CN109517840A - Efficient transcriptional activation system in drosophila reproductive system - Google Patents
Efficient transcriptional activation system in drosophila reproductive system Download PDFInfo
- Publication number
- CN109517840A CN109517840A CN201811312144.5A CN201811312144A CN109517840A CN 109517840 A CN109517840 A CN 109517840A CN 201811312144 A CN201811312144 A CN 201811312144A CN 109517840 A CN109517840 A CN 109517840A
- Authority
- CN
- China
- Prior art keywords
- sequence
- coded sequence
- seq
- dcas9
- transcriptional activation
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
- C12N15/8509—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells for producing genetically modified animals, e.g. transgenic
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01K—ANIMAL HUSBANDRY; CARE OF BIRDS, FISHES, INSECTS; FISHING; REARING OR BREEDING ANIMALS, NOT OTHERWISE PROVIDED FOR; NEW BREEDS OF ANIMALS
- A01K67/00—Rearing or breeding animals, not otherwise provided for; New breeds of animals
- A01K67/033—Rearing or breeding invertebrates; New breeds of invertebrates
- A01K67/0333—Genetically modified invertebrates, e.g. transgenic, polyploid
- A01K67/0337—Genetically modified Arthropods
- A01K67/0339—Genetically modified insects, e.g. Drosophila melanogaster, medfly
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/113—Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/87—Introduction of foreign genetic material using processes not otherwise provided for, e.g. co-transformation
- C12N15/90—Stable introduction of foreign DNA into chromosome
- C12N15/902—Stable introduction of foreign DNA into chromosome using homologous recombination
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01K—ANIMAL HUSBANDRY; CARE OF BIRDS, FISHES, INSECTS; FISHING; REARING OR BREEDING ANIMALS, NOT OTHERWISE PROVIDED FOR; NEW BREEDS OF ANIMALS
- A01K2207/00—Modified animals
- A01K2207/15—Humanized animals
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01K—ANIMAL HUSBANDRY; CARE OF BIRDS, FISHES, INSECTS; FISHING; REARING OR BREEDING ANIMALS, NOT OTHERWISE PROVIDED FOR; NEW BREEDS OF ANIMALS
- A01K2217/00—Genetically modified animals
- A01K2217/07—Animals genetically altered by homologous recombination
- A01K2217/072—Animals genetically altered by homologous recombination maintaining or altering function, i.e. knock in
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01K—ANIMAL HUSBANDRY; CARE OF BIRDS, FISHES, INSECTS; FISHING; REARING OR BREEDING ANIMALS, NOT OTHERWISE PROVIDED FOR; NEW BREEDS OF ANIMALS
- A01K2227/00—Animals characterised by species
- A01K2227/70—Invertebrates
- A01K2227/706—Insects, e.g. Drosophila melanogaster, medfly
-
- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01K—ANIMAL HUSBANDRY; CARE OF BIRDS, FISHES, INSECTS; FISHING; REARING OR BREEDING ANIMALS, NOT OTHERWISE PROVIDED FOR; NEW BREEDS OF ANIMALS
- A01K2267/00—Animals characterised by purpose
- A01K2267/01—Animal expressing industrially exogenous proteins
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/10—Type of nucleic acid
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/10—Type of nucleic acid
- C12N2310/20—Type of nucleic acid involving clustered regularly interspaced short palindromic repeats [CRISPRs]
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- Zoology (AREA)
- Biomedical Technology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Wood Science & Technology (AREA)
- General Engineering & Computer Science (AREA)
- Organic Chemistry (AREA)
- Chemical & Material Sciences (AREA)
- Molecular Biology (AREA)
- Physics & Mathematics (AREA)
- Plant Pathology (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Environmental Sciences (AREA)
- Animal Behavior & Ethology (AREA)
- Animal Husbandry (AREA)
- Biodiversity & Conservation Biology (AREA)
- Veterinary Medicine (AREA)
- Mycology (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Peptides Or Proteins (AREA)
Abstract
The present invention relates to field of biotechnology, and in particular to a kind of transcriptional activation system and its application in drosophila reproductive system.The transcriptional activation system includes dCas9 protein expression element and sgRNA Expression element, contain p- transposase promoter, dCas9 albumen coded sequence, MCP albumen coded sequence and activating transcription factor coded sequence on the dCas9 protein expression element, the activating transcription factor coded sequence is located at the downstream of the dCas9 albumen coded sequence, and the MCP albumen coded sequence is located at the downstream of the dCas9 albumen coded sequence;Contain U6B promoter, sgRNA insertion point and MCP protein recognition sequences on the sgRNA Expression element.Transcriptional activation system provided by the invention, can in drosophila reproductive system activated gene expression, and activation efficiency is high.
Description
Technical field
The present invention relates to field of biotechnology, and in particular to a method of high efficiency regulatory gene expression in vivo,
More particularly to a kind of transcriptional activation system applied in drosophila reproductive system.
Background technique
As the genome plan of the species such as the mankind smoothly completes, function letter is converted by the sequence information of genome
Breath, decodes the password of life, is of great significance for processes such as growth and development, the disease agings of the comprehensive understanding mankind.Drosophila
As the one mode biology highly conserved with the mankind, have many advantages, such as, the research achievement in drosophila is also applied for the mankind
In, and the limitation of life ethics can be got rid of, therefore become the idealized model biology of biomedical research.In drosophila reproductive system
Highly conserved because having, the cell quantities such as germline stem cell and position are determining and are easy to mark and cell-cell interaction machine
The features such as system more understands, and become the ideal model for carrying out internal stem cell and reproductive development research.Regulate and control target gene
Expression is the most commonly seen technological means of life science, main by reducing gene function and enhancing gene function.In fruit
In fly reproductive system, the technological means for reducing gene function be have been relatively mature, mainly include transgenosis perturbation technique and
CRISPR/Cas9 gene editing technology etc., but the technological means for enhancing gene expression is also relatively limited, often limits correlative study
Carry out in a deep going way.
Existing technology depends on traditional Gal4/UAS system, by expressing the purpose base carried by foreign vector
Because of coded sequence.Although this mode can express target gene, clone's step of target gene in specific organization or organ
Rapid cumbersome, the period is longer, cannot simulate the expression pattern of gene itself and false positive results often occurs, and cannot mistake simultaneously
Multiple genes are expressed, cannot achieve extensive building and screening operation in genome range.And by existing CRISPR/Cas9
When transcriptional activation system is applied to reproductive system, controlling gene expression efficiency is limited.Therefore, in reproductive system gene swash
Living and high efficient expression also requires further improvement.
Summary of the invention
The present invention is directed to solve at least some of the technical problems in related technologies, the transcription of gene is improved
Activation efficiency.For this purpose, the present invention provides a kind of transcriptional activation system, using CRISPR/dCas9 System-mediated drosophila life
Efficiently activating genes of interest is grown in system, so that the regulation of gene is realized, to improve the efficiency of the transcriptional activation of gene, especially
Its efficiency that can be used to improve the transcriptional activation of gene in drosophila reproductive system.
The present inventor has found in the course of the research: the digestion activity position of Cas9 albumen in CRISPR/Cas9 system
(become dCas9) after point mutation, if the C-terminal in dCas9 merges activating transcription factor appropriate, in the effect of sgRNA
Under, the transcriptional activation in situ of target gene may be implemented.And the particularity of reproductive system expression is combined, to CRISPR/Cas9 system
System is transformed, can it is simple and quick it is efficient realize reproductive system in gene transcriptional activation and expression.
Therefore, the present invention is constructed for the deficiency for enhancing gene expression ways in reproductive system in existing drosophila
FlySAMG system is able to solve following problem as transcriptional activation system: 1, gene overexpression operates in drosophila reproductive system
Cumbersome problem;2, the problem of multiple genes cannot be activated in drosophila reproductive system simultaneously;3, swash in existing system reproductive system
The problem of gene low efficiency living;4, in drosophila reproductive system the transcriptional activation strain of genome range construction and screening problem.
Specifically, the present invention provides the following technical scheme that
According to the first aspect of the invention, the present invention provides a kind of transcriptional activation system, the transcriptional activation system packets
DCas9 protein expression element and sgRNA Expression element are included, is started on the dCas9 protein expression element containing p- transposase
Son, dCas9 albumen coded sequence, MCP albumen coded sequence and activating transcription factor coded sequence, the activating transcription factor
Coded sequence is located at the downstream of the dCas9 albumen coded sequence, and the MCP albumen coded sequence is located at the dCas9 albumen
The downstream of coded sequence;Position is inserted into containing U6B promoter, MCP protein recognition sequences and sgRNA on the sgRNA Expression element
Point.MCP (MS2coating protein) albumen coded sequence can encode MCP albumen, which can identify that sgRNA is expressed
MS2 structure on element, so that dCas9 protein expression element under the guidance of sgRNA Expression element, is identified and is integrated to
On target gene.And the activating transcription factor coded sequence contained on dCas9 protein expression element can encoding transcription activation because
Son, p- transposase promoter can start expression of the dCas9 protein expression element in reproductive system, to realize activation purpose
The target of the expression of gene.Transcriptional activation system provided by the invention using the transcriptional activation on dCas9 protein expression element because
The expression of sub- coded sequence and p- transposase promoter controlling gene in reproductive system, and using U6B as promoter regulation
SgRNA expression, so that the expression quantity of sgRNA is higher, to improve the activation efficiency of transcriptional activation system.SgRNA in the present invention
SgRNA insertion point and MCP protein recognition sequences are respectively positioned on the downstream of U6B promoter in Expression element.It is provided using the present invention
Transcriptional activation system, it is particularly possible to be applied to the transcriptional activation of gene in drosophila reproductive system, it is easy to operate, and swash
Work is more efficient, is convenient for the operation of extensive high throughput.
