CN110387434A - For detecting the primer sets and kit of herpes-like virus EBV - Google Patents

For detecting the primer sets and kit of herpes-like virus EBV Download PDF

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Publication number
CN110387434A
CN110387434A CN201810336564.0A CN201810336564A CN110387434A CN 110387434 A CN110387434 A CN 110387434A CN 201810336564 A CN201810336564 A CN 201810336564A CN 110387434 A CN110387434 A CN 110387434A
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China
Prior art keywords
ebv
kit
herpes
detecting
primer
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Chinese (zh)
Inventor
马东礼
刘孝荣
姜含芳
邢志浩
朱纯青
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/6851Quantitative amplification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701Specific hybridization probes
    • C12Q1/705Specific hybridization probes for herpetoviridae, e.g. herpes simplex, varicella zoster
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/166Oligonucleotides used as internal standards, controls or normalisation probes

Abstract

The present invention relates to a kind of for detecting the primer sets of herpes-like virus EBV.The primer sets include respectively for EBV gene and interior target specific primer and probe.The invention further relates to a kind of for detecting the kit of herpes-like virus EBV.The kit includes PCR reaction solution, enzymatic mixture, negative controls, positive reference substance and standard items, and the PCR reaction solution includes detection EBV gene and interior target specific primer and probe.Kit provided by the invention and its detection method have many advantages, such as that easy to operate, detection time is short, detection sensitivity is high and specific good, are particularly suitable for the popularization and application in clinical examination work.

Description

For detecting the primer sets and kit of herpes-like virus EBV
Technical field
The present invention relates to vitro diagnostic techniques fields more particularly to a kind of for detecting the primer sets of herpes-like virus EBV And kit.
Background technique
Epstein-Barr virus (Epstein-Barr virus, EBV) was found in 1964, with the name of the finder of the virus Epstein and Barr name.It belongs to herpesviral γ subfamily, also referred to as 4 type herpesvirals.EBV genome is double-strand DNA, complete sequence length are about 172kb.
EBV is mainly invaded by modes such as saliva, droplets, enters blood circulation after breeding in nasopharyngeal epithelial cell, After invading the blood cells such as bone-marrow-derived lymphocyte, viral genome is more stable cyclic structure by linear transformation, and fractionated viral may be used also It is integrated into human gene group DNA.EBV infects extensively in crowd, and 90% the above are latent infections.
Disease is related to EBV infection there are many having been demonstrated that, wherein it is thin to common are infectiousness monokaryon for disease in the blood system Born of the same parents' increase disease, EBV correlation Hemophagocytic syndrome.There are about 50% after the normal people's primary infection EBV of immune function to show as allusion quotation The infectious mononucleosis of type.And the poor prognosis of Hemophagocytic syndrome, more than 50% death.Immune deficiency person Lymphoproliferative disease's even malignant lymphoma easily occurs after infection EBV.EBV infection is also drenched with kinds of tumors such as Hugh Burkitt Bar tumor, the development of nasopharyngeal carcinoma etc. are related.
Its symptoms of varying severity when due to EBV infection, can be involved the multiple systems of whole body, and clinical manifestation is also in diversity, is held It easily causes and fails to pinpoint a disease in diagnosis and mistaken diagnosis.So the diagnosis of EBV needs the auxiliary of laboratory testing method.Serologic detection and EBV nucleic acid It is detected as the routine inspection method of EBV infection.In Serologic detection, it is now recognized that the anti-EB-VCA-IgM positive is acute infection Reliable markers, and mistaken diagnosis and rate of missed diagnosis can be substantially reduced in conjunction with EBV-EA-IgG antibody determination.And in blood plasma and throat swab Middle detection EBV-DNA can effectively assist the clinical diagnosis of early stage.
