CN110322402A - Medical image super resolution ratio reconstruction method based on dense mixing attention network - Google Patents
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Abstract
The invention discloses a kind of medical image super resolution ratio reconstruction methods based on dense mixing attention network.The present invention introduces mixing attention mechanism on the basis of dense neural network, and neural network is made to focus more on channel and region containing abundant high-frequency information, the precision for accelerating network convergence, further promoting super-resolution.It mainly comprises the steps that and designs and build based on dense neural network and the network for mixing attention mechanism;Preprocessed data collection, data enhancing, constructs training sample;Training network model is lost using L2 until network model reaches convergence;In the super-resolution rebuilding stage, the medical image of low resolution is inputted, goes out final high-definition picture using trained network model Super-resolution Reconstruction.Method of the present invention is higher compared to the super-resolution method precision of mainstream, is a kind of effective medical image super resolution ratio reconstruction method.
Description
Technical field
The present invention relates to medical image super-resolution rebuilding technologies, and in particular to one kind is based on dense mixing attention network
Medical image super resolution ratio reconstruction method, belong to digital image processing field.
Background technique
Medical image is widely used in clinical diagnosis and treatment, but during obtaining medical image, due to hardware
Limitation, environment influence, and missing high-frequency information causes medical image resolution ratio low, fuzzy.From hardware point of view improve the above problem by
The limitation of manufacturing process and cost is improved from software respective, using image super-resolution method to the medical image of low resolution
Corresponding high-definition picture can efficiently be obtained by carrying out super-resolution rebuilding.
Present image super-resolution method mainly has three classes, is based on interpolation, the side based on modeling and based on study respectively
Method, the method based on study can be divided into the method based on rarefaction representation and the method based on convolutional neural networks.Based on interpolation
Method have the characteristics that computational efficiency is high, but be easily lost high frequency texture detailed information.Model-based method is using first
Information constrained solution space is tested, effect has a certain upgrade compared to the method based on interpolation, but when input image size is smaller, energy
The prior information of effective use is less, and super-resolution efect is poor.Method based on study is by learning low, high resolution graphics
The internal relation as between realizes super-resolution.In recent years, the super-resolution method based on convolutional neural networks achieves higher
Precision.However, the convolution kernel of convolutional neural networks coequally treats each channel and region of characteristic pattern, reduces network and contain
The channel of abundant high-frequency information and the feature representation ability in region.In addition to this, conventional convolution neural network is in propagated forward
Recall info can be lost, the thought of dense neural network can be introduced, a large amount of jump is added and links structure, repeatedly used features, further
Promote network performance.In conclusion the performance of the image super-resolution method based on study still has the space of promotion.
Summary of the invention
The technical problems to be solved by the present invention are: during obtaining medical image, due to hardware limitation, environment shadow
It rings, lacks caused by high-frequency information that medical image resolution ratio is low, fuzzy problem.
The present invention solves its technical problem, and the following technical solution is employed:
Medical image super resolution ratio reconstruction method provided by the invention is a kind of doctor based on dense mixing attention network
Image super-resolution rebuilding method is learned, this method is to introduce mixing attention mechanism on the basis of dense neural network, addition
Mixing attention mechanism unit makes neural network focus more on channel and region containing abundant high-frequency information, increases the spy of network
Ability to express is levied, the precision for accelerating network convergence, further promoting super-resolution.
The medical image super resolution ratio reconstruction method, comprising the following steps:
Step 1: designing and builds based on dense neural network and the network for mixing attention mechanism;
Step 2: pre-processing input picture, and data enhancing constructs training sample;
Step 3: training network model is lost using L2 until network model reaches convergence;
Step 4: in the super-resolution rebuilding stage, the medical image of low resolution is inputted, utilizes trained network model
Super-resolution Reconstruction goes out final high-definition picture.
The mixing attention mechanism refers to that network indicates with Enhanced feature while paying close attention to have abundant high-frequency information
Channel and region ability, have 2 cascade convolutional layers, active coatings in the mixing attention mechanism unit.