According to an embodiment of the invention, above-described transcriptional activation system may further include following technical characteristic:
In some embodiments of the invention, the activating transcription factor coded sequence is selected from VP64 coded sequence, P65 is compiled
Code at least one of sequence or HSF1 coded sequence.VP64 coded sequence can encode V64 albumen (herpes simplex virus egg
The tetramer of white matter VP16), P65 coded sequence can encode P65 albumen (NF-kB trans-activation subunit), HSF1 coded sequence
HSF1 albumen (the human heat shock factor 1) can be encoded, these albumen can be used as activating transcription factor, the table of activated gene
It reaches.
In some embodiments of the invention, the activating transcription factor coded sequence includes VP64 coded sequence, P65 volume
Code sequence and HSF1 coded sequence, the VP64 coded sequence are located at the upstream of the MCP albumen coded sequence, the VP64
Contain self cleavage peptide T2A coded sequence, the MCP albumen coded sequence between coded sequence and the MCP albumen coded sequence
Downstream be followed successively by the P65 coded sequence and the HSF1 coded sequence.DCas9 albumen coded sequence can encode dCas9
Albumen is had VP64 albumen in the C-terminal fusion of dCas9 albumen, and is further melted using self cleavage peptide T2A in the downstream of MCP albumen
Conjunction has P65 and HSF1 activating transcription factor.Self cleavage peptide T2A be it is a kind of can in translation skill self splicing small peptide,
Its enable to dCas9 protein expression element after generating whole mRNA can self cleavage at two independent parts, dCas9-
VP64 and MCP-P65-HSF1 can stablize the activation efficiency for improving transcriptional activation system.Herein, self cleavage peptide can also claim
For autothermic cracking peptide.
In some embodiments of the invention, the VP64 coded sequence is SEQ ID NO:21, the code sequence of the P65
It is classified as SEQ ID NO:26, the HSF1 coded sequence is SEQ ID NO:27, and the self cleavage peptide T2A coded sequence is SEQ
ID NO:23。
In some embodiments of the invention, the primer sequence for expanding the P65 coded sequence is SEQ ID NO:
24 and SEQ ID NO:25.
In some embodiments of the invention, the primer sequence for expanding the HSF1 coded sequence is SEQ ID NO:
27 and SEQ ID NO:28.
In some embodiments of the invention, the dCas9 protein expression element and the sgRNA Expression element pass through matter
Grain carrier connection.The dCas9 protein expression element and the sgRNA Expression element are connected on same plasmid vector.To
It can guarantee in organism while play a role.
In some embodiments of the invention, the plasmid vector is pNP plasmid.
In some embodiments of the invention, the MCP albumen coded sequence is SEQ ID NO:22.
In some embodiments of the invention, the MCP protein recognition sequences are MS2 sequence.
In some embodiments of the invention, further comprise: at least two gypsy genes, the gypsy gene difference
Positioned at the upstream of the dCas9 protein expression element and the sgRNA Expression element;Ftz intron sequences and K10polyA sequence
Column, the ftz intron sequences and the K10polyA sequence are located at the downstream of the dCas9 protein expression element.The present invention
Open gene system at least containing there are two gypsy gene, gypsy gene is located at dCas9 protein expression element and sgRNA
The both ends of Expression element are used to shield the interference and factor of insertion surrounding genes as insulator, to help two expression members
The high efficient expression of part.Ftz intron sequences are located at the downstream of dCas9 protein expression element, for enhancing translation.K10 polyA
The downstream that sequence is located at dCas9 protein expression element is conducive to the termination of regulatory transcription.In a specific embodiment,
K10polyA sequence is located at the downstream of the ftz intron sequences.
In some embodiments of the invention, the nucleic acid sequence of the gypsy gene is SEQ ID NO:5;In the ftz
It is SEQ ID NO:6 containing subsequence;The K10polyA sequence is SEQ ID NO:44.
In some embodiments of the invention, the transcriptional activation system further comprises: 10 × UAS sequence, 10 × UAS
Sequence is located at the upstream of the p- transposase promoter.Under its driving that may assist in tissue and organ specificity Gal4, in spy
Fixed histoorgan and stage of development realize the transcriptional activation of target gene.
In some embodiments of the invention, the transcriptional activation system further comprise antibiotic marker genes,
Vermilion gene and attB gene;Wherein marker gene of the vermilion gene as screening transgenic drosophila.AttB base
Because being used for the genome of transcriptional activation system site-directed integration to drosophila.Antibiotic marker genes, vermilion gene and
AttB gene is located at except gypsy gene, is used to help the construction and screening of transcriptional activation system in vivo, without influencing
The expression of dCas9 protein expression element and sgRNA Expression element.
In some embodiments of the invention, the antibiotic marker genes are ampicillin resistance gene, the ammonia
The nucleic acid sequence of parasiticin resistant gene is SEQ ID NO:7;The nucleic acid sequence of the vermilion gene is SEQ ID
NO:8;The nucleic acid sequence of the attB gene is SEQ ID NO:9.
In a kind of specific example of the invention, the transcriptional activation system includes: dCas9 protein expression element, described
DCas9 protein expression element includes p- transposase promoter and dCas9 albumen coded sequence, the dCas9 albumen coded sequence
Positioned at the downstream of the p- transposase promoter, the downstream of the dCas9 albumen coded sequence be followed successively by VP64 coded sequence, from
Shear peptide T2A coded sequence, MCP albumen coded sequence, P65 coded sequence and HSF1 coded sequence;SgRNA Expression element, institute
It states and contains U6B promoter, MS2 sequence and sgRNA insertion point on sgRNA Expression element;At least two gypsy genes, it is described
Gypsy gene is located at the upstream of the dCas9 protein expression element and the upstream of the sgRNA Expression element;Ftz is included
Subsequence, the ftz intron sequences are located at the downstream of the dCas9 protein expression element;K10polyA sequence, it is described
K10polyA sequence is located at the downstream of the ftz intron sequences;Antibiotic marker genes, vermilion gene and attB base
Cause.On this basis, the transcriptional activation system can further include 10 × UAS sequence, and 10 × UAS sequence is located at
The upstream of the p- transposase promoter.
In a kind of specific example of the invention, the transcriptional activation system is as shown in Figure 1.
According to the second aspect of the invention, the present invention provides a kind of method for constructing transcriptional activation system, the transcriptions
Activation system is the transcriptional activation system according to first aspect present invention, which comprises
(1) include using plamid vector construction dCas9 albumen coded sequence the first recombinant plasmid;
(2) activating transcription factor coded sequence is connected on first recombinant plasmid, building obtains the second recombination matter
Grain, wherein the activating transcription factor coded sequence is located at the downstream of the dCas9 albumen coded sequence;
(3) sgRNA Expression element is connected on second recombinant plasmid, building obtains transcriptional activation system.
According to an embodiment of the invention, the method for building transcriptional activation system described above may further include following skill
Art feature:
In some embodiments of the invention, step (1) further comprises:
Cas9 albumen coded sequence is connected on plasmid vector by (1-1), and building obtains including Cas9 encoding histone sequence
The third recombinant plasmid of column;
(1-2) is mutated the Cas9 albumen coded sequence on the third recombinant plasmid, obtains comprising
State the first recombinant plasmid of dCas9 albumen coded sequence.
In some embodiments of the invention, the plasmid vector is pNP plasmid.
In some embodiments of the invention, the primer sequence for expanding the Cas9 albumen coded sequence is SEQ ID
NO:1 and SEQ ID NO:2, the Cas9 albumen coded sequence are SEQ ID NO:19.
In some embodiments of the invention, step (1-1) is by way of homologous recombination by the Cas9 encoding histone
Sequence is connected on the plasmid vector.
In some embodiments of the invention, in step (1-2) using reverse complemental mutant primer SEQ ID NO:11 and
SEQ ID NO:12 is mutated the base that the 10th amino acids are encoded on the Cas9 albumen coded sequence, utilizes reverse mutual
Mutant primer SEQ ID NO:13 and SEQ ID NO:14 is mended to the alkali of the 840th amino acids in the Cas9 albumen coded sequence
Base is mutated.
In some embodiments of the invention, in step (2) by way of homologous recombination by the activating transcription factor
Coded sequence is connected on first recombinant plasmid;
In some embodiments of the invention, sgRNA Expression element is connected by way of homologous recombination in step (3)
Onto second recombinant plasmid.
In some embodiments of the invention, non-containing stent sequence and U6B promoter 3 ' on the sgRNA Expression element
Region sequence is translated, contains MCP protein recognition sequences in the stent sequence.
In some embodiments of the invention, the stent sequence is SEQ ID NO:34, the sequence of the U6B promoter
For SEQ ID NO:36,3 ' the non-translational region sequence of U6B promoter is SEQ ID NO:37.
According to the third aspect of the invention we, the present invention provides a kind of methods of prepare transgenosis drosophila, comprising:
(a) the sgRNA sequence for targeting target gene is imported into transcription described in first aspect present invention any embodiment
In activation system, the transcriptional activation system of targeting target gene is obtained;
(b) the transcriptional activation system introducing containing targeting target gene is obtained into transgenosis fruit into drosophila embryos
Fly.
In some embodiments of the invention, step (a) further comprises: (a-1) carries out the transcriptional activation system
Digestion processing, obtains the transcriptional activation system by digestion processing;(a-2) by the targeting target gene after annealed pairs
SgRNA sequence is connected in the sgRNA insertion point of the transcriptional activation system by digestion processing, so as to will be described
The sgRNA sequence of targeting target gene is imported into the transcriptional activation system.
According to the fourth aspect of the invention, the present invention provides a kind of sides of gene expression in activation drosophila reproductive system
Method, comprising: the sgRNA sequence for targeting target gene is imported into transcriptional activation system, obtains the transcription of targeting target gene
Activation system, the transcriptional activation system are the transcriptional activation system according to first aspect present invention;By the targeting mesh
The transcriptional activation system introducing of gene is marked into drosophila embryos, obtains transgenic fly;By the transgenic fly and Gal4 work
Have drosophila hybrid culture, drosophila offspring is obtained, to activate the expression of target gene in drosophila reproductive system.