Real-Time Fluorescent Quantitative PCR Technique is a kind of nucleic acid detection technique quickly grown in recent years, using one kind with glimmering The amplification instrument of optical detection device, fluorescence detection device can issue the excitation of specific wavelength according to certain routines periodically Light collects detection fluorescence signal, the level of amplification for each circulation that the dynamic change by detecting fluorescence signal reflects in real time, examination Acquisition amplification curve can be automatically analyzed after testing by software, according to intersection point, that is, critical value of amplification curve and fluorescence threshold line And the shape of amplification curve, it can be determined that yin and yang attribute is as a result, and learn the definite value result of concentration of specimens.Real-time fluorescence PCR method Because of high sensitivity and high specificity, short time consumption is short and in wide clinical application.
Summary of the invention
The object of the present invention is to provide a kind of for detecting the primer sets and kit of herpes-like virus EBV, has operation Quickly, the advantage that method is simple, detection sensitivity is high, specificity is strong and accuracy is good.
The present invention provides a kind of for detecting the primer sets of herpes-like virus EBV, and the primer sets include such as following nucleosides Primer and probe shown in acid sequence:
EBV upstream primer:
5’-GCAGCTATTTCTGGTCGCAT-3’
EBV downstream primer:
5’-GAGGGCTAGGGAGAGGTAGA-3’
EBV probe:
5’-FAM-AGAGCGCCAGGAGTCCACACA-TAMRA-3’
Internal standard upstream primer:
5’-GGCATGTGGAGGAAGGTGGT-3’
Internal standard downstream primer:
5’-CCATGGACTGGCTCTCCGTT-3’
Internal standard probe:
5’-HEX-ACGCAGCCCTGCTTCGTTCGCCG-TAMRA-3’。
The present invention also provides a kind of for detecting the kit of herpes-like virus EBV, and the kit includes PCR reaction Liquid, the PCR reaction solution include the primer as shown in following nucleotide sequence and probe:
EBV upstream primer:
5’-GCAGCTATTTCTGGTCGCAT-3’
EBV downstream primer:
5’-GAGGGCTAGGGAGAGGTAGA-3’
EBV probe:
5’-FAM-AGAGCGCCAGGAGTCCACACA-TAMRA-3’
Internal standard upstream primer:
5’-GGCATGTGGAGGAAGGTGGT-3’
Internal standard downstream primer:
5’-CCATGGACTGGCTCTCCGTT-3’
Internal standard probe:
5’-HEX-ACGCAGCCCTGCTTCGTTCGCCG-TAMRA-3’。
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the PCR reaction Final concentration of 0.4 μm of ol/L of each primer in liquid, final concentration of 0.125 μm of ol/L of each probe.
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the kit It further include enzymatic mixture, the enzymatic mixture is the mixed liquor of thermal starting enzyme and UNG enzyme.
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the kit It further include positive reference substance and negative controls.
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the positive is right It is using pUC57 as the target fragment recombinant plasmid of carrier according to product, the nucleotide sequence of the purpose segment is as follows:
ACAGCTGTCCAGCAAGAAGAGGAGGTGGTAAGCGGTTCACCTTCAGGGGTAAGTAACCTGACCTCTCCAGGGCTCAC ATAAAGGGAGGCTTAGTATACATGCTTCTTGCTTTTCACAGGAACCTGGGGGCTAGTCTGGGTGGGTTTAGGCCCTC TTGGCCACGCAGCAGCTATTTCTGGTCGCATCAGAGCGCCAGGAGTCCACACAAATGTAAGAGGGGGTCTTCTACCT CTCCCTAGCCCTCATGGCC。
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the feminine gender is right It is physiological saline according to product.
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the kit It further include containing using pUC57 as the standard items of the genetic fragment recombinant plasmid of the EBV of carrier, the concentration gradient of the standard items is divided It Wei 1 × 104Copy/ml, 1 × 105Copy/ml, 1 × 106Copy/ml, 1 × 107Copy/ml.