The dense neural network includes N (N >=8) a basic unit, there is N (N >=8) a cascade in each basic unit
Convolutional layer, active coating, one mixing attention mechanism unit of last cascade of each basic unit;In each basic unit with
Between basic unit, a large amount of dense jumps of addition link structure, extract deeper character representation.
In the above method, dense neural network can divide five stages, respectively feature extraction, feature Nonlinear Mapping,
Feature Dimension Reduction, deconvolution up-sampling, convolution obtain final output, in which: feature extraction phases are swashed using cascade convolution sum
Layer living, feature Nonlinear Mapping stage use bottleneck layer using dense neural network described in the above method, Feature Dimension Reduction stage
Dimensionality reduction is up-sampled using deconvolution, and convolution obtains final output.
In the above method, pretreatment described in step 2, data enhancing, are to cut to input picture, to cutting
The subgraph arrived carries out down-sampling operation, obtains corresponding low-resolution image, obtains more training samples using data enhancing.
In above method step 3, using the loss L based on L2 norm2The obtained high-definition picture of quantization super-resolution and
The similarity degree of true high-definition picture, training process are learnt using small lot, the expression formula of the loss function of use are as follows:
In formula: IHRFor true high-definition picture;ISRTo execute the high-definition picture that super-resolution obtains;H,W,C
The respectively size (length and width) and port number of input picture, n are the number of small lot study, and v is v spies in small lot n
Sign figure, k are k-th of channel of v characteristic patterns, and (i, j) is characterized the coordinate position in figure, Iv,i,j,kFor v characteristic patterns
Kth channel position be (i, j) pixel value.
In above method step 4, the medical image that the super-resolution rebuilding obtains is amplified by low-resolution imageIt obtains again,
Methods and techniques process proposed by the present invention extends realized software systems including method.
More convolution, activation can be arranged in the method for the present invention by the more basic units of setting or in basic unit
Layer, further increases super-resolution precision.It is all this method propose network foundation on be arranged more basic units or
The more convolution of setting, active coating in basic unit, and then the method for improving super-resolution precision is all inconsistent with the present invention
's.
The experimental results showed that (specific experiment data are referring to the description in specific implementation method), the method for proposition compares mainstream
Image super-resolution method in Y-PSNR (Peak Signal-to-Noise Ratio, PSNR) and structural similarity
There are the promotion of 0.146db-5.874dB and 0.1%-7.66% on (Structural similarity, SSIM) respectively.
The present invention has the advantages that following main compared with prior art:
Mixing attention mechanism is introduced, a kind of new mixing attention mechanism unit is proposed, adds in the network architecture
The mechanism unit can accelerate network convergence, and Enhanced feature indicates ability, further promotes the performance of network, the mixing attention
The structure design of mechanism unit has initiative;
Based on dense neural network, a large amount of dense jump connection structures of addition make full use of the spy of different phase, different scale
Sign makes gradient information be transmitted directly to network front layer, improves conventional neural networks and loses recall info, gradient in propagated forward
The problem of disappearance, network are degenerated, further promotes network performance;
The present invention constructs a kind of medical image super-resolution side based on mixing attention mechanism and dense neural network
Method improves network performance compared to the method for mainstream, and mixing attention mechanism is merged with dense neural network with pioneering
Property.
Detailed description of the invention
Fig. 1 is the structure chart of mixing attention mechanism unit proposed by the present invention.
Fig. 2 is the basic cell structure figure proposed by the present invention based on dense mixing attention network.
Fig. 3 is that the present invention is based on the network structures of the medical image super resolution ratio reconstruction method of dense mixing attention network
Figure.
Fig. 4 is the effect for the medical image super-resolution rebuilding that the present invention obtains again with other three kinds of method super-resolutions 2
Comparison diagram.
