CN110895320B - Deformation-free single-shot planar echo imaging method and device based on deep learning - Google Patents

Deformation-free single-shot planar echo imaging method and device based on deep learning Download PDF

Info

Publication number
CN110895320B
CN110895320B CN201911053423.9A CN201911053423A CN110895320B CN 110895320 B CN110895320 B CN 110895320B CN 201911053423 A CN201911053423 A CN 201911053423A CN 110895320 B CN110895320 B CN 110895320B
Authority
CN
China
Prior art keywords
image
shot
related auxiliary
neural network
deformation
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CN201911053423.9A
Other languages
Chinese (zh)
Other versions
CN110895320A (en
Inventor
郭华
胡张选
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Tsinghua University
Original Assignee
Tsinghua University
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Tsinghua University filed Critical Tsinghua University
Priority to CN201911053423.9A priority Critical patent/CN110895320B/en
Priority to PCT/CN2019/119490 priority patent/WO2021082103A1/en
Publication of CN110895320A publication Critical patent/CN110895320A/en
Application granted granted Critical
Publication of CN110895320B publication Critical patent/CN110895320B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • GPHYSICS
    • G01MEASURING; TESTING
    • G01RMEASURING ELECTRIC VARIABLES; MEASURING MAGNETIC VARIABLES
    • G01R33/00Arrangements or instruments for measuring magnetic variables
    • G01R33/20Arrangements or instruments for measuring magnetic variables involving magnetic resonance
    • G01R33/44Arrangements or instruments for measuring magnetic variables involving magnetic resonance using nuclear magnetic resonance [NMR]
    • G01R33/48NMR imaging systems
    • G01R33/54Signal processing systems, e.g. using pulse sequences ; Generation or control of pulse sequences; Operator console
    • G01R33/56Image enhancement or correction, e.g. subtraction or averaging techniques, e.g. improvement of signal-to-noise ratio and resolution
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/05Detecting, measuring or recording for diagnosis by means of electric currents or magnetic fields; Measuring using microwaves or radio waves 
    • A61B5/055Detecting, measuring or recording for diagnosis by means of electric currents or magnetic fields; Measuring using microwaves or radio waves  involving electronic [EMR] or nuclear [NMR] magnetic resonance, e.g. magnetic resonance imaging

Landscapes

  • Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • General Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • High Energy & Nuclear Physics (AREA)
  • Radiology & Medical Imaging (AREA)
  • Surgery (AREA)
  • Biophysics (AREA)
  • Heart & Thoracic Surgery (AREA)
  • Medical Informatics (AREA)
  • Molecular Biology (AREA)
  • Pathology (AREA)
  • Animal Behavior & Ethology (AREA)
  • Biomedical Technology (AREA)
  • Public Health (AREA)
  • Veterinary Medicine (AREA)
  • Signal Processing (AREA)
  • Condensed Matter Physics & Semiconductors (AREA)
  • General Physics & Mathematics (AREA)
  • Magnetic Resonance Imaging Apparatus (AREA)

Abstract

The invention discloses a high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging method and device based on deep learning, wherein the method comprises the following steps: acquiring a first image and a related auxiliary image of a single-time excitation plane echo, and acquiring a second image which is acquired in a multi-time excitation mode and meets a preset condition; performing deep neural network training according to the first image, the related auxiliary image and the second image to obtain network weight parameters so as to generate a deep neural network; and receiving a third image and a related auxiliary image of the single-shot plane echo, and inputting the third image and the related auxiliary image into the deep neural network to generate an imaging result. The method can realize the acquisition of the high-resolution high-signal-to-noise-ratio deformation-free magnetic resonance image under the quick scanning of single excitation, and effectively solves the problems of serious signal-to-noise ratio, serious deformation artifact and low resolution in the existing single-excitation EPI technology and the problem of overlong acquisition time in the multiple-excitation technology.

