACK 1, SACK 1, SACK 1, SACK, SAG, SACK, CTAG1, CTAGE, E, FMR1NB, GAGE, GAGE2, GAGE, GAGE, GAGE, GAGE, GAGE, GRDX, HNPRL, IGHD, MAGEA, MAGEA, MAGEA, MAGEA, MAGEA, MAGEA, MAGEA, MAGEA, MAGEA, MAGEB, MAGEB, MAGEC, PAGE, PAP, SAGE, SPANXB, SPO, SSX, SSX, SSX, Brachyury/TFT, TTR, TYRP, VSIR, XAGE1, XAGE1, ENAH, AKR1B, GPC, AFP, FLIR, FGF, PSPH, ABL, CCT, SMYD, TMEM106, ZNF260, EPCAM, ICK, PHF20L, ANXA, ZNF, CASK, FAM122, IRS, VCR 6, TMSH, VAOTF, TTTSF, TTTSZ, TTUTP 14.
Furthermore, tumor antigens may also include individual tumor-specific neoantigens which are produced by genetic mutations in tumor cells. The mutated gene may be any gene in a cell, and the expression product thereof may be expressed on the cell surface or inside the cell.
In order to prevent RNA instability and degradation in multiple pathways, various optimizations of nucleic acid molecules can be performed based on the known multiple natural degradation pathways of RNA. For example, the terminal structure is crucial for the stability of mRNA. For example, at the 5 ' end of a naturally occurring mRNA, a modified guanosine nucleotide is present, referred to as a 5 ' cap structure, and the 3 ' end has an adenosine nucleotide (i.e., poly-A tail) structure of about 200-300 bases in length, and 5 ' and 3 ' UTR sequences, such as those of human beta-globin.
The immune microenvironment regulator combination provided by the invention comprises a PD-1/PD-L1 inhibitor and a TGF pathway inhibitor. . In one embodiment, it is a soluble PD-1 molecule, a soluble CD80 molecule and a soluble TGFBR3 molecule.
In one embodiment, the soluble PD-1 molecule is human sPD-1-Fc having an amino acid sequence comprising SEQ ID NO: 1. SEQ ID NO:3 and SEQ ID NO: 4; the soluble CD80 molecule is human sCD80-Fc having a heavy chain comprising SEQ ID NO: 2. SEQ ID NO:3 and SEQ ID NO: 4; the soluble TGFBR3 molecule is human sTGFBR3-Fc having an amino acid sequence comprising SEQ ID NO: 5. SEQ ID NO:3 and SEQ ID NO: 4. In one embodiment, the soluble PD-1 and CD80 molecules are a fusion protein having an amino acid sequence comprising SEQ ID NO: 1. SEQ ID NO: 2. SEQ ID NO:3 and SEQ ID NO: 4; the soluble TGFBR3 molecule is human sTGFBR3-Fc having an amino acid sequence comprising SEQ ID NO: 5. SEQ ID NO:3 and SEQ ID NO: 4.
In another aspect, the invention provides nucleic acid molecules encoding immune microenvironment modulators of the invention. In one embodiment, the nucleic acid molecule encodes sPD-1-Fc and has a sequence comprising SEQ ID NO: 12. SEQ ID NO: 13. SEQ ID NO: 14 and SEQ ID NO: 15, or a sequence of seq id no; the nucleic acid molecule encodes sCD80-Fc and has a sequence comprising SEQ ID NO: 12. SEQ ID NO: 13. SEQ ID NO: 14 and SEQ ID NO: 16; the nucleic acid molecule encodes sCD80-Fc and has a sequence comprising SEQ ID NO: 12. SEQ ID NO: 13. SEQ ID NO: 14 and SEQ ID NO: 17, and (ii) a sequence of (d); in one embodiment, the nucleic acid molecule encodes a PD-1/CD80 fusion protein and has an amino acid sequence comprising SEQ ID NO: 12. SEQ ID NO: 13. SEQ ID NO: 14 and SEQ ID NO: 18, or a pharmaceutically acceptable salt thereof. In one embodiment, one nucleic acid molecule encodes both sPD-1-Fc and sCD80-Fc molecules, which are linked to the coding frames of sPD-1-Fc and sCD80-Fc by a ribosome entry site (IRES) and comprise a sequence having the sequence given in SEQ ID NO: 12. SEQ ID NO: 13. SEQ ID NO: 14 and SEQ ID NO: 20 or SEQ ID NO: 21, and (b) 21.
In the present invention, the soluble protein comprises an Fc domain. Fc domains include native human or other animal Fc and Fc variants and full-length or fragments of molecules, including, for example, IgA, IgD, IgG, IgM, IgE and subtypes thereof such as IgG1, IgG2, IgG3, IgG4, and the like. The IgG domain of the invention may be an antibody of any isotype, including IgA, IgD, IgG, IgM, IgE and their subtypes such as IgG1, IgG2, IgG3, IgG4, IgA1 and the like as previously described. In a particular embodiment, the domain of Fc used is IgG 1.
The vaccine/modulator compositions of the present invention may be delivered to host cells in vivo by methods known in the art. In one embodiment, the vaccine/modulator compositions of the present invention can be introduced in vivo by a viral vector such as adenovirus (AdV), adeno-associated virus (AAV), retrovirus, lentivirus, herpes simplex virus, and the like. In addition, the vaccine/modulator compositions of the present invention may also be introduced by transfection of liposomal nanoparticles into host cells. In one embodiment, the vaccine/modulator composition of the present invention can be introduced into the subject's own DC cells by electroporation, or introduced into the subject's body using the DC cells as a vector. In one embodiment, the vaccine/modulator composition of the present invention may be introduced into autologous PBMC cells or allogeneic PBMC cells of a subject by electroporation, and the autologous PBMC cells or allogeneic PBMC cells are used as vectors for introduction into the subject.
Drawings
FIG. 1 shows soluble sPD-1, sCD80-Fc, sPD-1-CD80, sTGFBR3-Fc expression levels
FIG. 2 is a phenotype of DC cells transfected with soluble protein nucleic acid molecules, wherein the surface of mature DC cells (mDC-PP 65 and mDC-PP 65/group of soluble protein nucleic acid molecules) are significantly upregulated in CD80, CD86, and CD83, as compared to Immature Dendritic Cells (iDC), showing significant characteristics of mature DC cells; compared with DC cells transfected with pp65 antigen only, the phenotype of DC cells transfected with pp 65/soluble protein is consistent with that of DC cells transfected with pp65 antigen only.
FIG. 3 is a graph of the effect of immune modulator combinations on T cell responses, with higher proportions of TNF-a and IFN-r expression in DC cells transfected with pp 65/soluble protein compared to the pp65 antigen alone.
Detailed Description
The following detailed description of specific embodiments of the invention, which are intended to be illustrative only, and the invention is described in further detail. These examples should not be construed as limiting the invention thereto.
The first embodiment is as follows: preparation of DNA and mRNA encoding antigens and immunodetection Point inhibitors
1. Preparation of DNA and mRNA constructs
The DNA sequences for the mRNA encoding the CMV virus pp65 protein, for the mRNA encoding the sPD-1-Fc, sCD80-Fc, sPD-1-CD80 and sTGFBR3-Fc fusion proteins of the invention were constructed for this example and used for the subsequent in vitro transcription reactions. Constructs were made by codon-optimization to introduce high GC sequences to stabilize the synthetic mRNA, followed by a 3' UTR sequence of human-derived β -globin, followed by a segment of polyadenylic acid (including but not limited to the 64 adenosine or longer poly-a-sequence used in this example).
2. In vitro transcription
The corresponding DNA plasmid prepared according to example 1 was first linearized using the speI endonuclease and mRNA prepared by in vitro transcription using T7 RNA polymerase using the linearized plasmid as template. The prepared mRNA was then purified by lithium chloride precipitation.