Specific embodiment
It is disclosed by the invention it is a kind of based on it is dense mixing attention network medical image super resolution ratio reconstruction method, be
Mixing attention mechanism is introduced on the basis of dense neural network, focuses more on neural network containing abundant high-frequency information
Channel and region, the precision for accelerating network convergence, further promoting super-resolution.It mainly comprises the steps that and designs and build
Based on dense neural network and the network for mixing attention mechanism;Preprocessed data collection, data enhancing, constructs training sample;Make
Training network model is lost with L2 until network model reaches convergence;In the super-resolution rebuilding stage, the doctor of low resolution is inputted
Image is learned, goes out final high-definition picture using trained network model Super-resolution Reconstruction.Method phase of the present invention
It is higher than the super-resolution method precision of mainstream, it is a kind of effective medical image super resolution ratio reconstruction method.
Below with reference to embodiment and attached drawing, the invention will be further described, but does not limit the present invention.
Medical image super resolution ratio reconstruction method provided by the invention based on dense mixing attention network, is dense
The basis of neural network introduces mixing attention mechanism, and the mixing attention mechanism unit of addition focuses more on neural network to contain
There are the channel and region of abundant high-frequency information, increase the feature representation ability of network, accelerates network convergence, further promotes oversubscription
The precision of resolution.
The medical image super resolution ratio reconstruction method of above-mentioned dense mixing attention network, comprising the following steps:
Step 1: designing and builds based on dense neural network and the network for mixing attention mechanism;
Step 2: pre-processing input picture, and data enhancing constructs training sample;
Step 3: training network model is lost using L2 until network model reaches convergence;
Step 4: in the super-resolution rebuilding stage, the medical image of low resolution is inputted, utilizes trained network model
Super-resolution Reconstruction goes out final high-definition picture.
As shown in Figure 1, mixing attention mechanism unit described in step 1 is by the mixing attention mechanism unit
There are 2 cascade convolutional layers, active coatings.The image that attention mechanism unit dimension is H*W*C is inputted, wherein H, W are image
Long and wide, C is port number, and process cascade convolution, activation twice obtain dimension as the descriptor τ of H*W*C:
τ=f (W2δ(W1x)),τ∈RC,
In formula: x is input, W1For the parameter of first layer convolution, first layer convolution executes the characteristic pattern channel that the factor is 16
Number dimensionality reduction, obtains the characteristic pattern that dimension is H*W*C/16, and δ (g) is RELU activation operation, W2For the parameter of second layer convolution,
Secondary convolution executes several litres of the characteristic pattern channel dimension that the factor is 16, and f (g) is sigmoid activation operation.Convolution, activation pair twice
Channel dimension carries out port number dimensionality reduction and several litres of channel dimension, the Description Matrix τ in the different channels of C correspondence of studyi, wherein i=0,
1,2...C, adaptive is assigned to the channel containing bulk redundancy low-frequency information for more sparse Description Matrix, so that neural network
Focus more on the channel containing abundant high-frequency information.Each Description Matrix τiSize be H*W, corresponding original input image i-th is logical
Each element in road.By convolution twice, activation, the region that original input image contains abundant high-frequency information is retained, is contained
The region of bulk redundancy low-frequency information is suppressed, the descriptor τ that will be obtainediHadamard product is carried out with the i-th channel of original input,
So that neural network focuses more on the region containing abundant high-frequency information in the i-th channel.By obtained descriptor and input picture
Hadamard is multiplied, and obtains the characteristic pattern by mixing attention mechanism unit.
The convolutional layer is the basic unit of convolutional neural networks, for extracting the different characteristic of input picture, first layer
Convolutional layer can only extract some rudimentary features such as levels such as edge, lines and angle, and the network of deeper can be from low-level features
The more complicated feature of iterative extraction.
The active coating is the basic unit of convolutional neural networks, for enhancing the non-of decision function and entire neural network
Linear characteristic, itself can't change convolutional layer, and common activation primitive has Sigmoid (S) function, RELU line rectification function
Deng.