It is obtained by the present invention to have the beneficial effect that the method for the invention for preparing transcriptional activation system is easy to operate;The present invention
Provided transcriptional activation system activation efficiency is high;Multiple genes can be activated simultaneously;It is convenient for the operation of extensive high throughput.
Detailed description of the invention
Fig. 1 is the schematic diagram of the transcriptional activation system flySAMG constructed according to one embodiment of present invention.
Fig. 2 is the schematic diagram of the drosophila ovary germarium constructed according to one embodiment of present invention, and wherein A is represented
Drosophila ovary germarium (control represents control) is compareed, B represents the drosophila ovary germarium (dpp of dpp gene transcriptional activation
Activation represents dpp gene activation), C represents the drosophila ovary germarium (tkv of tkv gene transcriptional activation
Activation represents tkv gene activation), D represents the drosophila ovary germarium (bam of bam gene transcriptional activation
Activation represents bam gene activation).
Specific embodiment
The embodiment of the present invention is described below in detail, examples of the embodiments are shown in the accompanying drawings, wherein from beginning to end
Same or similar label indicates same or similar element or element with the same or similar functions.Below with reference to attached
The embodiment of figure description is exemplary, it is intended to is used to explain the present invention, and is not considered as limiting the invention.
Herein, term " transcriptional activation system " can also be expressed as " transcriptional activation carrier ", it is intended that being capable of activated gene
The carrier or system or component of transcription.
Herein, term " coded sequence " refers to encode the sequence of one section of protein product, also refers to express
The DNA nucleic acid sequence of one section of protein product also also refers to the RNA nucleic acid sequence of one section of protein product of expression.
DCas9 protein expression element described herein refers to the Expression element of expression dCas9 albumen, the sgRNA table
Refer to that the Expression element that sgRNA is inserted into containing sgRNA insertion point, " Expression element " refer to make up to element
The unit of corresponding function is played for a functional unit.DCas9 protein expression element can refer to expression dCas9 albumen
Nucleic acid sequence, sgRNA Expression element can refer to the nucleic acid sequence of the sgRNA sequence of insertion targeting target gene.Wherein, institute
DCas9 albumen is stated compared with Cas9 albumen, does not have nuclease, but still can identify specific sgRNA
(single-guide RNA), still is able in conjunction with specific DNA sequence dna.According to an embodiment of the invention, the dCas9
Albumen is compared with Cas9 albumen, and the 10th amino acid sports A by D, and the 840th amino acid sports A by H.
Herein, when describe nucleic acid sequence between positional relationship when, form of presentation " upstream " " downstream " refer to according to
The sequence of duplication or the transcription of nucleic acid sequence, the nucleic acid sequence positioned at upstream are located at downstream closer to 5 ' ends of Expression element
Nucleic acid sequence closer to Expression element 3 ' end.The relationship in this " upstream " " downstream " corresponds respectively to expressed albumen
N-terminal and C-terminal.It should be noted that this " upstream " " downstream " relationship does not necessarily imply that between two nucleic acid sequences directly
It is connected, which only represents a kind of relative positional relationship.It completely can be between " upstream " and the nucleic acid sequence in " downstream "
Other nucleic acid sequences are inserted into, as long as other nucleic acid sequences of the insertion have no effect on the row for being inserted into the function of nucleic acid sequence
Make and expresses.
Herein, when describing the connection relationship of two nucleic acid sequences, unless " being connected directly " refers to two nucleic acid sequences
Directly it is connected by 3 ' -5 ' phosphodiester bonds between column, and other nucleic acid sequences cannot be inserted into." connected " not necessarily refer to two
Nucleic acid sequence cannot be inserted between a nucleic acid sequence, as long as other nucleic acid sequences of the insertion do not influence to be inserted into nucleic acid sequence
Function enforcement and expression.
Different nucleic acid sequences shown herein, such as VP64 coded sequence (SEQ ID NO:21), P65 coded sequence
(SEQ ID NO:26), gypsy gene order (SEQ ID NO:5), as just being capable of preferable example, it is intended that can express
Corresponding albumen or the nucleic acid sequence for playing corresponding function.Those skilled in the art can according to need, and carry out to nucleic acid sequence
These replacements of corresponding function or partial replacement are perhaps played as long as replacing perhaps partial replacement and can express corresponding albumen
It is also contained in protection scope of the present invention.Nucleic acid sequence is shown according to the sequence at the end of sequence 5 ' to 3 ' ends generally in the art
Out.
CRISPR/Cas9 system is current most popular gene editing system, and Cas9 albumen is under the guidance of sgRNA
Target gene can be specifically identified and be cut, realizes precisely efficient gene editing.By the digestion activity site of Cas9 albumen
After being mutated (dCas9), dCas9 still can be identified and binding purpose gene under the guidance of sgRNA, but not into
Row cutting.If the C-terminal in dCas9 albumen merges transcriptional activation domain appropriate, so that it may realize the original position of target gene
Transcriptional activation.
The solution of the present invention is explained below in conjunction with embodiment.It will be understood to those of skill in the art that following
Embodiment is merely to illustrate the present invention, and should not be taken as limiting the scope of the invention.Particular technique or item are not specified in embodiment
Part, it described technology or conditions or is carried out according to the literature in the art according to product description.Agents useful for same or instrument
Production firm person is not specified in device, and being can be with conventional products that are commercially available.
In the examples below, during constructing dCas9 protein expression element and sgRNA Expression element, Wo Menjun
Obtain purpose dCas9 protein expression element and sgRNA Expression element by means of plasmid vector, therefore in described below
What dCas9 protein carrier and sgRNA carrier indicated is to prepare the mistake in dCas9 protein expression element and sgRNA Expression element
Journey object.
In the course of the research, we express the activator protein dCas9-VP64 of two fusions using self cleavage peptide T2A simultaneously
And MCP-p65-HSF1, and expressed in the promoter promoter downstream p-transposase.Because U6B promoter has more
High activity, so we control the expression of sgRNA2.0 using U6B promoter.There are two contain MS2 for tool on sgRNA2.0
The loop-stem structure of point, specifically can be identified and be combined by MCP albumen, and realizes and recruit MCP-p65-HSF1 activating transcription factor
Purpose.Therefore, the transcriptional activation activity of tri- transcription factors of VP64, p65 and HSF1 is combined in the system.Use process
In, we are by the vector integration of the carrier of sgRNA2.0 and expression dCas9-VP64-T2A-MCP-p65-HSF1 at a carrier
FlySAMG, and gypsy sequence is inserted respectively in the upstream of dCas9activator and the downstream of sgRNA2.0, to reduce
Influence of other sequential elements to expressions of both, and enhance the transcription of gene.It can be convenient land productivity in such a way that digestion connects
Multiple sgRNA are expressed simultaneously with this system, realize while activating the purpose of multiple target gene.In addition, in flySAMG carrier
Further include the ampicillin resistance gene for screening positive plasmid, selects the genetic screening label of purpose transgenic fly
(vermilion gene) helps the attB sequence for constructing fixed point transgenic fly, helps dCas9activator transcription and turns over
The ftz sequence and K10polyA sequence translated.
The application is using Gal4/UAS binary expression system, the expression of activating genes of interest in drosophila reproductive system,
10 × UAS sequence is contained in the upstream of p-transposase promoter promoter, in this way tissue and organ specificity Gal4's
It, can be in the transcriptional activation of specific histoorgan and stage of development realization target gene under driving.Only need turning for flySAMG
After the single-cross of gene drosophila and specific Gal4 tool drosophila, so that it may realize that the transcription of target gene in offspring drosophila swashs
It is living.
Embodiment one
CRISPR/Cas9 system is current most popular gene editing system, and Cas9 albumen is under the guidance of sgRNA
The specific position of genome can be cut, but after the digestion activity site of Cas9 albumen is mutated, institute's shape
At dCas9 still can identify under the guidance of sgRNA and simultaneously combine specific gene, but genome not cut.
As a result, through dCas9 in conjunction with specific DNA sequence dna, and recruit the activating transcription factor for capableing of activated gene expression, Ke Yiyong
To study the transcript and expression situation of gene expression.
The method for preparing dCas9 albumen is present embodiments provided, is included the following steps:
1, the clone of Cas9 albumen coded sequence
Reference literature Ren X, Sun J, Housden B E, et al.Optimized gene editing
technology for Drosophila melanogaster using germ line-specific Cas9[J]
.Proceedings of the National Academy of Sciences of the United States of
America, 2013,110 (47): the record of 19012-7. passes through PCR amplification using the non-cas9 carrier recorded in document
Cas9 albumen coded sequence is obtained, wherein the primer utilized is respectively
NLS-Cas9-F(SEQ ID NO:1):
5’-AGAAGCGGAAGGTCGGTATCCACGGTGTCCCAGCAGCCATGGACAAGAAGTAC TCCATTGGGCT-
3’
NLS-Cas9-R(SEQ ID NO:2):
5’-TCTTAGCTTGACCAGCTTTCTTAGTAGCAGCAGGACGCTTGTCTCCACCGAGCT GAGAGAGG-3’
Cas9 albumen coded sequence is obtained using primer amplification as above, obtained Cas9 albumen coded sequence still has
The activity of nucleic acid shearing enzyme.