In one preferred embodiment of kit provided by the present invention for detecting herpes-like virus EBV, the kit Further include internal standard, the interior target nucleotide sequence is as follows:
TCACAAGCAGGAGTGTGCCAGGAGAAGGCCAAACCATCCAGTGCCGGTGGTTTGACCACGAGGAGTGCATCCTGCAC GGAGTCACTGAGCTCGTGACCTCCACGCTGCTCGTCCCCTGCGCTATCGAGAGGGCACTCTCTGTGTCTCAG CTGGTGCCGCTGGCGCAGAGTGTTTTGGGCCCCTTAAAGCTCAGCATGGCTGGTTCTGGAGAGATGGAAAAGAGAAA GGATTTCCCCCATTTGGGTGCCTCGGGCATGTGGAGGAAGGTGGTCCGGCGAACGAAGCAGGGCTGCGTGAAGGGGA TCTGATAACCCACGTCAACGGAGAGCCAGTCCATGG。
The present invention also provides a kind of primer sets described above in the kit that preparation detects detection herpes-like virus EBV Purposes.
Compared to the prior art, beneficial provided by the present invention for the primer sets and kit that detect herpes-like virus EBV Effect is:
One, kit provided by the invention operation is quickly, method is simple, detection sensitivity is up to 99.2%, specificity 100%, the EBV-DNA in unknown sample can fast and accurately be detected using the kit, be provided for diagnosis EBV infection Reliable experimental basis is particularly suitable for the popularization and application in clinical examination work.
Two, in PCR reaction solution include the specific primer for herpes-like virus EBV design, probe and for interior target Specific primer and probe have the advantages that expression is stable based on internal standard, it is possible to prevente effectively from the generation of false negative, and can also be compared with Destination gene expression amount is corrected well, so that the sensitivity and repeatability of the method for the present invention are improved, so that testing result It is more accurate and reliable.
Detailed description of the invention
Fig. 1 is the PCR amplification curve provided by the present invention for negative controls in detection herpes-like virus EBV kit Figure;
Fig. 2 is the PCR amplification curve provided by the present invention for positive reference substance in detection herpes-like virus EBV kit Figure;
Fig. 3 is the PCR amplification curve graph of clinical sample 1;
Fig. 4 is the PCR amplification curve graph of clinical sample 2;
Amplification curve diagram of the Fig. 5 provided by the present invention for detection herpes-like virus EBV kit Plays product, wherein 1.~concentration 4. is respectively 1 × 107Copy/ml, 1 × 106Copy/ml, 1 × 105Copy/ml and 1 × 104Copy/ml;
Fig. 6 is the canonical plotting for expanding standard items and establishing.
Specific embodiment
In order to make the objectives, technical solutions, and advantages of the present invention clearer, with reference to the accompanying drawings and embodiments, right The present invention is described in further detail.It should be appreciated that described herein, specific examples are only used to explain the present invention, and It is not used in the restriction present invention.
Embodiment 1: the design and synthesis of primer and probe
Bordetella is downloaded in internal authority database GenBank nucleic acid database (Nucleotide) The canonical sequence (GenBank:NC_018828.1, sequence 4887379bp) of parapertussis, and use free open source Kers tool Jellyfish (https: //github.com/gmarcais/Jellyfish) to whole genome sequence carry out Continuous cutting, the nucleotide sequence library that the sequence length that base stroke obtains in turn is 250 therefrom preferably repeat more (>=5) Sequence compare to the library NR of NCBI, finally obtain highly conserved sequence EBpcise_1072.Using this aim sequence as template, Using Primer Premier 3.0 and Methyl Primer Express v1.0 software, specific primer and spy are separately designed Needle, EBV probe are marked using 5'-FAM and 3'-TRAMA, and internal standard probe is marked using 5'-HEX and 3'-TRAMA.