Example two: verification of expression level of immunosuppressant composition mRNA in dendritic cells and influence on dendritic cell phenotype
1. In vitro induction culture of DC cells
Aseptically extracting 50ml of healthy human venous blood, separating peripheral blood mononuclear cells by using lymphocyte separation liquid in an ultraclean workbench, adding the mononuclear cells into an AIM-V culture medium, and placing the AIM-V culture medium into a 37 ℃ and 5% CO2 culture box for incubation so as to adhere the mononuclear cells to the wall. After 2h, nonadherent cells were removed and adherent cells were cultured in iDC medium (GM-CSF was added to AIM-V medium to a final concentration of 800U/mL and IL-4 was added to 500U/mL) at 37 ℃ in a 5% CO2 incubator for 6 days. Half of the cell culture medium was transferred to a centrifuge tube, and 500g of the medium was centrifuged to collect cells, the supernatant was removed, and an equal volume of fresh mDC medium (the formulation of the fresh mDC medium: 1600U/mL GM-CSF and 1000U/mL IL-4, TNF-a (5 ng/mL), IL-1 beta (5 ng/mL), IL-6 (150 ng/mL) and prostaglandin E2 (PGE 2) (1 ug/mL)) was added to resuspend the cells, which were then added to a flask and cultured for 8-18 hours to induce DC cell maturation.
2. Transfection of DC cells with immunosuppressant compositions
On the day of transfection, DC cells were digested into cell suspensions using non-enzymatic cell digestion reagents, centrifuged, washed twice with PBS, and resuspended in PBS to adjust cell density to 25-30X 106 DCs/ml. The DC cells were mixed with soluble protein (sPD-1-Fc, sCD80-Fc, sTGFBR3-Fc or PD-1-CD 80) mRNA at a rate of 4ug mRNA per 106 DC cells transfected, the cell-mRNA mixture was added to the electric rotor, and the antigen mRNA was transfected into the DC cells using an ECM630 electric rotor. The cells after electroporation were resuspended in cytokine-free AIM-V medium, adjusted to a cell density of 1X 106 DCs/ml, seeded into 96-well cell culture plates at a volume of 200. mu.l per well, and cultured in a 5% CO2 cell culture chamber at 37 ℃. GFP mRNA was transfected into DC cells under the same conditions as the control group.
3. Determination of transfection efficiency
After 24 hours of transfection, the proportion of DC cells expressing green fluorescent protein in all DC cells was analyzed by flow cytometry, and as shown in FIG. 1, the transfection efficiency of DC cells was more than 50% after 24 hours of transfection.
4. Soluble protein expression assay
After transfection, cell supernatants were collected at 24-hour intervals, and the concentrations of each soluble protein in the supernatants were measured using ELISA kits. The results of the detection are shown in FIG. 1. As a result, it can be seen that the mRNA encoding the soluble protein described in the present invention can express a higher level of the target protein in DC cells.
5. Identification of DC cell phenotype
Using direct immunofluorescence labeling, transfected DC cells were centrifuged, FACS buffer (2% FBS in PBS) was used to resuspend the DC cells at a cell concentration of 1X 106cells/ml, 100ul of transfected DC cell suspension was added to a flow cell tube, and 5ul of the corresponding antibodies CD80, CD83, CD86, and the corresponding isotype control, respectively, were added. Staining at 4 ℃ for 30min in the dark. 3ml of FACS Buffer was added to each tube to wash the cells, the supernatant was discarded, 500ul of FACS Buffer was added, and expression of CD80, CD83, and CD86 was detected by flow analysis. As shown in fig. 2, the cell surface molecules CD80, CD83, CD86 of the DC-immunomodulator composition were stably expressed without significant difference compared to untransfected DC cells.
Example three: effect of immunomodulator compositions on T cell response
1. In vitro induction culture of DC cells
Aseptically extracting 50ml of healthy human venous blood, separating peripheral blood mononuclear cells by using lymphocyte separation liquid in an ultraclean workbench, adding the mononuclear cells into an AIM-V culture medium, and placing the AIM-V culture medium into a 37 ℃ and 5% CO2 culture box for incubation so as to adhere the mononuclear cells to the wall. After 2h, nonadherent cells were removed and adherent cells were cultured in iDC medium (GM-CSF was added to AIM-V medium to a final concentration of 800U/mL and IL-4 was added to 500U/mL) at 37 ℃ in a 5% CO2 incubator for 6 days. Half of the cell culture medium was transferred to a centrifuge tube, and 500g of the medium was centrifuged to collect cells, the supernatant was removed, and an equal volume of fresh mDC medium (the formulation of the fresh mDC medium: 1600U/mL GM-CSF and 1000U/mL IL-4, TNF-a (5 ng/mL), IL-1 beta (5 ng/mL), IL-6 (150 ng/mL) and prostaglandin E2 (PGE 2) (1 ug/mL)) was added to resuspend the cells, which were then added to a flask and cultured for 8-18 hours to induce DC cell maturation.
2. Transfection of DC cells with immunosuppressant compositions
On the day of transfection, DC cells were digested into cell suspensions using non-enzymatic cell digestion reagents, centrifuged, washed twice with PBS, and resuspended in PBS to adjust cell density to 25-30X 106 DCs/ml. The DC cells and the antigenic mRNA were combined with soluble protein (sPD-1-Fc, sCD80-Fc, sTGFBR3-Fc or PD-1-CD 80) mRNA in a ratio of 4ug of mRNA transfected per 106 DC cells, the cell-mRNA mixture was added to an electric rotor, and the antigenic mRNA was transfected into the DC cells using an ECM630 electric transducer. The cells after electroporation were resuspended in a cytokine-free 1640 medium, the cell density was adjusted to 2X 105 DCs/ml, and the cells were cultured in a 5% CO2 cell culture chamber at 37 ℃ for 6 hours.
3. MNC cells recovered overnight were inoculated at a concentration of 2' 106/ml into 96-well plates, and activation of T lymphocytes was performed. The test grouping case is: a MNC blank control group, a MNC + antigen mRNA-DC vaccine group, a MNC + antigen/M immunomodulator composition mRNA-DC vaccine group and a MNC + PMA/Ionomycin positive control group; according to grouping conditions, DC cells loaded with corresponding mRNA are added into different holes, and the ratio of MNC to DC =10: 1; the concentration of Anti-CD3/Anti-CD28 in the positive control is 1 mu g/ml or the concentration of PMA/Ionomycin is 50ng/ml and 1 ug/ml; culturing at 37 ℃ for 10-12 days.
4. Adding 2 mu M monensin or 3 mu g/ml Brefeldin A into the cell culture solution 5-8h before collecting cells, and fully and uniformly mixing; (Monensin and Brefeldin A should not exceed 12h in cytosol as blockers of protein transport).
5. The cells were transferred to a flow tube, stained with fluorescently labeled antibodies to CD3, CD4, and CD8, fixed and permeabilized, and stained intracellularly with fluorescently labeled antibodies to TNF-a and IFN-r.
6. The ratio of TNF-a + and IFN-r + cells in lymphocytes was measured by flow cytometry.
As shown in FIG. 3, DC cells loaded with antigen mRNA, antigen mRNA plus an immunomodulator mRNA, or antigen/immunomodulator composition mRNA, all elicited an anti-tumor specific immune response in T lymphocytes after co-culture with T cells. Only in the group to which the immunomodulator composition was added (STGFBR 3+ PD1+ CD 80), the T lymphocytes had a stronger anti-tumor specific immune response. In the control group (pp 65 group), the proportion of cells secreting tumor necrosis factor (TNF-a) was 0.45%, whereas in the STGFBR3+ PD1+ CD80 group, the proportion was 2.28% which was 5.07 times that of the control group; whereas, when only a single modulator or a group of two modulators was transfected, the proportion of cells secreting tumor necrosis factor (TNF-a) was not significantly different from the control. Similarly, in the control group (pp 65 group), the proportion of cells secreting interferon gamma (IFN-r) was 0.42%, whereas in the STGFBR3+ PD1+ CD80 group, the proportion was 5.1% which was 12.14 times that of the control group; other groups transfected with either a single modulator or two modulators did not show significant differences in the proportion of tumor necrosis factor (TNF-a) secreting cells compared to the control. The data fully demonstrate that the immunomodulator combination provided by the invention can significantly enhance the antigen presenting capability of DC cells, stimulate the T lymphocytes and improve the anti-tumor specific immune response of the T lymphocytes.