2, plasmid vector skeleton is cloned
The plasmid backbone of flySAMG carrier is from pNP vector modification.Wherein, articles of reference " An efficient
and multiple target transgenic RNAi technique with low toxicity in
Drosophila, Nature Communications 9, Article number:4160 (2018) " obtains pNP carrier.With
The mode of PCR clones the segment needed on pNP carrier, used PCR primer are as follows:
NLS-pNP-F1(SEQ ID NO:3):
5’-GAAAGCTGGTCAAGCTAAGAAAAAGAAAAATTGTTGGCATCAGGTAGGCATCA CA-3’
pNP-NLS-R1(SEQ ID NO:4):
5’-GATACCGACCTTCCGCTTCTTCTTTGGGGCCATGGTGGCGgtaccTCTAGACTTTG
GTATGCGTCTTGTGATTCAAAG-3’
In amplified production obtained containing gypsy gene, ftz intron sequences, ampicillin resistance gene,
Vermilion gene, attB gene, SV40polyA sequence and 10 × UAS sequence, shown below gypsy gene, ftz
Intron sequences, ampicillin resistance gene, vermilion gene, attB gene and 10 × UAS sequence and DSCP starting
Subsequence, and SV40polyA sequence and DSCP promoter sequence are replaced in subsequent processing, therefore are not shown.
Gypsy gene order (SEQ ID NO:5) is as follows:
TTGGCCACGTAATAAGTGTGCGTTGAATTTATTCGCAAAAACATTGCATATTTTCGG CAAAGTAAAA
TTTTGTTGCATACCTTATCAAAAAATAAGTGCTGCATACTTTTTAGAGA AACCAAATAATTTTTTATTGCATACC
CGTTTTTAATAAAATACATTGCATACCCTCTTTTA ATAAAAAATATTGCATACTTTGACGAAACAAATTTTCGTT
GCATACCCAATAAAAGATT ATTATATTGCATACCCGTTTTTAATAAAATACATTGCATACCCTCTTTTAATAAAG
AATAT TGCATACGTTGACGAAACAAATTTTCGTTGCATACCCAATAAAAGATTATTATATTGCAT ACCTTTTCT
TGCCATACCATTTAGCCGATCAATTCTGCTCGGCAACAGTATATTTGTGGT GTGCCAACCAACAAC
Ftz intron sequences (SEQ ID NO:6) are as follows:
CTAGTTCTGATCTGCTAGACAATTGTTGGCATCAGGTAGGCATCACACACGATTAA CAACCCCTAAA
AATACACTTTGAAAATATTGAAAATATGTTTTTGTATACATTTTTGATA TTTTCAAATAATACGCAGTTATAAAA
CTCATTAGCTAACCCATTTTTTCTTTGCTTATGC TTACAGATTGCAAAGAACTAGAG
Phenalgin penicillin resistance sequence (SEQ ID NO:7) is as follows:
ATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTTTTGCGGCATTTTGCCTT CCTGTTTTTG
CTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCAGTTG GGTGCACGAGTGGGTTACATCGAACTGG
ATCTCAACAGCGGTAAGATCCTTGAGAGT TTTCGCCCCGAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTC
TGCTATGTGGCG CGGTATTATCCCGTGTTGACGCCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTC TCAG
AATGACTTGGTTGAGTACTCACCAGTCACAGAAAAGCATCTTACGGATGGCATG ACAGTAAGAGAATTATGCAGT
GCTGCCATAACCATGAGTGATAACACTGCGGCCAACT TACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACC
GCTTTTTTGCACAACATGG GGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCA
AA CGACGAGCGTGACACCACGATGCCTGTAGCAATGGCAACAACGTTGCGCAAACTATT AACTGGCGAACTACT
TACTCTAGCTTCCCGGCAACAATTAATAGACTGGATGGAGGCG GATAAAGTTGCAGGACCACTTCTGCGCTCGGC
CCTTCCGGCTGGCTGGTTTATTGCTG ATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACT
GGGGCCAGA TGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGAT GAACGAA
ATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAA
Vermilion gene order (SEQ ID NO:8) is as follows:
ATTTATTTTGTTATGTTATATGTATTATATGTCAGACATAAAGAAAAGGAACACATCA AATGTGATA
ACAAAGACTAAACAAGTAATTTTATTACACCAAAACGACAAAACAGTAG GCAGAACAAACAACGCATAGCCAAAC
ATTGACGAATTGGATACCCTGCCGATTGTCA GACACTTTTGTTGATCAGTTTCTTGCGAATGGTCTCGTCCAGCG
GTGGAATCGCCTCG CGGGGAATCAGAAAAGTGGACAGATTGAACAGATCCAGAAACACCTTGTACCGATCA CTG
AAACCAAAAAAAAACAAAGGGAGAACAGTTTGAGTTCATTGATCCCCGATATAA TCACATCTGCGATGATCACCT
GAGAGTGGAGCGCAGATATTGATAACCAGACGAGCCA CCAGTGCCCAACTGTTGCGATCCAATCATGCGTTGCAC
CATGATCACGTGATTGTCTGC GGCGGGAATAGAAAGTATTTGGTTAGGAAAACCAGTCTTAAACATAAGATATAT
TTATA AAAGAGTATCAAAGAATGCAATACTTACATCTCCACTTGGTTATTAACGAGTCGATGTC CATGAGCAGG
GTGAGCAACTGGTGTGGTTGGCTGAACCTGGGTTCATCCCTATAGAA GGTGATCATGATGGCTCCCTGAAGGGCA
CGATGGCTAAACCGGCGATCCCCACGACG CACCAGTGCATCGTGCACTGCCGGATCAAAGATGGAGCGATACACC
TCGCGTCGCTTC TCAATGTCCATGAGGCGGTAGTTTTTCGCCTTCTCCACGGGCTCCTCCATGGCGCTCTG TAC
CTGCGCCTCCAGGAATCGATCGACGCTCTCCTGAAACTTGGCCCAGAAGTTGAA GCCACTCTCCTCCAGTCCGGG
CGTCCTCTCCAGCCATCGCTGCACTAGCTCCAGTAGC GAGGGATCTTTCTCCGAGTTGCGAATCGAGTTCCGCGC
CTCCTCGTCGCTAAAGACAT CCGAGTACTTCTGGTTGTATCTCACCCGCTGCTCTGTCAGAACTCCCAGCTTGTT
CTCG ATCAAACGGAACTGCAGCGACTGAAAACCAGATGCGGGTGCCAGGTACTTGCGGAA GTCCATGAAGTCTA
GCGGGGTCATGGTCTCCAGAATGGGCACTTGGTCCACCAGGAG CTGTACAAAGGAAGTTATAAACGGATTTTGGT
AAGAGATTCAGAAAGCACTCACTTTT AGAATCAGAACCACTCGGTTCAGTCGCTTGACAATCTCCAGCGTCTTGG
TTTCATCGA TGACCTCTGCATCCAACATGTCTCGTATGGAGTCGAACTCAAAGATGATCTGCTTGAA CCAAAGC
TCGTAGGCTGTGGCGAAGGTACTTAAATGCCATTGAGTGTTGTCATCAAAG TTGTAAACCTACTCACCCTGGTGC
GTGATGATGAACAGATGCTCATCGTGCACGGGTC GCTTGTCCTCCTCGGACAGCATACACTGGGCATCCAGCAGT
TTGTCCAGCATCAGATA CTCTCCATAGATTTTGCCCACTTCCGTGGTTAATGGCACCGCCGAATCATCGTGATCGT
TTCTGTATGGGTTTGAATTGAATCGCAGAACTGAAGATCGATTGGCATTCCTGGACAG CACGTGCTGGTGCTCAC
CCGTTTCCTGCATAGGGACAGCTCATGGTGCACAGCTCAGA TCAGATCGTGACTCCTCGACCGGCGGATGCTGGC
GAACTGATCTCCGCCAGCGGACC GGAGATGAGACCCCAGCGAACCGATAACAGAGCGAGAGAGCTCCAGTTCCGA
CTGAT TGCACAGTCGGTGATCTGGGCGATGGGCACTGCCAGATAGGCTGGGAATTATCAATCA
CTTGAGGTGAAAGTGCGGCGCACACAAAT
AttB sequence (SEQ ID NO:9) is as follows:
GCTGCATCCAACGCGTTGGGAGCTCTCCGGATCAATTCGGCTTCACGTACCGTCG ACGATGTAGGTC
ACGGTCTCGAAGCCGCGGTGCGGGTGCCAGGGCGTGCCCTTGGGC TCCCCGGGCGCGTACTCCACCTCACCCATC
TGGTCCATCATGATGAACGGGTCGAGGT GGCGGTAGTTGATCCCGGCGAACGCGCGGCGCACCGGGAAGCCCTCG
CCCTCGAAAC CGCTGGGCGCGGTGGTCACGGTGAGCACGGGACGTGCGACGGCGTCGGCTGGTGCG GATACGCG
GGGCAGCGTCAGCGGGTTCTCGACGGTCACGGCGGGCATGTCGACAAGC CGAATTGATCCACTAGAAGGCCTAATT
C
10 × UAS (SEQ ID NO:10):
GCAGGTCGGAGTACTGTCCTCCGAGCGGAGTACTGTCCTCCGAGCGGAGTACTGT CCTCCGAGCGGA
GTACTGTCCTCCGAGCGGAGTACTGTCCTCCGAGCGGAGACTCCC GCGGTCGGAGTACTGTCCTCCGAGCGGAGT
ACTGTCCTCCGAGCGGAGTACTGTCCTC CGAGCGGAGTAC
3, the building of pNP-dCas9
The product that step 1 and step 2 obtain is attached by way of homologous recombination, product converts Escherichia coli
DH5 α, selects positive colony, and correct plasmid is sequenced and is denoted as pNP-Cas9.
The nuclease shear active of Cas9 depends on two structural domains: RuvC and HNH, the two structural domains are each responsible for cutting
Two chains of DNA chain are cut, and the two structural domains can be inactivated individually by artificial point mutation.By will be in Cas9 albumen
10th D (i.e. aspartic acid, Asp) sports A (i.e. alanine, Ala), and the Cas9D10A mutant of acquisition is shown as
RuvC inactivation, HNH still behave as activity;By the way that the H (i.e. histidine, His) of the 840th in Cas9 albumen is sported A,
The Cas9H840A mutant of acquisition shows as HNH inactivation, and RuvC is still active, and the Cas9 of both mutant still has
There is the activity of nuclease, shear action can be played to targeting sequence.When RuvC and HNH is in inactivated state simultaneously, Cas9
To not have nuclease, and become dCas9 (dead Cas9).