Description

Deformation-free single-shot planar echo imaging method and device based on deep learning
Technical Field
The invention relates to the technical field of plane echo imaging, in particular to a high-resolution high-signal-to-noise-ratio deformation-free single-shot plane echo imaging method and device based on deep learning.
Background
The rapid acquisition characteristics of EPI (Echo Planar Imaging, Planar Echo acquisition technology) make it have Imaging speed fast, insensitive to motion and so on the advantage, have obtained extensive application in clinical, especially single arouse EPI, accomplish the acquisition of whole k space after once RF arouses, have very important value in the application that requires high to Imaging speed, for example diffusion Imaging, functional Imaging, perfusion Imaging, cardiac Imaging and real-time Imaging etc.. However, EPI acquisition also has its own deficiencies, and longer readout times can be introduced
Figure BDA0002255919270000011
Due to the blurring effect caused by attenuation, the lower bandwidth in the phase encoding direction can cause serious image deformation at the junction of different tissues with larger difference of magnetic medium rates, thereby influencing the observation of important tissue structures and the result of quantitative analysis.
The combination of single shot EPI with parallel acquisition techniques may reduce the length of the readout window and the effective Echo Spacing (ESP), reducing
Figure BDA0002255919270000012
Blurring effects and image distortion, but stillLimited by the acceleration factor while reducing the signal-to-noise ratio. MS-EPI (multiple shot EPI) techniques, such as iepi (interleaved EPI), rsEPI (read-out-segmented EPI), PROPELLER-EPI, etc. divide the entire k-space acquisition into several parts, which can reduce the above-mentioned problems while maintaining the signal-to-noise ratio, but still cannot completely eliminate EPI-specific deformation artifacts.
The Point Spread Function (PSF) -EPI collection of the PSF (Point spread function, Point spread function-based encoding) provides an effective mode for solving the problems, the obtained EPI is completely free from deformation and image blurring caused by T2 attenuation, and meanwhile, the collection acceleration of the tipped-CAIPI technology greatly improves the time efficiency of the PSF-EPI. Another type of deformation-free fast imaging method in magnetic resonance imaging includes Fast Spin Echo (FSE) and fast gradient echo (FFE), which acquire multiple spin echoes or gradient echo signals after one excitation, i.e., acquire multiple encoding positions by one excitation, thereby achieving the purpose of accelerating acquisition. However, the above mentioned deformation-free imaging techniques are all based on multiple excitation, which greatly prolongs the acquisition time, and is often difficult to apply in clinical acquisition with high time efficiency requirements, such as diffusion magnetic resonance imaging, functional magnetic resonance imaging, etc.
Disclosure of Invention
The present application is based on the recognition and discovery by the inventors of the following problems:
with the rise of big data analysis and the progress of large-scale computing power, deep learning has been greatly developed and plays a great role in various research fields. The same is true in the field of magnetic resonance imaging, which relates to various aspects of magnetic resonance imaging, including but not limited to image acquisition, reconstruction, recovery, quantitative analysis, high resolution reconstruction, and the like. The relevant study generates a 7T acquired image, for example from a magnetic resonance image acquired at a 3T magnetic field strength; a high resolution T1 weighted image is generated from a low resolution T1 weighted image, and so on. These studies provide new ideas for improving image quality (e.g., improving image resolution, signal-to-noise ratio, reducing image artifacts, etc.) without introducing other problems (e.g., acquisition time enhancement, signal-to-noise ratio reduction, etc.).
The present invention is directed to solving, at least to some extent, one of the technical problems in the related art.
Therefore, one objective of the present invention is to provide a single shot planar echo imaging method with high resolution, high signal-to-noise ratio and no deformation based on deep learning, which can achieve the purpose of obtaining a high-resolution, high-signal-to-noise ratio and no deformation magnetic resonance image under the fast scanning of single shot, and effectively solve the problems of serious signal-to-noise ratio, serious deformation artifact and low resolution existing in the existing single shot EPI technology and the problem of overlong acquisition time existing in the multiple shot technology.
Another objective of the present invention is to provide a single shot planar echo imaging device with high resolution, high signal-to-noise ratio and no deformation based on deep learning.
In order to achieve the above object, an embodiment of the present invention provides a high-resolution, high-signal-to-noise ratio and deformation-free single-shot planar echo imaging method based on deep learning, which includes the following steps: acquiring a first image and a related auxiliary image of a single-time excitation plane echo, and acquiring a second image which is acquired in a multi-time excitation mode and meets a preset condition; performing deep neural network training according to the first image, the related auxiliary image and the second image to obtain network weight parameters so as to generate a deep neural network; and receiving a third image and a related auxiliary image of the single-shot plane echo, and inputting the third image and the related auxiliary image into the deep neural network to generate an imaging result.
The high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging method based on the deep learning combines the deep learning with single-shot EPI acquisition in the single-phase coding direction, and uses a deformation-free EPI image acquired in a multi-shot mode as a standard to perform network learning, so that a high-resolution high-signal-to-noise-ratio deformation-free high-quality image can be acquired only by using the acquisition time of the single-shot EPI in the single-phase coding direction, and meanwhile, the quality of an output image is improved by combining with an auxiliary image strategy.
In addition, the high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging method based on the deep learning according to the above embodiment of the present invention may further have the following additional technical features:
further, in one embodiment of the present invention, the loss function used in the training process is as follows:
Figure BDA0002255919270000021
wherein u is an image predicted and generated by the network, and u is*For a high quality image to be actually acquired,
Figure BDA0002255919270000022
for SSIM loss, | u-u*|1Is a loss of the l1 norm,
Figure BDA0002255919270000023
in order to be a first-order gradient loss,
Figure BDA0002255919270000024