Sequence listing
<110> Beijing Qichen Biotech Ltd
<120> a soluble protein composition and uses thereof
<141> 2018-11-13
<160> 20
<170> SIPOSequenceListing 1.0
<210> 1
<211> 167
<212> PRT
<213> Homo sapiens
<400> 1
Met Gln Ile Pro Gln Ala Pro Trp Pro Val Val Trp Ala Val Leu Gln
1 5 10 15
Leu Gly Trp Arg Pro Gly Trp Phe Leu Asp Ser Pro Asp Arg Pro Trp
20 25 30
Asn Pro Pro Thr Phe Ser Pro Ala Leu Leu Val Val Thr Glu Gly Asp
35 40 45
Asn Ala Thr Phe Thr Cys Ser Phe Ser Asn Thr Ser Glu Ser Phe Val
50 55 60
Leu Asn Trp Tyr Arg Met Ser Pro Ser Asn Gln Thr Asp Lys Leu Ala
65 70 75 80
Ala Phe Pro Glu Asp Arg Ser Gln Pro Gly Gln Asp Cys Arg Phe Arg
85 90 95
Val Thr Gln Leu Pro Asn Gly Arg Asp Phe His Met Ser Val Val Arg
100 105 110
Ala Arg Arg Asn Asp Ser Gly Thr Tyr Leu Cys Gly Ala Ile Ser Leu
115 120 125
Ala Pro Lys Ala Gln Ile Lys Glu Ser Leu Arg Ala Glu Leu Arg Val
130 135 140
Thr Glu Arg Arg Ala Glu Val Pro Thr Ala His Pro Ser Pro Ser Pro
145 150 155 160
Arg Pro Ala Gly Gln Phe Gln
165
<210> 2
<211> 242
<212> PRT
<213> Homo sapiens
<400> 2
Met Gly His Thr Arg Arg Gln Gly Thr Ser Pro Ser Lys Cys Pro Tyr
1 5 10 15
Leu Asn Phe Phe Gln Leu Leu Val Leu Ala Gly Leu Ser His Phe Cys
20 25 30
Ser Gly Val Ile His Val Thr Lys Glu Val Lys Glu Val Ala Thr Leu
35 40 45
Ser Cys Gly His Asn Val Ser Val Glu Glu Leu Ala Gln Thr Arg Ile
50 55 60
Tyr Trp Gln Lys Glu Lys Lys Met Val Leu Thr Met Met Ser Gly Asp
65 70 75 80
Met Asn Ile Trp Pro Glu Tyr Lys Asn Arg Thr Ile Phe Asp Ile Thr
85 90 95
Asn Asn Leu Ser Ile Val Ile Leu Ala Leu Arg Pro Ser Asp Glu Gly
100 105 110
Thr Tyr Glu Cys Val Val Leu Lys Tyr Glu Lys Asp Ala Phe Lys Arg
115 120 125
Glu His Leu Ala Glu Val Thr Leu Ser Val Lys Ala Asp Phe Pro Thr
130 135 140
Pro Ser Ile Ser Asp Phe Glu Ile Pro Thr Ser Asn Ile Arg Arg Ile
145 150 155 160
Ile Cys Ser Thr Ser Gly Gly Phe Pro Glu Pro His Leu Ser Trp Leu
165 170 175
Glu Asn Gly Glu Glu Leu Asn Ala Ile Asn Thr Thr Val Ser Gln Asp
180 185 190
Pro Glu Thr Glu Leu Tyr Ala Val Ser Ser Lys Leu Asp Phe Asn Met
195 200 205
Thr Thr Asn His Ser Phe Met Cys Leu Ile Lys Tyr Gly His Leu Arg
210 215 220
Val Asn Gln Thr Phe Asn Trp Asn Thr Thr Lys Gln Glu His Phe Pro
225 230 235 240
Asp Asn
<210> 3
<211> 15
<212> PRT
<213> Artificial Sequence (Artificial Sequence)
<400> 3
Glu Pro Lys Ser Cys Asp Lys Thr His Thr Cys Pro Pro Cys Pro
1 5 10 15
<210> 4
<211> 217
<212> PRT
<213> Homo sapiens
<400> 4
Ala Pro Glu Leu Leu Gly Gly Pro Ser Val Phe Leu Phe Pro Pro Lys
1 5 10 15
Pro Lys Asp Thr Leu Met Ile Ser Arg Thr Pro Glu Val Thr Cys Val
20 25 30
Val Val Asp Val Ser His Glu Asp Pro Glu Val Lys Phe Asn Trp Tyr
35 40 45
Val Asp Gly Val Glu Val His Asn Ala Lys Thr Lys Pro Arg Glu Glu
50 55 60
Gln Tyr Asn Ser Thr Tyr Arg Val Val Ser Val Leu Thr Val Leu His
65 70 75 80
Gln Asp Trp Leu Asn Gly Lys Glu Tyr Lys Cys Lys Val Ser Asn Lys
85 90 95
Ala Leu Pro Ala Pro Ile Glu Lys Thr Ile Ser Lys Ala Lys Gly Gln
100 105 110
Pro Arg Glu Pro Gln Val Tyr Thr Leu Pro Pro Ser Arg Asp Glu Leu
115 120 125
Thr Lys Asn Gln Val Ser Leu Thr Cys Leu Val Lys Gly Phe Tyr Pro
130 135 140
Ser Asp Ile Ala Val Glu Trp Glu Ser Asn Gly Gln Pro Glu Asn Asn
145 150 155 160
Tyr Lys Thr Thr Pro Pro Val Leu Asp Ser Asp Gly Ser Phe Phe Leu
165 170 175
Tyr Ser Lys Leu Thr Val Asp Lys Ser Arg Trp Gln Gln Gly Asn Val
180 185 190
Phe Ser Cys Ser Val Met His Glu Ala Leu His Asn His Tyr Thr Gln
195 200 205
Lys Ser Leu Ser Leu Ser Pro Gly Lys
210 215
<210> 5
<211> 646
<212> PRT
<213> Homo sapiens
<400> 5
Met Thr Ser His Tyr Val Ile Ala Ile Phe Ala Leu Met Ser Ser Cys
1 5 10 15
Leu Ala Thr Ala Gly Pro Glu Pro Gly Ala Leu Cys Glu Leu Ser Pro
20 25 30
Val Ser Ala Ser His Pro Val Gln Ala Leu Met Glu Ser Phe Thr Val
35 40 45
Leu Ser Gly Cys Ala Ser Arg Gly Thr Thr Gly Leu Pro Gln Glu Val
50 55 60
His Val Leu Asn Leu Arg Thr Ala Gly Gln Gly Pro Gly Gln Leu Gln
65 70 75 80
Arg Glu Val Thr Leu His Leu Asn Pro Ile Ser Ser Val His Ile His
85 90 95
His Lys Ser Val Val Phe Leu Leu Asn Ser Pro His Pro Leu Val Trp
100 105 110
His Leu Lys Thr Glu Arg Leu Ala Thr Gly Val Ser Arg Leu Phe Leu
115 120 125
Val Ser Glu Gly Ser Val Val Gln Phe Ser Ser Ala Asn Phe Ser Leu
130 135 140
Thr Ala Glu Thr Glu Glu Arg Asn Phe Pro His Gly Asn Glu His Leu
145 150 155 160
Leu Asn Trp Ala Arg Lys Glu Tyr Gly Ala Val Thr Ser Phe Thr Glu
165 170 175
Leu Lys Ile Ala Arg Asn Ile Tyr Ile Lys Val Gly Glu Asp Gln Val
180 185 190
Phe Pro Pro Lys Cys Asn Ile Gly Lys Asn Phe Leu Ser Leu Asn Tyr
195 200 205
Leu Ala Glu Tyr Leu Gln Pro Lys Ala Ala Glu Gly Cys Val Met Ser
210 215 220
Ser Gln Pro Gln Asn Glu Glu Val His Ile Ile Glu Leu Ile Thr Pro
225 230 235 240
Asn Ser Asn Pro Tyr Ser Ala Phe Gln Val Asp Ile Thr Ile Asp Ile
245 250 255
Arg Pro Ser Gln Glu Asp Leu Glu Val Val Lys Asn Leu Ile Leu Ile
260 265 270
Leu Lys Cys Lys Lys Ser Val Asn Trp Val Ile Lys Ser Phe Asp Val
275 280 285
Lys Gly Ser Leu Lys Ile Ile Ala Pro Asn Ser Ile Gly Phe Gly Lys
290 295 300
Glu Ser Glu Arg Ser Met Thr Met Thr Lys Ser Ile Arg Asp Asp Ile
305 310 315 320
Pro Ser Thr Gln Gly Asn Leu Val Lys Trp Ala Leu Asp Asn Gly Tyr
325 330 335
Ser Pro Ile Thr Ser Tyr Thr Met Ala Pro Val Ala Asn Arg Phe His
340 345 350
Leu Arg Leu Glu Asn Asn Ala Glu Glu Met Gly Asp Glu Glu Val His
355 360 365
Thr Ile Pro Pro Glu Leu Arg Ile Leu Leu Asp Pro Gly Ala Leu Pro
370 375 380
Ala Leu Gln Asn Pro Pro Ile Arg Gly Gly Glu Gly Gln Asn Gly Gly
385 390 395 400
Leu Pro Phe Pro Phe Pro Asp Ile Ser Arg Arg Val Trp Asn Glu Glu
405 410 415