In Fig. 3, design described in step 1 and build based on dense neural network and the network for mixing attention mechanism
It is divided into five stages, respectively feature extraction, feature Nonlinear Mapping, Feature Dimension Reduction, deconvolution up-sampling, convolution obtains finally
Output:
Stage one: feature extraction phases refer to the image contract data from input, construct the characteristic information of nonredundancy, are used for
Promote it is subsequent study with it is extensive, the feature of extraction in some cases can better than mankind's manual extraction feature.As shown in figure 3,
The present invention completes feature extraction, convolutional layer using cascade convolutional layer and RELU active coating after low-resolution image input
Parameter is set as 128 × 3 × 3 × 3, i.e. 128 sizes are the convolution kernel that 3 port numbers are 3.
Stage two: the feature Nonlinear Mapping stage refers to using the operator for being unsatisfactory for linear conditions, for completing vector sky
Between mapping (including the abstract vector space being made of function).As shown in figure 3, the present invention uses the dense mind in the middle part of network
Nonlinear Mapping is completed through network, the dense neural network used includes n basic unit, and each basic unit there are n
Cascade convolution, active coating, one mixing attention block of last cascade of basic unit, the parameter of convolutional layer is set in basic unit
Being set to 16 × 3 × 3, i.e. the convolution kernel that 16 sizes are 3 × 3, activation primitive uses RELU function, and the step-length of convolution operation is 1,
It is operated at edge using zero padding (zero padding), keeps the size of characteristic pattern consistent.Due to being added to a large amount of dense jumps
Link structure, different phase, different scale characteristic pattern be aggregating, with the intensification of the network number of plies, input the logical of convolution kernel
Road number is linearly increasing, and the port number of each convolution kernel of first layer convolution is 16 in each basic unit, later the volume of every layer of convolution
The port number of product core increases by 16 on the basis of upper one layer.
Stage three: the Feature Dimension Reduction stage, which refers to from the characteristic information comprising bulk redundancy or extraneous features, finds out main feature
Information, for reducing computation complexity.As shown in figure 3, the present invention uses bottleneck layer dimensionality reduction, bottleneck layer is one layer of convolutional layer, is used
In completing the mapping of higher dimensional space to lower dimensional space, the convolution kernel parameter of bottleneck layer is set as 256 × 1152 × 1 × 1, i.e., 256
A size is the convolution kernel that 1 port number is 1152, and the step-length of convolution operation is 1.
Stage four: the convolution kernel parameter of deconvolution up-sampling is set as 256 × 256 × 2 × 2, and the step-length of convolution operation is
2, it is operated at edge using zero padding (zero padding).
Stage five: convolution obtains final output, and the parameter of convolution kernel is set as 3 × 256 × 3 × 3, the step of convolution operation
A length of 1, it is operated at edge using zero padding (zero padding).
Pretreatment described in step 2, data enhancing, specific embodiment are to cut to input picture, are cut to big
The small subgraph for being 96 × 96 carries out bicubic down-sampling behaviour to the subgraph that cutting obtains using the imresize function of Matlab
Make, obtain the low-resolution image that corresponding size is 48 × 48, using data enhancing such as rotation, mirror image, obtains more
Training sample.
Experiment L2 described in step 3 loses training network model until network model is restrained, and specific embodiment is to use
Loss L based on L2 norm2The similarity degree of high-definition picture and true high-definition picture that quantization super-resolution obtains, instruction
Practice training process to learn using small lot (mini-batch), the number of small lot study is set as 16.The loss function of use
Expression formula are as follows:
In formula: IHRFor true high-definition picture;ISRTo execute the high-definition picture that super-resolution obtains;H,W,C
The respectively size (length and width) and port number of input picture, n are the number of small lot study, and v is v spies in small lot n
Sign figure, k are k-th of channel of v characteristic patterns, and (i, j) is characterized the coordinate position in figure, Iv,i,j,kImage is opened for v
The position in kth channel is the pixel value of (i, j).
Super-resolution rebuilding described in step 4, specific embodiment are that the medical image of low resolution is inputted network,
The high-definition picture exported, the medical image that the super-resolution rebuilding obtains are equivalent to the low-resolution image
Amplification It obtains again.