for second order gradient losses, GSSIMThe convolution kernel used to make the values of the various loss functions at the same scale comes from the calculation process of the SSIM index, w1,w2,w3The proportion of various loss functions in the composite loss function is taken as the proportion.
Further, in an embodiment of the invention, the associated auxiliary images are T2 weighted configurations, T2-FLAIR, T1 weighted configurations, etc., the first and third images are acquired with single shot EPI in a single phase encoding direction, and the first and third images are diffusion magnetic resonance images including images without diffusion encoding gradients and images with 6 different diffusion encoding gradient directions.
Further, in an embodiment of the present invention, the inputting the third image and the related auxiliary image into the deep neural network to generate an imaging result includes: block-inputting the third image of a single shot EPI and a corresponding auxiliary image; and combining the outputs into a complete image according to the blocks to obtain the imaging result.
In order to achieve the above object, another embodiment of the present invention provides a high-resolution high-snr single shot echo planar imaging device without distortion based on deep learning, including: the acquisition module is used for acquiring a first image and a related auxiliary image of a single-time excitation plane echo and acquiring a second image which is acquired in a multi-time excitation mode and meets a preset condition; the training module is used for carrying out deep neural network training according to the first image, the related auxiliary image and the second image to obtain network weight parameters so as to generate a deep neural network; and the imaging module is used for receiving a third image and a related auxiliary image of the single-shot plane echo, inputting the third image and the related auxiliary image into the deep neural network and generating an imaging result.
The high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging device based on the deep learning combines the deep learning with single-shot EPI acquisition in the single-phase coding direction, and performs network learning by using a deformation-free EPI image acquired in a multi-shot mode as a standard, so that a high-resolution high-signal-to-noise-ratio deformation-free high-quality image can be acquired only by using the acquisition time of the single-shot EPI in the single-phase coding direction, and meanwhile, the quality of an output image is improved by combining with an auxiliary image strategy.
In addition, the high-resolution high-signal-to-noise ratio deformation-free single-shot planar echo imaging device based on the deep learning according to the above embodiment of the present invention may further have the following additional technical features:
further, in one embodiment of the present invention, the loss function used in the training process is as follows:
Figure BDA0002255919270000031
wherein u is an image predicted and generated by the network, and u is*Is actually the height of the collectionThe quality of the image is such that,
Figure BDA0002255919270000032
for SSIM loss, | u-u*|1Is a loss of the l1 norm,
Figure BDA0002255919270000033
in order to be a first-order gradient loss,
Figure BDA0002255919270000034
for second order gradient losses, GSSIMThe convolution kernel used to make the values of the various loss functions at the same scale comes from the calculation process of the SSIM index, w1,w2,w3The proportion of various loss functions in the composite loss function is taken as the proportion.
Further, in an embodiment of the invention, the associated auxiliary images are T2 weighted configurations, T2-FLAIR, T1 weighted configurations, etc., the first and third images are acquired with single shot EPI in a single phase encoding direction, and the first and third images are diffusion magnetic resonance images including images without diffusion encoding gradients and images with 6 different diffusion encoding gradient directions.
Further, in an embodiment of the present invention, the imaging module is further configured to block the third image of the single shot EPI and the corresponding auxiliary image, and combine the outputs into a complete image by block to obtain the imaging result.
Additional aspects and advantages of the invention will be set forth in part in the description which follows and, in part, will be obvious from the description, or may be learned by practice of the invention.
Drawings
The foregoing and/or additional aspects and advantages of the present invention will become apparent and readily appreciated from the following description of the embodiments, taken in conjunction with the accompanying drawings of which:
FIG. 1 is a flowchart of a high resolution high SNR deformation-free single shot echo planar imaging method based on deep learning according to an embodiment of the present invention;
FIG. 2 is a flowchart of a method for high resolution, high signal-to-noise ratio, deformation-free single shot echo planar imaging based on deep learning according to an embodiment of the present invention;
FIG. 3 is a schematic diagram of a deep neural network according to an embodiment of the present invention;
fig. 4 is a schematic structural diagram of a high-resolution high-snr deformation-free single-shot planar echo imaging device based on deep learning according to an embodiment of the present invention.
Detailed Description
Reference will now be made in detail to embodiments of the present invention, examples of which are illustrated in the accompanying drawings, wherein like or similar reference numerals refer to the same or similar elements or elements having the same or similar function throughout. The embodiments described below with reference to the drawings are illustrative and intended to be illustrative of the invention and are not to be construed as limiting the invention.
The method and the device for high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging based on deep learning according to the embodiment of the invention are described below with reference to the accompanying drawings.
FIG. 1 is a flowchart of a method for high resolution, high signal-to-noise ratio, deformation-free single shot planar echo imaging based on deep learning according to an embodiment of the present invention.
As shown in FIG. 1, the high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging method based on the deep learning comprises the following steps:
in step S101, a first image and a related auxiliary image of a single shot echo planar are acquired, and a second image that satisfies a preset condition and is acquired by a multi-shot mode is acquired.
It can be understood that the embodiment of the present invention acquires an image of a single shot EPI and a related auxiliary image, and acquires a high resolution high signal-to-noise ratio deformation-free image in a multi-shot mode. The first image is an image of single-shot EPI, and the second image meeting the preset condition is a high-resolution high-signal-to-noise-ratio deformation-free image.