Gly Glu Asp Gly Leu Pro Arg Pro Lys Asp Pro Val Ile Pro Ser Ile
420 425 430
Gln Leu Phe Pro Gly Leu Arg Glu Pro Glu Glu Val Gln Gly Ser Val
435 440 445
Asp Ile Ala Leu Ser Val Lys Cys Asp Asn Glu Lys Met Ile Val Ala
450 455 460
Val Glu Lys Asp Ser Phe Gln Ala Ser Gly Tyr Ser Gly Met Asp Val
465 470 475 480
Thr Leu Leu Asp Pro Thr Cys Lys Ala Lys Met Asn Gly Thr His Phe
485 490 495
Val Leu Glu Ser Pro Leu Asn Gly Cys Gly Thr Arg Pro Arg Trp Ser
500 505 510
Ala Leu Asp Gly Val Val Tyr Tyr Asn Ser Ile Val Ile Gln Val Pro
515 520 525
Ala Leu Gly Asp Ser Ser Gly Trp Pro Asp Gly Tyr Glu Asp Leu Glu
530 535 540
Ser Gly Asp Asn Gly Phe Pro Gly Asp Met Asp Glu Gly Asp Ala Ser
545 550 555 560
Leu Phe Thr Arg Pro Glu Ile Val Val Phe Asn Cys Ser Leu Gln Gln
565 570 575
Val Arg Asn Pro Ser Ser Phe Gln Glu Gln Pro His Gly Asn Ile Thr
580 585 590
Phe Asn Met Glu Leu Tyr Asn Thr Asp Leu Phe Leu Val Pro Ser Gln
595 600 605
Gly Val Phe Ser Val Pro Glu Asn Gly His Val Tyr Val Glu Val Ser
610 615 620
Val Thr Lys Ala Glu Gln Glu Leu Gly Phe Ala Ile Gln Thr Cys Phe
625 630 635 640
Ile Ser Pro Tyr Ser Asn
645
<210> 6
<211> 622
<212> PRT
<213> Homo sapiens
<400> 6
Met Gln Ile Pro Gln Ala Pro Trp Pro Val Val Trp Ala Val Leu Gln
1 5 10 15
Leu Gly Trp Arg Pro Gly Trp Phe Leu Asp Ser Pro Asp Arg Pro Trp
20 25 30
Asn Pro Pro Thr Phe Ser Pro Ala Leu Leu Val Val Thr Glu Gly Asp
35 40 45
Asn Ala Thr Phe Thr Cys Ser Phe Ser Asn Thr Ser Glu Ser Phe Val
50 55 60
Leu Asn Trp Tyr Arg Met Ser Pro Ser Asn Gln Thr Asp Lys Leu Ala
65 70 75 80
Ala Phe Pro Glu Asp Arg Ser Gln Pro Gly Gln Asp Cys Arg Phe Arg
85 90 95
Val Thr Gln Leu Pro Asn Gly Arg Asp Phe His Met Ser Val Val Arg
100 105 110
Ala Arg Arg Asn Asp Ser Gly Thr Tyr Leu Cys Gly Ala Ile Ser Leu
115 120 125
Ala Pro Lys Ala Gln Ile Lys Glu Ser Leu Arg Ala Glu Leu Arg Val
130 135 140
Thr Glu Arg Arg Ala Glu Val Pro Thr Ala His Pro Ser Pro Ser Pro
145 150 155 160
Arg Pro Ala Gly Gln Phe Gln Glu Pro Lys Ser Cys Asp Lys Thr His
165 170 175
Thr Cys Pro Pro Cys Pro Ala Pro Glu Leu Leu Gly Gly Pro Ser Val
180 185 190
Phe Leu Phe Pro Pro Lys Pro Lys Asp Thr Leu Met Ile Ser Arg Thr
195 200 205
Pro Glu Val Thr Cys Val Val Val Asp Val Ser His Glu Asp Pro Glu
210 215 220
Val Lys Phe Asn Trp Tyr Val Asp Gly Val Glu Val His Asn Ala Lys
225 230 235 240
Thr Lys Pro Arg Glu Glu Gln Tyr Asn Ser Thr Tyr Arg Val Val Ser
245 250 255
Val Leu Thr Val Leu His Gln Asp Trp Leu Asn Gly Lys Glu Tyr Lys
260 265 270
Cys Lys Val Ser Asn Lys Ala Leu Pro Ala Pro Ile Glu Lys Thr Ile
275 280 285
Ser Lys Ala Lys Gly Gln Pro Arg Glu Pro Gln Val Tyr Thr Leu Pro
290 295 300
Pro Ser Arg Asp Glu Leu Thr Lys Asn Gln Val Ser Leu Thr Cys Leu
305 310 315 320
Val Lys Gly Phe Tyr Pro Ser Asp Ile Ala Val Glu Trp Glu Ser Asn
325 330 335
Gly Gln Pro Glu Asn Asn Tyr Lys Thr Thr Pro Pro Val Leu Asp Ser
340 345 350
Asp Gly Ser Phe Phe Leu Tyr Ser Lys Leu Thr Val Asp Lys Ser Arg
355 360 365
Trp Gln Gln Gly Asn Val Phe Ser Cys Ser Val Met His Glu Ala Leu
370 375 380
His Asn His Tyr Thr Gln Lys Ser Leu Ser Leu Ser Pro Gly Lys Glu
385 390 395 400
Pro Lys Ser Cys Asp Lys Thr His Thr Cys Pro Pro Cys Pro Val Ile
405 410 415
His Val Thr Lys Glu Val Lys Glu Val Ala Thr Leu Ser Cys Gly His
420 425 430
Asn Val Ser Val Glu Glu Leu Ala Gln Thr Arg Ile Tyr Trp Gln Lys
435 440 445
Glu Lys Lys Met Val Leu Thr Met Met Ser Gly Asp Met Asn Ile Trp
450 455 460
Pro Glu Tyr Lys Asn Arg Thr Ile Phe Asp Ile Thr Asn Asn Leu Ser
465 470 475 480
Ile Val Ile Leu Ala Leu Arg Pro Ser Asp Glu Gly Thr Tyr Glu Cys
485 490 495
Val Val Leu Lys Tyr Glu Lys Asp Ala Phe Lys Arg Glu His Leu Ala
500 505 510
Glu Val Thr Leu Ser Val Lys Ala Asp Phe Pro Thr Pro Ser Ile Ser
515 520 525
Asp Phe Glu Ile Pro Thr Ser Asn Ile Arg Arg Ile Ile Cys Ser Thr
530 535 540
Ser Gly Gly Phe Pro Glu Pro His Leu Ser Trp Leu Glu Asn Gly Glu
545 550 555 560
Glu Leu Asn Ala Ile Asn Thr Thr Val Ser Gln Asp Pro Glu Thr Glu
565 570 575
Leu Tyr Ala Val Ser Ser Lys Leu Asp Phe Asn Met Thr Thr Asn His
580 585 590
Ser Phe Met Cys Leu Ile Lys Tyr Gly His Leu Arg Val Asn Gln Thr
595 600 605
Phe Asn Trp Asn Thr Thr Lys Gln Glu His Phe Pro Asp Asn
610 615 620
<210> 7
<211> 501
<212> RNA
<213> Artificial Sequence (Artificial Sequence)
<400> 7
augcagaucc cacaggcgcc cuggccaguc gucugggcgg ugcuacaacu gggcuggcgg 60
ccaggauggu ucuuagacuc cccagacagg cccuggaacc cccccaccuu cuccccagcc 120
cugcucgugg ugaccgaagg ggacaacgcc accuucaccu gcagcuucuc caacacaucg 180
gagagcuucg ugcuaaacug guaccgcaug agccccagca accagacgga caagcuggcc 240
gccuuccccg aggaccgcag ccagcccggc caggacugcc gcuuccgugu cacacaacug 300
cccaacgggc gugacuucca caugagcgug gucagggccc ggcgcaauga cagcggcacc 360
uaccucugug gggccaucuc ccuggccccc aaggcgcaga ucaaagagag ccugcgggca 420
gagcucaggg ugacagagag aagggcagaa gugcccacag cccaccccag ccccucaccc 480
aggccagccg gccaguucca a 501
<210> 8
<211> 726
<212> RNA
<213> Artificial Sequence (Artificial Sequence)
<400> 8
augggccaca cacggaggca gggaacauca ccauccaagu guccauaccu caauuucuuu 60
cagcucuugg ugcuggcugg ucuuucucac uucuguucag guguuaucca cgugaccaag 120
gaagugaaag aaguggcaac gcuguccugu ggucacaaug uuucuguuga agagcuggca 180
caaacucgca ucuacuggca aaaggagaag aaaauggugc ugacuaugau gucuggggac 240
augaauauau ggcccgagua caagaaccgg accaucuuug auaucacuaa uaaccucucc 300
auugugaucc uggcucugcg cccaucugac gagggcacau acgagugugu uguucugaag 360
uaugaaaaag acgcuuucaa gcgggaacac cuggcugaag ugacguuauc agucaaagcu 420
gacuucccua caccuaguau aucugacuuu gaaauuccaa cuucuaauau uagaaggaua 480
auuugcucaa ccucuggagg uuuuccagag ccucaccucu ccugguugga aaauggagaa 540