The D of the part the tenth of pNP-Cas9 plasmid expression Cas9 albumen is mutated into A in the following manner as a result, the
840 H are mutated into A to form the dCas9 of no digestion activity.
Using pNP-Cas9 as template, PCR amplification is carried out with the mutant primer of a pair of of reverse complemental.PCR product Dpn I enzyme
Bacillus coli DH 5 alpha is directly converted after cutting, monoclonal is selected and shakes bacterium, is extracted plasmid order-checking and is identified to obtain correct mutant plasmid.Institute
The primer used is respectively as follows:
D10A-F (SEQ ID NO:11):
5’-GAAGTACTCCATTGGGCTCGcTATCGGCACAAACAGCGTC-3’
D10A-R (SEQ ID NO:12):
5’-GACGCTGTTTGTGCCGATAgCGAGCCCAATGGAGTACTTC-3’
H840A-F (SEQ ID NO:13):
5’-TCCGACTACGACGTGGATgcTATCGTGCCCCAGTCTTTTC-3’
H840A-R (SEQ ID NO:14):
5’-GAAAAGACTGGGGCACGATAgcATCCACGTCGTAGTCGGA-3’
With two BbsI restriction enzyme sites (BbsI 1703 and BbsI in the above identical mutational formats mutation Cas9
2149), so as to subsequent application, obtained carrier is named as pNP-dCas9.Used primer is respectively as follows:
BbsI-dCas9-1-F (SEQ ID NO:15):
5’-ACCGTGAAACAGCTCAAAGAgGACTATTTCAAAAAGATTG-3’
BbsI-dCas9-1-R (SEQ ID NO:16):
5’-CAATCTTTTTGAAATAGTCcTCTTTGAGCTGTTTCACGGT-3’
BbsI-dCas9-2-F (SEQ ID NO:17):
5’-TTCTGGCCAGGGGGACAGTCTgCACGAGCACATCGCTAAT-3’
BbsI-dCas9-2-R (SEQ ID NO:18):
5’-ATTAGCGATGTGCTCGTGcAGACTGTCCCCCTGGCCAGAA-3’
Wherein, the dCas9 coded sequence in pNP-dCas9 carrier obtained (SEQ ID NO:19) is as follows:
ATGGCCCCAAAGAAGAAGCGGAAGGTCGGTATCCACGGTGTCCCAGCAGCCATG GACAAGAAGTACT
CCATTGGGCTCGCTATCGGCACAAACAGCGTCGGCTGGGCCGTC ATTACGGACGAGTACAAGGTGCCGAGCAAAA
AATTCAAAGTTCTGGGCAATACCGAT CGCCACAGCATAAAGAAGAACCTCATTGGCGCCCTCCTGTTCGACTCCG
GGGAGACG GCCGAAGCCACGCGGCTCAAAAGAACAGCACGGCGCAGATATACCCGCAGAAAGAA TCGGATCTGC
TACCTGCAGGAGATCTTTAGTAATGAGATGGCTAAGGTGGATGACTCTT TCTTCCATAGGCTGGAGGAGTCCTTT
TTGGTGGAGGAGGATAAAAAGCACGAGCGCC ACCCAATCTTTGGCAATATCGTGGACGAGGTGGCGTACCATGAA
AAGTACCCAACCAT ATATCATCTGAGGAAGAAGCTTGTAGACAGTACTGATAAGGCTGACTTGCGGTTGATC TA
TCTCGCGCTGGCGCATATGATCAAATTTCGGGGACACTTCCTCATCGAGGGGGACC TGAACCCAGACAACAGCGA
TGTCGACAAACTCTTTATCCAACTGGTTCAGACTTACAA TCAGCTTTTCGAAGAGAACCCGATCAACGCATCCGG
AGTTGACGCCAAAGCAATCCT GAGCGCTAGGCTGTCCAAATCCCGGCGGCTCGAAAACCTCATCGCACAGCTCCC
TGG GGAGAAGAAGAACGGCCTGTTTGGTAATCTTATCGCCCTGTCACTCGGGCTGACCCCC AACTTTAAATCTA
ACTTCGACCTGGCCGAAGATGCCAAGCTTCAACTGAGCAAAGAC ACCTACGATGATGATCTCGACAATCTGCTGG
CCCAGATCGGCGACCAGTACGCAGACC TTTTTTTGGCGGCAAAGAACCTGTCAGACGCCATTCTGCTGAGTGATA
TTCTGCGAGT GAACACGGAGATCACCAAAGCTCCGCTGAGCGCTAGTATGATCAAGCGCTATGATGAG CACCAC
CAAGACTTGACTTTGCTGAAGGCCCTTGTCAGACAGCAACTGCCTGAGAAG TACAAGGAAATTTTCTTCGATCAG
TCTAAAAATGGCTACGCCGGATACATTGACGGCG GAGCAAGCCAGGAGGAATTTTACAAATTTATTAAGCCCATC
TTGGAAAAAATGGACGG CACCGAGGAGCTGCTGGTAAAGCTTAACAGAGAAGATCTGTTGCGCAAACAGCGCAC
TTTCGACAATGGAAGCATCCCCCACCAGATTCACCTGGGCGAACTGCACGCTATACTC AGGCGGCAAGAGGATTT
CTACCCCTTTTTGAAAGATAACAGGGAAAAGATTGAGAAA ATCCTCACATTTCGGATACCCTACTATGTAGGCCC
CCTCGCCCGGGGAAATTCCAGATT CGCGTGGATGACTCGCAAATCAGAAGAGACCATCACTCCCTGGAACTTCGA
GGAAGT CGTGGATAAGGGGGCCTCTGCCCAGTCCTTCATCGAAAGGATGACTAACTTTGATAAA AATCTGCCTA
ACGAAAAGGTGCTTCCTAAACACTCTCTGCTGTACGAGTACTTCACAG TTTATAACGAGCTCACCAAGGTCAAAT
ACGTCACAGAAGGGATGAGAAAGCCAGCAT TCCTGTCTGGAGAGCAGAAGAAAGCTATCGTGGACCTCCTCTTCA
AGACGAACCGGA AAGTTACCGTGAAACAGCTCAAAGAGGACTATTTCAAAAAGATTGAATGTTTCGACTC TGTT
GAAATCAGCGGAGTGGAGGATCGCTTCAACGCATCCCTGGGAACGTATCACGAT CTCCTGAAAATCATTAAAGAC
AAGGACTTCCTGGACAATGAGGAGAACGAGGACATT CTTGAGGACATTGTCCTCACCCTTACGTTGTTTGAAGAT
AGGGAGATGATTGAAGAAC GCTTGAAAACTTACGCTCATCTCTTCGACGACAAAGTCATGAAACAGCTCAAGAGGC
GCCGATATACAGGATGGGGGCGGCTGTCAAGAAAACTGATCAATGGGATCCGAGACA AGCAGAGTGGAAAGACAA
TCCTGGATTTTCTTAAGTCCGATGGATTTGCCAACCGGAA CTTCATGCAGTTGATCCATGATGACTCTCTCACCT
TTAAGGAGGACATCCAGAAAGCA CAAGTTTCTGGCCAGGGGGACAGTCTGCACGAGCACATCGCTAATCTTGCAG
GTAGC CCAGCTATCAAAAAGGGAATACTGCAGACCGTTAAGGTCGTGGATGAACTCGTCAAA GTAATGGGAAGG
CATAAGCCCGAGAATATCGTTATCGAGATGGCCCGAGAGAACCAA ACTACCCAGAAGGGACAGAAGAACAGTAGG
GAAAGGATGAAGAGGATTGAAGAGGG TATAAAAGAACTGGGGTCCCAAATCCTTAAGGAACACCCAGTTGAAAAC
ACCCAGCT TCAGAATGAGAAGCTCTACCTGTACTACCTGCAGAACGGCAGGGACATGTACGTGGAT CAGGAACT
GGACATCAATCGGCTCTCCGACTACGACGTGGATGCTATCGTGCCCCAGT CTTTTCTCAAAGATGATTCTATTGA
TAATAAAGTGTTGACAAGATCCGATAAAAATAGA GGGAAGAGTGATAACGTCCCCTCAGAAGAAGTTGTCAAGAA
AATGAAAAATTATTGG CGGCAGCTGCTGAACGCCAAACTGATCACACAACGGAAGTTCGATAATCTGACTAAG G
CTGAACGAGGTGGCCTGTCTGAGTTGGATAAAGCAGGCTTCATCAAAAGGCAGCTT GTTGAGACACGCCAGATCA
CCAAGCACGTGGCCCAAATTCTCGATTCACGCATGAAC ACCAAGTACGATGAAAATGACAAACTGATTCGAGAGG
TGAAAGTTATTACTCTGAAGT CTAAGCTGGTCTCAGATTTCAGAAAGGACTTTCAGTTTTATAAGGTGAGAGAGA
TCAA CAATTACCACCATGCGCATGATGCCTACCTGAATGCAGTGGTAGGCACTGCACTTATCA AAAAATATCCC
AAGCTTGAATCTGAATTTGTTTACGGAGACTATAAAGTGTACGATGTT AGGAAAATGATCGCAAAGTCTGAGCAG
GAAATAGGCAAGGCCACCGCTAAGTACTTC TTTTACAGCAATATTATGAATTTTTTCAAGACCGAGATTACACTG
GCCAATGGAGAGAT TCGGAAGCGACCACTTATCGAAACAAACGGAGAAACAGGAGAAATCGTGTGGGACA AGGG
TAGGGATTTCGCGACAGTCCGGAAGGTCCTGTCCATGCCGCAGGTGAACATCG TTAAAAAGACCGAAGTACAGAC
CGGAGGCTTCTCCAAGGAAAGTATCCTCCCGAAAA GGAACAGCGACAAGCTGATCGCACGCAAAAAAGATTGGGA
CCCCAAGAAATACGGC GGATTCGATTCTCCTACAGTCGCTTACAGTGTACTGGTTGTGGCCAAAGTGGAGAAAG
GGAAGTCTAAAAAACTCAAAAGCGTCAAGGAACTGCTGGGCATCACAATCATGGAGC GATCAAGCTTCGAAAAAA
ACCCCATCGACTTTCTCGAGGCGAAAGGATATAAAGAGG TCAAAAAAGACCTCATCATTAAGCTTCCCAAGTACT