Specific primer and probe sequence:
The preparation of embodiment two, kit
The present invention provides a kind of for detecting the kit of herpes-like virus EBV, and the kit includes containing embodiment One specific primer provided and the PCR reaction solution of probe, enzymatic mixture, positive reference substance, negative controls, standard items and interior Mark, in which:
PCR reaction solution: the final concentration of each ingredient and each ingredient is respectively as follows: the EBV of 0.4 μm of ol/L in the PCR reaction solution Upstream primer, the EBV downstream primer of 0.4 μm of ol/L, the EBV probe of 0.125 μm of ol/L, 0.4 μm of ol/L internal standard upstream primer, The internal standard downstream primer of 0.4 μm of ol/L, the internal standard probe of 0.125 μm of ol/L.
Enzymatic mixture: the enzymatic mixture is the mixed liquor of thermal starting enzyme (0.01U/ μ L) and UNG enzyme (0.03U/ μ L);
Positive reference substance: the positive reference substance is the purpose piece using pUC57 as the target fragment recombinant plasmid of carrier Disconnected nucleotide sequence is as shown in SEQ ID NO.7:
SEQ ID NO.7:
ACAGCTGTCCAGCAAGAAGAGGAGGTGGTAAGCGGTTCACCTTCAGGGGTAAGTAACCTGACCTCTCCA GGGCTCACATAAAGGGAGGCTTAGTATACATGCTTCTTGCTTTTCACAGGAACCTGGGGGCTAGTCTGGGTGGGTTT AGGCCCTCTTGGCCACGCAGCAGCTATTTCTGGTCGCATCAGAGCGCCAGGAGTCCACACAAATGTAAGAGGGGGTC TTCTACCTCTCCCTAGCCCTCATGGCC
Negative controls: the negative controls are physiological saline;
Standard items: the concentration gradient of the standard items is respectively 1 × 104Copy/ml, 1 × 105Copy/ml, 1 × 106It copies Shellfish/ml, 1 × 107Copy/ml, specifically, the standard items, which contain, recombinates matter by the genetic fragment of the EBV of carrier of pUC57 Grain;
Internal standard: the interior target nucleotide sequence is as shown in SEQ ID NO.8:
SEQ ID NO.8:
TCACAAGCAGGAGTGTGCCAGGAGAAGGCCAAACCATCCAGTGCCGGTGGTTTGACCACGAGGAGTGCATCCTGCAC GGAGTCACTGAGCTCGTGACCTCCACGCTGCTCGTCCCCTGCGCTATCGAGAGGGCACTCTCTGTGTCTCAGCTGGT GCCGCTGGCGCAGAGTGTTTTGGGCCCCTTAAAGCTCAGCATGGCTGGTTCTGGAGAGATGGAAAAGAGAAAGGATT TCCCCCATTTGGGTGCCTCGGGCATGTGGAGGAAGGTGGTCCGGCGAACGAAGCAGGGCTGCGTGAAGGGGATCTGA TAACCCACGTCAACGGAGAGCCAGTCCATGG。
Embodiment 3
The present embodiment provides the operating procedures that kit described in above-described embodiment 2 is used to detect EBV-DNA in sample:
One, biological sample
Oropharynx secretions are taken with cotton swab, merging seals inspection equipped in physiological saline test tube.Collect clinical sample 231.All clinical samples derive from Shenzhen Children's Hospital.
Two, sample extraction:
1) internal standard is taken to be added in sample treatment solution, additional proportion 1:50;
2) to addition 1ml sterile saline in the pipe of dress swab, sufficiently oscillation is shaken up, and extracts swab head;
3) it draws whole liquid to go in 1.5ml centrifuge tube, 12,000g centrifugations 5 minutes;
4) supernatant is removed, 50 μ l sample treatment solutions are added in precipitating, mix well, 100 DEG C of constant temperature are handled 10 minutes;
5) 4 DEG C or ice bath placement 2 minutes, 12,000g centrifugations 5 minutes are spare.