Further, in an embodiment of the present invention, the associated auxiliary images are T2 weighted structure, T2-FLAIR, T1 weighted structure, etc., the first image and the third image are acquired by single shot EPI in a single phase encoding direction, and the first image and the third image are diffusion magnetic resonance images, which include images without diffusion encoding gradients and images with 6 different diffusion encoding gradient directions.
Specifically, the single-shot EPI image used in the embodiment of the present invention is diffusion magnetic resonance imaging, and includes an image without a diffusion encoding gradient (b0) and an image with 6 different diffusion encoding gradient directions (b1), and the output is a high-resolution high-snr (signal to noise ratio) deformation-free image acquired by using the same diffusion encoding strategy and using a multi-shot mode (acquired by using a PSF-EPI mode in the embodiment of the present invention). Meanwhile, in a conventional scan, images with various contrasts, such as T2 weighted structure images and the like, are generally scanned besides diffusion magnetic resonance images, and in order to fully utilize the data, the embodiment of the present invention proposes a strategy of using auxiliary images, that is, the input of the deep neural network includes not only single-shot EPI images but also acquired auxiliary images, such as T2 weighted structure images, T2-FLAIR, T1 weighted structure images and the like (as shown in fig. 2), to form a composite multi-channel image. By using the strategy, the learning effect of the neural network can be greatly improved, and the quality of an output image is improved.
In step S102, a deep neural network training is performed according to the first image, the related auxiliary image, and the second image to obtain a network weight parameter, so as to generate a deep neural network.
It is understood that the training phase: and carrying out deep neural network training by using the image acquired by single-excitation EPI, the related auxiliary image and the high-resolution high-signal-to-noise-ratio deformation-free image acquired by a multi-excitation mode to obtain network weight parameters.
Specifically, as shown in fig. 3, the deep neural network structure used in the embodiment of the present invention includes 8 channels (b0, 6 b1 and auxiliary T2 weighted structural images for single shot EPI acquisition) in the input image, and 7 channels (b0, 6 b1 for PSF-EPI acquisition). The network uses a commonly used U-net structure, where scaling of features is achieved by convolutional layers with step size and deconvolution layers. Each convolutional layer contains a BN layer (Batch Normalization) and an active layer (ReLU).
In the training process, the image is subjected to block training along the phase encoding direction, the input matrix size is 217 × 32 × 8, the output matrix size is 224 × 32 × 8, and the convolution kernel size and the convolution kernel number of each layer are not listed in detail here. The loss function used during training is as follows:
Figure BDA0002255919270000051
wherein u is an image predicted and generated by the network, and u is*For a high quality image to be actually acquired,
Figure BDA0002255919270000052
for the loss of SSIM (structural similarity index), | u-u*|1Is a loss of norm at l1 (mean absolute error, MAE),
Figure BDA0002255919270000053
for first order gradient loss,
Figure BDA0002255919270000054
for second order gradient losses, GSSIMThe convolution kernel used to make the values of the various loss functions at the same scale comes from the calculation process of the SSIM index, w1,w2,w3The proportion of various loss functions in the composite loss function is taken as the proportion.
The embodiment of the invention does not limit the imaging contrast, and besides the embodiment of the invention is applied to diffusion magnetic resonance imaging acquired by single-shot EPI, the embodiment of the invention can also be applied to T1 weighting, T2 weighting, T2 × weighting, Proton Density (PD) weighting and the like acquired by using the method; in the embodiment of the invention, the EPI image in the single-phase encoding direction is used, and the EPI image in the two-direction phase encoding direction can also be input at the same time, which is not limited by the invention; the acquisition mode of the high-resolution high-signal-to-noise-ratio deformation-free image is not limited to point spread function encoded EPI (PSF-EPI), and a high-resolution deformation-free image can be obtained by using multi-shot spin echo acquisition (FSE), gradient echo acquisition (FFE) and the like, or using an image deformation correction algorithm (such as fieldmap correction, topup, or a combination of the two); the diffusion preparation sequence for diffusion imaging used in the embodiment of the present invention is PGSE (pulsed gradient spin echo), and an STE (stimulated echo) diffusion preparation sequence, an Oscillating Gradient Spin Echo (OGSE) diffusion preparation sequence, a Double Diffusion Encoding (DDE) diffusion preparation sequence, a Convex Optimized Diffusion Encoding (CODE) diffusion preparation sequence, and the like may also be used; the embodiment of the invention does not limit the number of network layers, the number of convolution kernels, the size of the convolution kernels, the activation mode, the regularization mode, the activation mode, the loss function and the like used by the U-net; the invention does not limit the optimizers (such as Adam, SGD and the like) used in the training process, various parameters (such as learning rate, batch-size and the like) and the like; the network structure used in the present invention is not limited to U-net, and ResNet (reactive networks), GAN (generic adaptive networks), and the like and their variants can be used; the invention does not limit the matrix size of the input image and the output image, and depends on the resolution of the collected image, the image mode, the size of the blocks and the like; the selected auxiliary image is not limited by the embodiment of the invention, and a T2 weighted structure, a T1 weighted structure, a T2-FLAIR and the like or a combination thereof can be used.
In step S103, the third image and the related auxiliary image of the single shot echo planar are received, and the third image and the related auxiliary image are input to the deep neural network, so as to generate an imaging result.
It will be appreciated that, during the testing (application) phase: and inputting the image acquired by single-shot excitation of the EPI and the related auxiliary image to a deep neural network obtained in a training stage to generate a corresponding high-resolution high-signal-to-noise-ratio deformation-free high-quality image.
Further, in an embodiment of the present invention, the third image and the related auxiliary image are input to a deep neural network, and the imaging result is generated, including: inputting a third image of the single shot EPI and a corresponding auxiliary image in a blocking mode; and combining the outputs into a complete image according to the blocks to obtain an imaging result.
It will be appreciated that after the network weight parameters are obtained through the training phase, similar to the training process (as shown in fig. 2), the single shot EPI images and the corresponding auxiliary images are input in blocks, and then the outputs are combined into a complete image in blocks, i.e., a corresponding high resolution high signal-to-noise ratio deformation-free image can be obtained.