CTCTCTTTGAGCTTGAAAACGG CCGGAAACGAATGCTCGCTAGTGCGGGCGAGCTGCAGAAAGGTAACGAGCTGG
CAC TGCCCTCTAAATACGTTAATTTCTTGTATCTGGCCAGCCACTATGAAAAGCTCAAAGGG TCTCCCGAAGAT
AATGAGCAGAAGCAGCTGTTCGTGGAACAACACAAACACTACCTT GATGAGATCATCGAGCAAATAAGCGAATTC
TCCAAAAGAGTGATCCTCGCCGACGCTA ACCTCGATAAGGTGCTTTCTGCTTACAATAAGCACAGGGATAAGCCC
ATCAGGGAGCA GGCAGAAAACATTATCCACTTGTTTACTCTGACCAACTTGGGCGCGCCTGCAGCCTTC AAGTA
CTTCGACACCACCATAGACAGAAAGCGGTACACCTCTACAAAGGAGGTCCTG GACGCCACACTGATTCATCAGTC
AATTACGGGGCTCTATGAAACAAGAATCGACCTCT CTCAGCTCGGTGGAGACAAGCGTCCTGCTGCTACTAAGAA
AGCTGGTCAAGCTAAGA AA
4, the acquisition of transcriptional activation domain and its catenation sequence
VP64, T2A and MCP three synthesize from GENEWIZ (Suzhou, China) together, and the sequence of synthesis is (SEQ ID
NO:20):
5’-GTCAAGCTAAGAAAAAGAAACAATTCGGAGGAGGTGGAAGCGGAGGAGGAGGAA GCGGAGGAGG
AGGTAGCGGACCTAAGAAAAAGAGGAAGGTGGCGGCCGCTGGTTCC GGACGGGCTGACGCATTGGACGATTTTGA
TCTGGATATGCTGGGAAGTGACGCCCTCG ATGATTTTGACCTTGACATGCTTGGTTCGGATGCCCTTGATGACTT
TGACCTCGACATG CTCGGCAGTGACGCCCTTGATGATTTCGACCTGGACATGCTGATTAACCAATTCGGAA GCG
GAGAGGGCAGAGGAAGTCTGCTAACATGCGGTGACGTCGAGGAGAATCCTGGA CCTATGGCTTCAAACTTTACTC
AGTTCGTGCTCGTGGACAATGGTGGGACAGGGGATG TGACAGTGGCTCCTTCTAATTTCGCTAATGGGGTGGCAG
AGTGGATCAGCTCCAACTC ACGGAGCCAGGCCTACAAGGTGACATGCAGCGTCAGGCAGTCTAGTGCCCAGAAGA
GAAAGTATACCATCAAGGTGGAGGTCCCCAAAGTGGCTACCCAGACAGTGGGCGGAG TCGAACTGCCTGTCGCCG
CTTGGAGGTCCTACCTGAACATGGAGCTCACTATCCCAAT TTTCGCTACCAATTCTGACTGTGAACTCATCGTGA
AGGCAATGCAGGGGCTCCTCAAA GACGGTAATCCTATCCCTTCCGCCATCGCCGCTAACTCAGGTATCTACAGCG
CTGGAGG AGGTGGAAGCGGAGGAGGAGGAAGCGGAGGAGGAGGTAGCGGACCTAAGAAAAAG
AGGAAGGTGGCGGCCGCTCAATTG-3’
Wherein corresponding VP64 sequence, T2A sequence and MCP sequence difference are as follows:
VP64 (SEQ ID NO:21):
GGTTCCGGACGGGCTGACGCATTGGACGATTTTGATCTGGATATGCTGGGAAGTG ACGCCCTCGATG
ATTTTGACCTTGACATGCTTGGTTCGGATGCCCTTGATGACTTTGAC CTCGACATGCTCGGCAGTGACGCCCTTG
ATGATTTCGACCTGGACATGCTGATTAAC
MCP (SEQ ID NO:22):
ATGGCTTCAAACTTTACTCAGTTCGTGCTCGTGGACAATGGTGGGACAGGGGATG TGACAGTGGCTC
CTTCTAATTTCGCTAATGGGGTGGCAGAGTGGATCAGCTCCAACTC ACGGAGCCAGGCCTACAAGGTGACATGCA
GCGTCAGGCAGTCTAGTGCCCAGAAgAG AAAGTATACCATCAAGGTGGAGGTCCCCAAAGTGGCTACCCAGACAG
TGGGCGGAGT CGAACTGCCTGTCGCCGCTTGGAGGTCCTACCTGAACATGGAGCTCACTATCCCAATT TTCGCT
ACCAATTCTGACTGTGAACTCATCGTGAAGGCAATGCAGGGGCTCCTCAAAG ACGGTAATCCTATCCCTTCCGCC
ATCGCCGCTAACTCAGGTATCTAC
T2A (SEQ ID NO:23):
GGAAGCGGAGAGGGCAGAGGAAGTCTGCTAACATGCGGTGACGTCGAGGAGAA TCCTGGACCT
P65 is obtained from PCR on plasmid Addgene 63798, primer used in PCR are as follows:
P65-F (SEQ ID NO:24):
5’-AGGTGGCGGCCGCTCAATTGCCTTCAGGGCAGATCAGCAACC-3’
P65-R (SEQ ID NO:25):
5’-GCTTCCACCTCCTCCCTGCCCACTAGAGGAAATCTGTGAC-3’
P65 sequence (SEQ ID NO:26) obtained is as follows as a result:
CCTTCAGGGCAGATCAGCAACCAGGCCCTGGCTCTGGCCCCTAGCTCCGCTCCAG TGCTGGCCCAGA
CTATGGTGCCCTCTAGTGCTATGGTGCCTCTGGCCCAGCCACCTGC TCCAGCCCCTGTGCTGACCCCAGGACCAC
CCCAGTCACTGAGCGCTCCAGTGCCCAA GTCTACACAGGCCGGCGAGGGGACTCTGAGTGAAGCTCTGCTGCACC
TGCAGTTCGA CGCTGATGAGGACCTGGGAGCTCTGCTGGGGAACAGCACCGATCCCGGAGTGTTCAC AGATCTG
GCCTCCGTGGACAACTCTGAGTTTCAGCAGCTGCTGAATCAGGGCGTGTC CATGTCTCATAGTACAGCCGAACCA
ATGCTGATGGAGTACCCCGAAGCCATTACCCGG CTGGTGACCGGCAGCCAGCGGCCCCCCGACCCCGCTCCAACT
CCCCTGGGAACCAGC GGCCTGCCTAATGGGCTGTCCGGAGATGAAGATTTCTCAAGCATCGCTGATATGGACT T
TAGTGCCCTGCTGTCACAGATTTCCTCTAGTGGGCAG
HSF1 is obtained from PCR on plasmid Addgene 61426, used PCR primer are as follows:
HSF1-F (SEQ ID NO:27):
5’-GGCAGGGAGGAGGTGGAAGCGGCTTCAGCGTGGACACC-3’
HSF1-R(SEQ ID NO:28):
5’-CCTACCTGATGCCAACAATTctagTTTGCTCTAGTCCTAGgCTAGGAGACAGTGGG
GTCCTTGGC-3’
HSF1 sequence (SEQ ID NO:29) obtained is as follows as a result:
GGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCG TGCCCGACATGA
GCCTGCCTGACCTTGACAGCAGCCTGGCCAGTATCCAAGAGCTCCT GTCTCCCCAGGAGCCCCCCAGGCCTCCCG
AGGCAGAGAACAGCAGCCCGGATTCAG GGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGCTGGACC
CCGGCTCCG TGGACACCGGGAGCAACGACCTGCCGGTGCTGTTTGAGCTGGGAGAGGGCTCCTACT TCTCCGAA
GGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTCGG AGCCTCCCAAAGCCAAGGACCCCACT
GTCTCC
5, the building of pNP-dCas9-VP64-T2A-MCP-p65-HSF1 plasmid
PCR reaction, used primer are carried out by template of pNP-dCas9 are as follows:
PNP-dCas9-F (SEQ ID NO:30): 5 '-AATTGTTGGCATCAGGTAGGCATC-3 '
PNP-dCas9-R (SEQ ID NO:31): 5 '-TTTCTTTTTCTTAGCTTGACCAGCTTTCTTAGT-3 '
With the segment VP64-T2A-MCP of synthesis after amplified production is recycled, PCR product p65 sequence and HSF1 sequence are together
Homologous recombination connection is carried out, correct plasmid is sequenced in selection after converting Escherichia coli.Due to there is the digestion of a BbsI in HSF1
The restriction enzyme site is carried out same sense mutation, used primer for the ease of subsequent experiment by site in aforementioned manners are as follows:
BbsI-HSF-F (SEQ ID NO:32):
5’-GGGCTGTCCGGAGATGAAGAtTTCTCAAGCATCGCTGATA-3’
BbsI-HSF-R (SEQ ID NO:33):
5’-TATCAGCGATGCTTGAGAAaTCTTCATCTCCGGACAGCCC-3’
The resulting plasmid name containing dCas9 albumen are as follows: pNP-dCas9-VP64-T2A-MCP-p65-
HSF1。
Embodiment two
For sgRNA carrier, using the expression of U6B promoter control sgRNA, U6B promoter can in drosophila whole body, including
It is expressed in reproductive system, and does not have tissue specificity.And by the expression of U6B promoter control sgRNA, sgRNA can be made
Expression quantity it is higher.
