CN109727197A - A kind of medical image super resolution ratio reconstruction method - Google Patents

A kind of medical image super resolution ratio reconstruction method Download PDF

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CN109727197A
CN109727197A CN201910004840.8A CN201910004840A CN109727197A CN 109727197 A CN109727197 A CN 109727197A CN 201910004840 A CN201910004840 A CN 201910004840A CN 109727197 A CN109727197 A CN 109727197A
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image
resolution
medical image
resolution ratio
residual error
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CN109727197B (en
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柏正尧
陶劲宇
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Yunnan University YNU
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Abstract

A kind of medical image super resolution ratio reconstruction method extracts the characteristic information of image by convolutional layer and is encapsulated in a capsule structure;Then, pass through routing infrastructure layer operation input and the high-resolution details of forecast image;Finally, it carries out the capsule residual error characteristic image that obtained routing infrastructure is predicted to merge reconstruct with interpolation low-resolution image, the high-definition picture that resolution ratio is substantially improved is obtained, the invention proposes a kind of new use routing infrastructure residual error networks to carry out super-resolution rebuilding to medical image.It is better than tradition CNN method such as SRCNN in terms of accuracy, real-time, picture quality, this method precision is high, reconstruction speed is fast, robustness is good, has broad application prospects in fields such as the computer-aided diagnosis systems such as medical conditions.

Description

A kind of medical image super resolution ratio reconstruction method
Technical field
The present invention is medical image super resolution ratio reconstruction method, is suitable at machine learning, pattern-recognition and medical image Manage technical field.
Background technique
Medical image is widely used in computer-aided diagnosis, as radioscopic image, computed tomography, nuclear-magnetism are total Vibration image etc. changes modern medicine.Therefore the medical image for obtaining high quality plays to Guan Chong Precise Diagnosis illness reason The effect wanted, but the hardware device of high-definition picture it is expensive and and imaging technique in certain circumstances limit System, it is necessary to the image of high-resolution and clarity is obtained by way of software.In order to more preferably identify and determine disease Exact position, it is desirable to obtain as far as possible clearly CT, MRI image provides better auxiliary diagnosis for doctor, related convenient for observation Feature even subtle texture.Before the study of data-driven machine is widely used, traditional image rebuilding method is mostly used greatly The form of optimization problem, it will be observed that LR image and model estimation between cost minimization, generally use some form of Regularization term.However, these non-learning methods usually have a limitation, they need the priori indicated about good data to know Know, the precision that can be improved is also limited.
With the development of deep learning, the super-resolution of image shows the raising that is greatly improved.Wherein, super-resolution convolution Network (SRCNN) is concerned due to its network structure is simple, recovery precision is high.But the required training time is longer, dependent on small The contextual information of image-region, training convergence is too slow, and network is used only for single scale.Designing a kind of can reach real-time It is required that possess it is higher reconstruction signal-to-noise ratio and structural similarity super resolution ratio reconstruction method have in clinical application it is of crucial importance Meaning, better booster action played to diagnosis various diseases, the super-resolution rebuilding of medical image is computer view One research hotspot in feel field.
Summary of the invention
The purpose of the present invention is to medical image super-resolution rebuildings, and in the presence of rebuilding, speed is slow, reconstructed image quality is low The disadvantages of, existing method for reconstructing is unable to reach high-precision while meeting requirement of real time.It is proposed a kind of routing infrastructure residual error net The medical image super resolution ratio reconstruction method of network.
The technical solution adopted by the present invention is that: a kind of medical image super resolution ratio reconstruction method, comprising:
1) data set source The Cancer Imaging Archive (TCIA), the database are the medicine of cancer research The Open Access Journals database of image;
2) pretreatment such as it is normalized, rotates, expanding to medical image;
3) pass through Training mode with capsule residual error characteristic pattern of the depth network structure based on routing to original image Learn its deeper feature;
4) after precisely obtaining low resolution to high-resolution mapping relations, the capsule that obtained routing infrastructure is predicted is residual Poor characteristic image carries out merging reconstruct with interpolation low-resolution image;
5) image after reconstructing has obtained higher resolution ratio and more preferably PSNR, the indexs such as SSIM.
Invention herein is, using Tensorflow as back-end engine, to operate in GPU work based on deep learning frame Keras On standing, the test platform that uses: processor is Intel i7-7700 CPU, inside saves as 16GB, video card NVIDIA GeForce GTX 1070.Since GPU video memory is little, so larger neural network can not be run in existing machine, this is also This experiment uses small-scale the reason of training neural network after doing image preprocessing.In order to existing deep learning method into One quantitative comparison of row, herein assesses the method for proposition using identical TCIA medical images data sets.
There is the method for many reconstruction and study for medical image super-resolution rebuilding at present, but rebuilds speed and again Building quality always is one of the significant challenge faced in super-resolution rebuilding task.Selected from TCIA data set parts of images into Row experiment, the detection effect figure of the networks and this paper network such as comparison SRCNN, it can be seen that context of methods is to the super-resolution in image Rate reconstruction has better PSNR, SSIM and lower reconstruction time.
Effect of the invention is: the new use routing infrastructure residual error network of one kind being proposed to carry out oversubscription to medical image Resolution is rebuild.Firstly, extracting the characteristic information of image by convolutional layer and being encapsulated in a capsule structure;Then, pass through road By structure sheaf operation input and the high-resolution details of forecast image.Finally, the capsule residual error that obtained routing infrastructure is predicted Characteristic image carries out merging reconstruct with interpolation low-resolution image, obtains the high-definition picture that resolution ratio is substantially improved.We Method is better than tradition CNN method such as SRCNN in terms of accuracy, real-time, picture quality, this method precision is high, it is fast to rebuild speed, Robustness is good, has broad application prospects in fields such as the computer-aided diagnosis systems such as medical conditions.
Detailed description of the invention
Fig. 1 is the network topology structure figure that the present invention uses;
Fig. 2 is the capsule residual error characteristic pattern that the present invention uses;
Fig. 3 is the routing infrastructure flow through a network figure that the present invention uses;
Fig. 4 (a) is the reconstruction effect picture original image that present invention amplification scale is 3;
Fig. 4 (b) is the reconstruction effect picture SRCNN reconstruction figure that present invention amplification scale is 3;
Fig. 4 (c) is that the reconstruction effect picture DRCN that present invention amplification scale is 3 is rebuild;
Fig. 4 (d) is the reconstruction effect picture VDSR reconstruction figure that present invention amplification scale is 3;
Fig. 4 (e) is the reconstruction effect picture reconstruction figure of the present invention that present invention amplification scale is 3.
Specific implementation method
See that Fig. 1, Fig. 2, Fig. 3, Fig. 4 (a)-Fig. 4 (e), a kind of medical image super resolution ratio reconstruction method are mentioned by convolutional layer It takes the characteristic information of image and is encapsulated in a capsule structure;Then, pass through routing infrastructure layer operation input and forecast image High-resolution details.Finally, by the capsule residual error characteristic image and interpolation low-resolution image of the prediction of obtained routing infrastructure Fusion reconstruct is carried out, the high-definition picture that resolution ratio is substantially improved is obtained;Method includes:
1) data set source The Cancer Imaging Archive (TCIA), the database are the medicine of cancer research The Open Access Journals database of image;
2) pretreatment such as it is normalized, rotates, expanding to medical image;
3) pass through Training mode with capsule residual error characteristic pattern of the depth network structure based on routing to original image Learn its deeper feature;
4) after precisely obtaining low resolution to high-resolution mapping relations, the capsule that obtained routing infrastructure is predicted is residual Poor characteristic image carries out merging reconstruct with interpolation low-resolution image;
5) image after reconstructing has obtained higher resolution ratio and more preferably PSNR, the indexs such as SSIM.
Target of the present invention is medical image super-resolution rebuilding, which is considered as one The transition problem of a mode, i.e. medical image are first mode, and capsule residual error characteristic pattern is second mode;It is improved using one Convolutional neural networks simulate the mapping relations between first mode and second mode.
Medical image super resolution ratio reconstruction method of the present invention is: using an improved convolutional neural networks simulation Mapping relations between first mode and second mode;It is indicated between Current Situation of Neural Network reconstruct image and standard drawing with loss function Error;The error that iterates in the training process loss function, when loss function is as small as possible, training obtains model and can It is enough effectively to extract to medical image low resolution to high-resolution mapping principle, HR is gone out by the regular accurate reconstruction acquired Medical image.Entire medical image super-resolution rebuilding process by the feature extraction of image capsule residual error, neural network mapping study, The synthesis three parts of reconstruct image form.
The present invention is based on the minds that routing infrastructure residual error neural network architecture design one can effectively extract characteristics of image Through network;The network includes extraction and feature reconstruction two parts of feature;The thought of the network is to propose that has a routing knot The residual error neural network of structure replaces pondization to operate, improves effective benefit to feature with dynamic routing operation in the network architecture With the capsule residual error characteristic image and interpolation for reducing the loss of a large amount of characteristic informations of image, and obtained routing infrastructure being predicted Low-resolution image carries out fusion reconstruct, based on the reconstruction image after comprehensive characteristics information have higher resolution ratio and PSNR,SSIM。
The depth network that the present invention uses be one can predicted characteristics detection probability repetition framework, each layer of convolutional layer it There are multiple same routing infrastructure networks to connect afterwards, convolution kernel size is 9x9, and has one after each convolutional layer Activation primitive ReLU;It is a size after several pieces continuous for 3x3, the routing layer that step-length is 1, effect is to reduce image point Resolution obtains the depth characteristic for extracting capsule residual image;The glue for the routing infrastructure prediction that feature reconstruction part is Capsule residual error characteristic image carries out merging reconstruct with interpolation low-resolution image;The input of depth network is the low resolution after interpolation Medical image, output are then the high-resolution HR medical images after reconstruct.

Claims (5)

1. a kind of medical image super resolution ratio reconstruction method, it is characterised in that: extract the characteristic information of image simultaneously by convolutional layer It is encapsulated in a capsule structure;Then, pass through routing infrastructure layer operation input and the high-resolution details of forecast image;Most Afterwards, it carries out the capsule residual error characteristic image that obtained routing infrastructure is predicted to merge reconstruct with interpolation low-resolution image, obtain The high-definition picture that resolution ratio is substantially improved;Method includes:
1) data set source The Cancer ImagingArchive, the database are the openings of the medical image of cancer research Obtain database;
2) pretreatment such as it is normalized, rotates, expanding to medical image;
3) learnt with capsule residual error characteristic pattern of the depth network structure based on routing to original image by Training mode Its deeper feature;
4) after precisely obtaining low resolution to high-resolution mapping relations, the capsule residual error of obtained routing infrastructure prediction is special Sign image carries out merging reconstruct with interpolation low-resolution image;
5) image after reconstructing has obtained higher resolution ratio and more preferably PSNR, SSIM index.
2. a kind of medical image super resolution ratio reconstruction method according to claim 1, which is characterized in that by the medical image Super resolution ratio reconstruction method is considered as the transition problem of a mode, i.e. medical image is first mode, and capsule residual error characteristic pattern is Second mode;Using the mapping relations between an improved convolutional neural networks simulation first mode and second mode.
3. a kind of medical image super resolution ratio reconstruction method according to claim 1, which is characterized in that described to use receptive field Bigger capsule residual error depth network substitutes traditional CNN network;The first mould is simulated using an improved convolutional neural networks Mapping relations between formula and second mode;The mistake between current depth network reconfiguration figure and standard drawing is indicated with loss function Difference;The error that iterates in the training process loss function, when loss function is as small as possible, training obtains model can have Effect is extracted to medical image low resolution to high-resolution mapping principle, goes out HR medicine by the regular accurate reconstruction acquired Image;Entire medical image super-resolution rebuilding process is by the feature extraction of image capsule residual error, depth network mapping study, reconstruct The synthesis three parts of figure form.
4. a kind of medical image super resolution ratio reconstruction method according to claim 1 or 2 or 3, which is characterized in that be based on road The neural network of characteristics of image can be effectively extracted by structural residual neural network architecture design one;The network includes feature Extraction and feature reconstruction two parts;The thought of the network is to propose the residual error neural network with routing infrastructure, that is, is existed It replaces pondization to operate with dynamic routing operation in network structure, improves the effective use to feature, reduce the big measure feature letter of image The loss of breath, and carry out the capsule residual error characteristic image of obtained routing infrastructure prediction to merge weight with interpolation low-resolution image Structure is having higher resolution ratio and PSNR, SSIM based on the reconstruction image after comprehensive characteristics information.
5. a kind of medical image super resolution ratio reconstruction method according to claim 1 or 2 or 3, which is characterized in that use Depth network is the repetition framework of an energy predicted characteristics detection probability, has multiple same routings after each layer of convolutional layer Structural network connects, and convolution kernel size is 9x9, and have an activation primitive ReLU after each convolutional layer;Continuous It is a size after several pieces for 3x3, the routing layer that step-length is 1, effect is to reduce image resolution ratio, and it is residual to obtain extraction capsule The depth characteristic of difference image;The capsule residual error characteristic image and interpolation for the routing infrastructure prediction that feature reconstruction part is Low-resolution image carries out fusion reconstruct;The input of depth network is the low resolution medical image after interpolation, and output is then weight High-resolution HR medical image after structure.
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CN110866870A (en) * 2019-10-29 2020-03-06 中山大学 Super-resolution processing method for amplifying medical image by any multiple
CN110866870B (en) * 2019-10-29 2023-04-28 中山大学 Super-resolution processing method for amplifying medical image by any multiple
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