In summary, the embodiment of the present invention combines the deep learning with the single-shot EPI acquisition technique, and learns the image acquired by the single-shot EPI acquisition to generate the high-resolution, high-snr, and deformation-free image acquired by the multi-shot EPI acquisition technique, thereby achieving the purpose of rapidly acquiring the high-quality magnetic resonance image by using only the time required for the single-shot EPI acquisition.
According to the high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging method based on the deep learning, the deep learning is combined with the single-shot EPI acquisition in the single-phase coding direction, the deformation-free EPI image acquired in a multi-shot mode is used as a standard for network learning, so that the high-resolution high-signal-to-noise-ratio deformation-free high-quality image can be acquired only by using the acquisition time of the single-shot EPI in the single-phase coding direction, and meanwhile, the quality of an output image is improved by combining with an auxiliary image strategy.
The invention further provides a high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging device based on deep learning, which is provided by the embodiment of the invention and is described with reference to the accompanying drawings.
Fig. 4 is a schematic structural diagram of a high-resolution high-snr deformation-free single-shot planar echo imaging device based on deep learning according to an embodiment of the present invention.
As shown in fig. 4, the depth learning-based high-resolution high-snr deformation-free single-shot planar echo imaging device 10 includes: an acquisition module 100, a training module 200, and an imaging module 300.
The acquiring module 100 is configured to acquire a first image and a related auxiliary image of a single excitation plane echo, and acquire a second image that satisfies a preset condition and is acquired in a multi-excitation manner; the training module 200 is configured to perform deep neural network training according to the first image, the related auxiliary image, and the second image to obtain a network weight parameter, so as to generate a deep neural network; the imaging module 300 is configured to receive a third image and a related auxiliary image of the single-shot plane echo, and input the third image and the related auxiliary image to the deep neural network to generate an imaging result. The device 10 of the embodiment of the invention can realize the acquisition of a high-resolution and high-signal-to-noise-ratio deformation-free magnetic resonance image under the quick scanning of single excitation, and effectively solves the problems of serious signal-to-noise ratio, serious deformation artifact and low resolution in the existing single-excitation EPI technology and the problem of overlong acquisition time in the multiple-excitation technology.
Further, in one embodiment of the present invention, the loss function used in the training process is as follows:
Figure BDA0002255919270000071
wherein u is an image predicted and generated by the network, and u is*For a high quality image to be actually acquired,
Figure BDA0002255919270000072
for SSIM loss, | u-u*|1Is a loss of the l1 norm,
Figure BDA0002255919270000073
in order to be a first-order gradient loss,
Figure BDA0002255919270000074
for second order gradient losses, GSSIMA convolution kernel used to make multiple loss function values in the same scaleFrom the calculation of the SSIM index, w1,w2,w3The proportion of various loss functions in the composite loss function is taken as the proportion.
Further, in an embodiment of the present invention, the related auxiliary images are T2 weighted structure, T2-FLAIR, T1 weighted structure, etc., the first image and the third image are acquired by single shot EPI in a single phase encoding direction, and the first image and the third image are diffusion magnetic resonance images, which include images without diffusion encoding gradients and images with 6 different diffusion encoding gradient directions.
Further, in an embodiment of the present invention, the imaging module 300 is further configured to block the input third image of the single shot EPI and the corresponding auxiliary image, and combine the outputs into a complete image by block to obtain the imaging result.
It should be noted that the foregoing explanation of the embodiment of the high-resolution high-snr non-deformation single-shot planar echo imaging method based on deep learning is also applicable to the high-resolution high-snr non-deformation single-shot planar echo imaging device based on deep learning of this embodiment, and details are not repeated here.
According to the depth learning-based high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging device provided by the embodiment of the invention, the depth learning is combined with the single-shot EPI acquisition in the single-phase coding direction, and the deformation-free EPI image acquired by a multi-shot mode is used as a standard for network learning, so that the high-resolution high-signal-to-noise-ratio deformation-free high-quality image can be acquired only by using the acquisition time of the single-shot EPI in the single-phase coding direction, and meanwhile, the quality of the output image is improved by combining with the strategy of an auxiliary image.
Furthermore, the terms "first", "second" and "first" are used for descriptive purposes only and are not to be construed as indicating or implying relative importance or implicitly indicating the number of technical features indicated. Thus, a feature defined as "first" or "second" may explicitly or implicitly include at least one such feature. In the description of the present invention, "a plurality" means at least two, e.g., two, three, etc., unless specifically limited otherwise.
In the description herein, references to the description of the term "one embodiment," "some embodiments," "an example," "a specific example," or "some examples," etc., mean that a particular feature, structure, material, or characteristic described in connection with the embodiment or example is included in at least one embodiment or example of the invention. In this specification, the schematic representations of the terms used above are not necessarily intended to refer to the same embodiment or example. Furthermore, the particular features, structures, materials, or characteristics described may be combined in any suitable manner in any one or more embodiments or examples. Furthermore, various embodiments or examples and features of different embodiments or examples described in this specification can be combined and combined by one skilled in the art without contradiction.
Although embodiments of the present invention have been shown and described above, it is understood that the above embodiments are exemplary and should not be construed as limiting the present invention, and that variations, modifications, substitutions and alterations can be made to the above embodiments by those of ordinary skill in the art within the scope of the present invention.