Reference literature Ren X, Sun J, Housden B E, et al.Optimized gene editing
technology for Drosophila melanogaster using germ line-specific Cas9[J]
.Proceedings of the National Academy of Sciences of the United States of
America, 2013,110 (47): 19012-7. obtains sgRNA carrier by transformation using U6b-sgRNA-short plasmid.Tool
Body construction method is as follows:
Firstly, the sgRNA holder part of U6B-sgRNA-short plasmid is replaced with following stent sequence (SEQ ID
NO:34):
5’-GTTTTAGAGCTAGGCCAACATGAGGATCACCCATGTCTGCAGGGCCTAGCAAGT TAAAATAAGG
CTAGTCCGTTATCAACTTGGCCAACATGAGGATCACCCATGTCTGCAG GGCCAAGTGGCACCGAGTCGGTGCTTTT
T-3’。
Replaced stent sequence includes that can recruit MCP albumen by the MS2 sequence that MCP albumen identifies, MS2, this
Sample can be enrolled into specific site promotion base together with the transcriptional activation domain p65 and HSF1 of MCP protein fusion
Because of transcription, and there are also the blank that one section can identify size with BbsI digestion between U6B promoter and 3 ' UTR for stent sequence
Sequence, about 680bp, with the sgRNA oligonucleotides that 20bp can be inserted after BbsI digestion.
The size when the intervening sequence that one section of spacer is added in the C-terminal of 3 ' UTR of U6B (noncoding region) is convenient for digestion simultaneously
Identification.
Wherein the sequence of spacer is (SEQ ID NO:35):
5’-ACTAGCGTAATATATAGACAATGGTTTTCCGTTGACGTACATACATCTGACGTGT GTTTATTTA
GACATAATAGTTATGTTTTCACATCTTTTTAATGTTCGCTTAATGCGTATGC ATACAAAATTTTTAATTTTCAAC
ACAGTTGTTTTTGTTTTCATC-3’。
So constitute plasmid U6B-sgRNA2.0.
Wherein U6B promoter sequence (SEQ ID NO:36) are as follows:
GTTCGACTTGCAGCCTGAAATACGGCACGAGTAGGAAAAGCCGAGTCAAATGCC GAATGCAGAGTCT
CATTACAGCACAATCAACTCAAGAAAAACTCGACACTTTTTTACC ATTTGCACTTAAATCCTTTTTTATTCGTTA
TGTATACTTTTTTTGGTCCCTAACCAAAAC AAAACCAAACTCTCTTAGTCGTGCCTCTATATTTAAAACTATCAA
TTTATTATAGTCAAT AAATCGAACTGTGTTTTCAACAAACGAACAATAGGACACTTTGATTCTAAAGGAAATT T
TGAAAATCTTAAGCAGAGGGTTCTTAAGACCATTTGCCAATTCTTATAATTCTCAACT GCTCTTTCCTGATGTTG
ATCATTTATATAGGTATGTTTTCCTCAATACTTC
3 ' UTR sequence of U6B (SEQ ID NO:37) are as follows:
TTGCTCACCTGTGATTGCTCCTACTCAAATACAAAAACATCAAATTTTCTGTCAAT AAAGCATATTT
ATTTATATTTATTTTACAGGAAAGAATT
The building of three flySAMG carrier of embodiment
1, the integration of dCas9 carrier and sgRNA2.0 carrier
The part of U6B-sgRNA2.0 expression sgRNA and spacer is cloned while drawing in design with the mode of PCR
Restriction enzyme site NheI and SpeI, used primer are added respectively in N-terminal and C-terminal when object are as follows:
SgRNA2.0-F (SEQ ID NO:38):
5’-AAACTCATCAATGTATCTTAACTAGTGATGAAAACAAAAACAACTGTGTTGAAA AT-3’
SgRNA2.0-R (SEQ ID NO:39):
5’-GCACACTTATTACGTGGCCAGAGCTCTGCTAGCTTGTTCGACTTGCAGCCTGAA ATACG-3’
The portion for the pNP-dCas9-VP64-T2A-MCP-p65-HSF1 that embodiment one is prepared by way of PCR
Sub-sequence is expanded as carrier framework, and used primer is
FlySAM2.0-F (SEQ ID NO:40): 5 '-TGGCCACGTAATAAGTGTGCGTT-3 '
FySAM2.0-R (SEQ ID NO:41): 5 '-TGGAACCAGACATGATAAGATACATTGATGAGT-3 '
Then two kinds of PCR products are subjected to the carrier flySAM2.0 after homologous recombination is integrated.
PVALIUM22 carrier (wherein, pVALIUM22 carrier reference literature " A genome- is cloned with the mode of PCR simultaneously
Scale shRNA rescource for transgenic RNAi in Drosophila, Nat Methods.2011 May;
8 (5): 405-407.doi:10.1038/nmeth.1592 " is obtained) in K10polyA sequence, followed by SpeI and
AvrII carries out digestion connection, and the SV40 sequence in flySAM2.0 is replaced with K10polyA sequence.K10poly A sequence can
Enhance the stability and expression of transcript in reproductive system.
K10-F (SEQ ID NO:42):
5’-AGCCAAGGACCCCACTGTCTCCTAGGTCTGATCTGCTAGACAATTGTTGGCA-3’
K10-R (SEQ ID NO:43):
5’-GTTTTGTTTTCATCACTAGTCCAATCCGCCGCACCCTCAGCTCCAA-3’
Wherein K10ployA sequence (SEQ ID NO:44) is as follows:
TAACATTATACCTAAACCCATGGTCAAGAGTAAACATTTCTGCCTTTGAAGTTGAG AACACAATTAA
GCATCCCCTGGTTAAACCTGACATTCATACTTGTTAATAGCGCCATAA ACATAGCACCAATTTCGAAGAAATCAG
TTAAAAGCAATTAGCAATTAGCAATTAGCAA TAACTCTGCTGACTTCAAAACGAGAAGAGTTGCAAGTATTTGTA
AGGCACAGTTTATA GACCACCGACGGCTCATTAGGGCTCGTCATGTAACTAAGCGCGGTGAAACCGAATTG AAC
ATATAGTGGAATTATTATTATCAATGGGGAAGATTTAACCCTCAGGTAGCAAAGTA ATTTAATTGCAAATAGAGA
GTCCTAAGACTAAATAATATATTTAAAAATCTGGCCCTTTG ACCTTGCTTGTCAGGTGCATTTGGGTTCAATCGT
AAGTTGCTTCTATATAAACACTTTC CCCATCCCCGCAATAATGAAGAATACCGCAGAATAAAGAGAGATTTGCAA
CAAAAAAT AAAGGCATTGCGAAAACTTTTTATGGGGGATCATTACACTCGGGCCTACGGTTACAAT TCCCAGCC
ACTTAAGCGACAAGTTTGGCCAACAATCCATCTAATAGCTAATAGCGCAA TCACTGGTAATCGCAAGAGTATATA
GGCAATAGAACCCATGGATTTGACCAAAGGTAA CCGAGACAATGGAGAAGCAAGAGGATTTCAAACTGAACACCC
ACAGTGCTGTGTACT ACCACTGGCGCGTTTGGGAGCTCACTGGCCTGATGCGTCCTCCGGGCGTTTCAAGCCT G
CTTTACGTGGTATACTCCATTACGGTCAACTTGGTGGTCACCGTGCTGTTTCCCTTGA GCTTGCTGGCCAGGCTG
CTGTTCACCACCAACATGGCCGGATTGTGCGAGAACCTGA CCATAACTATTACCGATATTGTGGCCAATTTGAAG
TTTGCGAATGTGTACATGGTGAGG AAGCAGCTCCATGAGATTCGCTCTCTCCTAAGGCTCATGGACGCTAGAGCC
CGGCTGG TGGGCGATCCCGAGGAGATTTCTGCCTTGAGGAAGGAAGTGAATATCGCACAGGGCA CTTTCCGCAC
CTTTGCCAGTATTTTCGTATTTGGCACTACTTTGAGTTGCGTCCGCGTG GTCGTTCGCCCGGATCGAGAGCTCCT
GTATCCGGCCTGGTTCGGCGTTGACTGGATGC ACTCCACCAGAAACTATGTGCTCATCAATATCTACCAGCTCTT
CGGCTTGATAGTGCAG GCTATACAGAACTGCGCTAGTGACTCCTATCCGCCTGCGTTTCTCTGCCTGCTCACGGG
TCATATGCGTGCTTTGGAGCTGAGGGTGCGGCGGATTGG
Then, the p-transposase promoter in pVALIUM22 carrier is cloned also with the mode of PCR, then benefit
Digestion is carried out with KpnI with EcoRV to connect, and the DSCP promoter in upper step carrier is replaced with into p- transposase promoter (p-
transposase promoter).DSCP promoter is changed to p-transposase promoter, p- can be utilized
The expression of transposase promoter promotor gene in reproductive system, so that expression efficiency is higher.
Wherein primer used in PCR amplification p-transposase promoter is respectively as follows:
P-trans-F (SEQ ID NO:45):
5’-CCAAGCTTGATATCATCGATCTCGAGGCTGCATCCAACGCGTTGGGAGCTCTCC
GGATCAATTCGGCTTCAGGCACAGTCG-3’
p-trans-R(SEQ ID NO:46):
5’-GGCCATGGTGGCGGTACCAATGAACAGGACCTAAC-3’
Pcr amplification product is connected in carrier obtained in the previous step, then proceedes to obtain using KpnI cutting previous step
Carrier, be then connected into the oligonucleotide fragment formed by following primer annealing, through sequence verification and ultimately form flySAMG
Carrier, as shown in Figure 1.