By experimental verification, dense mixing attention network of the invention can sufficiently be multiplexed different phase, different scale
Feature, further promote network performance;Mixing attention mechanism can be such that neural network focuses more on containing abundant high frequency letter
The channel and region of breath inhibit channel and region containing bulk redundancy information, accelerate network convergence, further promote internetworking
Energy.
In order to prove effectiveness of the invention, 400 are picked out clearly from the public data at American National lung cancer center concentration
The CT image that clear degree is high, details size abundant is 512 × 512 picks out 100 images as test set as training set.
Described in summary of the invention step 2, input picture is cut, the subgraph that size is 96 × 96 is cut to, uses Matlab's
Imresize function carries out the operation of bicubic down-sampling to the subgraph that cutting obtains, and obtains low point that corresponding size is 48 × 48
Resolution image obtains more training samples using data enhancing such as rotation, mirror image.
In experiment, chooses bicubic interpolation method and two kinds of representative methods based on convolutional neural networks and carry out pair
Than.For the fairness for guaranteeing comparison, each method is tested under identical hardware environment.
The two kinds of representative methods based on convolutional neural networks chosen are as follows:
The method that method 1:Kim et al. is proposed, bibliography are as follows: Kim J, Kwon Lee J, Mu Lee K.Accurate
image super-resolution using very deep convolutional networks[C]//Proceedings
of the IEEE conference on computer vision and pattern recognition.2016:1646-
1654.
The method that method 2:Tong et al. is proposed, bibliography are as follows: Tong Tong, Gao Qinquan one kind are based on intensive connection network
The Fujian image super-resolution method [P]: CN106991646A, 2017-07-28.
The hardware environment parameter setting of experiment:
Table 1
The evaluation index of selection:
The objective indicator for being widely used in evaluation image super-resolution effect has Y-PSNR (Peak Signal-to-
Noise Ratio, PSNR) and structural similarity (Structural similarity, SSIM), the present invention select PSNR and
SSIM is as the index objectively evaluated.In addition to this, time also conduct needed for the present invention will complete single image super-resolution
Reference objectively evaluates one of index.
Each super-resolution method objectively evaluates comparison:
Table 2
It can be seen that the present invention in Y-PSNR (PSNR) and structural similarity from the experimental data of 2 each method of table
(SSIM) have the promotion of 5.874dB and 7.66% respectively compared to bicubic interpolation method, compared to method 1 have respectively 0.259dB and
0.37% promotion, compared to the promotion that method 2 has 0.146dB and 0.1%.The time-consuming aspect of single-frame images super-resolution, bicubic
Interpolation method is most fast, and method 1, method 2, time-consuming of the invention are above Bicubic method, but in 0.5s, real-time is preferable.
The effect for each super-resolution method that Fig. 4 is shown has chosen four groups of grain details than more rich image, shows each
The effect of super-resolution method is the CT image of aorta, apex pulmonis portion, lung, the lobe of the lung respectively.The high-resolution that each method obtains
The comparison of image and true high-definition picture (Ground Truth, GT) as indicated, objectively evaluate index value mark accordingly
Below image.Compared to control methods, the image of super-resolution rebuilding of the present invention has preferable image sharpness, visual perception effect
Fruit is best, and image clearly, details be true, brightness uniformity, and the image that super-resolution obtains is closest to true picture.It is commented in conjunction with objective
Valence and subjective evaluation result, the present invention are a kind of effective medical image super resolution ratio reconstruction methods.
The medical image that the present invention is applicable in includes but is not limited to CT image, nuclear magnetic resonance (MRI) image, X-ray (X-ray) figure
Picture and Positron emission computed tomography (PET) image.
The present invention utilizes the advantages of dense neural network, sufficiently multiplexing different phase, the feature of different scale, further mentions
Network performance is risen, parameter amount is reduced, improves gradient and disappears and network degenerate problem;It the advantages of using mixing attention mechanism, mentions
A kind of new mixing attention mechanism unit is gone out, has added the mechanism unit in the network architecture and focus more on neural network and contain
There are the channel and region of abundant high-frequency information, accelerates network convergence, further promotes network performance;In conjunction with dense neural network and
Attention mechanism is mixed, a kind of effective medical image super-resolution reconstruction method is constructed.