gaauuaaaug ccaucaacac aacaguuucc caagauccug aaacugagcu cuaugcuguu 600
agcagcaaac uggauuucaa uaugacaacc aaccacagcu ucaugugucu caucaaguau 660
ggacauuuaa gagugaauca gaccuucaac uggaauacaa ccaagcaaga gcauuuuccu 720
gauaac 726
<210> 9
<211> 45
<212> RNA
<213> Artificial Sequence (Artificial Sequence)
<400> 9
gagcccaaau cuugugacaa aacucacaca ugcccaccgu gccca 45
<210> 10
<211> 651
<212> RNA
<213> Artificial Sequence (Artificial Sequence)
<400> 10
gcaccugaac uccugggggg accgucaguc uuccucuucc ccccaaaacc caaggacacc 60
cucaugaucu cccggacccc ugaggucaca ugcguggugg uggacgugag ccacgaagac 120
ccugagguca aguucaacug guacguggac ggcguggagg ugcauaaugc caagacaaag 180
ccgcgggagg agcaguacaa cagcacguac cgugugguca gcguccucac cguccugcac 240
caggacuggc ugaauggcaa ggaguacaag ugcaaggucu ccaacaaagc ccucccagcc 300
cccaucgaga aaaccaucuc caaagccaaa gggcagcccc gagaaccaca gguguacacc 360
cugcccccau cccgggauga gcugaccaag aaccagguca gccugaccug ccuggucaaa 420
ggcuucuauc ccagcgacau cgccguggag ugggagagca augggcagcc ggagaacaac 480
uacaagacca cgccucccgu gcuggacucc gacggcuccu ucuuccucua cagcaagcuc 540
accguggaca agagcaggug gcagcagggg aacgucuucu caugcuccgu gaugcaugag 600
gcucugcaca accacuacac gcagaagagc cucucccugu cuccggguaa a 651
<210> 11
<211> 2004
<212> RNA
<213> Artificial Sequence (Artificial Sequence)
<400> 11
gcaccugaac uccugggggg accgucaguc uuccucuucc ccccaaaacc caaggacacc 60
cucaugaucu cccggacccc ugaggucaca ugcguggugg uggacgugag ccacgaagac 120
acagcaggac cagagccagg cgcccugugu gaacucagcc caguguccgc uucucaucca 180
gugcaggccc ugauggagag cuucacagug cugagcggcu gcgccagcag aggcacaaca 240
ggacugccuc aggaggugca cgugcugaac cugagaaccg caggacaggg accaggacag 300
cugcagaggg aagugacccu gcaccugaac cccaucagca gcgugcacau ccaccacaag 360
agcguggugu uccugcugaa cagcccucac ccacuggucu ggcaccugaa gaccgagaga 420
cuggcuacag gcguguccag acuguuccug guguccgaag gcagcguggu gcaguuuagc 480
agcgcuaacu ucagccugac cgccgaaacc gaggagagaa acuuccccca cggcaacgag 540
caccugcuga auugggccag gaaggaguac ggagccguga ccagcuucac cgagcugaag 600
aucgcccgga acaucuacau caaggucggc gaggaccagg uguucccacc caagugcaac 660
aucggcaaga acuuccugag ccugaacuac cuggccgagu aucugcagcc uaaagccgca 720
gagggcugcg ugaugucuag ccagccccag aacgaggagg ugcacaucau cgagcugauc 780
acccccaaca gcaaccccua cagcgccuuc cagguggaca ucaccaucga cauccggccu 840
agccaggagg aucuggaggu cgugaagaac cugauccuga uccucaagug caagaagagc 900
gugaauuggg ucaucaagag cuucgacgug aagggcagcc ugaagaucau cgcccccaac 960
agcaucggcu uuggcaaaga gagcgagcgg agcaugacca ugaccaagag cauccgggac 1020
gacauccccu cuacacaggg caaccucguc aagugggcac uggauaacgg cuacagcccu 1080
aucaccagcu acaccauggc cccaguggcc aacagauucc accugcggcu ggagaacaac 1140
gccgaagaga ugggcgacga ggaagugcac accaucccuc ccgagcugag aauccugcug 1200
gaccccggcg cccugccagc ucugcagaau ccuccuauua gaggcggcga gggacagaac 1260
ggaggacugc cuuucccuuu ccccgacauc agcaggagag uguggaacga ggagggcgaa 1320
gacggacugc cuagaccuaa ggaccccgug aucccuagca uccagcuguu cccaggccug 1380
agagagccag aggaagugca gggaagcgug gacaucgcuc ugagcgucaa gugcgacaac 1440
gagaagauga ucguggccgu ggagaaggac agcuuccagg cuagcggaua cagcggaaug 1500
gacgugaccc ugcuggaccc uacuugcaag gccaagauga acggcaccca cuucgugcug 1560
gagucccccc ugaacgguug cggcacaaga ccuaggugga gcgcucugga cggaguggug 1620
uacuacaacu ccaucgugau ccaggugccc gcucugggag auucuagcgg uuggccagac 1680
ggcuacgagg aucuggagag cggagacaac ggcuucccag gcgauaugga cgagggagac 1740
gcuucucugu ucaccaggcc cgagaucgug guguucaauu gcagccugca gcagguccgc 1800
aacccuucua gcuuccagga gcagccucac ggcaacauca ccuucaacau ggagcuguac 1860
aacaccgacc uguuccuggu gccaucacag ggaguguuca gcgugcccga gaacggacac 1920
guguacgugg agguguccgu gaccaaggca gaacaggagc ugggcuucgc cauccagacu 1980
ugcuucauca gccccuacag caac 2004
<210> 13
<211> 60
<212> RNA
<213> Xenopus laevis bufonid toad smooth (Xenopus laevis)
<400> 13
aagcuucuug uucuuuuugc agaagcucag aauaaacgcu caacuuuggc agaucugaac 60
<210> 12
<211> 88
<212> RNA
<213> Homo sapiens
<400> 12
gcuggagccu cgguagccgu uccuccugcc cgcugggccu cccaacgggc ccuccucccc 60
uccuugcacc ggcccuuccu ggucuuug 88
<210> 20
<211> 2005
<212> RNA
<213> Artificial Sequence (Artificial Sequence)
<400> 20
gagaccggcc ucgagcagcu gaagcuugca ugccugcagg ucgacucuag agccaccaug 60
agggcccugu gggugcuggg ccucugcugc guccugcuga ccuucggguc ggucagagcu 120
gacgaugaag uugaugugau ggagagccgg ggccggcggu gccccgaaau gaucagcgug 180
cugggaccaa uuuccggcca ugugcucaaa gccguguuua gccggggaga cacucccguc 240
cugccccaug aaaccagacu gcuccagacc ggcauccacg ugagagugag ccaacccucc 300
cugauccucg ucagccaaua cacccccgac agcacacccu gccaucgggg cgacaaucag 360
cugcaggugc agcacacuua uuucaccgga agcgaggugg agaacgucag cgugaacgug 420
cacaacccca ccgggcggag cauuugcccc ucccaggagc ccauguccau cuacguguac 480
gcccugcccc ugaagaugcu gaacauccca uccaucaacg ugcaccacua uccuuccgcc 540
gccgaacgga agcaucggca ccuccccguc gccgacgccg ugauccacgc cagcggcaag 600
caaauguggc aggcccggcu gaccgugagc ggccuggccu ggacccggca gcaaaaccag 660
uggaaggagc cugacgugua cuacacaagc gccuucgucu ucccaaccaa ggacgucgca 720
cugcggcacg uggugugcgc ccacgagcuc gucuguucca uggaaaacac cagagccacc 780
aaaaugcagg ugauuggcga ccaguacgug aagguguacc uggaguccuu cugcgaggac 840
gugcccuccg ggaagcucuu caugcacgug acccugggca gcgacgugga ggaggaccuc 900
accaugaccc ggaaccccca gcccuuuaug cggccccacg agcggaacgg cuucaccguc 960
cuguguccca agaacaugau caucaagccc ggcaagauca gccacaucau gcuggacgug 1020
gcuuucacca gccacgagca cuucgggcug cucugcccca aguccauccc cggccucagc 1080
aucagcggca aucuccucau gaacggccag cagaucuucc uggaggugca agccauccgg 1140
gagaccgucg agcugcggca guacgauccc guggccgccc uguucuucuu cgacaucgac 1200