Claims (2)

1. A high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging method based on deep learning is characterized by comprising the following steps of:
acquiring a first image and a related auxiliary image of a single-shot plane echo, and acquiring a second image which is acquired in a multi-shot mode and meets a preset condition, wherein the first image is an image of a single-shot EPI, and the second image which meets the preset condition is a high-resolution high-signal-to-noise ratio deformation-free image;
performing deep neural network training according to the first image, the related auxiliary image and the second image to obtain network weight parameters so as to generate a deep neural network, wherein a loss function used in the training process is as follows:
Figure FDA0002987039030000011
wherein u is an image predicted and generated by the network, and u is*For a high quality image to be actually acquired,
Figure FDA0002987039030000012
for SSIM loss, | u-u*|1Is a loss of the l1 norm,
Figure FDA0002987039030000013
in order to be a first-order gradient loss,
Figure FDA0002987039030000014
for second order gradient losses, GSSIMThe convolution kernel used to make the values of the various loss functions at the same scale comes from the calculation process of the SSIM index, w1,w2,w3The proportion of various loss functions in the composite loss function is taken as the proportion; and
receiving a third image and a related auxiliary image of a single-shot plane echo, and inputting the third image and the related auxiliary image into the deep neural network to generate an imaging result; the related auxiliary images are T2 weighted structure images, T2-FLAIR and T1 weighted structure images, the first image and the third image are acquired by single-shot EPI in a single-phase encoding direction, the first image and the third image are diffusion magnetic resonance images, and the diffusion magnetic resonance imaging comprises images without diffusion encoding gradients and images with 6 different diffusion encoding gradient directions; the inputting the third image and the related auxiliary image into the deep neural network to generate an imaging result, including: block-inputting the third image of a single shot EPI and a corresponding auxiliary image; and combining the outputs into a complete image according to the blocks to obtain the imaging result.
2. A high-resolution high-signal-to-noise-ratio deformation-free single-shot planar echo imaging device based on deep learning is characterized by comprising the following components:
the acquisition module is used for acquiring a first image and a related auxiliary image of a single-time excitation plane echo and acquiring a second image which is acquired in a multi-time excitation mode and meets a preset condition;
a training module, configured to perform deep neural network training according to the first image, the related auxiliary image, and the second image to obtain a network weight parameter, so as to generate a deep neural network, where a loss function used in a training process is as follows:
Figure FDA0002987039030000021
wherein u is an image predicted and generated by the network, and u is*For a high quality image to be actually acquired,
Figure FDA0002987039030000022
for SSIM loss, | u-u*|1Is a loss of the l1 norm,
Figure FDA0002987039030000023
in order to be a first-order gradient loss,
Figure FDA0002987039030000024
for second order gradient losses, GSSIMThe convolution kernel used to make the values of the various loss functions at the same scale comes from the calculation process of the SSIM index, w1,w2,w3The proportion of various loss functions in the composite loss function is taken as the proportion; and
the imaging module is used for receiving a third image of a single-shot plane echo and a related auxiliary image, inputting the third image and the related auxiliary image into the deep neural network, and generating an imaging result, wherein the related auxiliary image is a T2 weighted structure image, a T2-FLAIR and a T1 weighted structure image, the first image and the third image are acquired by single-shot EPI in a single-phase encoding direction, the first image and the third image are diffusion magnetic resonance images, and the diffusion magnetic resonance imaging comprises an image without diffusion encoding gradients and images with 6 different diffusion encoding gradient directions; the inputting the third image and the related auxiliary image into the deep neural network to generate an imaging result, including: block-inputting the third image of a single shot EPI and a corresponding auxiliary image; and combining the outputs into a complete image according to the blocks to obtain the imaging result.
CN201911053423.9A 2019-10-31 2019-10-31 Deformation-free single-shot planar echo imaging method and device based on deep learning Active CN110895320B (en)