The content being not described in detail in this specification belongs to the prior art well known to professional and technical personnel in the field.
Claims (10)
1. a kind of medical image super resolution ratio reconstruction method, it is characterized in that a kind of medicine figure based on dense mixing attention network
As super resolution ratio reconstruction method, this method is to introduce mixing attention mechanism, the mixing of addition on the basis of dense neural network
Attention mechanism unit makes neural network focus more on channel and region containing abundant high-frequency information, increases the mark sheet of network
Danone power, the precision for accelerating network convergence, further promoting super-resolution.
2. medical image super resolution ratio reconstruction method according to claim 1, it is characterised in that the following steps are included:
Step 1: designing and builds based on dense neural network and the network for mixing attention mechanism;
Step 2: pre-processing input picture, and data enhancing constructs training sample;
Step 3: training network model is lost using L2 until network model reaches convergence;
Step 4: in the super-resolution rebuilding stage, inputting the medical image of low resolution, utilizes trained network model oversubscription
It distinguishes and reconstructs final high-definition picture.
3. medical image super resolution ratio reconstruction method according to claim 2, it is characterised in that the mixing attention
Mechanism refers to that network indicates with Enhanced feature while paying close attention to the ability in the channel and region with abundant high-frequency information, this is mixed
Closing in attention mechanism unit has 2 cascade convolutional layers, active coatings.
4. medical image super resolution ratio reconstruction method according to claim 2, it is characterised in that: the dense nerve net
Network includes N number of basic unit, there is N number of cascade convolutional layer, active coating in each basic unit, N >=8, each basic unit
Finally cascade a mixing attention mechanism unit;In each basic unit between basic unit, a large amount of dense jumps of addition
Link structure, extracts deeper character representation.
5. medical image super resolution ratio reconstruction method according to claim 2, it is characterised in that dense neural network point five
A stage, respectively feature extraction, feature Nonlinear Mapping, Feature Dimension Reduction, deconvolution up-sampling, convolution obtains final defeated
Out, in which: feature extraction phases use cascade convolution sum active coating, and the feature Nonlinear Mapping stage uses claim 4 institute
The dense neural network stated, Feature Dimension Reduction stage are used bottleneck layer dimensionality reduction, are up-sampled using deconvolution, and convolution obtains final defeated
Out.
6. medical image super resolution ratio reconstruction method according to claim 2, it is characterised in that pre- place described in step 2
Reason, data enhancing, are cut to input picture, are carried out down-sampling operation to the subgraph that cutting obtains, are obtained corresponding low
Image in different resolution obtains more training samples using data enhancing.
7. medical image super resolution ratio reconstruction method according to claim 2, it is characterised in that in step 3, using being based on
The loss L of L2 norm2The similarity degree of high-definition picture and true high-definition picture that quantization super-resolution obtains, was trained
The study of Cheng Caiyong small lot, the expression formula of the loss function of use are as follows:
In formula: IHRFor true high-definition picture;ISRTo execute the high-definition picture that super-resolution obtains;H, W, C difference
For the size (length and width) and port number of input picture, n is the number of small lot study, and v is v features in small lot n
Figure, k are k-th of channel of v characteristic patterns, and (i, j) is characterized the coordinate position in figure, Iv,i,j,kCharacteristic pattern is opened for v
The position in kth channel is the pixel value of (i, j).
8. medical image super resolution ratio reconstruction method according to claim 2, it is characterised in that in step 4: described is super
The medical image that resolution reconstruction obtains is amplified by low-resolution imageIt obtains again,
9. according to claim 1 to any medical image super resolution ratio reconstruction method in 8, it is characterised in that the side of proposition
Method and technical process extend realized software systems including method.
10. according to claim 1 to any medical image super resolution ratio reconstruction method in 8, it is characterized in that passing through setting
More convolution, active coating are arranged in more basic units in basic unit, and then improve super-resolution precision.
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