cugcuccugc agcggggccc ccaauacagc gagcacccca ccuucaccag ccaguaccgg 1260
auucagggca agcucgagua ccggcacacc ugggaccggc acgacgaggg cgccgcccag 1320
ggagacgacg acguguggac cagcggcucc gacagcgacg aggagcucgu gacaacugag 1380
cggaagaccc cccgggucac cggcgggggc gccauggcca gcgccagcac cuccgccggc 1440
cggaaacgga agagcgccag cagcgcuacc gccugcaccg ccggcgugau gacacggggg 1500
cggcugaagg ccgagagcac cguggccccc gaggaggaca ccgacgaaga cuccgacaac 1560
gaaauccaca accccgccgu cuucaccugg ccccccuggc aagccggcau ccucgcccgg 1620
aaccuggucc ccauggucgc caccgugcag gggcaaaauc ugaaguacca ggaguucuuu 1680
ugggacgcaa acgacaucua ccggaucuuc gccgagcugg agggcgugug gcagcccgcc 1740
gcacagccca agagacggcg gcaccggcag gacgcccugc ccggcccaug caucgccagc 1800
acacccaaga agcauagagg ccugaucccc aucgcugugg guggugcccu ggcggggcug 1860
guccucaucg uccucaucgc cuaccucguc ggcaggaaga ggagucacgc aggcuaccag 1920
acuaucuagg aauucuuaau uaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1980
aaaaaaaaaa aaaaaaaaaa aaaaa 2005
<210> 14
<211> 1200
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 14
atgcagatcc cacaggcgcc ctggccagtc gtctgggcgg tgctacaact gggctggcgg 60
ccaggatggt tcttagactc cccagacagg ccctggaacc cccccacctt ctccccagcc 120
ctgctcgtgg tgaccgaagg ggacaacgcc accttcacct gcagcttctc caacacatcg 180
gagagcttcg tgctaaactg gtaccgcatg agccccagca accagacgga caagctggcc 240
gccttccccg aggaccgcag ccagcccggc caggactgcc gcttccgtgt cacacaactg 300
cccaacgggc gtgacttcca catgagcgtg gtcagggccc ggcgcaatga cagcggcacc 360
tacctctgtg gggccatctc cctggccccc aaggcgcaga tcaaagagag cctgcgggca 420
gagctcaggg tgacagagag aagggcagaa gtgcccacag cccaccccag cccctcaccc 480
aggccagccg gccagttcca agagcccaaa tcttgtgaca aaactcacac atgcccaccg 540
tgcccagcac ctgaactcct ggggggaccg tcagtcttcc tcttcccccc aaaacccaag 600
gacaccctca tgatctcccg gacccctgag gtcacatgcg tggtggtgga cgtgagccac 660
gaagaccctg aggtcaagtt caactggtac gtggacggcg tggaggtgca taatgccaag 720
acaaagccgc gggaggagca gtacaacagc acgtaccgtg tggtcagcgt cctcaccgtc 780
ctgcaccagg actggctgaa tggcaaggag tacaagtgca aggtctccaa caaagccctc 840
ccagccccca tcgagaaaac catctccaaa gccaaagggc agccccgaga accacaggtg 900
tacaccctgc ccccatcccg ggatgagctg accaagaacc aggtcagcct gacctgcctg 960
gtcaaaggct tctatcccag cgacatcgcc gtggagtggg agagcaatgg gcagccggag 1020
aacaactaca agaccacgcc tcccgtgctg gactccgacg gctccttctt cctctacagc 1080
aagctcaccg tggacaagag caggtggcag caggggaacg tcttctcatg ctccgtgatg 1140
catgaggctc tgcacaacca ctacacgcag aagagcctct ccctgtctcc gggtaaatga 1200
<210> 15
<211> 1425
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 15
atgggccaca cacggaggca gggaacatca ccatccaagt gtccatacct caatttcttt 60
cagctcttgg tgctggctgg tctttctcac ttctgttcag gtgttatcca cgtgaccaag 120
gaagtgaaag aagtggcaac gctgtcctgt ggtcacaatg tttctgttga agagctggca 180
caaactcgca tctactggca aaaggagaag aaaatggtgc tgactatgat gtctggggac 240
atgaatatat ggcccgagta caagaaccgg accatctttg atatcactaa taacctctcc 300
attgtgatcc tggctctgcg cccatctgac gagggcacat acgagtgtgt tgttctgaag 360
tatgaaaaag acgctttcaa gcgggaacac ctggctgaag tgacgttatc agtcaaagct 420
gacttcccta cacctagtat atctgacttt gaaattccaa cttctaatat tagaaggata 480
atttgctcaa cctctggagg ttttccagag cctcacctct cctggttgga aaatggagaa 540
gaattaaatg ccatcaacac aacagtttcc caagatcctg aaactgagct ctatgctgtt 600
agcagcaaac tggatttcaa tatgacaacc aaccacagct tcatgtgtct catcaagtat 660
ggacatttaa gagtgaatca gaccttcaac tggaatacaa ccaagcaaga gcattttcct 720
gataacgagc ccaaatcttg tgacaaaact cacacatgcc caccgtgccc agcacctgaa 780
ctcctggggg gaccgtcagt cttcctcttc cccccaaaac ccaaggacac cctcatgatc 840
tcccggaccc ctgaggtcac atgcgtggtg gtggacgtga gccacgaaga ccctgaggtc 900
aagttcaact ggtacgtgga cggcgtggag gtgcataatg ccaagacaaa gccgcgggag 960
gagcagtaca acagcacgta ccgtgtggtc agcgtcctca ccgtcctgca ccaggactgg 1020
ctgaatggca aggagtacaa gtgcaaggtc tccaacaaag ccctcccagc ccccatcgag 1080
aaaaccatct ccaaagccaa agggcagccc cgagaaccac aggtgtacac cctgccccca 1140
tcccgggatg agctgaccaa gaaccaggtc agcctgacct gcctggtcaa aggcttctat 1200
cccagcgaca tcgccgtgga gtgggagagc aatgggcagc cggagaacaa ctacaagacc 1260
acgcctcccg tgctggactc cgacggctcc ttcttcctct acagcaagct caccgtggac 1320
aagagcaggt ggcagcaggg gaacgtcttc tcatgctccg tgatgcatga ggctctgcac 1380
aaccactaca cgcagaagag cctctccctg tctccgggta aatga 1425
<210> 16
<211> 2637
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 16
atgacttccc attatgtgat tgccatcttt gccctgatga gctcctgttt agccactgca 60
ggtccagagc ctggtgcact gtgtgaactg tcacctgtca gtgcctccca tcctgtccag 120
gccttgatgg agagcttcac tgttttgtca ggctgtgcca gcagaggcac aactgggctg 180
ccacaggagg tgcatgtcct gaatctccgc actgcgggcc aggggcctgg ccagctacag 240
agagaggtca cacttcacct gaatcccatc tcctcagtcc acatccacca caagtctgtt 300
gtgttcctgc tcaactcccc acaccccctg gtgtggcatc tgaagacaga gagacttgcc 360
actggggtct ccagactgtt tttggtgtct gagggttctg tggtccagtt ttcatcagca 420
aacttctcct tgacagcaga aacagaagaa aggaacttcc cccatggaaa tgaacatctg 480
ttaaattggg cccgaaaaga gtatggagca gttacttcat tcaccgaact caagatagca 540
agaaacattt atattaaagt gggggaagat caagtgttcc ctccaaagtg caacataggg 600
aagaattttc tctcactcaa ttaccttgct gagtaccttc aacccaaagc agcagaaggg 660
tgtgtgatgt ccagccagcc ccagaatgag gaagtacaca tcatcgagct aatcaccccc 720
aactctaacc cctacagtgc tttccaggtg gatataacaa ttgatataag accttctcaa 780
gaggatcttg aagtggtcaa aaatctcatc ctgatcttga agtgcaaaaa gtctgtcaac 840
tgggtgatca aatcttttga tgttaaggga agcctgaaaa ttattgctcc taacagtatt 900
ggctttggaa aagagagtga aagatctatg acaatgacca aatcaataag agatgacatt 960
ccttcaaccc aagggaatct ggtgaagtgg gctttggaca atggctatag tccaataact 1020