Priority Applications (2)

Application Number Priority Date Filing Date Title
CN201911053423.9A CN110895320B (en) 2019-10-31 2019-10-31 Deformation-free single-shot planar echo imaging method and device based on deep learning
PCT/CN2019/119490 WO2021082103A1 (en) 2019-10-31 2019-11-19 Distortionless single-shot echo planar imaging method and apparatus employing deep learning

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN201911053423.9A CN110895320B (en) 2019-10-31 2019-10-31 Deformation-free single-shot planar echo imaging method and device based on deep learning

Publications (2)

Publication Number Publication Date
CN110895320A CN110895320A (en) 2020-03-20
CN110895320B true CN110895320B (en) 2021-12-24

Family

ID=69787439

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201911053423.9A Active CN110895320B (en) 2019-10-31 2019-10-31 Deformation-free single-shot planar echo imaging method and device based on deep learning

Country Status (2)

Country Link
CN (1) CN110895320B (en)
WO (1) WO2021082103A1 (en)

Families Citing this family (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN112763958B (en) * 2020-12-10 2022-06-21 复旦大学 Multi-excitation plane echo magnetic resonance imaging method based on neural network
CN115469254A (en) * 2021-05-18 2022-12-13 上海联影医疗科技股份有限公司 Magnetic resonance quantitative imaging method
CN113855235A (en) * 2021-08-02 2021-12-31 应葵 Magnetic resonance navigation method and device for microwave thermal ablation operation of liver part
CN115494439B (en) * 2022-11-08 2023-04-07 中遥天地(北京)信息技术有限公司 Space-time coding image correction method based on deep learning
CN117011409B (en) * 2023-08-10 2024-05-10 厦门大学 Multi-position physical intelligent high-definition diffusion magnetic resonance data generation method