In the present embodiment, 2 have been selected to be detected from clinical sample altogether, respectively sample 1 and sample 2
Three, it is loaded into PCR reaction tube
The sample, positive reference substance, negative controls and each of step 2 extraction are separately added into each PCR reaction tube Each 3.5 μ L of the standard items of concentration, 15.7 μ L of PCR reaction solution, 0.8 μ L of enzymatic mixture, total volume are 20 μ L, pay attention to avoiding generating gas Bubble, mixes well after covering pipe lid, is transferred to amplification region.
Four, Fluorescence PCR
1) PCR reaction tube is sequenced and is put into amplification instrument sample cell, the title of each PCR reaction tube is set by corresponding sequence; By table 1, PCR response parameter is set;
2) PCR reaction condition is as shown in table 1
Table 1
Five, fluorescence channel selects
FAM Air conduct measurement sample is selected, HEX Air conduct measurement internal standard is selected.
Six, interpretation of result and testing result are explained
After reaction, result is saved.According to PCR instrument specification and fluorescence curve automatic or manual adjustment baseline and threshold Value.Highest point of the threshold value setting principle with threshold value just above negative control detection fluorescence.After setting, analysis " analysis is clicked (Analyze) " key can obtain the Ct value of each sample from report (Reports) window.
Under conditions of meeting quality control, sample to be tested inspection result is likely to occur following several situations:
1) if the channel FAM and the channel HEX do not occur S type amplification curve, testing result is invalid, in fact it could happen that pipe Interior inhibition should extract pattern detection again.
If 2) S type amplification curve occurs in the channel FAM, sample to be detected is the positive;
3) if obvious S type amplification curve does not occur in the channel FAM, and the Ct value in the channel HEX is less than or equal to 35, then for It is negative.
It is specific as shown in table 2:
Table 2
By detecting to fixed positive reference substance with negative controls, obtained PCR amplification curve is detected Fig. 1, Fig. 2, table 3 and table 4 are please referred to, Fig. 1 is provided by the present invention for negative control in detection herpes-like virus EBV kit The PCR amplification curve graph of product;Fig. 2 is provided by the present invention for positive reference substance in detection herpes-like virus EBV kit PCR amplification curve graph;The corresponding FAM and HEX channel C t value of Fig. 1 is as shown in table 3;The corresponding FAM and HEX channel C t value of Fig. 2 is such as Shown in table 4.From Fig. 1 and table 3 as can be seen that when detecting negative controls, there is not S type amplification curve in the channel FAM, and HEX is logical The Ct in road is less than 35, and from Fig. 2 and table 4 as can be seen that when detecting positive reference substance, it is bent that apparent S type amplification occurs in the channel FAM Line, reagent yin and yang attribute reference substance coincidence rate 100%.
Table 3
Ct
FAM -
HEX 32.15
Table 4
Ct
FAM 26.01
HEX 32.32
The testing result of sample 1 and 2 is detailed in Fig. 3, Fig. 4, table 5 and table 6, and Fig. 3 is the PCR amplification curve graph of clinical sample 1; Fig. 4 is the PCR amplification curve graph of clinical sample 2, and the corresponding FAM and HEX channel C t value of Fig. 3 is as shown in table 5, the corresponding FAM of Fig. 4 It is as shown in table 6 with HEX channel C t value.
Table 5
Table 6
Please refer to Fig. 5 and Fig. 6, expansion of the Fig. 5 provided by the present invention for detection herpes-like virus EBV kit Plays product Increase curve graph, wherein 1.~concentration 4. is respectively 1 × 107Copy/ml, 1 × 106Copy/ml, 1 × 105Copy/ml and 1 × 104Copy/ml;Fig. 6 is the canonical plotting for expanding standard items and establishing, and the copy number of sample to be tested can be acquired from Fig. 6.
It is provided by the present invention for the primer sets and kit beneficial effect for detecting herpes-like virus EBV:
One, kit provided by the invention operation is quickly, method is simple, detection sensitivity is up to 99.2%, specificity 100%, the EBV-DNA in unknown sample can fast and accurately be detected using the kit, be provided for diagnosis EBV infection Reliable experimental basis is particularly suitable for the popularization and application in clinical examination work.
Two, in PCR reaction solution include the specific primer for herpes-like virus EBV design, probe and for interior target Specific primer and probe have the advantages that expression is stable based on internal standard, it is possible to prevente effectively from the generation of false negative, and can also be compared with Destination gene expression amount is corrected well, so that the sensitivity and repeatability of the method for the present invention are improved, so that testing result It is more accurate and reliable.
The above description is only an embodiment of the present invention, is not intended to limit the scope of the invention, all to utilize this hair Equivalent process transformation made by bright description is applied directly or indirectly in other relevant technical fields, similarly wraps It includes in scope of patent protection of the invention.
SEQUENCE LISTING
<110>Shenzhen Children's Hospital
<120>for detecting the primer sets and kit of herpes-like virus EBV
<130> 2018
<160> 8
<170> PatentIn version 3.5
<210> 1
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 1
gcagctattt ctggtcgcat 20
<210> 2
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 2
gagggctagg gagaggtaga 20
<210> 3
<211> 21
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 3
agagcgccag gagtccacac a 21
<210> 4
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 4
ggcatgtgga ggaaggtggt 20
<210> 5
<211> 20
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 5
ccatggactg gctctccgtt 20
<210> 6
<211> 23
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 6
acgcagccct gcttcgttcg ccg 23
<210> 7
<211> 250
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 7
acagctgtcc agcaagaaga ggaggtggta agcggttcac cttcaggggt aagtaacctg 60
acctctccag ggctcacata aagggaggct tagtatacat gcttcttgct tttcacagga 120
acctgggggc tagtctgggt gggtttaggc cctcttggcc acgcagcagc tatttctggt 180
cgcatcagag cgccaggagt ccacacaaat gtaagagggg gtcttctacc tctccctagc 240
cctcatggcc 250
<210> 8
<211> 339
<212> DNA
<213>artificial sequence (Artificial Sequence)
<400> 8
tcacaagcag gagtgtgcca ggagaaggcc aaaccatcca gtgccggtgg tttgaccacg 60
aggagtgcat cctgcacgga gtcactgagc tcgtgacctc cacgctgctc gtcccctgcg 120
ctatcgagag ggcactctct gtgtctcagc tggtgccgct ggcgcagagt gttttgggcc 180
ccttaaagct cagcatggct ggttctggag agatggaaaa gagaaaggat ttcccccatt 240
tgggtgcctc gggcatgtgg aggaaggtgg tccggcgaac gaagcagggc tgcgtgaagg 300
ggatctgata acccacgtca acggagagcc agtccatgg 339

Claims (10)

1. a kind of for detecting the primer sets of herpes-like virus EBV, which is characterized in that including as shown in following nucleotide sequence Primer and probe:
EBV upstream primer:
5’-GCAGCTATTTCTGGTCGCAT-3’
EBV downstream primer:
5’-GAGGGCTAGGGAGAGGTAGA-3’
EBV probe:
5’-FAM-AGAGCGCCAGGAGTCCACACA-TAMRA-3’
Internal standard upstream primer:
5’-GGCATGTGGAGGAAGGTGGT-3’
Internal standard downstream primer:
5’-CCATGGACTGGCTCTCCGTT-3’
Internal standard probe:
5’-HEX-ACGCAGCCCTGCTTCGTTCGCCG-TAMRA-3’。
2. a kind of for detecting the kit of herpes-like virus EBV, which is characterized in that the kit includes PCR reaction solution, institute Stating PCR reaction solution includes the primer as shown in following nucleotide sequence and probe:
EBV upstream primer:
5’-GCAGCTATTTCTGGTCGCAT-3’
EBV downstream primer:
5’-GAGGGCTAGGGAGAGGTAGA-3’
EBV probe:
5’-FAM-AGAGCGCCAGGAGTCCACACA-TAMRA-3’
Internal standard upstream primer:
5’-GGCATGTGGAGGAAGGTGGT-3’
Internal standard downstream primer:
5’-CCATGGACTGGCTCTCCGTT-3’
Internal standard probe:
5’-HEX-ACGCAGCCCTGCTTCGTTCGCCG-TAMRA-3’。
3. according to claim 2 for detecting the kit of herpes-like virus EBV, which is characterized in that the PCR reaction Final concentration of 0.4 μm of ol/L of each primer in liquid, final concentration of 0.125 μm of ol/L of each probe.
4. according to claim 2 for detecting the kit of herpes-like virus EBV, which is characterized in that the kit It further include enzymatic mixture, the enzymatic mixture is the mixed liquor of thermal starting enzyme and UNG enzyme.
5. according to claim 2 for detecting the kit of herpes-like virus EBV, which is characterized in that the kit It further include positive reference substance and negative controls.
6. according to claim 5 for detecting the kit of herpes-like virus EBV, which is characterized in that the positive is right It is using pUC57 as the target fragment recombinant plasmid of carrier according to product, the nucleotide sequence of the purpose segment is as follows:
ACAGCTGTCCAGCAAGAAGAGGAGGTGGTAAGCGGTTCACCTTCAGGGGTAAGTAACCTGACCTCTCCAGGGC TCACATAAAGGGAGGCTTAGTATACATGCTTCTTGCTTTTCACAGGAACCTGGGGGCTAGTCTGGGTGGGTTTAGGC CCTCTTGGCCACGCAGCAGCTATTTCTGGTCGCATCAGAGCGCCAGGAGTCCACACAAATGTAAGAGGGGGTCTTCT ACCTCTCCCTAGCCCTCATGGCC。
7. according to claim 5 for detecting the kit of herpes-like virus EBV, which is characterized in that the feminine gender is right It is physiological saline according to product.
8. according to claim 2 for detecting the kit of herpes-like virus EBV, which is characterized in that the kit It further include containing using pUC57 as the standard items of the genetic fragment recombinant plasmid of the EBV of carrier, the concentration gradient of the standard items is divided It Wei 1 × 104Copy/ml, 1 × 105Copy/ml, 1 × 106Copy/ml, 1 × 107Copy/ml.
9. according to claim 2 for detecting the kit of herpes-like virus EBV, which is characterized in that the kit Further include internal standard, the interior target nucleotide sequence is as follows:
TCACAAGCAGGAGTGTGCCAGGAGAAGGCCAAACCATCCAGTGCCGGTGGTTTGACCACGAGGAGTGCATCCT GCACGGAGTCACTGAGCTCGTGACCTCCACGCTGCTCGTCCCCTGCGCTATCGAGAGGGCACTCTCTGTGTCTCAGC TGGTGCCGCTGGCGCAGAGTGTTTTGGGCCCCTTAAAGCTCAGCATGGCTGGTTCTGGAGAGATGGAAAAGAGAAAG GATTTCCCCCATTTGGGTGCCTCGGGCATGTG GAGGAAGGTGGTCCGGCGAACGAAGCAGGGCTGCGTGAAGGGGATCTGATAACCCACGTCAACGGAGAGCCAGTCCA TGG。
10. a kind of purposes of primer sets as described in claim 1 in the kit of preparation detection herpes-like virus EBV.
CN201810336564.0A 2018-04-16 2018-04-16 For detecting the primer sets and kit of herpes-like virus EBV Pending CN110387434A (en)

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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111041131A (en) * 2020-03-16 2020-04-21 广东永诺医疗科技有限公司 EB virus detection kit based on droplet type digital PCR

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Application publication date: 20191029