tcatacacaa tggctcctgt ggctaataga tttcatcttc ggcttgaaaa taatgcagag 1080
gagatgggag atgaggaagt ccacactatt cctcctgagc tacggatcct gctggaccct 1140
ggtgccctgc ctgccctgca gaacccgccc atccggggag gggaaggcca aaatggaggc 1200
cttccgtttc ctttcccaga tatttccagg agagtctgga atgaagaggg agaagatggg 1260
ctccctcggc caaaggaccc tgtcattccc agcatacaac tgtttcctgg tctcagagag 1320
ccagaagagg tgcaagggag cgtggatatt gccctgtctg tcaaatgtga caatgagaag 1380
atgatcgtgg ctgtagaaaa agattctttt caggccagtg gctactcggg gatggacgtc 1440
accctgttgg atcctacctg caaggccaag atgaatggca cacactttgt tttggagtct 1500
cctctgaatg gctgcggtac tcggccccgg tggtcagccc ttgatggtgt ggtctactat 1560
aactccattg tgatacaggt tccagccctt ggggacagta gtggttggcc agatggttat 1620
gaagatctgg agtcaggtga taatggattt ccgggagata tggatgaagg agatgcttcc 1680
ctgttcaccc gacctgaaat cgtggtgttt aattgcagcc ttcagcaggt gaggaacccc 1740
agcagcttcc aggaacagcc ccacggaaac atcaccttca acatggagct atacaacact 1800
gacctctttt tggtgccctc ccagggcgtc ttctctgtgc cagagaatgg acacgtttat 1860
gttgaggtat ctgttactaa ggctgaacaa gaactgggat ttgccatcca aacgtgcttt 1920
atctctccat attcgaacga gcccaaatct tgtgacaaaa ctcacacatg cccaccgtgc 1980
ccagcacctg aactcctggg gggaccgtca gtcttcctct tccccccaaa acccaaggac 2040
accctcatga tctcccggac ccctgaggtc acatgcgtgg tggtggacgt gagccacgaa 2100
gaccctgagg tcaagttcaa ctggtacgtg gacggcgtgg aggtgcataa tgccaagaca 2160
aagccgcggg aggagcagta caacagcacg taccgtgtgg tcagcgtcct caccgtcctg 2220
caccaggact ggctgaatgg caaggagtac aagtgcaagg tctccaacaa agccctccca 2280
gcccccatcg agaaaaccat ctccaaagcc aaagggcagc cccgagaacc acaggtgtac 2340
accctgcccc catcccggga tgagctgacc aagaaccagg tcagcctgac ctgcctggtc 2400
aaaggcttct atcccagcga catcgccgtg gagtgggaga gcaatgggca gccggagaac 2460
aactacaaga ccacgcctcc cgtgctggac tccgacggct ccttcttcct ctacagcaag 2520
ctcaccgtgg acaagagcag gtggcagcag gggaacgtct tctcatgctc cgtgatgcat 2580
gaggctctgc acaaccacta cacgcagaag agcctctccc tgtctccggg taaatga 2637
<210> 17
<211> 1869
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 17
atgcagatcc cacaggcgcc ctggccagtc gtctgggcgg tgctacaact gggctggcgg 60
ccaggatggt tcttagactc cccagacagg ccctggaacc cccccacctt ctccccagcc 120
ctgctcgtgg tgaccgaagg ggacaacgcc accttcacct gcagcttctc caacacatcg 180
gagagcttcg tgctaaactg gtaccgcatg agccccagca accagacgga caagctggcc 240
gccttccccg aggaccgcag ccagcccggc caggactgcc gcttccgtgt cacacaactg 300
cccaacgggc gtgacttcca catgagcgtg gtcagggccc ggcgcaatga cagcggcacc 360
tacctctgtg gggccatctc cctggccccc aaggcgcaga tcaaagagag cctgcgggca 420
gagctcaggg tgacagagag aagggcagaa gtgcccacag cccaccccag cccctcaccc 480
aggccagccg gccagttcca agagcccaaa tcttgtgaca aaactcacac atgcccaccg 540
tgcccagcac ctgaactcct ggggggaccg tcagtcttcc tcttcccccc aaaacccaag 600
gacaccctca tgatctcccg gacccctgag gtcacatgcg tggtggtgga cgtgagccac 660
gaagaccctg aggtcaagtt caactggtac gtggacggcg tggaggtgca taatgccaag 720
acaaagccgc gggaggagca gtacaacagc acgtaccgtg tggtcagcgt cctcaccgtc 780
ctgcaccagg actggctgaa tggcaaggag tacaagtgca aggtctccaa caaagccctc 840
ccagccccca tcgagaaaac catctccaaa gccaaagggc agccccgaga accacaggtg 900
tacaccctgc ccccatcccg ggatgagctg accaagaacc aggtcagcct gacctgcctg 960
gtcaaaggct tctatcccag cgacatcgcc gtggagtggg agagcaatgg gcagccggag 1020
aacaactaca agaccacgcc tcccgtgctg gactccgacg gctccttctt cctctacagc 1080
aagctcaccg tggacaagag caggtggcag caggggaacg tcttctcatg ctccgtgatg 1140
catgaggctc tgcacaacca ctacacgcag aagagcctct ccctgtctcc gggtaaagag 1200
cccaaatctt gtgacaaaac tcacacatgc ccaccgtgcc cagttatcca cgtgaccaag 1260
gaagtgaaag aagtggcaac gctgtcctgt ggtcacaatg tttctgttga agagctggca 1320
caaactcgca tctactggca aaaggagaag aaaatggtgc tgactatgat gtctggggac 1380
atgaatatat ggcccgagta caagaaccgg accatctttg atatcactaa taacctctcc 1440
attgtgatcc tggctctgcg cccatctgac gagggcacat acgagtgtgt tgttctgaag 1500
tatgaaaaag acgctttcaa gcgggaacac ctggctgaag tgacgttatc agtcaaagct 1560
gacttcccta cacctagtat atctgacttt gaaattccaa cttctaatat tagaaggata 1620
atttgctcaa cctctggagg ttttccagag cctcacctct cctggttgga aaatggagaa 1680
gaattaaatg ccatcaacac aacagtttcc caagatcctg aaactgagct ctatgctgtt 1740
agcagcaaac tggatttcaa tatgacaacc aaccacagct tcatgtgtct catcaagtat 1800
ggacatttaa gagtgaatca gaccttcaac tggaatacaa ccaagcaaga gcattttcct 1860
gataactga 1869
<210> 18
<211> 638
<212> DNA
<213> Encephalomyocarditis virus
<400> 18
cgcccgcccc acgacccgca gcgcccgacc gaaaggagcg cacgacccca tcatccaatt 60
ccgccccccc cccctaacgt tactggccga agccgcttgg aataaggccg gtgtgcgttt 120
gtctatatgt tattttccac catattgccg tcttttggca atgtgagggc ccggaaacct 180
ggccctgtct tcttgacgag cattcctagg ggtctttccc ctctcgccaa aggaatgcaa 240
ggtctgttga atgtcgtgaa ggaagcagtt cctctggaag cttcttgaag acaaacaacg 300
tctgtagcga ccctttgcag gcagcggaac cccccacctg gcgacaggtg cctctgcggc 360
caaaagccac gtgtataaga tacacctgca aaggcggcac aaccccagtg ccacgttgtg 420
agttggatag ttgtggaaag agtcaaatgg ctctcctcaa gcgtattcaa caaggggctg 480
aaggatgccc agaaggtacc ccattgtatg ggatctgatc tggggcctcg gtgcacatgc 540
tttacatgtg tttagtcgag gttaaaaaac gtctaggccc cccgaaccac ggggacgtgg 600
ttttcctttg aaaaacacga tgataatatg gccacaac 638
<210> 19
<211> 3283
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 19
atgcagatcc cacaggcgcc ctggccagtc gtctgggcgg tgctacaact gggctggcgg 60
ccaggatggt tcttagactc cccagacagg ccctggaacc cccccacctt ctccccagcc 120
ctgctcgtgg tgaccgaagg ggacaacgcc accttcacct gcagcttctc caacacatcg 180
gagagcttcg tgctaaactg gtaccgcatg agccccagca accagacgga caagctggcc 240
gccttccccg aggaccgcag ccagcccggc caggactgcc gcttccgtgt cacacaactg 300
cccaacgggc gtgacttcca catgagcgtg gtcagggccc ggcgcaatga cagcggcacc 360