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109544652A (en) * 2018-10-18 2019-03-29 江苏大学 Add to weigh imaging method based on the nuclear magnetic resonance that depth generates confrontation neural network
WO2019113428A1 (en) * 2017-12-08 2019-06-13 Rensselaer Polytechnic Institute A synergized pulsing-imaging network (spin)
CN110095742A (en) * 2019-05-13 2019-08-06 上海东软医疗科技有限公司 A kind of echo planar imaging neural network based and device
CN110234400A (en) * 2016-09-06 2019-09-13 医科达有限公司 For generating the neural network of synthesis medical image
CN110346743A (en) * 2019-07-22 2019-10-18 上海东软医疗科技有限公司 A kind of Diffusion-weighted imaging method and apparatus

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7375519B2 (en) * 2006-04-20 2008-05-20 General Electric Company Method and apparatus of MR imaging with two dimensional phase and magnitude correction
CN109597012B (en) * 2018-12-24 2020-08-04 厦门大学 Single-scanning space-time coding imaging reconstruction method based on residual error network
CN109696647B (en) * 2019-02-21 2021-05-28 奥泰医疗系统有限责任公司 K space acquisition method and reconstruction method for three-dimensional multi-excitation diffusion weighted imaging
CN110244246B (en) * 2019-07-03 2021-07-16 上海联影医疗科技股份有限公司 Magnetic resonance imaging method, magnetic resonance imaging apparatus, computer device, and storage medium

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN110234400A (en) * 2016-09-06 2019-09-13 医科达有限公司 For generating the neural network of synthesis medical image
WO2019113428A1 (en) * 2017-12-08 2019-06-13 Rensselaer Polytechnic Institute A synergized pulsing-imaging network (spin)
CN109544652A (en) * 2018-10-18 2019-03-29 江苏大学 Add to weigh imaging method based on the nuclear magnetic resonance that depth generates confrontation neural network
CN110095742A (en) * 2019-05-13 2019-08-06 上海东软医疗科技有限公司 A kind of echo planar imaging neural network based and device
CN110346743A (en) * 2019-07-22 2019-10-18 上海东软医疗科技有限公司 A kind of Diffusion-weighted imaging method and apparatus

Also Published As

Publication number Publication date
WO2021082103A1 (en) 2021-05-06
CN110895320A (en) 2020-03-20

Similar Documents

Publication Publication Date Title
CN110895320B (en) Deformation-free single-shot planar echo imaging method and device based on deep learning
Lyu et al. Cine cardiac MRI motion artifact reduction using a recurrent neural network
CN113077527B (en) Rapid magnetic resonance image reconstruction method based on undersampling
US7202663B2 (en) Method for generating fast magnetic resonance images
Lv et al. Transfer learning enhanced generative adversarial networks for multi-channel MRI reconstruction
CN106997034B (en) Based on the magnetic resonance diffusion imaging method rebuild using Gauss model as example integration
CN108335339A (en) A kind of magnetic resonance reconstruction method based on deep learning and convex set projection
US11681001B2 (en) Deep learning method for nonstationary image artifact correction
CN110133556B (en) Magnetic resonance image processing method, device, equipment and storage medium
CN105232045A (en) Single-scanning quantitative magnetic resonance diffusion imaging method based on dual echoes
CN108596994A (en) A kind of Diffusion-weighted imaging method being in harmony certainly based on deep learning and data
US7495440B2 (en) Q-space sampling method and diffusion spectrum imaging method employing the same
CN114998458A (en) Undersampled magnetic resonance image reconstruction method based on reference image and data correction
CN116230239A (en) Method for constructing multiparameter post-processing model for magnetic resonance diffusion weighted imaging
CN108460723A (en) Bilateral full variation image super-resolution rebuilding method based on neighborhood similarity
US9880247B2 (en) System and method for magnetic resonance imaging using highly accelerated projection imaging
CN106841273A (en) A kind of reconstructing water fat separated method based on single sweep space-time code magnetic resonance imaging
CN110109036B (en) Two-dimensional space-time coding multi-scan magnetic resonance imaging non-Cartesian sampling and reconstruction method
CN108514415A (en) A kind of quick magnetic susceptibility-weighted imaging scanning sequence and method
Dar et al. Learning deep mri reconstruction models from scratch in low-data regimes
CN116758120A (en) 3T MRA-7T MRA prediction method based on deep learning
US11467240B2 (en) Methods, systems, and computer readable media for accelerating diffusion magnetic resonance imaging (MRI) acquisition via slice-interleaved diffusion encoding
US11119173B2 (en) Dynamic imaging based on echo planar imaging sequence
EP1176555A2 (en) Image processing method and apparatus, recording medium, and imaging apparatus
CN113920211A (en) Rapid magnetic sensitivity weighted imaging method based on deep learning

Legal Events

Date Code Title Description
PB01 Publication
PB01 Publication
SE01 Entry into force of request for substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant