CN109554461B - The biomarker and its detection kit of one group of detection primary Hemophagocytic Lymphohistiocytosis - Google Patents

The biomarker and its detection kit of one group of detection primary Hemophagocytic Lymphohistiocytosis Download PDF

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CN109554461B
CN109554461B CN201811555516.7A CN201811555516A CN109554461B CN 109554461 B CN109554461 B CN 109554461B CN 201811555516 A CN201811555516 A CN 201811555516A CN 109554461 B CN109554461 B CN 109554461B
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汝昆
蔺亚妮
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Tianjin Jiankang Huamei Medical Diagnosis Technology Co.,Ltd.
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Abstract

The present invention provides the biomarkers and its detection kit of one group of detection primary HLH, are related to technical field of molecular biology.The biomarker for detecting primary HLH is mutated gene group, set including PRF1, UNC13D, STX11, STXBP2, SH2D1A, XIAP, ITK, CD27, MAGT1, RAB27A, LYST, AP3B1, BLOC1S6, TCN2, IL2RG mutated gene of totally 15 genes, exon region carry 411 mutational sites altogether.Detection primary HLH kit includes the primer for expanding mutated gene in the mutated gene group of primary HLH.The kit has many advantages, such as that detection efficiency height, mutated gene broad covered area, recall rate are high, and it is more accurate, authoritative to interpret report using medicine given by the detection kit.

Description

The biomarker of one group of detection primary Hemophagocytic Lymphohistiocytosis And its detection kit
Technical field
The present invention relates to technical field of molecular biology, and in particular to biomarker-mutation of one group of detection primary HLH Gene group and its detection kit.
Background technique
Hemophagocytic syndrome (hemophagocytic syndrome, HPS) is also known as Hemophagocytic lymphocyte Hyperplasia disease (hemophagocytic lymphohistiocytosis, HLH) is a kind of blood of rapid, high case fatality rate that is in progress System critical illness, is divided into primary and secondary two class, and different types of HLH therapeutic strategy and lapsing to has differences.It is clinical It is mainly shown as persistent fever, hepatosplenomegaly, laboratory checks that feature is whole blood trace elements, triglycerides (triglyceride, TG) and serum ferritin (serum ferritin, SF) increase, fibrinogen (fibrinogen, FIB it) reduces, can find phage-displayed peptide phenomenon at positions such as marrow, spleen, lymph nodes, serious patient can be fatal.According to disease Cause divides HLH for primary HLH (primary hemophagocytic lymphohistiocytosis, pHLH) and secondary Property HLH (secondary hemophagocytic lymphohistiocytosis, sHLH) two class.PHLH patient is due to coding The gene defect for participating in certain protein of above-mentioned immune response process, lead to the cytotoxicity defect of CTL and NK cell and Morbidity.SHLH can be caused by a variety of pathogenic factors, according to cause of disease difference can be divided into infection correlation HLH (including bacterium, fungi, The infection such as virus, protozoon), malignancy-associated HLH (including malignant lymphoma, leukaemia etc.) and autoimmunity disease correlation HLH (including juvenile idiopathic arthritis, Still disease) etc..
Current specific pHLH related gene include PRF1, UNC13D, STX11, STXBP2, LYST, RAB27A, AP3B1, SH2D1A, XIAP etc..Lian Hongyun etc. (2013) is in " children's Hemophagocytic Lymphohistiocytosis UNC13D base Because of Mutation Screening and clinical meaning " in disclose using direct Sequencing method in conjunction with round pcr, to 34 HLH infant UNC13D Gene extron code area carries out Mutation Screening, it was found that p.R256X, p.P374T, p.I410L and p.A397T mutation.Yuan Yuan (2013) mutation of UNC13D gene is disclosed in " UNC13D the and STX11 gene studies of hemophagocytic syndrome in children " Have: the mutation of p.R414L, p.I410L, p.R682G, p.K867E, p.R921H etc., STX11 gene have: p.R49Q etc..At present Disclosed pHLH related gene and mutational site are less, and detection covering surface when for gene diagnosis is small, and verification and measurement ratio is low.
The diagnosis of HLH is mainly lacked according to HLH diagnosis guide (2004), clinical manifestation and laboratory inspection item at present Weary specificity, therefore clinically more difficult identification pHLH and sHLH.Parent is consanguineous marriage or has specific family history to facilitate pHLH Diagnosis, 70%~80% pHLH falls ill within 1 years old, therefore age of onset has important prompt to anticipate the diagnosis of pHLH Justice.In addition, certain Special Clinical Manifestations of pHLH also contribute to antidiastole.Flow cytometry can detect pHLH patient NK cell And the GAP-associated protein GAP of CTL is horizontal, such as perforin, SAP, XIAP and CD107a etc. facilitate antidiastole.Gene mutation analysis is The goldstandard of pHLH diagnosis, can detect that 30%~70% pHLH patient at present.Therefore, gene mutation, which is not detected, to arrange Except pHLH, reason may be still have current unknown gene or current detection set meal range can not yet cover it is all known Mutation.
The method of detection pHLH relates generally to cellular morphology, flow cyctometry and molecular biology etc., wherein molecular biosciences Experimental method mainly has nest-type PRC, generation sequencing etc..PCR method cannot intuitively obtain specific mutant nucleotide sequence, and one The generation method of sequencing is influenced by sequencing throughput, can not disposably detect whole exon regions of multiple genes.And two generations The detection method as a kind of high throughput is sequenced, disposably can accurately measure the exon sequence of multiple genes, make precisely to control Treatment is possibly realized.Since pHLH associated gene mutation site is numerous, and existing known mutational site is less, in order to make pHLH gene What is diagnosed is more comprehensive, and covering surface is wider, and providing more mutational sites and its detection kit becomes inevitable trend.
Summary of the invention
The purpose of the present invention is to provide the mutated gene group of one group of detection primary HLH and its detection kits, overcome Problems of the prior art, improve the accuracy of the diagnosis to primary HLH.
One aspect of the present invention provides the biomarker of one group of detection primary HLH, and the biomarker is mutation base Because of group, the mutated gene group include PRF1, UNC13D, STX11, STXBP2, SH2D1A, XIAP, ITK, CD27, The set of MAGT1, RAB27A, LYST, AP3B1, BLOC1S6, TCN2, IL2RG mutated gene of totally 15 genes.
Specifically, the exon region of the mutated gene carries 411 mutational sites altogether;
411 mutational sites are as shown in table 1:
Table 1: primary HLH mutated gene group
Another aspect of the present invention provides reagent of the biomarker in preparation detection primary HLH of primary HLH a kind of Application in box.
The kit includes the reagent for detecting 411 mutational sites described in claim 1.
Another aspect of the present invention additionally provides a kind of kit for detecting primary HLH, and the kit includes: to be used for Detect the reagent in 411 above-mentioned mutational sites.
The detection reagent includes as shown in table 2 for expanding the PCR primer in 411 above-mentioned mutational sites:
Table 2: the 411 mutational site the primers of detection primary HLH
The detection kit further includes the reagent that genomic DNA is made to the library for sequencing, this kind of reagent is Reagent commonly used in the art, as long as can satisfy requirement of the PCR amplification to genomic DNA quality.The reagent preparation Method is this field customary preparation methods, preferably commercially available, such as: the fast run-up library kit (Ion of DNA was sequenced in two generations Torrent), two generations sequencing rapid DNA is built library kit (Illumina), and NGS builds library kit (Illumina) etc..
The kit further includes being expanded for the reagent that two generations were sequenced using amplimer provided by the invention The individual chip length arrived is 275bp or so, in conjunction with two generation sequencing technologies, is able to detect in mutated gene group of the present invention Whole exon regions.
Wherein the reagent for the sequencing of two generations is reagent commonly used in the art, as long as can satisfy to gained sequence Column carry out the requirement of two generations sequencing.The preparation method of reagent thereof be this field customary preparation methods, it is preferably commercially available can , such as: two generation sequencing library quantification kits, sequencing kit etc..
The kit further includes dNTP solution, and archaeal dna polymerase is positive right for the reagent of isolated or purified nucleic acid According to and/or negative control.
Reagent for isolated or purified nucleic acid can be Backman magnetic bead.
Preferably, the positive control is the positive control of this field routine, preferably comprising of the present invention prominent Become the genomic DNA stock solution of mutant gene sequence or the matter comprising mutant gene sequence in corresponding mutated gene group in gene group Grain is used as positive control.
Preferably, the negative control is the negative control of this field routine, preferably confirmed derived from Healthy People Wild type gene group DNA sequence dna storing liquid not comprising mutant gene sequence.
Sample used is the tissue of test object, as long as the genomic DNA of test object can be extracted from detection sample ?.
Preferably, detection sample used be one or more of peripheral blood, marrow, solid tissue sample, more preferably Ground, detection sample are peripheral blood.
A kind of application method of kit of the present invention comprising following steps:
(1) it using peripheral blood, marrow or the solid tissue sample of detection kit of the present invention extracting test object, mentions Take genomic DNA;
(2) with multiple PCR primer to the exon of 15 primary HLH related genes described in invention in genomic DNA Region is expanded;
(3) library for the sequencing of Ion Torrent microarray dataset is made in the resulting segment of amplification in step (2);
(4) gained DNA library in step (3) is sequenced, obtains lower machine data;
(5) bioinformatic analysis is carried out to the lower machine data in (4), is then interpreted using medicine unscrambling data library Make diagnosis.
Reagent used in the present invention and raw material can be obtained through commercial channels, for example, it is commercially available purchase or be commercially synthesized.
Compared with prior art, positive and beneficial effect of the invention is:
The mutated gene group of one group of detection primary HLH provided by the invention and its detection kit can be used for screening original Hair property HLH mutated gene group, in conjunction with high throughput sequencing technologies, may be implemented molecular biology level to primary HLH into Row diagnosis, making anticipation especially for the subsequent orientation treatment of disease and effect has special advantage.It is provided by the invention Detection kit has many advantages, such as that detection efficiency height, mutated gene broad covered area, recall rate are high, is given using the detection kit It is more accurate, authoritative that medicine out interprets report.
Specific embodiment
Below by specific embodiments of the present invention will be described in detail.In order to avoid excessive unnecessary details, It will not be described in detail in following embodiment to belonging to well known structure or function.In addition to being defined, institute in following embodiment Technical and scientific term has the identical meanings being commonly understood by with those skilled in the art of the invention.
The screening of 1 Chinese population primary HLH mutated gene group of embodiment
Material and method:
In blood disease hospital, the Chinese Academy of Medical Sciences and magnificent medical diagnosis center in November, 2017 of coordinating to 2018 8 In the patient of moon diagnosis, according to following standard, we carry out continuity and enter group (41).
Inclusion criteria are as follows: be diagnosed as the patient of HLH through clinical symptoms and laboratory inspection, and screen and need to carry out To carry out the case that auxiliary is confirmed whether it is HLH, the diagnostic result of 41 patients is as shown in table 3 for genetic test.
3 patient's diagnostic result list of table:
Collection 3mL peripheral blood in patients extraction genomic DNA is to be measured, which passes through Chinese Academy of Medical Sciences's blood disease hospital Ethics Committee's approval.
1. sample process: genome (is purchased from Tiangeng biochemical technology Co., Ltd, goods using DNA extraction kit in sample Number: DP318-03) be stripped, concrete operation method referring to kit operation instructions.
2. the building in library: choose testing gene PRF1, UNC13D, STX11, STXBP2, SH2D1A, XIAP, ITK, The exons coding district of CD27, MAGT1, RAB27A, LYST, AP3B1, BLOC1S6, TCN2 and IL2RG gene and flank Part of intron region, using Ion amplicon sequencing library building kit 2.0-LV96 (be purchased from Thermo Fisher company, Article No.: 4475345) multiple PCR method is carried out to genomic DNA and builds library, the specific steps are as follows:
(1) target area of PCR amplification genomic DNA: pure water is 1. added into DNA sample according to concentration and is diluted to 5ng/ μ l, including pool1 and pool2, establish reaction system respectively: 5X Ion AmpliSeqTM2 μ l, 2X Ion of HiFi Mix AmpliSeqTM3 μ l of Primer Pool 5 μ l, genomic DNA 5ng/ μ l, adds ddH2It is 10 μ l that O, which is supplemented to total volume,;2. plus 1400rpm brief centrifugation is covered, MixMate 2000r 5s is mixed, and 1400rpm brief centrifugation carries out PCR, and reaction condition is as follows: Kinase, 99 DEG C of maintenance 2min, 99 DEG C of denaturation 15s, 60 DEG C of annealing/extension 4min, 17 circulations, 10 DEG C maintain.
(2) digestion: pool1 reaction solution is transferred in pool2-PCR pipe, the FuPa of 1.9 μ l is added by centrifugation PCR pipe Reagent is mixed after sealing, and centrifugation, soft be vortexed are centrifuged again, and endonuclease reaction condition is as follows: 50 DEG C, 55 DEG C, and 60 DEG C of each reactions 20min;10 DEG C of reaction 1h.
(3) it expands effective library: 1. dissolving Switch Sloution, respective volume is added into each digestion products The Switch Solution and Barcode diluted, component are as follows: 22 μ l, Switch Solution of digestion products, 4 μ l, 2 μ l of Barcode, 28 μ l of total volume;2. the DNA ligase of 2 μ l is added in every hole, reaction condition is as follows after mixing: 22 DEG C of reactions 30min, 72 DEG C of reactions 10min, 10 DEG C of reaction 1h.
(4) purify the library not expanded: 1. 45 μ l AMPure Beads, vortex 5min are added in every hole in DNA library (1800rpm) is placed at room temperature for 5min, moves to experimental plate on magnetic frame after centrifugation, puts to clarifying and then discarding supernatant, is added The alcohol of 150 μ l fresh 70%, rotation Ep pipe two enclose or move left and right 96 orifice plates, discard alcohol;2. air-drying magnetic after coming again Pearl;EP pipe is removed, the Low TE that 100 μ l are added disperses magnetic bead, and soft be vortexed mixes;3. being placed at room temperature for 2min to move back to magnetic frame On, library is shifted after clarifying into clean EP pipe.
3. prepared by template: specific to walk with reference to the operation instructions of Ion Torrent sequenator corollary equipment One Touch It is rapid as follows:
(1) it dilutes library and quantifies: being 1. centrifuged the library gradient dilution built up after sufficient vortex to 200 times;2. standard 10 times of gradient dilutions of product are to 6.8pM, 0.68pM, 0.068pM, 7500 instrument of ABI, Ion AmpliSeqTMDNA library reactant It is as follows: 2 × Master Mix 5 μ l, 20 × TaqMan 0.5 μ l, sample (standard items) 4.5 μ l, 10 μ of total volume;React item Part is as follows: 50 DEG C of maintenances 2min, 95 DEG C of 2min, 95 DEG C of denaturation 15s, 60 DEG C of annealing/extension 1min, 40 recycle.
(2) Water-In-Oil PCR amplification: 1. the library sufficient vortex for being diluted to 200 times is mixed, reaction system is as follows: 2000 μ l, Ion P1 of Master MixTM120 μ l, Ion P1 of Enzyme MixTMIon SphereTM Particles 100μ L, water (180-x) μ l of nuclease free, the library x* μ l after dilution, 2400 μ l of total volume.Library applied sample amount is fixed according to qRT-PCR Amount result is calculated, and is adjusted in the total applied sample amount of 700~750pmol.2. selecting Proton:Ion PITMHi-QTMOT2 200Kit program runs Water-In-Oil PCR reaction;3. removing the Recovery Tube after Water-In-Oil PCR reaction, upper layer is discarded Microballon is resuspended in Recovery solution, prepares Melt-off solution, and system is as follows: 280 μ l, 1M NaOH of Tween solution, 40 μ l, 320 μ l of total volume.
(3) it enrichment with magnetic bead: is vortexedMyOneTM130 μ L-Ion are added in Streptavidin C1Beads PITMMyOneTMBeads Capture Solution is enriched with.
(4) corresponding dedicated 8 connecting leg of agent transfer ES 1. One touch and ES: is subjected to ES reaction, 8 platoon holes number It is as follows that 1-8 corresponds to reagent sequence: the positive ISP template of 100 μ l, 130 μ l-MyOneTMBeads eluent, 300 μ l Ion PITMES Wash Solution, 300 μ l Ion PITMES Wash Solution, 300 μ l Ion PITMES Wash Solution, empty, 300 μ l-Melt-off solution are empty.2. 15500g is centrifuged the ISP 5min after ES, abandons supernatant and only stay 10 μ l weight Outstanding magnetic bead;Cleaning, 15500g are centrifuged 5min, abandon supernatant and leave and take 10 μ l resuspension magnetic bead, moisturizing to 100 μ l, pressure-vaccum mixes 10 times.
4. sequencing reaction: referring to high-flux sequence instrument Ion Torrent operation instructions, the specific steps are as follows: (1) make Standby sequencing sample: 1. vortex Ion PITMControl Ion SphereTMParticles 5s is centrifuged 2s, after adding 4 μ l to ES Soft to be vortexed in re-suspension liquid, 15500g is centrifuged 3min;2. discarding supernatant, 10 μ l are stayed, 15 μ l-Ion PITM are then added Annealing Buffer adds 20 μ l Sequencing Primer, soft to be vortexed, and is centrifuged 2s;Sequencing primer annealing is anti- It answers: 95 DEG C, 2min;37 DEG C, 2min;25 DEG C of maintenances;3. be centrifuged PCR pipe, be added 10 μ l Loading Buffer, mix and from The heart, totally 55 μ l;(2) washing of Ion-Proton sequenator, chlorine are washed and are initialized;(3) Loading chip;(4) machine is sequenced on.
5. bioinformatic analysis: using Ion Report software (v4.6, Thermo Fisher, Carlsbad, CA, USA) filter low-quality sequencing fragment, and by qualified sequencing fragment compare to the mankind with reference to genome hg19 (http: // Hgdownload.cse.ucsc.edu/downloads.html), using Torrent Variant Caller (v4.6.0.7) Subprogram detects mutational site, and software parameter uses the setting of default.This software has been optimized for processing Ion The distinctive type of error of Torrent microarray dataset.To the mutation found out include SNP and Indel using ANNOVAR (http: // Annovar.openbioinformatics.org/en/latest/) software is annotated, and notes content includes mutation in gene Position in group, associated gene, gene extron number, nucleotide level variation, corresponding protein level variation, and should Mutation is in dbSNP database (http://www.ncbi.nlm.nih.gov/snp/), thousand human genome databases 1000Genomes (http://www.1000genomes.org/), exon group integrated database ExAC (http: // ) and human mutation database HGMD (http://www.hgmd.cf.ac.uk/ exac.broadinstitute.org/ Ac/index.php the annotation in), PolyPhen (http://genetics.bwh.harvard.edu/pph2/) and SIFT (http://sift.jcvi.org/) function prediction result etc..
Further use following principle screening pathogenic mutation site: (1) according to genomic locations and type mutation where, Filter out the mutation not having an impact to protein product sequence;(2) 1000Genomes, ExAC03 and ESP6500 crowd are utilized Database annotates ratio of each mutation in crowd, is not considered as polymorphic site if ratio is less than or equal to 1%;(3) Human mutation database is retrieved, inquires whether a mutation has in HGMD database, ClinVar database and document It records, whether appears in the related diseases such as primary HLH;(4) protein function forecasting software PolyPhen-2 is utilized, SIFT and MutationTaster predicts whether the mutation influences protein function.
Its result judgement is broadly divided into following two situation: (1) being predicted as causing a disease or doubtful pathogenic site mutation detects Result include: 1. HGMD database clearly report harmful site relevant to the disease and meet 1000Genomes, At least two data-base recording of ExAC03 and ESP6500 demographic data library is not record less than or equal to 1% or;②ClinVar Database clearly reports relevant to the disease harmful or harmful site and may meet 1000Genomes, ExAC03 and At least two data-base recording of ESP6500 demographic data library is not record less than or equal to 1% or;It is clearly recorded 3. having in document Site, and notice that the unknown site mutation detection of (refer to above-mentioned table 1) (2) clinical meaning related to disease to be detected is tied Fruit: to clinical diagnosis or suspect the relevant gene mutation of diagnosis and meet protein function forecasting software PolyPhen-2, SIFT and MutationTaster predict the mutation at least two influence protein function and/or 1000Genomes, ExAC03 and At least two data-base recording of ESP6500 demographic data library be do not record less than or equal to 1% or, but the mutation it is pathogenic simultaneously It is indefinite.
6. statistical analysis: counting the ratio that each gene carries pathogenic mutation, filter out the highest gene of mutation rate, use Software be Excel.
7. medicine is interpreted: making molecular disease to the genic mutation type that bioinformatic analysis obtains with medicine unscrambling data library Reason diagnosis.Medicine unscrambling data library used is as follows:
(1) PRF1 gene pure known to or compound heterozygous mutations and familial Hemophagocytic Lymphohistiocytosis 2 types (FHL-2) are related.Familial Hemophagocytic Lymphohistiocytosis (FHL) is infant or children's early stage The recessive hereditary disease of the immune disorder of morbidity, accidental teenager and adult patients.Clinical manifestation is mainly height The multiple organ damages such as heat, hepatosplenomegaly, enlargement of lymph nodes, whole blood trace elements, blood coagulation disorders and central nervous system involvement, group Knitting and learning feature is histocyte/macrophage hyperplasia and activation, and companion bites blood phenomenon.FHL-2 is by perforin gene PRF1 mutation, perforin protein expression are abnormal, and are the current most common pathogenesis.
(2) UNC13D gene pure known to or compound heterozygous mutations and familial Hemophagocytic lymphocyte hyperplasia 3 type of disease (FHL-3) is related.Familial Hemophagocytic Lymphohistiocytosis (FHL) be infant or children early stage i.e. The recessive hereditary disease for the immune disorder that can be fallen ill, accidental teenager and adult patients.Clinical manifestation is mainly The multiple organ damages such as high fever, hepatosplenomegaly, enlargement of lymph nodes, whole blood trace elements, blood coagulation disorders and central nervous system involvement, Histologic characteristics are histocyte/macrophage hyperplasia and activation, and companion bites blood phenomenon.FHL-3 is due to Munc23-4 Protein coding gene UNC13D mutation, Munc23-4 albumen play a decisive role during cell toxicant particle goes out born of the same parents.
(3) STX11 gene pure known to or compound heterozygous mutations and familial Hemophagocytic lymphocyte hyperplasia 4 type of disease (FHL-4) is related.Familial Hemophagocytic Lymphohistiocytosis (FHL) be infant or children early stage i.e. The recessive hereditary disease for the immune disorder that can be fallen ill, accidental teenager and adult patients.Clinical manifestation is mainly The multiple organ damages such as high fever, hepatosplenomegaly, enlargement of lymph nodes, whole blood trace elements, blood coagulation disorders and central nervous system involvement, Histologic characteristics are histocyte/macrophage hyperplasia and activation, and companion bites blood phenomenon.FHL-4 is due to STX11 gene Mutation, STX11 gene encode synaptotagmin, play an important role in function operation in the cell.
(4) STXBP2 gene pure known to or compound heterozygous mutations and familial Hemophagocytic lymphocyte hyperplasia 5 type of disease (FHL-5) is related.Familial Hemophagocytic Lymphohistiocytosis (FHL) be infant or children early stage i.e. The recessive hereditary disease for the immune disorder that can be fallen ill, accidental teenager and adult patients.Clinical manifestation is mainly The multiple organ damages such as high fever, hepatosplenomegaly, enlargement of lymph nodes, whole blood trace elements, blood coagulation disorders and central nervous system involvement, Histologic characteristics are histocyte/macrophage hyperplasia and activation, and companion bites blood phenomenon.FHL-5 is due to STXBP2 base Because mutating, STXBP2 gene encodes Muncl8-2 protein function, is adjusting the process lifting of vesicle transport to target cell membrane It acts on.
(5) SH2D1A gene mutation known to is related with 1 type (XLP-1) of X linksystem lymphoproliferative syndrome.XLP suffers from Person often falls ill because infecting EBV, and main clinical manifestation has lethal infectious mononucleosis (fatal infectious Mononucleosis, FIM), B cell lymphoma, dysgammaglobulinemia, wherein FIM accounts for 50%, and B cell lymphoma accounts for 20%, dysgammaglobulinemia accounts for 30%, and alpastic anemia, vasculitis, Pulmonary lymphomatoid granulomatosiss etc. are rare XLP clinical manifestation.XLP-1 by coding lymph signal anakmetomeres GAP-associated protein GAP (SLAM-associated protein, SAP caused by SH2D1A gene mutation).
(6) XIAP gene mutation known to is related with 2 type (XLP-2) of X linksystem lymphoproliferative syndrome.XLP patient It often falls ill because infecting EBV, main clinical manifestation has lethal infectious mononucleosis (fatal infectious Mononucleosis, FIM), B cell lymphoma, dysgammaglobulinemia, wherein FIM accounts for 50%, and B cell lymphoma accounts for 20%, dysgammaglobulinemia accounts for 30%, and alpastic anemia, vasculitis, Pulmonary lymphomatoid granulomatosiss etc. are rare XLP clinical manifestation.XLP-2 is caused by the chain XIAP gene mutation for inhibiting albumen of coding X, and inflammation can also occur in patient Disease property enteropathy.
(7) ITK gene pure known to or compound heterozygous mutations are related with Epstein-Barr virus associated lymphoid hyperplasia syndrome. Epstein-Barr virus associated lymphoid hyperplasia syndrome is normal caused by encoding the ITK gene mutation of IL2 induced T lymphocyte kinases Autosomal recessive primary immunodeficiency syndrome.It is mainly shown as that early stage children's Epstein-Barr virus related immune is lacked of proper care, shows as lymph Tumor, lymphomatoid granulomatosis, phage-displayed peptide lymphohistocysis disease and hypogammag lobulinemia.Patient may also send out Raw autoimmune disease, such as autoimmune hemolytic anemia or kidney trouble etc..
(8) CD27 gene pure known to or compound heterozygous mutations are related with Lymphocytosis II type.Lymphocyte increases Raw disease II type is the autosomal recessive immunologic deficiency disease as caused by CD27 gene mutation, is mainly shown as duration EBV virus Mass formed by blood stasis, hypogammag lobulinemia, phage-displayed peptide lymphohistocysis disease and lymthoma.
(9) MAGT1 gene mutation known to lacks with the chain immune deficiency of X with magnesium to be had with ebv infection and tumour It closes.The chain immune deficiency of X lacks companion's ebv infection with magnesium and tumour is the MAGT1 base due to encoding magnesium transport protein 1 Because of X-linkage recessive disease caused by mutating.It is mainly shown as light-duty combined immunodeficiency, Epstein-Barr virus Load increases, the relevant lymphadenia of Epstein-Barr virus, and is often accompanied by splenomegaly, dysgammaglobulinemia and CD4/ Cd8 cell ratio is inverted.
(10) RAB27A gene pure known to or compound heterozygous mutations are related with 2 type of Griscelli syndrome. 2 type of Griscelli syndrome is the autosomal recessive inheritance as caused by the RAB27A gene mutation of one Small GTPases of coding Property disease.It is mainly shown as the pyogenic infection of skin and internal organs repeatedly;Pigment slightly declines, and is mainly shown as hair Change in silver gray;Nervous system is most common to show as epilepsy and parmlysis of cranial nerve, other performance include physiological reflex it is hyperfunction, Muscle tensility is hyperfunction, intracranial hypertension, growth and development retroversion, nystagmus, incoordination etc..2 type of Griscelli syndrome develops For the median age of HLH about at 3.5 years old, the performance of part infant nervous system can be used as its primary performance that HLH occurs.
(11) LYST gene pure known to or compound heterozygous mutations are related with Chediak-Higashi syndrome. Chediak-Higashi syndrome (CHS) is a kind of due to the caused often dye of lysosome transport associated regulatory genes LYST mutation Colour solid recessive inheritance primary immunodeficiency disease.Typical diagnostic characteristic is that occur widened lysosome and cytoplasm into the cell Grain.It is mainly presented with caused by immune deficiency bacterium infection repeatedly, often involves respiratory tract, skin etc.;In hair, skin, eyes Equal positions can have different degrees of hypopigmentation;Nervous system lesion, which is then mainly seen in, grows up into children are more rare, predominantly all Enclose neuropathy;Part infant can have slight hemorrhagic tendency;About 85% infant can enter accelerated period, show as HLH.
(12) AP3B1 gene pure known to or compound heterozygous mutations are related with Hermansky-pudlak syndrome 2. Hermansky-pudlak syndrome (HPS) is one of Tietze syndrome, clinically with eye skin albinism symptom, go out Waxy lipid accumulation triad is main feature in blood tendency and tissue.HPS2 type is coded product combination albumen composition 3 AP3B1 gene mutation caused by recessive hereditary disease.It is mainly shown as congenital Neutrophilic granulocytopenia, instead Multiple infection, frequently results in pulmonary fibrosis;Eye pigment decline;Hematostaxis or prolonged bleeding time;In addition more rare can There is inflammatory bowel disease, slight facial deformity (extends, nostril is leaned forward) in people, developmental lag, slight amentia etc., at present There are some patientss that HLH can occur, is to be mainly shown as hepatosplenomegaly, whole blood trace elements, height due to caused by after virus infection Triglyceride mass formed by blood stasis etc. is different from other kinds of main feature.This disease is easily diagnosed as Chediak-Higashi at the beginning Syndrome, the latter by low pigment, cycles of infection and into the cell there is huge particle characterized by, but in HPS2 type Patient cells There is no huge particulate matters.
(13) BLOC1S6 gene pure known to or compound heterozygous mutations are related with Hermansky-pudlak syndrome 9. Hermansky-pudlak syndrome is one of Tietze syndrome, is clinically inclined with eye skin albinism symptom, bleeding To with lipid accumulation triad waxy in tissue be main feature.HPS9 type is the BLOC1S6 gene due to encoding pale albumen Recessive hereditary disease caused by being mutated, Case report is less at present, and main clinical manifestation has thrombopenia And leukopenia, eye, skin albinism, nystagmus and skin infection repeatedly.Laboratory, which checks, can find NK cell Activation is abnormal.
(14) TCN2 gene pure known to or compound heterozygous mutations and vitamin B12 deficiency disease/TC II deficiency disease/cobalt amine Plain transport protein II Defect is related.TC II deficiency disease (Transcobalamin II deficiency) is a kind of due to compiling Autosomal recessive disease caused by the TCN2 gene mutation of code transcobalamin II is characterized in that infant period is developed Bad, macrocytic anemia and pancytopenia.Other features include methylmalonic aciduria, recurrent infection, vomiting And diarrhea.In addition there is only a few TC II deficiency disease patient that HLH occurs.Vitamin B12 treatment can improve clinical symptoms.
(15) IL2RG gene mutation is related with Reconstruction in Sever Combined Immunodeciency/moderate known to.Severe combined immunodeficiency It (SCID) is one group of heterologous disease, feature is that T and B cell developmental disorder, lymphocyte number are extremely reduced and body fluid and thin Born of the same parents' immune deficiency.The mutation of the IL2RG gene of -2 receptor y subunit of encoding Interleukin can lead to autosomal recessive.Patient Serious combined immunodeficiency can occur for infant period, there are lymphopenia, be easy to happen virus and fungi and Bacterium infection, lacks delayed type hypersensitivity, DTH, atrophy of thymus gland, and HLH occurs for only a few SCID patient.Other part IL2RG gene The patient of mutation can behave as the immune deficiency of moderate.
It is as shown in table 1 to the selection result of Chinese population primary HLH mutated gene group, primary HLH mutated gene group Including PRF1, UNC13D, STX11, STXBP2, SH2D1A, XIAP, ITK, CD27, MAGT1, RAB27A, LYST, AP3B1, The set of BLOC1S6, TCN2 and IL2RG mutated gene of totally 15 genes, exon region carry 411 mutation positions altogether Point can be used for detecting primary HLH.
Primer needed for embodiment 2 synthesizes detection kit
Design of primers: being directed to mutational site of the present invention, multiple needed for being expanded using Primer6.0 software design PCR primer, primer sequence are as shown in table 2.
Primer synthesis: designed primer is sent to Synesis Company and is synthesized.
Embodiment 3 detects clinic HLH patient's sample using kit described in embodiment 2
(1) peripheral blood for collecting 3mL patient described in embodiment 1 (is purchased from Tiangeng biochemistry section using DNA extraction kit Skill Co., Ltd, article No.: DP318-03) genomic DNA is extracted, mutated gene sequence in mutated gene group of the present invention will be included The genomic DNA stock solution of column will be derived from the confirmed genome not comprising mutant gene sequence of Healthy People as positive control DNA sequence dna storing liquid is as negative control;
(2) multiple PCR primer in the kit described in embodiment 2 expands genomic DNA, PCR amplification it is anti- It answers system and response procedures is conventional method in that art;
(3) the resulting segment of amplification in step (2) is surveyed using two generations sequencing Ion amplicon with the method in embodiment 1 Sequence library construction Kit 2.0-LV96 (is purchased from Thermo Fisher company, article No.: 4475345) is made for Ion The library of Torrent microarray dataset sequencing.
(4) with the method in embodiment 1 to gained DNA library in step (3) after Water-In-Oil is handled in Ion High-flux sequence is carried out on Torrent platform, obtains lower machine data;
(5) bioinformatic analysis is carried out to the lower machine data in (4), is then interpreted using medicine unscrambling data library Make diagnosis.The positive rate of 15 genes detected by 41 patients is as shown in table 4 below.
4 primary HLH related gene positive rate of table:
After counting the result shows that: in 41 HLH patients, 19 patients are diagnosed as sHLH, and 22 patients are diagnosed as pHLH.Gene mutation is not detected in sHLH, there are 11 patients to detect gene mutation in pHLH, wherein PRF1 gene mutation There are 4, UNC13D and STXBP2 gene mutation each 2, STX11, XIAP and ITK gene mutation each 1.It can be seen that using The method that the detection kit was sequenced using two generations can carry out auxiliary diagnosis to pHLH patient, can effectively with the area sHLH Point, have the characteristics that diagnosis quickly, accurately, contained much information.
The foregoing is merely illustrative of the preferred embodiments of the present invention, is not intended to limit the invention, all in essence of the invention Within mind and principle, any modification, equivalent replacement, improvement and so on be should all be included in the protection scope of the present invention.
SEQUENCE LISTING
<110>coordinate magnificent medical diagnostic techniqu Co., Ltd for Tianjin
The biomarker of<120>one groups of detection primary Hemophagocytic Lymphohistiocytosis and its detection examination Agent box
<130> 2019.07.29
<160> 1136
<170> PatentIn version 3.5
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acacacacac aaaagctgtt gaaag 25
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gtttcaacca agctacaaac attacctaaa 30
<210> 3
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ctttatcaat gtgttttgaa aagcaggact 30
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<400> 4
aagagacaca tgaacacatt agtaccata 29
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<400> 5
tgcctgaaag attacatttg ttcaaacat 29
<210> 6
<211> 27
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<213> Rabbit calicivirus
<400> 6
atgtgtagga atggattttg aggttgt 27
<210> 7
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<400> 7
tatgatcact gcttgtccat ttttcca 27
<210> 8
<211> 30
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<400> 8
ctgcagttat ttaacattgc ccatgatatt 30
<210> 9
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<400> 9
ctgcagttat ttaacattgc ccatgatatt 30
<210> 10
<211> 28
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<400> 10
tgagaagaat tgagcatgga ttttggta 28
<210> 11
<211> 27
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<400> 11
cctgctgaat attatggatt aggcctt 27
<210> 12
<211> 28
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<400> 12
tttgccagaa ctctaaatct ctgaatga 28
<210> 13
<211> 24
<212> DNA
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<400> 13
ccaatctaat accacgaggc tcat 24
<210> 14
<211> 29
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<400> 14
caacctgcac aacatggtga aattattaa 29
<210> 15
<211> 30
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<213> Rabbit calicivirus
<400> 15
tatgctctgt atatctttca ggaaagacca 30
<210> 16
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 16
gccaggataa tatacacagg taggttc 27
<210> 17
<211> 33
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<213> Rabbit calicivirus
<400> 17
atttacctat tggattaaaa acatgcattt tca 33
<210> 18
<211> 19
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<213> Rabbit calicivirus
<400> 18
ctcacgtgct gcttcatcg 19
<210> 19
<211> 25
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<213> Rabbit calicivirus
<400> 19
gtggaagact gttcaacact tacct 25
<210> 20
<211> 25
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<400> 20
gcctgagtaa gacctttgat gtagg 25
<210> 21
<211> 23
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<213> Rabbit calicivirus
<400> 21
agcatttctg cagagttggg tta 23
<210> 22
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 22
gggagaagga aaatgaaaaa tctaaaactt 30
<210> 23
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 23
gatgaatgag tagaaagcat gctgttc 27
<210> 24
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 24
ccgtacaaga tttattaggc agcttattgt 30
<210> 25
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 25
atgttcaagt tcaaaatgaa agctaagca 29
<210> 26
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 26
gagtcaggcc tagaaaacaa aagaac 26
<210> 27
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 27
tcaagtatgc caggaatata gacaaacatc 30
<210> 28
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 28
cttttacctg tggccatgtc aga 23
<210> 29
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 29
tgctctgaag caaaggcttt gta 23
<210> 30
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 30
atgcagattg ctcaaggtct aaagtaat 28
<210> 31
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 31
tgttcatgtg ataatgaagt gatatgctga 30
<210> 32
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 32
aagaaaacaa agcaagatag aactcctct 29
<210> 33
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 33
cttactagac tagaatgtca tctgtttgca 30
<210> 34
<211> 30
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<213> Rabbit calicivirus
<400> 34
tgaagatgat ctggtaaaac tgcagatatt 30
<210> 35
<211> 30
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<213> Rabbit calicivirus
<400> 35
gaacccagaa tatgcatatt tatgtgcatt 30
<210> 36
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 36
gccactattc agactatagg cagatg 26
<210> 37
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 37
taaaaggtct tagctaaatt gggcttgt 28
<210> 38
<211> 25
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<213> Rabbit calicivirus
<400> 38
tttctccaag tttgatggct gatct 25
<210> 39
<211> 28
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<400> 39
aatttcttag ttgtcagtct tgtcccaa 28
<210> 40
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<400> 40
cttggcaaat gaagccaaca tatca 25
<210> 41
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<213> Rabbit calicivirus
<400> 41
cctgcatagg gtctctatag cca 23
<210> 42
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 42
gaagcttctg ctgacttatc accat 25
<210> 43
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 43
cttgcagaga ctatgctttt gtatttgg 28
<210> 44
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 44
ggaaatcttc ttccctacag cagtaag 27
<210> 45
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 45
cgcaacccaa acctttctcc t 21
<210> 46
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 46
cgtacgagaa ctagttttgt tccgt 25
<210> 47
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 47
tgctctttgg ttagcaaagc aaaaa 25
<210> 48
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 48
tgagaaaact gtgattggct ctgtt 25
<210> 49
<211> 28
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<213> Rabbit calicivirus
<400> 49
agtgtcttga tcatagttgg atcagttg 28
<210> 50
<211> 29
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<213> Rabbit calicivirus
<400> 50
gtagtgctta ctcaaagatg tttcattgg 29
<210> 51
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<213> Rabbit calicivirus
<400> 51
gttctttaaa aatagtcctg tgtgccatt 29
<210> 52
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<213> Rabbit calicivirus
<400> 52
gtgagcatca tgtaaagcta gaattaaagg 30
<210> 53
<211> 26
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<213> Rabbit calicivirus
<400> 53
gatgactgaa gaggaagttg acaagt 26
<210> 54
<211> 29
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<400> 54
aactgccatg acttgataat aagttgact 29
<210> 55
<211> 27
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<213> Rabbit calicivirus
<400> 55
tagcactgta cacaaacctg aaattct 27
<210> 56
<211> 30
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<213> Rabbit calicivirus
<400> 56
cggctgacaa tgtgattttt aaaagtagaa 30
<210> 57
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<213> Rabbit calicivirus
<400> 57
gctatcctag agtcttccac tgctt 25
<210> 58
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<400> 58
ttgagctctg attatgattg ttctctgtt 29
<210> 59
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<400> 59
acataaaaag tgtacggtcc catgaa 26
<210> 60
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<400> 60
cggttaatta cgtagcttat ttgttgacct 30
<210> 61
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<400> 61
catattcaag tcatcttcac ctccacat 28
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<400> 62
ggccatgagc ttaaaattct gtaaatgtaa 30
<210> 63
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<400> 63
cacgtgtcag tgacttccaa ga 22
<210> 64
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<400> 64
ggagttttgg ttaactcaat aataccagtg 30
<210> 65
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<400> 65
tcacagtgat actgtccagg agtt 24
<210> 66
<211> 30
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<400> 66
tatgctttca catagtcttt taaggcttgt 30
<210> 67
<211> 29
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<400> 67
tggtattact attactggga cctgattca 29
<210> 68
<211> 27
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<400> 68
aaaaacttcc tataggcatg aaaatgc 27
<210> 69
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<400> 69
aaagaaataa tgggcagcta gtcctt 26
<210> 70
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<400> 70
ggcatttact tctttgtatc atttctgact 30
<210> 71
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<400> 71
cttgcattta tattggttgc ctgctt 26
<210> 72
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<400> 72
tatgctcgga cacagtttgt cag 23
<210> 73
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<400> 73
gaactgtctt ctattgaact agattcgtca 30
<210> 74
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<400> 74
acaggataga attgaatttg aatgggttct 30
<210> 75
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<400> 75
tttggcatat ttacttaaag ctccactct 29
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<400> 76
ggaacaacat ttgtttgaca taaccattca 30
<210> 77
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<400> 77
gttacctttt tcctttggct tttgagt 27
<210> 78
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<400> 78
ggtgtccgtg tgtctaatta aatgactata 30
<210> 79
<211> 26
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<400> 79
tagacatctc tcaccttgct ctttct 26
<210> 80
<211> 30
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<400> 80
gcataggctt tcattgcatt gatttaacta 30
<210> 81
<211> 29
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<400> 81
ctatagctta cattccacac tgtacttcc 29
<210> 82
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<400> 82
ccgtatacta tggatccaga tcatagactc 30
<210> 83
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<400> 83
acctgtttgg agttggttaa atacaatttt g 31
<210> 84
<211> 33
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<400> 84
agctgtaaaa cttttgtaat agttaaaacc ttt 33
<210> 85
<211> 24
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<400> 85
tttttgtatt gcatgggctg catt 24
<210> 86
<211> 30
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<400> 86
gcacctatta actgtgtctg aaagatatgt 30
<210> 87
<211> 30
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<213> Rabbit calicivirus
<400> 87
ctgcataatg taacactcaa aatacttgct 30
<210> 88
<211> 28
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<400> 88
agcttggtat gtgaaaatga gatcacat 28
<210> 89
<211> 27
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<400> 89
ctgagaggcc atttagacta tctcttt 27
<210> 90
<211> 30
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<400> 90
gaatgctagt gtgtatctat catgtatgca 30
<210> 91
<211> 27
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<400> 91
accaagtggt ttccttttca ctaaagt 27
<210> 92
<211> 22
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<400> 92
ggcctcttta gcagcgattt ga 22
<210> 93
<211> 22
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<400> 93
gggttctctc caaaaggttc ca 22
<210> 94
<211> 21
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<400> 94
ccgctcagct acctctaaag c 21
<210> 95
<211> 30
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<400> 95
acaatcatcc agatctagaa gtgaaacatc 30
<210> 96
<211> 29
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<400> 96
ccacagattt ttaaaacaga acgtgtgat 29
<210> 97
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<400> 97
ctgagacagg acaggcttca gt 22
<210> 98
<211> 30
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<400> 98
cctgcagcaa attatttcat ttgacaaaaa 30
<210> 99
<211> 23
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<400> 99
tccttttaat ggaccggcac ttt 23
<210> 100
<211> 30
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<400> 100
attgcttagc taagtcttag ctattgctaa 30
<210> 101
<211> 25
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<400> 101
caggtttaag tgacacttct ccaga 25
<210> 102
<211> 27
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<400> 102
ttttgatctc tgcagatctg gcaaata 27
<210> 103
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<400> 103
cttattccgg tattactgtg tctccat 27
<210> 104
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<400> 104
accagaaagg caagtcattt cataaaataa 30
<210> 105
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<400> 105
ccctggaaaa gaggtaaacc ttttg 25
<210> 106
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<400> 106
cccagtccac aaaccaaatt atttttaatg 30
<210> 107
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<400> 107
actaaccata tactctttct gcttcttagc 30
<210> 108
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<400> 108
cggcgtccca aagcgtt 17
<210> 109
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<400> 109
agcgtgatac ctttagtgtt ttctagaatt 30
<210> 110
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<400> 110
ttccatctta ccagaaatgt attgtggatt 30
<210> 111
<211> 27
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<400> 111
gagggctaag aactggtttg tttaaag 27
<210> 112
<211> 30
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<400> 112
cgctgtacta cctttgtcag atatcatatt 30
<210> 113
<211> 24
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<213> Rabbit calicivirus
<400> 113
cgtttctgag tcatttggga ccaa 24
<210> 114
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<400> 114
ccaggttata atgctatgca gccta 25
<210> 115
<211> 30
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<400> 115
gatgtcacga gtcactagta tagactatct 30
<210> 116
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<400> 116
tgtgccttgt catttgttca ataaatttga 30
<210> 117
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<400> 117
tgtaaaccag aagtactgtt attttggtga 30
<210> 118
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<400> 118
ttcagtggtg cgatcagaat tca 23
<210> 119
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<400> 119
gacaacgctc ttccggtctt 20
<210> 120
<211> 21
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<400> 120
gccggacaga agagattgtc g 21
<210> 121
<211> 26
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<400> 121
tgtttcaggt tttgcaacat tttgga 26
<210> 122
<211> 24
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<400> 122
gttttaggca cgtacagtca actg 24
<210> 123
<211> 30
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<400> 123
ttttctgcaa aatagtgaat tggtacttgg 30
<210> 124
<211> 30
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<400> 124
cagacgaatg tatgagggtg tataattgtt 30
<210> 125
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 125
gccattctga gtttatgtgt tgactc 26
<210> 126
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 126
gcaggaatag ggatgaagta atatcacc 28
<210> 127
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 127
aattacctca aagcagagca ctgt 24
<210> 128
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 128
cacaactttt cacatccttt tggct 25
<210> 129
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 129
ttctgacgag ccacacgttt 20
<210> 130
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 130
ccgccaaaaa ccgcttactc 20
<210> 131
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 131
gtgaagataa ggctgtaaaa attttgacca 30
<210> 132
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 132
aagaatgtga aagaattttc aactcacttt 30
<210> 133
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 133
cccaacctcc ttttattagc tgtgt 25
<210> 134
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 134
tgctttgtct tctatagtca agtcctcta 29
<210> 135
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 135
gtggagcaac tggcagaagg at 22
<210> 136
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 136
tcctctattc ccatctgcta tcaataaaga 30
<210> 137
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 137
gggccagacg acgatatcag 20
<210> 138
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 138
aaacgtgtgg ctcgtcagaa 20
<210> 139
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 139
ctggaaagtg gtttgattat tgtgagtc 28
<210> 140
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 140
accaaaaagc tatagagctt ctgatgaa 28
<210> 141
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 141
aaaaatttct tgaagtggaa tgatgtacac 30
<210> 142
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 142
acctcgtatt tccctcaaac aataaattct 30
<210> 143
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 143
acagagcctg tgaagatgta tgaatg 26
<210> 144
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 144
atcattcatt aaagaaggca aatgctcttt 30
<210> 145
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 145
cagacaatgt cacctaaatt gctgaat 27
<210> 146
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 146
tgtgcaggaa ccagcatttt aaac 24
<210> 147
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 147
ccacaggctt agtggtacgt tg 22
<210> 148
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 148
tgggtagctt ttaaagtatt tcatcgctta 30
<210> 149
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 149
gttagctaat tgaacttttg tgacctgt 28
<210> 150
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 150
ccatcacagt ctagtaaggt atgtttttgt 30
<210> 151
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 151
cgtatcttac tgactaaact ggaatggaa 29
<210> 152
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 152
cccaaaaact caatgaggac acaatctata 30
<210> 153
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 153
tgagtgagta gaactccgga gaa 23
<210> 154
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 154
ccactgccgt atgacaaata acca 24
<210> 155
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 155
ctcgcagaga cctaggcat 19
<210> 156
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 156
gaggacggtg gtcggttt 18
<210> 157
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 157
agaaggagtt tgaaagagaa aagcagtta 29
<210> 158
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 158
gcaacatgac gtctgctact tg 22
<210> 159
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 159
caaaaataag gaacttgttg ctacctttct 30
<210> 160
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 160
ctttgaaccc aaaagccaca gaagca 26
<210> 161
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 161
gctgtactta cccttcttgt gatgata 27
<210> 162
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 162
aaggagaaac aaaaagttta tgtaggccta 30
<210> 163
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 163
ccagatgtgt gagccaggta ag 22
<210> 164
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 164
cggtatgcaa ggatcacact ga 22
<210> 165
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 165
ccctagataa ggtcagcctg tttc 24
<210> 166
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 166
ccctcgtgta tgcattctct ct 22
<210> 167
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 167
gaagcaagtg gaccttgaag gt 22
<210> 168
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 168
cacagagagt tgcctggaac tt 22
<210> 169
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 169
ccctcctatt acagcccaaa gat 23
<210> 170
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 170
ggtgggtttc agtgagattc cag 23
<210> 171
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 171
ccaagactca tcggatctcc ttct 24
<210> 172
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 172
ggttttcggt aatcctcctg gat 23
<210> 173
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 173
ctaaggaagg ctcatgtgtt gga 23
<210> 174
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 174
ttctgtgccc agttgctgat 20
<210> 175
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 175
gtgacagagt gccttttcga ga 22
<210> 176
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 176
ccaggaaact ggattttggg act 23
<210> 177
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 177
gtgaaggact gtgaccagca ta 22
<210> 178
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 178
cttgaagaag gccaaagctt tgg 23
<210> 179
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 179
tcagcccacc cacttacctt at 22
<210> 180
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 180
cagaaacagg ctgaccttat ctagg 25
<210> 181
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 181
gccagacaga aagctcctag gat 23
<210> 182
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 182
tcacaaggat gcgaataaaa tcgga 25
<210> 183
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 183
cacgcctgga atctcactga aa 22
<210> 184
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 184
gctccacagg actttctcct ttg 23
<210> 185
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 185
gcagagcctt gtcattacag ct 22
<210> 186
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 186
tctgtcacgt gtacacagga aag 23
<210> 187
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 187
ccagcttgga ggtgctaact c 21
<210> 188
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 188
ctcttacctg gctcacacat ctg 23
<210> 189
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 189
tctctgatcc aacccacctc tt 22
<210> 190
<211> 48
<212> DNA
<213> Rabbit calicivirus
<400> 190
tctctgatcc aacccacctc ttcctccttc tgaccatcat ttctcttt 48
<210> 191
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 191
gggatgtgaa tggtaatgat ggct 24
<210> 192
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 192
ccctctgtaa agccctggtt tataa 25
<210> 193
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 193
cctaatacct cctcccttcc cat 23
<210> 194
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 194
aagaaatcac ttctggctgt cagtt 25
<210> 195
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 195
actctcagcc agtcccttag ac 22
<210> 196
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 196
tgcagacatc atgagtactc ctttg 25
<210> 197
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 197
cacgaaacgt gtagcgtttc tg 22
<210> 198
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 198
aggagtatgt tttaattctc ccttctctca 30
<210> 199
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 199
gtagatggaa agaggaaggg agggaaa 27
<210> 200
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 200
cccaatcctc tgacagaaga acc 23
<210> 201
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 201
ctctgctatt gtcagctacc gtt 23
<210> 202
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 202
caggagctgt tgtgaggatt aaaca 25
<210> 203
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 203
aaggaaagtt agtaccactt agggcta 27
<210> 204
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 204
ctgacctgga catatctgtc tttagg 26
<210> 205
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 205
caggcagttg gcagttgata ga 22
<210> 206
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 206
gacaactggg agaagggtga taaaaa 26
<210> 207
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 207
gtctggttga atcctttagc ccta 24
<210> 208
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 208
gcactacctt caggatcctg act 23
<210> 209
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 209
aaaaagtcag tttccagaac agtactct 28
<210> 210
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 210
ccttcctttt cgcaggattc ttc 23
<210> 211
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 211
cccttcccac tccacttttc aat 23
<210> 212
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 212
ctacacccag ggaatgaaga gcaag 25
<210> 213
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 213
aacaaatgtt tggtagaggt ggatct 26
<210> 214
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 214
caagagagag ggtagcaagt ctc 23
<210> 215
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 215
gtgacaggga agtggagcaa aag 23
<210> 216
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 216
tggattatag acataagttc tccttgccta 30
<210> 217
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 217
ataaaattgg tagcccttga tagactgac 29
<210> 218
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 218
tcaatgatta aaggccaaaa gcttttactt 30
<210> 219
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 219
aaaaagccaa tggatcttat ctagcagt 28
<210> 220
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 220
ccggctgtga ctgaagattt taac 24
<210> 221
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 221
gcactgcagt aaagcaaagg act 23
<210> 222
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 222
atccagaacg aacctgggaa ga 22
<210> 223
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 223
gctgtctgtg ggctttgtca tt 22
<210> 224
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 224
ggaggtcctc aaattgtata cgaca 25
<210> 225
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 225
aactttaaaa tgtcttatcg caaatgcca 29
<210> 226
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 226
tcctaactta aggaggattc cttaggac 28
<210> 227
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 227
cctccttctg tgggcaagaa ag 22
<210> 228
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 228
tcttgcactg tctaactttg ttgtctt 27
<210> 229
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 229
ctgcagatcc tgaatggagg aa 22
<210> 230
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 230
ccacatgtga caagaggcta ga 22
<210> 231
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 231
gaatctaaag tttatggttc cagggactt 29
<210> 232
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 232
agagaggtag cagcatactc tgt 23
<210> 233
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 233
ggtctcttct tttataccaa gctcatcttt 30
<210> 234
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 234
ggagtctcaa ccttaaaatt gctcaac 27
<210> 235
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 235
ctatatgcaa ggtgaatatg tactgagct 29
<210> 236
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 236
agctctagac tttctagttc catcact 27
<210> 237
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 237
aacggattgc agagggaata aatacaa 27
<210> 238
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 238
cttttaaagt tgctttgaag ctcgtctat 29
<210> 239
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 239
actggcttga gattcagatg ca 22
<210> 240
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 240
gcttgaaaaa ggtaatacca tgcaca 26
<210> 241
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 241
tagagaactc ccttatacag agttttggt 29
<210> 242
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 242
cctatgcacc atatttatta aaatgcagct 30
<210> 243
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 243
tcaagccatt agcaaaggct gt 22
<210> 244
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 244
catgatccag ttcttgaaag gtggt 25
<210> 245
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 245
aaccagcaga cttttgtgaa aatcac 26
<210> 246
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 246
tttcttcagg ttcccaaagt ggt 23
<210> 247
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 247
tcatttgttt aagtgagaac aatccctgt 29
<210> 248
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 248
aatctaatga cgctgatctg acagaag 27
<210> 249
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 249
attagacaaa atgaccattg gctattttgg 30
<210> 250
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 250
ctgggtgcgt agataatctg aca 23
<210> 251
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 251
tcattaatgc cactctcctt ctttcc 26
<210> 252
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 252
caatctcttg cacaaaagtg agct 24
<210> 253
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 253
ggcccttttt ctcagaaaaa ccc 23
<210> 254
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 254
agccagggtt tgaaaactat ggg 23
<210> 255
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 255
gctcagtagg tctgctgtca gt 22
<210> 256
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 256
cacactctat tctattgtgg aacccaa 27
<210> 257
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 257
aagcactggt agaaatagaa aatgaccat 29
<210> 258
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 258
ccagacatga gacagtgcac tta 23
<210> 259
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 259
gtgaagtctc aggaatggga ct 22
<210> 260
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 260
gtctgcattt gataaaggaa acagct 26
<210> 261
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 261
gcctggtgtt tgagttcatg ga 22
<210> 262
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 262
agtgagaact gtccctttac cct 23
<210> 263
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 263
ccagaataaa attagctttt gcgtctga 28
<210> 264
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 264
ggtaggctca tggccagttt at 22
<210> 265
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 265
caacatggaa gcacatacaa aaatcca 27
<210> 266
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 266
gcagcttcta atgctctatg gaatg 25
<210> 267
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 267
gagccagaac aggagtgatg tc 22
<210> 268
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 268
ccatatcctg ggatactgtg ttgttg 26
<210> 269
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 269
ccggatattc tgagaagcag ctt 23
<210> 270
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 270
agaagaggag gcatagtcac ct 22
<210> 271
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 271
ttggcgagca attgaaactt gtt 23
<210> 272
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 272
cagggtgaac agagattttg cag 23
<210> 273
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 273
tgtaactgag gctttaaaaa gccaaga 27
<210> 274
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 274
gctagtggtt ctatactgac ttctttactg 30
<210> 275
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 275
acaaccaacc agtcatgttg ct 22
<210> 276
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 276
cttgaggctc tccacttcac aataattata 30
<210> 277
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 277
aattgactga tctctgtggt ttggttta 28
<210> 278
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 278
tcaaaaggta caaaatgcaa aatctacgaa 30
<210> 279
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 279
gtctttgctt ggttttgttg tctct 25
<210> 280
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 280
caaatcatcc tggtatttta tttgttcgca 30
<210> 281
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 281
cagacacaac ctcagagtcc tttt 24
<210> 282
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 282
taggattgtc atttgtttcc ttgatgtga 29
<210> 283
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 283
tctcttccag ggaaatgggt gat 23
<210> 284
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 284
catttcaaga acactgaacc gatgttc 27
<210> 285
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 285
cctttggttg tgctaagagg tgat 24
<210> 286
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 286
agtccaaaca taaaatgcta tgcgaaaa 28
<210> 287
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 287
gtgtgttaag tggttggctt ttcat 25
<210> 288
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 288
acaaatatag agggcttttt agggagagt 29
<210> 289
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 289
ctgaatctga atcagaatca aacattcagg 30
<210> 290
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 290
tttggttcag tttaagacaa gacattagga 30
<210> 291
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 291
tctagttgtc tgtcaatcct agtacaagaa 30
<210> 292
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 292
agatgcagac atctagggag ctt 23
<210> 293
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 293
atgatgaggt tctaataaga tgctctgaac 30
<210> 294
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 294
ttcatagctt gcattttaaa cttgttgtca 30
<210> 295
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 295
atttaccttg gtgttatcaa atgccaac 28
<210> 296
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 296
ccatctgcca caaaaagatt ttctgtttta 30
<210> 297
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 297
cgtagtcagc aagtataaat gggaaca 27
<210> 298
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 298
tctttggaga aaagtgccaa taagactaaa 30
<210> 299
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 299
aaagtttatc caatttaatg gcatgctgt 29
<210> 300
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 300
atctagtctg ctttgcagaa atcttttact 30
<210> 301
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 301
taattagagc agcacagagg ccatt 25
<210> 302
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 302
atctcctcca gatttggaat tattgacaat 30
<210> 303
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 303
ccacacccag ccgagaatta atata 25
<210> 304
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 304
gatgatccaa gtgtgggctg at 22
<210> 305
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 305
gctgttgtat attcatgaaa gagtgaaggt 30
<210> 306
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 306
ggtaatagtg gcttcttgac tcaacatat 29
<210> 307
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 307
aagtgccaca aaaatttgat gttcatagt 29
<210> 308
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 308
gctgcatatt tttcagtaag tatgtgct 28
<210> 309
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 309
atgctatgtt tgatttggag accttct 27
<210> 310
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 310
accatttgag tcactttggt tgttttattt 30
<210> 311
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 311
gcaagctcac ctgaatcaca ca 22
<210> 312
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 312
tgccttatgt acaataggta catagactga 30
<210> 313
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 313
aaagtgttta cctggtactg ttgtgaa 27
<210> 314
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 314
cagtcgagca gtgacaatct gat 23
<210> 315
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 315
ggaacataga tggatatttt agccaggtt 29
<210> 316
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 316
tttgcagttg gctggaaaat gg 22
<210> 317
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 317
aagtacatat tacatgcctc tgctttactc 30
<210> 318
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 318
gtttctgttg aacttcctga ttaaccaatt 30
<210> 319
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 319
taaacacaga ggttaaattg agcctgt 27
<210> 320
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 320
tgcacaagag agaaagcaaa tttttgaaat 30
<210> 321
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 321
gataagtcag gacctaccac cacta 25
<210> 322
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 322
tgtttccctg tggtttaatg tggag 25
<210> 323
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 323
cttctcaata aacccatggc cttact 26
<210> 324
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 324
ctgatatgtg tgggtatgtt tgtattttca 30
<210> 325
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 325
tgtgctgggt gtctcttgtt ag 22
<210> 326
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 326
ctagatggca agatctttca ggagaaa 27
<210> 327
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 327
gctggatgat gcaaaaatat gacca 25
<210> 328
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 328
gttaaccacc catcaccagc ta 22
<210> 329
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 329
ccttgttcct tgctatatgt catcagaag 29
<210> 330
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 330
tctacactta ccacctttta aaaagcca 28
<210> 331
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 331
tcatctgaca cttataaaat gtgtgtgtgt 30
<210> 332
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 332
tcaacagaag atggaattgg agttacc 27
<210> 333
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 333
gctgaaactt cttccacatt tatggaag 28
<210> 334
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 334
ttcagaagtc acaaagagga gcaaggaaaa 30
<210> 335
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 335
ctgaactcaa catgtagatc caacga 26
<210> 336
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 336
cggaagactg ttaaccaaga tgttcata 28
<210> 337
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 337
tcaatatctg gaactgaggc atctttc 27
<210> 338
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 338
gtatatccca catgcaatag cgatatatta 30
<210> 339
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 339
gcatatttac tgtacaagga gatttctcca 30
<210> 340
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 340
cttttggtga aattgctcat ttattcctct 30
<210> 341
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 341
ctcctctttg gagcacagga ttaaata 27
<210> 342
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 342
atgctgaact ctcctcaagt ttatcc 26
<210> 343
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 343
caatatatgc tgctgaaaat ttttcagtgc 30
<210> 344
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 344
caaaaaccca tttgaagaga ctgca 25
<210> 345
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 345
tgacagtgct cattattttc atcacact 28
<210> 346
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 346
gtcatagagc ccttctttta cctgag 26
<210> 347
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 347
tttttcctaa gattttctgg catcatctct 30
<210> 348
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 348
ctcctttagc agccagtgta gtg 23
<210> 349
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 349
ccctgtcttg gaataatctc tctgga 26
<210> 350
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 350
agacgacagc gtaaaattac ccatc 25
<210> 351
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 351
cttcatgagt tgagtcattt tggaaagg 28
<210> 352
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 352
gaacagtctt ctgttttcaa tccatttcag 30
<210> 353
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 353
ccacttgtag gtattcacct gaggta 26
<210> 354
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 354
gtatgctgga attaaatttg ctttctgcta 30
<210> 355
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 355
taagtggcat aatgaagacg tttcca 26
<210> 356
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 356
gaagccacag cactattgca ag 22
<210> 357
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 357
tgatctgctt tgaccactgg aaat 24
<210> 358
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 358
gggttgtagt atcgacaggt tacaaaatat 30
<210> 359
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 359
aagagaccaa tatccacatc tttcttgg 28
<210> 360
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 360
gtggacccaa ccatacatct gtaa 24
<210> 361
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 361
ccttttgctt atacccaaac accaa 25
<210> 362
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 362
cagctatttt tgtgaactct taagacctg 29
<210> 363
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 363
ggagcacttt gggcaaggaa ta 22
<210> 364
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 364
tatcactatg gctcccacta ttccaata 28
<210> 365
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 365
tcatttcaag ttcatcatca atgatagcct 30
<210> 366
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 366
gcacagcaga actgcttatg aa 22
<210> 367
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 367
ctagcatcga acacattcaa agtgg 25
<210> 368
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 368
ctagccaagc aactgaaacg gaact 25
<210> 369
<211> 31
<212> DNA
<213> Rabbit calicivirus
<400> 369
aaaaagacaa aagattccca attatagtgg a 31
<210> 370
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 370
gttgtatctt catcgaggaa ctcaagaatt 30
<210> 371
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 371
ctcccgcagc ttacctatca tg 22
<210> 372
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 372
tgttctgata aatacgttcc atgtatgctt 30
<210> 373
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 373
cttcactcca tgttcttaac cactca 26
<210> 374
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 374
gcagatagtg aaagcaatcc tgaaga 26
<210> 375
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 375
gttcagaggt acacagaaag gct 23
<210> 376
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 376
gcataatgct cttttacttc ttctccaaat 30
<210> 377
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 377
gagtttctaa gaagaaagag attgtgctca 30
<210> 378
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 378
cttgcttgtg atatacagca acttttca 28
<210> 379
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 379
aattaatgag agtataactc gcagtgctaa 30
<210> 380
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 380
agccttacat aggtagagta tgagcattaa 30
<210> 381
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 381
tactgtccat cccatcacat atcca 25
<210> 382
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 382
gattgaaaca caactagcaa agcctttatt 30
<210> 383
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 383
tgcttgtaaa tctgtttgtg taggct 26
<210> 384
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 384
cacgtttctg tttcaagaaa tgtttaccta 30
<210> 385
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 385
cagcgattac attgatagat actccct 27
<210> 386
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 386
caataaacaa atgagcttgc ccttca 26
<210> 387
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 387
tgcatagtgg agctaaagac agaac 25
<210> 388
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 388
tgcatgttgt agcaaacatt tctgtaaa 28
<210> 389
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 389
cactcttaac aagaccagtt attctgcata 30
<210> 390
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 390
ctattcacgt tgaagtgatt tgctttgt 28
<210> 391
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 391
catgtgtatg cagtttaagg ttaaagca 28
<210> 392
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 392
tttgaaaaca ctgtcagata agctcagta 29
<210> 393
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 393
acagacggct ccaagatgtt tag 23
<210> 394
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 394
gcatgggtat taagaacaca gcctaaata 29
<210> 395
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 395
aaacttcttg catactgaag gctt 24
<210> 396
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 396
ctttcttagc tcaaaggaga accagaat 28
<210> 397
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 397
cataaaatat ttggtacaga ggcacctact 30
<210> 398
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 398
tcccaccaag gtattccaaa gaaaatatt 29
<210> 399
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 399
agtgcatatt gacacaatct tccagat 27
<210> 400
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 400
aatgttctat tccttcctta gcagctatg 29
<210> 401
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 401
agtctgcccg taggttttta tcatg 25
<210> 402
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 402
gtgttgtttt tccctttggt attattgtca 30
<210> 403
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 403
ccaactgcca tgaggttgga ta 22
<210> 404
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 404
cagatcagtt gtgacttact tactcaatct 30
<210> 405
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 405
ccggttgaca tcggtcagaa at 22
<210> 406
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 406
gccaatcttc agttagaaac aaacaacaaa 30
<210> 407
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 407
tgagaaaagc actaaaagta aggagca 27
<210> 408
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 408
caccgcaaat catgactctg aaaa 24
<210> 409
<211> 17
<212> DNA
<213> Rabbit calicivirus
<400> 409
acccggaacc ttctgcc 17
<210> 410
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 410
gggtggtgtt ctcggtttc 19
<210> 411
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 411
caacaacatg gatgaatttc agagacatg 29
<210> 412
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 412
acaaaacaaa atccaaatat ttacacctgt gt 32
<210> 413
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 413
tcgaactcca ggcctcaagt a 21
<210> 414
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 414
cgcccagctt attaatagac atttaatata aag 33
<210> 415
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 415
cagttggtgg gaaagggctt aa 22
<210> 416
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 416
gaacagtaga tgtgcctttg gagt 24
<210> 417
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 417
acaaagaaaa taccgtattt ggaatccaat 30
<210> 418
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 418
ctagtctgta gtgttagcca ttctaaaaga 30
<210> 419
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 419
ttcccaaaag aaaaattatt gctgctgt 28
<210> 420
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 420
gtggctttta gtgtagtcac aggta 25
<210> 421
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 421
gggatctata gatttggaga aaacatgtat gtt 33
<210> 422
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 422
acaccatgct ctgttcttcc c 21
<210> 423
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 423
ctgttaagca agctgggtct ctt 23
<210> 424
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 424
ttttggcctc tttcagtgtt tattcattc 29
<210> 425
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 425
agtaaaaacc tagaagtttc tgtattctgt tt 32
<210> 426
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 426
catatgggtc tctggacaga gg 22
<210> 427
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 427
aatcactcat ttaacaaatc acattcatga aaa 33
<210> 428
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 428
cgggactaca agtgtgcatc ac 22
<210> 429
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 429
gctggaatgc ctcaggtaca tg 22
<210> 430
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 430
gagtaagtat tcacatatcg tgtgccttaa 30
<210> 431
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 431
agctgtgtct ttcttgcatc tct 23
<210> 432
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 432
ggctgtcacc ttaaaattga gttttaaaac 30
<210> 433
<211> 31
<212> DNA
<213> Rabbit calicivirus
<400> 433
agatactttg aatccttcta ccagatatgt a 31
<210> 434
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 434
attactattt ataatggcaa gatagcagtg at 32
<210> 435
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 435
tacaaaataa ccacaagccc tcagaa 26
<210> 436
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 436
ggcctcaaat agaattaggt ctttgtgt 28
<210> 437
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 437
cacctggcca gaagccatta tta 23
<210> 438
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 438
attatgacat tgcagttgtt tcatgctt 28
<210> 439
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 439
tccatagtta agcatacatg gaacgtattt 30
<210> 440
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 440
attagtttgt tgggctctgt gaca 24
<210> 441
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 441
gtttctttga ttgggtggca acat 24
<210> 442
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 442
caaaagagag gtggttccac ttaatagatt 30
<210> 443
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 443
gggatgcact tgtgaccaca ta 22
<210> 444
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 444
ggtgctttat ttaaatcaga tgcaaccaaa 30
<210> 445
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 445
aactcagacc aatctataca tagagtgaca 30
<210> 446
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 446
aggactccag agaccatgca tta 23
<210> 447
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 447
gtagtttcaa gccttcaaaa tcatgttga 29
<210> 448
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 448
gccactgatt atgtcacaac tttgttaaaa 30
<210> 449
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 449
aatttctgaa actcctgtgt ccttatgaat 30
<210> 450
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 450
tcatctgttc cgtggctttc tc 22
<210> 451
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 451
ttacataaga gttggactaa ggacaaggta 30
<210> 452
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 452
gagtgctgac agtttaggta aattagagtt 30
<210> 453
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 453
gtagtcattg actggcttgc cata 24
<210> 454
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 454
gaacaactga aagaatctgg ctacaaaaa 29
<210> 455
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 455
ctttcctttt tctgtagtac tctcagct 28
<210> 456
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 456
cggtgtttca tcacaaaagt atcctg 26
<210> 457
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 457
tcagtctatg tacctattgt acataaggca 30
<210> 458
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 458
cggaacctgc atcatatggg atttaa 26
<210> 459
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 459
tgacaatact aacttctgca taagctgag 29
<210> 460
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 460
gccagtgaaa cctcaggtga ta 22
<210> 461
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 461
tgcccttact ttaataacac cttgttgt 28
<210> 462
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 462
cacagttcct aaggtaatca tcaagtactt 30
<210> 463
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 463
gcctggcatc acaagagtct aa 22
<210> 464
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 464
gttgaagatc cagttcagag acga 24
<210> 465
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 465
cccttcaagt tcctcctctc att 23
<210> 466
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 466
cagagcaatc tgtggtttgt cac 23
<210> 467
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 467
ggttgagaaa ttctgtttaa atcctggttt 30
<210> 468
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 468
tatgcaccaa gcagcagaca tt 22
<210> 469
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 469
aaaaagccac acagaggaat aggtt 25
<210> 470
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 470
aagcatttga aactctgata atcagccta 29
<210> 471
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 471
agcgatatgt ctggttaatc caaattga 28
<210> 472
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 472
atgttcagaa gagctaaccc ttctttt 27
<210> 473
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 473
gcatccaatg aaaaagatct agacatgc 28
<210> 474
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 474
gaaaggcaat atagttgttc agtggaaatt 30
<210> 475
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 475
gggcaggatc ccttgaaatc tg 22
<210> 476
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 476
gggcaggatc ccttgaaatc tg 22
<210> 477
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 477
aacagcaccg ctcaggataa taa 23
<210> 478
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 478
gaggcctcag agcatttgaa ag 22
<210> 479
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 479
gaagacaaca gatcagaatc tgaagaact 29
<210> 480
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 480
cagtgttgca tcttctgtca gtagat 26
<210> 481
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 481
cccaaagcct gctaggaatt ca 22
<210> 482
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 482
cagactcctc cagatgctat gg 22
<210> 483
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 483
aaatacatgg gcaagcacat caag 24
<210> 484
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 484
catcctctga attactattt ttgccactag 30
<210> 485
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 485
cagatccgtt ctgtgaagga aaag 24
<210> 486
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 486
gtctctgtca gtgatgtccc aaag 24
<210> 487
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 487
gcctgaaaca aattttgaaa ggagatca 28
<210> 488
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 488
aaattttgcg atgtgaacaa atcagaga 28
<210> 489
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 489
aaaacctgaa aaatcttagg tgacagttt 29
<210> 490
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 490
tacgtgtcgc agaacatctg tc 22
<210> 491
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 491
gcatcctgac caggaagtga ag 22
<210> 492
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 492
catccagcac ttttctagcg ttg 23
<210> 493
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 493
tatagtcgag tgtagctttt tcgtgtg 27
<210> 494
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 494
ccaactctct caaagaccct tca 23
<210> 495
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 495
gaatttacct cactgtggag gtcaa 25
<210> 496
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 496
aatgctgtag aaatctttct aacaaatggc 30
<210> 497
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 497
tcacaattgt tgaaccaggg tgat 24
<210> 498
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 498
ggccgatcct tcaatgatct cat 23
<210> 499
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 499
taggagggtg aactgctaaa agga 24
<210> 500
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 500
tgatcagact agagtagtaa accaacagaa 30
<210> 501
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 501
ctgctaaaac agtgagcctc tgta 24
<210> 502
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 502
ccttgatcct tattaacact gggatttga 29
<210> 503
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 503
tatgtcgacc aaagaacatt tcgatga 27
<210> 504
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 504
gctttctgtg ttcttctgta catatgaact 30
<210> 505
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 505
ccctcattac ttttcttcct caagaa 26
<210> 506
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 506
gcagacattg gcaggaactt attc 24
<210> 507
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 507
ggtaagagag tggtggtttg aca 23
<210> 508
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 508
ctttttactt gcagagcagt atggtatg 28
<210> 509
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 509
agcacttcaa tgatatttta ccatcatcct 30
<210> 510
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 510
tgaaactgtc cttaacatga cttttgagt 29
<210> 511
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 511
ccagcaacat atctgctacc ttagaac 27
<210> 512
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 512
gcaagatgac ccatagttgc tatcatattt 30
<210> 513
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 513
cctgaggaac tgcaagcatg aat 23
<210> 514
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 514
ctggtcgaac aggaatttaa accatttaaa 30
<210> 515
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 515
ttggaagact ttgatgacga gatgag 26
<210> 516
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 516
gttgttgaac tcagtagctg tgaag 25
<210> 517
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 517
taattcccga gggcaactcg aa 22
<210> 518
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 518
agtcattttg ctttcatatc aactgcaaat 30
<210> 519
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 519
gtatatgtaa actaacaagg gccagaaca 29
<210> 520
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 520
aaagctgcaa gtgaatctat aaggtaactt 30
<210> 521
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 521
accctaaagc attttaagac ctaatgtagg 30
<210> 522
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 522
agctgtttac tggaagcaaa tgc 23
<210> 523
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 523
gagaacgtga agttcattcg cat 23
<210> 524
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 524
actaacctca gtatgatgac caatatgcta 30
<210> 525
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 525
actatgtaat ccaaaaccat gtagctacag 30
<210> 526
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 526
catgagcacc gacagtaact ca 22
<210> 527
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 527
tgaagaggca gtgtatataa aggtaacaga 30
<210> 528
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 528
ccctattaga atagggttgc tactcatctt 30
<210> 529
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 529
aaaaatgaaa gctagacaat agctgca 27
<210> 530
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 530
tgtcaagata gattcgagag aaagcac 27
<210> 531
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 531
cttaggcagg gatacatatt tttatccca 29
<210> 532
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 532
tgtattccac agcaaactta cataccataa 30
<210> 533
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 533
gggaagaaaa ttcttcctgc agattag 27
<210> 534
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 534
gctatttaca gagcattgaa tctgtaccaa 30
<210> 535
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 535
tccaagatac ctgtattctt gtttgtgg 28
<210> 536
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 536
ggacttgata attgctttct ttgagaagc 29
<210> 537
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 537
tctactggtc cttttggaat catagaaaaa 30
<210> 538
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 538
acatgatcct aagaggaaag ttctgttcta 30
<210> 539
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 539
actcaccgtt gaagagaagc aaa 23
<210> 540
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 540
tacttagtac tagacttcct aaagtcattg ctt 33
<210> 541
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 541
gctgaggata atcaataccg aaagataaga 30
<210> 542
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 542
actcagttgt tacgaaccat tttactga 28
<210> 543
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 543
ggctagagaa agagggagaa catt 24
<210> 544
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 544
agctgttaga ggaactattg cttgac 26
<210> 545
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 545
acagtctcgt agtatttcct gatgatttg 29
<210> 546
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 546
ggtattgctt aagcagtctg atcctaat 28
<210> 547
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 547
gtatgcctac atatttaccc aggacaa 27
<210> 548
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 548
agcatctaaa tgtagctttg gaatcatgta 30
<210> 549
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 549
tactcaggtg gctgagacat ga 22
<210> 550
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 550
ctcatgaata ggagcacttc ttgagtac 28
<210> 551
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 551
atgttgataa aggcctatgt tttaaatggc 30
<210> 552
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 552
ccaagtctat tggattccaa atacggtatt 30
<210> 553
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 553
ctcaacatca ttagttgtta gaggaatgtg 30
<210> 554
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 554
ctgaaataat tcatgtcata acagcagcaa 30
<210> 555
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 555
tggtatattt taaagaagac aaagcattga att 33
<210> 556
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 556
gcacccagcc aagtttatgt atttttat 28
<210> 557
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 557
caaaattaac tgtggtgaca gatgca 26
<210> 558
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 558
actaaagaag acccaaataa ttggagcatt 30
<210> 559
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 559
ctgggtggtg atgacacagg 20
<210> 560
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 560
tacttgaggc ctggagttcg a 21
<210> 561
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 561
acctttctcg gtggtactta aagc 24
<210> 562
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 562
gtcagctgaa cagaagccag gat 23
<210> 563
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 563
ccacagaaac ctcggaatac aact 24
<210> 564
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 564
aatcggactt gatttgccaa attcc 25
<210> 565
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 565
cgtctctact aaaagaatac aaaaagtcag ct 32
<210> 566
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 566
agtaaacaaa gtgagcctcc agtaaac 27
<210> 567
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 567
gagcagaagg tgactggagt g 21
<210> 568
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 568
caagaattta aaaatgtcta ctaccatcat ccc 33
<210> 569
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 569
tgtaactgag attgagatgc attttctcaa 30
<210> 570
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 570
tgaggtcaga attttcatgt tttcagc 27
<210> 571
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 571
agattgaaaa gtgaagacta aatccagct 29
<210> 572
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 572
ttcctgttat ctaatcaaga caagaacagt 30
<210> 573
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 573
agtacaggca gcactgttac attt 24
<210> 574
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 574
gtcatgccgt atagatacaa gattccttat 30
<210> 575
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 575
ctgcaaaagc ccatccagtt ttattaaa 28
<210> 576
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 576
ccgaaagtaa ccacaataat tttgattgct 30
<210> 577
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 577
tctgaaatac atcagagcct tcatcaaaat 30
<210> 578
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 578
ctgttttact gatgataaac gagattgctt 30
<210> 579
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 579
ccatgaaaac attcttcaca gaaatttggt 30
<210> 580
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 580
cgaaagctgt tctatgtttt gctgttattt 30
<210> 581
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 581
catacaagtc tcataagaac cacagcat 28
<210> 582
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 582
gccacctgcc atttaccttc ta 22
<210> 583
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 583
cactgaaacc tccatctcct gag 23
<210> 584
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 584
agaaaaatag gctcagttag aaaaggactc 30
<210> 585
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 585
ggccatgtat aagttacact gattttagca 30
<210> 586
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 586
ctgaggcacg agacttgctt a 21
<210> 587
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 587
ctggtgtggt agctcacaca 20
<210> 588
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 588
cggtctcgct gtgtcacac 19
<210> 589
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 589
gctagacgtg tgctctgaag aa 22
<210> 590
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 590
agctcaaaac tactttagtt aacttggtca 30
<210> 591
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 591
aaagttcact gggaagagaa ggttaa 26
<210> 592
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 592
agacactgga gtactggaaa ttgaaaa 27
<210> 593
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 593
atgttcgctc ctctcccttc ta 22
<210> 594
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 594
ccaatgaaaa cgctccagat tatcttttt 29
<210> 595
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 595
agcgtagttg gagttcatac ttgc 24
<210> 596
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 596
gcctcattaa aagaacttta aatgccaagt 30
<210> 597
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 597
tagtttggaa gcaaagcaaa aagaagg 27
<210> 598
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 598
aaaaagaaag tatagactgc catggtt 27
<210> 599
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 599
cccgcacctg taactcatat gtatc 25
<210> 600
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 600
cctcctcatc tttgtaaaat gcctaaattt 30
<210> 601
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 601
gtcaaaaagc aaacagccag acattt 26
<210> 602
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 602
ctccctttaa gagcacattc ttctgta 27
<210> 603
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 603
cccagccaaa tgctgtagag ag 22
<210> 604
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 604
agtatgtcac atggtttatc aggtgaatt 29
<210> 605
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 605
caagttgcat tcttcttttc aaacacac 28
<210> 606
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 606
tgtacgtacc aaaatgctct tttatctgtt 30
<210> 607
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 607
gatggctacc acaattattt atccatgc 28
<210> 608
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 608
ctgctctcca actgcataga ca 22
<210> 609
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 609
ccttgaagtt ctggccatcc tt 22
<210> 610
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 610
gtggacttgt gtatcttcga agaagtaata 30
<210> 611
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 611
ggttagctca agtttaactt ttagtttgct 30
<210> 612
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 612
cagtgcattc accaacagga tattttt 27
<210> 613
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 613
ccagaaatac ttaaagaaac tgtcccatca 30
<210> 614
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 614
tacagttcag aatgacacat tgtagtgg 28
<210> 615
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 615
ccttctacac attttagcca gaatgct 27
<210> 616
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 616
ccttacctgc tattcttgta cttgtctc 28
<210> 617
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 617
tccatctctt tctgcaaacc acat 24
<210> 618
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 618
gtcttttggt ttctgtcagt agaaataacc 30
<210> 619
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 619
actttgtttc tccacctaaa ggaagag 27
<210> 620
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 620
cttgaactca ggagatggag gtttc 25
<210> 621
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 621
agattacagg cgtaagtcac tgc 23
<210> 622
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 622
ttcttttaag gtgacccatc tgtgataaaa 30
<210> 623
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 623
ccgcctccca ggtattaagc 20
<210> 624
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 624
tctcccaaag tgcgaggatg 20
<210> 625
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 625
acttgggaag ctgtgacagg 20
<210> 626
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 626
atgtgtgtca tgtggtcttc tgaaa 25
<210> 627
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 627
cacctggtca ggacttactt tcc 23
<210> 628
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 628
tcctctgtca aaatctgagg tatttgaaaa 30
<210> 629
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 629
gtaattgaag ccaccaaagg cat 23
<210> 630
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 630
ctcagaccta gccggagcaa agt 23
<210> 631
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 631
aatgctactt atgaagtgac tgccaa 26
<210> 632
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 632
atcaactttc ctgcaaaagg gaaac 25
<210> 633
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 633
attagttttt cagtggtgga atgtttcatg 30
<210> 634
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 634
atggatattg gaaagcgaaa gagtaagt 28
<210> 635
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 635
gtcttgtctt ataggtcaca gcactt 26
<210> 636
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 636
gagagcacaa aggacctgtg a 21
<210> 637
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 637
tgggttgcca atgtagaagt ttatct 26
<210> 638
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 638
gtcttttagg acccttccct tga 23
<210> 639
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 639
cctgtccgtc aggtactgac t 21
<210> 640
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 640
cctccattaa cgacctgctg tt 22
<210> 641
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 641
tcactttctc tctacttgat gtctcact 28
<210> 642
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 642
cagtacagct tcagcactga ca 22
<210> 643
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 643
atccagccgc actgaccaga t 21
<210> 644
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 644
aggtgacctt catccaagca tg 22
<210> 645
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 645
ccttcagtcc aagcatactg gt 22
<210> 646
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 646
tgaggtgaga tgcaacctga atc 23
<210> 647
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 647
gaaggaggcc gtcatcttgt 20
<210> 648
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 648
ccgcctacct caggcttatc t 21
<210> 649
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 649
ggtgaatcgg gattagcgtg taa 23
<210> 650
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 650
tatcgttagt gctagtggat tttacatgtg 30
<210> 651
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 651
ggatgctacg agccgcat 18
<210> 652
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 652
ccacaagttc gtgcctggt 19
<210> 653
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 653
caaagaagag cttcacatag gcatc 25
<210> 654
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 654
ggccctgagt cagtacctga 20
<210> 655
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 655
gatgaagtgg gtgccgtagt t 21
<210> 656
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 656
agtcctgaag gagttatttg attgaatgg 29
<210> 657
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 657
ccagttaagg caatgaaggc tttg 24
<210> 658
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 658
ggagattcag actgtttttc aggga 25
<210> 659
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 659
cgcaggaacc tttgtgtgtc 20
<210> 660
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 660
agggagcagt catcctccat 20
<210> 661
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 661
acctggcatg atagcggaat tt 22
<210> 662
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 662
gcaccgtgtg ggacaataac aa 22
<210> 663
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 663
gagtttaccc aggctgagta ctg 23
<210> 664
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 664
caaggcctgt gaggagaaga ag 22
<210> 665
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 665
cccagctctc acctgtagaa g 21
<210> 666
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 666
gccaaagtca gctccactga ag 22
<210> 667
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 667
tgatgcgtat ccaatctttt ggct 24
<210> 668
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 668
ggctgtcttc gtattcccat tagac 25
<210> 669
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 669
aaacgatttg tcacagaagt agagca 26
<210> 670
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 670
gctgaaggca ttgcttgtag tt 22
<210> 671
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 671
tcatttttgt tataaatgca cattgggctt 30
<210> 672
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 672
gctgggcact ccataaacag tatc 24
<210> 673
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 673
gcaaatgcca agagtttgag aaaatg 26
<210> 674
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 674
gtgaaagagg aggaagccat agcact 26
<210> 675
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 675
ctgtcagcac agccttttca at 22
<210> 676
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 676
accagtgtac tttaccaata tacagatggt 30
<210> 677
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 677
acattgagct gatgtgcatg tatattctta 30
<210> 678
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 678
ggcccagagt cttacattta agatcttac 29
<210> 679
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 679
tctcctaact ctcaggctga atcttaa 27
<210> 680
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 680
cctctacgga tcagttaagt gaagaaaag 29
<210> 681
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 681
gccagcacat aggccaagta taa 23
<210> 682
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 682
gggcaggctg gcttaatgta at 22
<210> 683
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 683
acacacaaat ttgacagact agacca 26
<210> 684
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 684
ccactggcct taaacataca attaagtg 28
<210> 685
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 685
agtgtaacca tcacgcaaat atacttgtat 30
<210> 686
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 686
gtgtcttcat accaaattaa aggtggtttt 30
<210> 687
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 687
ctttggcaat gcagcggaat aa 22
<210> 688
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 688
ccagcaggct ctgtattgtt gatattt 27
<210> 689
<211> 17
<212> DNA
<213> Rabbit calicivirus
<400> 689
ctggccaacc ctgctct 17
<210> 690
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 690
tccttccact actcccataa caaactta 28
<210> 691
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 691
tttttgggtc gttggcgg 18
<210> 692
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 692
gtgttgggac aaaggaggcg ag 22
<210> 693
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 693
gggtagagaa ccgcttgtta tga 23
<210> 694
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 694
gccatatgac aaacagctga gactaat 27
<210> 695
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 695
aacgaattgg ctggcttttt cc 22
<210> 696
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 696
cctttgggat ttgtactgaa caaaaagg 28
<210> 697
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 697
gcagctggcc tccaatttca ta 22
<210> 698
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 698
cttaggactt ggtggccaat tg 22
<210> 699
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 699
gggagacaga agtcccactt tg 22
<210> 700
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 700
gtgacattct aaaataccat taaagccact 30
<210> 701
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 701
gacttctcca caaaaatact cacccat 27
<210> 702
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 702
gcatgtattg ttcactgatc atacacttac 30
<210> 703
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 703
ggattgaaga ctgtggcggt tt 22
<210> 704
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 704
cggttctaaa attaatttgt tgcagctttg 30
<210> 705
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 705
acttgacttc tcaacagcca cat 23
<210> 706
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 706
ctctcctttc cctccacatg ttg 23
<210> 707
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 707
tcaatgccca ctgttgtgat aaatttg 27
<210> 708
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 708
cgtagacata caggttaaca ttaggtgtta 30
<210> 709
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 709
cagtgagcac ctaatggaac gt 22
<210> 710
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 710
gtgaaccatg tgccaattaa gctg 24
<210> 711
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 711
gtggcttttg tgtgtgcact a 21
<210> 712
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 712
aaaaagagca gggtcataat cacac 25
<210> 713
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 713
ggaatttaaa agaagccttc atttcaagga 30
<210> 714
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 714
agtatatttg cgtgatggtt acactagaag 30
<210> 715
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 715
agccattaag atctctggaa gttttga 27
<210> 716
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 716
gcatttactg tacttgctgg gtctt 25
<210> 717
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 717
aattatttca attccaccaa tggaaaagca 30
<210> 718
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 718
ggaactagat tttatggctt tagttcactg 30
<210> 719
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 719
ccactccgtg gtcactgaaa at 22
<210> 720
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 720
aagcattggt aactccagtc tctaac 26
<210> 721
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 721
cctagcacat tttgtaggtc tttttgt 27
<210> 722
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 722
gttgactcat aactctgagc ttcca 25
<210> 723
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 723
tggatggcag ctatttgctg ag 22
<210> 724
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 724
ggattgaggc gaaagtgtgt tc 22
<210> 725
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 725
caagctcgat cgaaccaagc ta 22
<210> 726
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 726
ctgctgattt tgccatgata cacag 25
<210> 727
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 727
tgtagataat acagttcggt gagctacaa 29
<210> 728
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 728
cgtttcaaag ctcctcacta tgtacaa 27
<210> 729
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 729
agtttttgtg aaaagctcca tttttagtga 30
<210> 730
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 730
tttagtgctt gttttagcac acagtatac 29
<210> 731
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 731
cgtatttgat gctacaggat ttgaaattgt 30
<210> 732
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 732
cgtgtaggtt tcaatcactt ggaattttt 29
<210> 733
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 733
gcgctgaggg catagaagta aaaa 24
<210> 734
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 734
tatggcccat ggaccagagt at 22
<210> 735
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 735
cgtgggagta caaaagtgga gt 22
<210> 736
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 736
ctcttggaag tgaacatgca aacataa 27
<210> 737
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 737
actatgcttt acttcctatg aatgcaatga 30
<210> 738
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 738
taaaaccagc ctaaatttca aatacctcct 30
<210> 739
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 739
gcatctagca tgtcgtcaaa gct 23
<210> 740
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 740
ccaccataca atcaagcaag acattttaaa 30
<210> 741
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 741
cctctatcat caactcctta tgggcta 27
<210> 742
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 742
ttctcacact tcagttaaaa cgagct 26
<210> 743
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 743
gcatctccct tgcacagttc tc 22
<210> 744
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 744
cacagcacac ataggcagta ca 22
<210> 745
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 745
tcattgtgag ttttatgcag ttggaaatt 29
<210> 746
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 746
cttccattac aggactacaa tggctt 26
<210> 747
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 747
ggtgtcatag gctcttttgg ga 22
<210> 748
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 748
ggcagaggta aatgaaaaga aaaactcatt 30
<210> 749
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 749
tacaaaacca ctggaaagtt tatggttgta 30
<210> 750
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 750
aacaagacag tgaactgaga gca 23
<210> 751
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 751
agatctggtc tttagaggca gatagatag 29
<210> 752
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 752
gaaatggtaa accacccata atgcatt 27
<210> 753
<211> 31
<212> DNA
<213> Rabbit calicivirus
<400> 753
ctctataatg tgttcattct ggaataatcc t 31
<210> 754
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 754
gaatcactcc gataagataa tcatcaatcc ttt 33
<210> 755
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 755
tgggactgct gagtaaaatg tttaagt 27
<210> 756
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 756
cagctggttt tcatcctgaa tgtc 24
<210> 757
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 757
agtaaaagaa ttctgttttt caagcaagct 30
<210> 758
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 758
cgcccagagt cccaacttc 19
<210> 759
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 759
gcgaggtcat ccactgcaa 19
<210> 760
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 760
ctgctcgaac atgtcctcga t 21
<210> 761
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 761
ctggctcttg gtattggttt gc 22
<210> 762
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 762
cgccatatgt ctaccgccat aac 23
<210> 763
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 763
ccctttccgg aactcagtct ttag 24
<210> 764
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 764
tacagtcaga tacaacttca gttccttact 30
<210> 765
<211> 31
<212> DNA
<213> Rabbit calicivirus
<400> 765
tttttatgtt tttagtaaag acggtgtttc a 31
<210> 766
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 766
ctcagctatt tgtaggctga ggtg 24
<210> 767
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 767
gtgggtgaaa tgctggcttt tt 22
<210> 768
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 768
gagtgtataa aatttgcaga attgccaca 29
<210> 769
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 769
cacagattat aggtggtaac aactcca 27
<210> 770
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 770
gcctgaacat atctgcatat gacatttaac 30
<210> 771
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 771
aaagttccta acttgacagg aaactactg 29
<210> 772
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 772
gcaatgattt tcaactccgc tatca 25
<210> 773
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 773
agctgtggtc gcttcctaag 20
<210> 774
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 774
ctcaggaaga gaaaaacaaa cctggact 28
<210> 775
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 775
actttagcaa aatcatgagg ctttagaga 29
<210> 776
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 776
ggatagattt tcctggtcat aagcaagtc 29
<210> 777
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 777
cacctttgac ttaatttgct ttctctaagg 30
<210> 778
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 778
cgaactctcc aatataaaac gtgaggaatt 30
<210> 779
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 779
tactgcacca aaagaatgag tgaact 26
<210> 780
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 780
aggtgctttt acatattcag tcatcactt 29
<210> 781
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 781
agtttttaag tacagaggaa aaataaagcc tat 33
<210> 782
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 782
gaaagaacac ctgccaagct g 21
<210> 783
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 783
tacacgagct cttcttgcag atg 23
<210> 784
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 784
ctacttgagg cagggacagc agaa 24
<210> 785
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 785
ttggccttgg gaaaaaccac gt 22
<210> 786
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 786
tatcagcgaa aaatacacaa aacatgactg 30
<210> 787
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 787
ccacatcctg gagtccctgt a 21
<210> 788
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 788
cctcgctcag ctccttcatg 20
<210> 789
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 789
cgtgcagtac gaggagaaga ac 22
<210> 790
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 790
gctggtttgc aattcttgaa cctg 24
<210> 791
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 791
gcactgaata tcgaacaagc actca 25
<210> 792
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 792
gggcaaactg gagtgaaaca aa 22
<210> 793
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 793
cagtttgggt caaacttcat gttaaaca 28
<210> 794
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 794
agtaaactaa atggtcaagc cagaaatgta 30
<210> 795
<211> 17
<212> DNA
<213> Rabbit calicivirus
<400> 795
gcgcgtgcca caatgtc 17
<210> 796
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 796
ctgggagttt aaggctgcag taa 23
<210> 797
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 797
tgaaaggtga ctttggccaa ga 22
<210> 798
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 798
gcatactaga tgagcacctt tcctagt 27
<210> 799
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 799
cgcaacaggt ttccttctcc at 22
<210> 800
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 800
ccaaaatccc acctaaggca ca 22
<210> 801
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 801
ctcaaacttg tgagcttgag caatc 25
<210> 802
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 802
ggtaagggca ttaagaagtt tgcag 25
<210> 803
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 803
gagatcatgg gcaaggaagt ct 22
<210> 804
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 804
tacgttgagc tcgatgacgt tc 22
<210> 805
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 805
tagaaggagg agtatgtgaa ttctttgga 29
<210> 806
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 806
tgcagtggag ctatgtgaac attt 24
<210> 807
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 807
tgcttggaac cattataaaa gtaagtgagt 30
<210> 808
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 808
agcaggaaga agaagtgttc tttcc 25
<210> 809
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 809
aaacggagat aacagtactt acctcataga 30
<210> 810
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 810
gggtcttggt ttctttattc cattttatta ttt 33
<210> 811
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 811
ttccaccaaa aacacgtaag caggaa 26
<210> 812
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 812
ctcttggtgg cactagaaca ca 22
<210> 813
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 813
caccttgcac tcttaccgtc tt 22
<210> 814
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 814
catagcgtag accggatgaa gaatc 25
<210> 815
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 815
tgtcatatgc agatatgttc aggctcta 28
<210> 816
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 816
ctgcagttgg agatacttcg cata 24
<210> 817
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 817
caattgtaat cagagcaaca gttgact 27
<210> 818
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 818
tcgttttaaa gcatcctttg tagtctca 28
<210> 819
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 819
gacagagtga gatcctcctc tctt 24
<210> 820
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 820
ccataggcct gatgatgagc t 21
<210> 821
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 821
gctgagatga ggtaggaccc aaa 23
<210> 822
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 822
ccattccgaa ggaggatgta gag 23
<210> 823
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 823
ccctgactct caccttcaaa c 21
<210> 824
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 824
ctgggagcgg gttttctct 19
<210> 825
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 825
ggtgtggcca tgtcagagat g 21
<210> 826
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 826
cgctgccttc gtctttgaca 20
<210> 827
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 827
ggcgtatgat ctgctggaca ta 22
<210> 828
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 828
gacacatctg cgatatgcat gtg 23
<210> 829
<211> 17
<212> DNA
<213> Rabbit calicivirus
<400> 829
taacctgcct ctcggcc 17
<210> 830
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 830
tgtgccagtg accgaagcg 19
<210> 831
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 831
cagactggcc tccaatttca c 21
<210> 832
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 832
gtctcagtcc aggctcgaaa t 21
<210> 833
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 833
ctccctttcc agagaaataa actcttcc 28
<210> 834
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 834
aggctaattc tccttctgag aggataatag 30
<210> 835
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 835
gggttgtcca gccagctta 19
<210> 836
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 836
gggcagtaga ggttgtaggt 20
<210> 837
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 837
catccatctg gacaggtgct tatc 24
<210> 838
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 838
gatcctacac tcaagggctg aa 22
<210> 839
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 839
agtctggagg ccatttattt gct 23
<210> 840
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 840
cgtatacaca tgcacacatg caatc 25
<210> 841
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 841
ggttcaggcc ctgatcaaag ac 22
<210> 842
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 842
ggaggaaggc aaggtgaatc tc 22
<210> 843
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 843
gagcccacct atcagctgt 19
<210> 844
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 844
ccctaagccc tgaggcttag 20
<210> 845
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 845
ccaggcgaac atcaaagacc ta 22
<210> 846
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 846
cgagcccttg aagtgcttca ta 22
<210> 847
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 847
cacagctctc cttgggtcat tt 22
<210> 848
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 848
tagtgtgagc aagagtggga aac 23
<210> 849
<211> 17
<212> DNA
<213> Rabbit calicivirus
<400> 849
ctccagcgac ttcgtgc 17
<210> 850
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 850
ccggagaggc actcactt 18
<210> 851
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 851
tccagcatgc caatgtacag g 21
<210> 852
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 852
taagctggga ctgggagagg c 21
<210> 853
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 853
gggagcctgt caaagacgaa g 21
<210> 854
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 854
gactcccttg ataagaaggt gaggta 26
<210> 855
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 855
gtcactggca caagaacaag gct 23
<210> 856
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 856
cctggtgact taccaatgag ca 22
<210> 857
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 857
cccaggtgtt ctccctcgat 20
<210> 858
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 858
ggtgttgcac gcggttaag 19
<210> 859
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 859
gcaaaggtgg tgaagacgtt ga 22
<210> 860
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 860
cagtgtctgt ttctgaggga aca 23
<210> 861
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 861
ctcctgagga ccttctgtga ga 22
<210> 862
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 862
ctggtactgc ggcatctttt tc 22
<210> 863
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 863
cagtattcta cgcacctgca tcta 24
<210> 864
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 864
ctaggaccgt ttctccacaa gac 23
<210> 865
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 865
gggagaagat caaggactcc atga 24
<210> 866
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 866
cggtgagtgc aaatgaccca a 21
<210> 867
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 867
ccagaggcag ctcatcatca g 21
<210> 868
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 868
gaagacaaga tgcgcatgct t 21
<210> 869
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 869
gctcttagct ggtggtccct aa 22
<210> 870
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 870
ctcactcatg taggcacctt ct 22
<210> 871
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 871
ggacgaggac gatgacttgt g 21
<210> 872
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 872
atgagggcca aagacttggc a 21
<210> 873
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 873
ctgaacgcct tcaaggcaga ca 22
<210> 874
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 874
gttccaagtc tgcagacctg tat 23
<210> 875
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 875
gggaaagtga gtgcctctcc 20
<210> 876
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 876
ttctggcacc ggagagcag 19
<210> 877
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 877
ttctctctct cgctttcttg ctg 23
<210> 878
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 878
gccacccagt acctccatta c 21
<210> 879
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 879
atgtgggtgc gacactagtg 20
<210> 880
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 880
cactgtcggt gaagaagata tggg 24
<210> 881
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 881
cccaaggagt tatggaatta gattcgt 27
<210> 882
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 882
atacgaaggg ccacaggttc ct 22
<210> 883
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 883
cctccaggtt tcccactctt g 21
<210> 884
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 884
ctgctccagg ttacggatga g 21
<210> 885
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 885
gagcttggaa gggattttgc tg 22
<210> 886
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 886
gcctcttggc tgagtaagct tg 22
<210> 887
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 887
ctctatcacc agttcctcat gacttc 26
<210> 888
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 888
tcaatgtagg tcttgtggtt cagaac 26
<210> 889
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 889
ctggtctcac agctcaaatg gt 22
<210> 890
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 890
cccaaagttc tgattctcat tggagaatat 30
<210> 891
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 891
cctctcaggg catgatcaca ag 22
<210> 892
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 892
cctactcacc cacagaatgg tg 22
<210> 893
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 893
gacaaagtcc aggtgtcctt ga 22
<210> 894
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 894
ggagtctcac gtgaatcctc ctaa 24
<210> 895
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 895
cacaggagcc cttggagttt at 22
<210> 896
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 896
ctgaaggcag acctaggaca ag 22
<210> 897
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 897
caactgctct ttagagatac acgctt 26
<210> 898
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 898
cggtccatcc aaggtaagag gt 22
<210> 899
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 899
gcccttagct gatctgacca tg 22
<210> 900
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 900
tgttctgatg gccatggtga tc 22
<210> 901
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 901
tgactacaga cccaaggatg ga 22
<210> 902
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 902
cagaaagact tcccagggaa gatg 24
<210> 903
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 903
gcatctcaga ctccttggca aaaa 24
<210> 904
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 904
tccacaggcc atcaatgctt t 21
<210> 905
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 905
gcctcaagat gtctcacatg gt 22
<210> 906
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 906
gcaagaatcg ggaaagactc ct 22
<210> 907
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 907
gaggattaat cagtgacagg aagct 25
<210> 908
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 908
aagttccctc atcctatgcc cta 23
<210> 909
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 909
ggcagtttct cacaaaggca tt 22
<210> 910
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 910
gctcaccaat ggctctcttc tc 22
<210> 911
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 911
atgggtctcc tgcttcctct aa 22
<210> 912
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 912
aggccatact ggtagtagct agtg 24
<210> 913
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 913
aaacttctgt atgctgtgga acctt 25
<210> 914
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 914
gtccctaaag gacttgattc gga 23
<210> 915
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 915
accgtggaag atgtcctgaa ga 22
<210> 916
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 916
ctgagcaggt agaagcagaa gca 23
<210> 917
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 917
tccagaatgc tctcatgatt tccc 24
<210> 918
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 918
agcaaatcag gatgaagcaa cct 23
<210> 919
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 919
tggacagcca tctggtagag aa 22
<210> 920
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 920
cccatctctt agtatgtgga gcaaga 26
<210> 921
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 921
ctgaagcgct caaacttcaa cc 22
<210> 922
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 922
ctggtgatag agtgaggaag agaga 25
<210> 923
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 923
cccaggtgga ttcttacaga ctc 23
<210> 924
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 924
gctaaccagc ctcagctcaa tg 22
<210> 925
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 925
cctcctgtgc actttgagca at 22
<210> 926
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 926
agaacgagtg gtcttcacaa cac 23
<210> 927
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 927
agtgcctgcc tctgacaaaa tt 22
<210> 928
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 928
tgggtgctca gtcagtagtc aa 22
<210> 929
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 929
agagatgcag agcttcctga ac 22
<210> 930
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 930
ccaagtcgct gaaattccca tg 22
<210> 931
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 931
tgatgtagag ctggaacaga ctct 24
<210> 932
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 932
ctcaagatcc acctcttctc catg 24
<210> 933
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 933
cccaggctca gctttgtgag 20
<210> 934
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 934
gtggattcca gcctaatccc t 21
<210> 935
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 935
ggagccaggt aggctgaaga 20
<210> 936
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 936
gtgtggtggt gaatgacatg ga 22
<210> 937
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 937
gtgacctcgt gggacacaa 19
<210> 938
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 938
tccagttcca actcatccat aagc 24
<210> 939
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 939
agaggtttga gaaggaagca gaga 24
<210> 940
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 940
gaagtttggc agggataggc ta 22
<210> 941
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 941
ctgaagagcc aggagatgct tta 23
<210> 942
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 942
cagcatcgag taccagtgga t 21
<210> 943
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 943
tgctacagac ctgctgaagt tc 22
<210> 944
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 944
aaactgctct cacagaacgg tt 22
<210> 945
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 945
ccactgacat ctttgcccag aa 22
<210> 946
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 946
tcagggagct tgaggtaacc t 21
<210> 947
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 947
ggccttcatc ttgcacatct gta 23
<210> 948
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 948
tgcagtctct tctcaggtca gt 22
<210> 949
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 949
cagggaagct gttctccgac 20
<210> 950
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 950
cgtgctggac tacgacacg 19
<210> 951
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 951
cacatggttg ggctcaggat 20
<210> 952
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 952
catggcgaga ggtgttggt 19
<210> 953
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 953
ctgctcactt gtggaagatc ttgt 24
<210> 954
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 954
ctcactgcct ctttgtcgac a 21
<210> 955
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 955
cacatccagc tgcaaactct tg 22
<210> 956
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 956
caagaaggac cttcacccat tgt 23
<210> 957
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 957
gcagaagtac ttccggatga gttc 24
<210> 958
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 958
ggacatgtta cccttgacag tga 23
<210> 959
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 959
accgcatcag ccgaatct 18
<210> 960
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 960
tgccaccgtc ctctttctg 19
<210> 961
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 961
cccaccaggg ttatcattgc tg 22
<210> 962
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 962
ctttctcaag agcgtctttg cttc 24
<210> 963
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 963
gaagccacag gattatgcaa agag 24
<210> 964
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 964
gaggagggtc ctgtagggat 20
<210> 965
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 965
acaggaactg gtatgcctgg ta 22
<210> 966
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 966
gccacctaga aactttctta gcaaaaa 27
<210> 967
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 967
cctcagagcc agaaggttct tg 22
<210> 968
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 968
gcacagagtc tcctggaaaa gg 22
<210> 969
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 969
accacagcag cttttctgag ag 22
<210> 970
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 970
ctcagcagcg acatctctac tc 22
<210> 971
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 971
tacccgagac cacagtgctc 20
<210> 972
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 972
ttgcgccagg ccatcaagat 20
<210> 973
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 973
ccctcctggt aactggagga aa 22
<210> 974
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 974
caggcagaaa ccacctctga g 21
<210> 975
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 975
ggatatccag aggcagcgtt 20
<210> 976
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 976
ataatttcca ccgctggttc ca 22
<210> 977
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 977
caggatgaag gtctcgtccc 20
<210> 978
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 978
tgatgagggc ctctcccagg 20
<210> 979
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 979
cctcgttgta cgtcttctgc a 21
<210> 980
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 980
gagtctgttc cagctctaca tcag 24
<210> 981
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 981
ttggccacct gcaaaggaaa gg 22
<210> 982
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 982
aagatcttcc acaagtgagc agatag 26
<210> 983
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 983
ggtggtagtg tggctgttct ag 22
<210> 984
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 984
gctgctctat gaatgaagga agga 24
<210> 985
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 985
tatgtagccg accctggaca tag 23
<210> 986
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 986
tgaagattgc cctgcaggta ac 22
<210> 987
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 987
cagcatccag tgtgcatgtt g 21
<210> 988
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 988
ctagggatgg gaagggaagg gat 23
<210> 989
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 989
ggtggaagtc ggataggtcc tt 22
<210> 990
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 990
cctcattgca gagagccact t 21
<210> 991
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 991
tgcactcact cctccaacaa tt 22
<210> 992
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 992
ctaaagcatc tcctggctct tca 23
<210> 993
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 993
actgcatgcc tacctgttct g 21
<210> 994
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 994
gttttcagcc tgtactggtg gat 23
<210> 995
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 995
cggaagggtg agggtttcac 20
<210> 996
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 996
aggtcagctt ctctcagggt t 21
<210> 997
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 997
cggtctgggt aggtctcagt 20
<210> 998
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 998
gctctgtgtc ctcacaaagc tg 22
<210> 999
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 999
aaggcctcgc cttccaggt 19
<210> 1000
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 1000
aacccatgtg ccgaggctg 19
<210> 1001
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1001
cccagggaga gaacatgctt tg 22
<210> 1002
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1002
gtctaaactc aggccctaag gaac 24
<210> 1003
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1003
acccataagg gaggtcacca aa 22
<210> 1004
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1004
gagctttgct acatgaacac caac 24
<210> 1005
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1005
tgcttcaggt ggaaccattc ag 22
<210> 1006
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 1006
tcgacacagc tctttccatc ttg 23
<210> 1007
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1007
cgggacccac tcacaattca aa 22
<210> 1008
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1008
gcatttcctc cagttaccag ga 22
<210> 1009
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 1009
cggtaggagg ccttgactgt 20
<210> 1010
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1010
cctcagctgt atgtgttccc a 21
<210> 1011
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1011
gctacagggc ttcttggaag tg 22
<210> 1012
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 1012
tgtctgaagg caacagtgaa aca 23
<210> 1013
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1013
aggcatattt taagaggaca atggatttgt 30
<210> 1014
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1014
agggtggtgg ccattactag a 21
<210> 1015
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 1015
ctggagcctc atctttggca 20
<210> 1016
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 1016
ggctgcaatg tctctaccac atc 23
<210> 1017
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1017
gggatcctgt agatctctga ctct 24
<210> 1018
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1018
cagccaccct ccctaaaact tc 22
<210> 1019
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 1019
gtgcagcgga gggagttga 19
<210> 1020
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 1020
catacccttg gcctggatca 20
<210> 1021
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 1021
cgggcaactt gccgatca 18
<210> 1022
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1022
ctcttcaggc cagaaggacc aa 22
<210> 1023
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1023
tcttgttctg tcccatctga ccta 24
<210> 1024
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 1024
caggtcatca cccagacact 20
<210> 1025
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1025
ccaggttacc tcaagctccc t 21
<210> 1026
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1026
cgcactctac actgtcttgc a 21
<210> 1027
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 1027
gaaagccctt gcaagtccc 19
<210> 1028
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1028
ccacacactc ttctctgcca c 21
<210> 1029
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1029
gtcttgtttt aagctgtgag attttcatgt 30
<210> 1030
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1030
cccactgcat gctatccaac tt 22
<210> 1031
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1031
aaacaatatt catttaactc attcacttga gg 32
<210> 1032
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1032
gctctcatct ttaaagccca tcatacattt att 33
<210> 1033
<211> 18
<212> DNA
<213> Rabbit calicivirus
<400> 1033
actctgcctc gcaagcag 18
<210> 1034
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 1034
ccgcgaaacc agtcactact aaaaa 25
<210> 1035
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1035
ggttgcaagg gcctcatttt t 21
<210> 1036
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1036
gtcagggcct caaagagaca c 21
<210> 1037
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1037
cgaggaaccc tgccatgtat ag 22
<210> 1038
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1038
acagcatcag attcacttcg aatattaaga 30
<210> 1039
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1039
actagaagaa ttggtaaata tgcttgttaa ct 32
<210> 1040
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1040
ggccaatatg gtaaaactcc gtct 24
<210> 1041
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1041
tttcagatga taccatcttc caaaatcct 29
<210> 1042
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1042
gcataccttt ctgtaatgaa gtctgactt 29
<210> 1043
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1043
aattttccaa gtggtagtcc tgtttca 27
<210> 1044
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1044
aatttgtaga ctgcgtggca ctat 24
<210> 1045
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1045
aaggattcat ccttaatcct tgctagtt 28
<210> 1046
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 1046
ctacaagcag tgtacaaaca tgcttc 26
<210> 1047
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1047
ctctacctac atttgttttc ttggctagta 30
<210> 1048
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1048
ccctggacgt tctatgaagc attttta 27
<210> 1049
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 1049
tcctgacctc aagagatcca ctc 23
<210> 1050
<211> 19
<212> DNA
<213> Rabbit calicivirus
<400> 1050
gtggcagaca gtgcaaagg 19
<210> 1051
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1051
gttttccagg acacttcact tcca 24
<210> 1052
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1052
acttgttagc cacatcagcg tt 22
<210> 1053
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1053
gtttgaacta taaaaagcac cggatctt 28
<210> 1054
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1054
gacaatgctt ttgatcagca gactaaatta 30
<210> 1055
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1055
ccctttgatt acgggctaag gtag 24
<210> 1056
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 1056
cccattcaac acctgtgtaa tca 23
<210> 1057
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1057
ggtagcagtt tattcatctg tgaaaggaaa 30
<210> 1058
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1058
atcttatcta tgagaaacac caaaaactat ga 32
<210> 1059
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1059
gtcaatacaa atgttagcca ggcg 24
<210> 1060
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1060
agaaagctca actaaatttg agaagaataa tct 33
<210> 1061
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1061
tcagtttgac tcatacagtt aacacaatgt 30
<210> 1062
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1062
ccagtcaggg ctctgctact aa 22
<210> 1063
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1063
catatatagc cagcccttca tatctgtg 28
<210> 1064
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1064
tgcaccaacc ttaatgctat gtaaatagtt 30
<210> 1065
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1065
attgtattag gtattaaagt catctggaca tg 32
<210> 1066
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1066
ttcatcacat actttattta ttctgagaca agg 33
<210> 1067
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1067
taagcgtcct caggtcctag gg 22
<210> 1068
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1068
agtcgctcta gtagctggga c 21
<210> 1069
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1069
aaatgctaca ttaatgtttg ggtggtc 27
<210> 1070
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1070
acaattagat cagtcagtca ggttaaaata taa 33
<210> 1071
<211> 17
<212> DNA
<213> Rabbit calicivirus
<400> 1071
ttggaccgag ccgatcg 17
<210> 1072
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1072
ctgaagtcac ccacccaccc a 21
<210> 1073
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1073
aaaaatgtac atggcagtgt tttagttg 28
<210> 1074
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1074
agtatgatgc ttcttattct tagtctatgg ttt 33
<210> 1075
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1075
ttcttttaaa gttataaaca cgtacttgtg cg 32
<210> 1076
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1076
cccgaagaga aaccacattt aaca 24
<210> 1077
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1077
gtattttgct gatttaaagg cttaggcat 29
<210> 1078
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1078
ttttcatcca caaagcagga aaaacat 27
<210> 1079
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1079
tttctgtgtg gaaaactaag aaaattgctt 30
<210> 1080
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1080
gttacattgc agtattttta agagggtgat 30
<210> 1081
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1081
gggctcaata aatgttttca atgaatttaa ac 32
<210> 1082
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1082
tttttgcttg aaagtaatga ctgtgtag 28
<210> 1083
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1083
attagataat cttatgactt ccttctagct cca 33
<210> 1084
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1084
ttggcagtta aattaaaagg atagttaaca agc 33
<210> 1085
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1085
cttcccaaag cagctttgct tt 22
<210> 1086
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1086
gtgatttata gttgctccca gatatctgaa 30
<210> 1087
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1087
tttaacctta aaatgacagt gggataggg 29
<210> 1088
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1088
ataaattata tgagacttac cagacactcc tca 33
<210> 1089
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 1089
aacaaaagtc tgttgcttgt gtttca 26
<210> 1090
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1090
tatctccttc accagtataa agaaaccct 29
<210> 1091
<211> 31
<212> DNA
<213> Rabbit calicivirus
<400> 1091
tgcaagacct tgtctcagaa taaataaagt a 31
<210> 1092
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1092
taactgggca ccgtggagca t 21
<210> 1093
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1093
gggaaaaacc atccttaagg ctga 24
<210> 1094
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 1094
ccgccatttt tcaacttacc acttg 25
<210> 1095
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 1095
cgtggacaca cttcgggttt 20
<210> 1096
<211> 23
<212> DNA
<213> Rabbit calicivirus
<400> 1096
gggaaagcct acacaagctg tac 23
<210> 1097
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 1097
ccaaattgca gatttatcaa cggctt 26
<210> 1098
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 1098
tggccagttc tgaaaggact ttaatc 26
<210> 1099
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1099
gatctagtga atgctcagaa agacagtatg 30
<210> 1100
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1100
ctaacacaca gcattaaggt tacgtttaaa 30
<210> 1101
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1101
cgacactttc ctaattgctt ctttgtt 27
<210> 1102
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1102
cctggcatac ttgggaagct at 22
<210> 1103
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1103
gaaaatggga agcaatattt gacatagttc tt 32
<210> 1104
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1104
cttgagctct tgcaaccttg taag 24
<210> 1105
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1105
taaccttttt ggtgccaatg tgaaatg 27
<210> 1106
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1106
cttttagtaa agtgacttag gcaggctta 29
<210> 1107
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1107
actcagtatt ttaaacatct gtcagcttat gt 32
<210> 1108
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1108
gttttaagga tcttgagaga acatttattt cag 33
<210> 1109
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1109
aaaaacactt gaataagaat cagtagggta ta 32
<210> 1110
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1110
gtagtaatca acagaagtta ggagaacata aca 33
<210> 1111
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1111
gccctgtttc tgttttagta tgtaaatcc 29
<210> 1112
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1112
gtccttggct aacaactaga ttgaacta 28
<210> 1113
<211> 27
<212> DNA
<213> Rabbit calicivirus
<400> 1113
tttttcttcc tctccatgag ttgtgaa 27
<210> 1114
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 1114
ctttgcaaat gatcaatttt tgcgga 26
<210> 1115
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1115
catgcaaaga ttcaagtagt tttgcaataa 30
<210> 1116
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1116
ggccaaatca cattatatac actcactaca 30
<210> 1117
<211> 20
<212> DNA
<213> Rabbit calicivirus
<400> 1117
ttgtggtgag cgaagatcgt 20
<210> 1118
<211> 21
<212> DNA
<213> Rabbit calicivirus
<400> 1118
cagagtagct gcgactatgg g 21
<210> 1119
<211> 30
<212> DNA
<213> Rabbit calicivirus
<400> 1119
cccatctcta aataaatagg tcaaaccctt 30
<210> 1120
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1120
cctgtcattc tataactctg ttatgctga 29
<210> 1121
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1121
actcaaaggt gatgtaattt gtgcaaag 28
<210> 1122
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 1122
caattcctcc ttggttgaat ccatg 25
<210> 1123
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1123
agccaaaatt gtcatactgt tgttaagc 28
<210> 1124
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 1124
cttttgtcca ggctggcatc atata 25
<210> 1125
<211> 24
<212> DNA
<213> Rabbit calicivirus
<400> 1125
caagtgattc atctcccaaa gtgc 24
<210> 1126
<211> 25
<212> DNA
<213> Rabbit calicivirus
<400> 1126
ccttagataa aatcacacaa ggccg 25
<210> 1127
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1127
ctgaaaccct gtctgtacaa aaatacaaa 29
<210> 1128
<211> 28
<212> DNA
<213> Rabbit calicivirus
<400> 1128
taggcatatc tgcaaacttc agattcaa 28
<210> 1129
<211> 22
<212> DNA
<213> Rabbit calicivirus
<400> 1129
tgtgctgaag cagttgacaa gt 22
<210> 1130
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1130
cagctaatac cctgaaaaat caagaaattc aaa 33
<210> 1131
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1131
ggagctttct gtatataaat gtggagatta gag 33
<210> 1132
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1132
tacgctttca aaaatggcaa atcacttta 29
<210> 1133
<211> 33
<212> DNA
<213> Rabbit calicivirus
<400> 1133
gcatagaaca aaagatttgg aaagatatac acc 33
<210> 1134
<211> 29
<212> DNA
<213> Rabbit calicivirus
<400> 1134
actaaagctg agtgataagt agttttgca 29
<210> 1135
<211> 26
<212> DNA
<213> Rabbit calicivirus
<400> 1135
tgcagttttg gtttgatgta acaagg 26
<210> 1136
<211> 32
<212> DNA
<213> Rabbit calicivirus
<400> 1136
agtactctgt ctcaaaacat ttcacatgat ta 32

Claims (6)

1. a kind of kit for detecting relevant 411 mutational sites of primary Hemophagocytic Lymphohistiocytosis, It is characterized by:
The kit includes the reagent for detecting 411 mutational sites;
411 mutational sites be located at PRF1, UNC13D, STX11, STXBP2, SH2D1A, XIAP, ITK, CD27, MAGT1, RAB27A, LYST, AP3B1, BLOC1S6, TCN2, IL2RG totally 15 genes;
411 mutational sites are as follows:
The reagent includes the multiple PCR primer for expanding 411 above-mentioned mutational sites:
2. kit according to claim 1, which is characterized in that the kit further includes that genomic DNA is made For the reagent in the library of sequencing.
3. kit according to claim 1, which is characterized in that the kit further includes the examination for the sequencing of two generations Agent.
4. kit according to claim 1, which is characterized in that the kit further include dNTP, archaeal dna polymerase, Reagent, positive control and/or negative control for isolated or purified nucleic acid.
5. kit according to claim 4, which is characterized in that detection sample used is peripheral blood, marrow or entity Tissue samples.
6. kit according to claim 4, which is characterized in that detection sample used is peripheral blood.
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CN113138281A (en) * 2021-04-28 2021-07-20 首都医科大学附属北京友谊医院 Detection apparatus and electronic equipment for primary hemophagocytic syndrome
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