tacctctgtg gggccatctc cctggccccc aaggcgcaga tcaaagagag cctgcgggca 420
gagctcaggg tgacagagag aagggcagaa gtgcccacag cccaccccag cccctcaccc 480
aggccagccg gccagttcca agagcccaaa tcttgtgaca aaactcacac atgcccaccg 540
tgcccagcac ctgaactcct ggggggaccg tcagtcttcc tcttcccccc aaaacccaag 600
gacaccctca tgatctcccg gacccctgag gtcacatgcg tggtggtgga cgtgagccac 660
gaagaccctg aggtcaagtt caactggtac gtggacggcg tggaggtgca taatgccaag 720
acaaagccgc gggaggagca gtacaacagc acgtaccgtg tggtcagcgt cctcaccgtc 780
ctgcaccagg actggctgaa tggcaaggag tacaagtgca aggtctccaa caaagccctc 840
ccagccccca tcgagaaaac catctccaaa gccaaagggc agccccgaga accacaggtg 900
tacaccctgc ccccatcccg ggatgagctg accaagaacc aggtcagcct gacctgcctg 960
gtcaaaggct tctatcccag cgacatcgcc gtggagtggg agagcaatgg gcagccggag 1020
aacaactaca agaccacgcc tcccgtgctg gactccgacg gctccttctt cctctacagc 1080
aagctcaccg tggacaagag caggtggcag caggggaacg tcttctcatg ctccgtgatg 1140
catgaggctc tgcacaacca ctacacgcag aagagcctct ccctgtctcc gggtaaatga 1200
gaattccgcc cgccccacga cccgcagcgc ccgaccgaaa ggagcgcacg accccatcat 1260
ccaattccgc cccccccccc taacgttact ggccgaagcc gcttggaata aggccggtgt 1320
gcgtttgtct atatgttatt ttccaccata ttgccgtctt ttggcaatgt gagggcccgg 1380
aaacctggcc ctgtcttctt gacgagcatt cctaggggtc tttcccctct cgccaaagga 1440
atgcaaggtc tgttgaatgt cgtgaaggaa gcagttcctc tggaagcttc ttgaagacaa 1500
acaacgtctg tagcgaccct ttgcaggcag cggaaccccc cacctggcga caggtgcctc 1560
tgcggccaaa agccacgtgt ataagataca cctgcaaagg cggcacaacc ccagtgccac 1620
gttgtgagtt ggatagttgt ggaaagagtc aaatggctct cctcaagcgt attcaacaag 1680
gggctgaagg atgcccagaa ggtaccccat tgtatgggat ctgatctggg gcctcggtgc 1740
acatgcttta catgtgttta gtcgaggtta aaaaacgtct aggccccccg aaccacgggg 1800
acgtggtttt cctttgaaaa acacgatgat aatatggcca caactgcaga tcggatccat 1860
gggccacaca cggaggcagg gaacatcacc atccaagtgt ccatacctca atttctttca 1920
gctcttggtg ctggctggtc tttctcactt ctgttcaggt gttatccacg tgaccaagga 1980
agtgaaagaa gtggcaacgc tgtcctgtgg tcacaatgtt tctgttgaag agctggcaca 2040
aactcgcatc tactggcaaa aggagaagaa aatggtgctg actatgatgt ctggggacat 2100
gaatatatgg cccgagtaca agaaccggac catctttgat atcactaata acctctccat 2160
tgtgatcctg gctctgcgcc catctgacga gggcacatac gagtgtgttg ttctgaagta 2220
tgaaaaagac gctttcaagc gggaacacct ggctgaagtg acgttatcag tcaaagctga 2280
cttccctaca cctagtatat ctgactttga aattccaact tctaatatta gaaggataat 2340
ttgctcaacc tctggaggtt ttccagagcc tcacctctcc tggttggaaa atggagaaga 2400
attaaatgcc atcaacacaa cagtttccca agatcctgaa actgagctct atgctgttag 2460
cagcaaactg gatttcaata tgacaaccaa ccacagcttc atgtgtctca tcaagtatgg 2520
acatttaaga gtgaatcaga ccttcaactg gaatacaacc aagcaagagc attttcctga 2580
taacgagccc aaatcttgtg acaaaactca cacatgccca ccgtgcccag cacctgaact 2640
cctgggggga ccgtcagtct tcctcttccc cccaaaaccc aaggacaccc tcatgatctc 2700
ccggacccct gaggtcacat gcgtggtggt ggacgtgagc cacgaagacc ctgaggtcaa 2760
gttcaactgg tacgtggacg gcgtggaggt gcataatgcc aagacaaagc cgcgggagga 2820
gcagtacaac agcacgtacc gtgtggtcag cgtcctcacc gtcctgcacc aggactggct 2880
gaatggcaag gagtacaagt gcaaggtctc caacaaagcc ctcccagccc ccatcgagaa 2940
aaccatctcc aaagccaaag ggcagccccg agaaccacag gtgtacaccc tgcccccatc 3000
ccgggatgag ctgaccaaga accaggtcag cctgacctgc ctggtcaaag gcttctatcc 3060
cagcgacatc gccgtggagt gggagagcaa tgggcagccg gagaacaact acaagaccac 3120
gcctcccgtg ctggactccg acggctcctt cttcctctac agcaagctca ccgtggacaa 3180
gagcaggtgg cagcagggga acgtcttctc atgctccgtg atgcatgagg ctctgcacaa 3240
ccactacacg cagaagagcc tctccctgtc tccgggtaaa tga 3283

Claims (4)

1. An immunomodulatory composition for synergistically increasing the proportion of IFN- γ and/or TNF- α positive cells comprising soluble PD-1, soluble CD80 and soluble TGFBR3, or a nucleic acid molecule encoding said soluble PD-1, soluble CD80 and soluble TGFBR3, wherein:
(1) the soluble PD-1 consists of SEQ ID NO: 1. SEQ ID NO:3 and SEQ ID NO: 4;
(2) the soluble CD80 consists of SEQ ID NO: 2. SEQ ID NO:3 and SEQ ID NO: 4;
(3) the soluble TGFBR3 consists of SEQ ID NO: 5. SEQ ID NO:3 and SEQ ID NO:4, and (b) the amino acid sequence shown in the figure.
2. An immunomodulatory composition for synergistically increasing the proportion of IFN- γ and/or TNF- α positive cells comprising soluble PD-1, soluble CD80 and soluble TGFBR3 or nucleic acid molecules encoding said soluble PD-1, soluble CD80 and soluble TGFBR3 wherein said soluble PD-1 and CD80 molecules are a fusion protein consisting of the amino acid sequence of SEQ ID NO: 1. SEQ ID NO: 2. SEQ ID NO:3 and SEQ ID NO:4 and the soluble TGFBR3 consists of the amino acid sequence shown in SEQ ID NO: 5. SEQ ID NO:3 and SEQ ID NO:4, and (b) the amino acid sequence shown in the figure.
3. A vaccine composition comprising an immunomodulator composition according to any of claims 1 or 2.
4. Use of an agent for the preparation of an immunomodulating agent composition for synergistically increasing the proportion of IFN- γ and/or TNF- α positive cells, wherein said agent consists of the following (1) to (3):
(1) the amino acid sequence is SEQ ID NO: 1. SEQ ID NO:3 and SEQ ID NO:4, soluble PD-1;
(2) the amino acid is SEQ ID NO: 2. SEQ ID NO:3 and SEQ ID NO:4, soluble CD 80;
(3) the amino acid is SEQ ID NO: 5. SEQ ID NO:3 and SEQ ID NO:4 soluble TGFBR 3.
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Antitumor Activity of a Recombinant Soluble Betaglycan in Human Breast Cancer Xenograft;Abhik Bandyopadhyay等;《CANCER RESEARCH》;20020815;4690-4695 *
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