Annealing-F(SEQ ID NO:47):5’-CCGCCCGGGGATCAGAATTGAGATCTGTGGTAC-3’
Annealing-R(SEQ ID NO:48):5’-CACAGATCTCAATTCTGATCCCCGGGCGGGTAC-3’
It is incorporated by SEQ ID NO:47 and SEQ ID NO:48 oligonucleotide sequences formed of annealing and is utilized SEQ ID
NO:45 and SEQ ID NO:46 is as in the obtained amplified production of primer, as p-transposase promoter sequence.
Wherein p-transposase promoter sequence (SEQ ID NO:49) is as follows:
AGCCGTAGCTTACCGAAGTATACACTTAAATTCAGTGCACGTTTGCTTGTTGAGAG GAAAGGTTGTG
TGCGGACGAATTTTTTTTTGAAAACCGGTGATAGAGCCTGAACCAG AAAAGATAAAAGAAGGCTATACCAGTGGG
AGTACACAAACAGAGTAAGTTTGAATAG TAAAAAAAATCATTTATGTAAACAATAACGTGACTGTGCGTTAGGTC
CTGTTCATTGGT ACCCGCCCGGGGATCAGAATTGAGATCTGT
As seen from Figure 1, constructed flySAMG carrier (i.e. transcriptional activation system) includes two Expression elements, i.e.,
DCas9 protein expression element and sgRNA Expression element are also used to screen positive plasmid containing AmpR;AttB is used to entirely to carry
The site attP on body site-directed integration to drosophila gene group;Vermilion is the marker gene of a screening transgenic drosophila;Two
A insulator gypsy is located at the upstream of dCas9 protein expression element and sgRNA Expression element, to guarantee sgRNA table
Up to the high efficient expression of element and dCas9 protein expression element;Two 5 X UAS are the binding sites of Gal4, under the action of Gal4
Start the expression of downstream gene;DCas9 Expression element includes dCas9 albumen coded sequence, is followed successively by VP64 code sequence downstream
Column, T2A coded sequence, MCP albumen coded sequence, P65 code sequence sequence and HSF1 coded sequence form dCas9-VP64-
T2A-MCP-P65-HSF1 Expression element, and the Expression element is using p-transposase promoter as promoter, can be with
Start the expression of this dCas9-VP64-T2A-MCP-P65-HSF1 of downstream transcription, introne ftz sequence and K10polyA sequence position
In the downstream of the Expression element, the stabilization and high efficient expression of this transcript can be helped;SgRNA Expression element is with U6B promoter
Start the expression of sgRNA2.0, sgRNA2.0 can be connected on carrier between two Bbs I restriction enzyme sites, sgRNA
MS2 structure containing the identification of MCP albumen on scafford (sgRNA stent sequence).
The activation of target gene in 4 drosophila reproductive system of embodiment
Dpp, tkv and bam are important for maintaining the self-renewing of drosophila ovarian germinal stem cell and differentiation to have the function of,
The abnormal expression of any one gene can all generate the exception of germline stem cell and reproductive system, generate apparent genetic defect.
In order to verify the validity of flySAMG system, the transcriptional activation that we construct these three genes according to the methods below turns base
Because of drosophila, and have activated these three genes respectively in drosophila reproductive system.
1, the building of the flySAMG carrier of dpp, tkv and bam is activated
5 ' the UTR sequences of dpp, tkv and bam are searched in flybase (http://flybase.org/), and in each base
Because 5 ' UTR upstream find PAM sequence (NGG), select close to higher 20 nucleotide of the CG content of the upstream of NGG as
sgRNA.By the antisense base sequences (anti-sense oligo) and its reverse complementary sequence (sense oligo) of sgRNA
It is individually placed to the corresponding position of following primer, wherein ttcg and aaac is the viscosity end after BbsI digestion flySAMG carrier respectively
End, after the primer annealing of different genes, connect with the carrier after BbsI digestion:
5’-ttcg“anti-sense oligo”-3’
5’-aaac“sense oligo”-3’
Obtain six primers for three different genes:
Dpp-sg-F (SEQ ID NO:50): 5 '-ttcgCGTCCAAAGCGGCCGAGGCA-3 '
Dpp-sg-R (SEQ ID NO:51): 5 '-aaacTGCCTCGGCCGCTTTGGACG-3 '
Tkv-sg-F (SEQ ID NO:52): 5 '-ttcgCGTACGTACATATGGTGGGG-3 '
Tkv-sg-R (SEQ ID NO:53): 5 '-aaacCCCCACCATATGTACGTACG-3 '
Bam-sg-F (SEQ ID NO:54): 5 '-ttcgTACAATTATACACACTGATT-3 '
Bam-sg-R (SEQ ID NO:55): 5 '-aaacAATCAGTGTGTATAATTGTA-3 '
It after three pairs of primers of synthesis are annealed respectively, is connect with the flySAMG carrier after BbsI digestion, converts large intestine bar
Bacterium DH5 α, selects positive colony, and correct plasmid, respectively flySAMG-dpp, flySAMG-tkv and flySAMG- is sequenced
bam。
2, the acquisition of transgenic fly
It is y sc that 3 flySAMG carriers obtained in the previous step are injected into genotype respectively by way of microinjection
v nanos-integrase;In the drosophila embryos of attP2,25 degrees Celsius of cultures are put in, and final by way of genetic integration
Obtain homozygous transgene transcription activation drosophila.
3, influence of the activation dpp, tkv or bam to drosophila reproductive system
By transgenic fly obtained in step 2 and nanos-Gal4 tool drosophila hybrid, 25 DEG C are incubated at, humidity is
60% incubator, and observe the phenotype of offspring's female Drosophila ovary germarium.
As a result as shown in Fig. 2, wherein A represents control drosophila ovary germarium (control drosophila is does not carry out transgenosis in Fig. 2
The drosophila of processing and nanos-Gal4 tool drosophila hybrid female descendant obtained), B, C and D represent specific gene transcription
The drosophila ovary germarium of activation.Wherein grey dot (1B1 signal) shown in figure label is germline stem cell.From figure
In as can be seen that in control, containing there are two germline stem cells in normal germarium, and activate BMP signal path it is crucial because
Sub- dpp and tkv can then inhibit the atomization of germline stem cell, generate the phenotype (B and C in Fig. 2) that germline stem cell increases;
Germline stem cell can be promoted to break up in advance when activating crucial differentiation factor bam, eventually lead to the whole of germline stem cell and lose
(D in Fig. 2).This result and these genes are known that be overexpressed phenotype identical, it was demonstrated that flySAMG transcriptional activation system exists
In drosophila reproductive system can special, efficiently activating genes of interest expression, and generate corresponding phenotype.
In the description of the present invention, it is to be understood that, term " center ", " longitudinal direction ", " transverse direction ", " length ", " width ",
" thickness ", "upper", "lower", "front", "rear", "left", "right", "vertical", "horizontal", "top", "bottom" "inner", "outside", " up time
The orientation or positional relationship of the instructions such as needle ", " counterclockwise ", " axial direction ", " radial direction ", " circumferential direction " be orientation based on the figure or
Positional relationship is merely for convenience of description of the present invention and simplification of the description, rather than the device or element of indication or suggestion meaning must
There must be specific orientation, be constructed and operated in a specific orientation, therefore be not considered as limiting the invention.
In addition, term " first ", " second " are used for descriptive purposes only and cannot be understood as indicating or suggesting relative importance
Or implicitly indicate the quantity of indicated technical characteristic.Define " first " as a result, the feature of " second " can be expressed or
Implicitly include at least one this feature.In the description of the present invention, the meaning of " plurality " is at least two, such as two, three
It is a etc., unless otherwise specifically defined.
In the present invention unless specifically defined or limited otherwise, fisrt feature in the second feature " on " or " down " can be with
It is that the first and second features directly contact or the first and second features pass through intermediary mediate contact.Moreover, fisrt feature exists
Second feature " on ", " top " and " above " but fisrt feature be directly above or diagonally above the second feature, or be merely representative of
First feature horizontal height is higher than second feature.Fisrt feature can be under the second feature " below ", " below " and " below "
One feature is directly under or diagonally below the second feature, or is merely representative of first feature horizontal height less than second feature.
In the description of this specification, reference term " one embodiment ", " some embodiments ", " example ", " specifically show
The description of example " or " some examples " etc. means specific features, structure, material or spy described in conjunction with this embodiment or example
Point is included at least one embodiment or example of the invention.In the present specification, schematic expression of the above terms are not
It must be directed to identical embodiment or example.Moreover, particular features, structures, materials, or characteristics described can be any
It can be combined in any suitable manner in a or multiple embodiment or examples.In addition, without conflicting with each other, the technology of this field
The feature of different embodiments or examples described in this specification and different embodiments or examples can be combined by personnel
And combination.
Although the embodiments of the present invention has been shown and described above, it is to be understood that above-described embodiment is example
Property, it is not considered as limiting the invention, those skilled in the art within the scope of the invention can be to above-mentioned
Embodiment is changed, modifies, replacement and variant.
Claims (10)
1. a kind of transcriptional activation system, which is characterized in that the transcriptional activation system include dCas9 protein expression element and
SgRNA Expression element,
Contain p- transposase promoter, dCas9 albumen coded sequence, MCP encoding histone sequence on the dCas9 protein expression element
Column and activating transcription factor coded sequence, the activating transcription factor coded sequence are located at the dCas9 albumen coded sequence
Downstream, the MCP albumen coded sequence are located at the downstream of the dCas9 albumen coded sequence;
Contain U6B promoter, sgRNA insertion point and MCP protein recognition sequences on the sgRNA Expression element.
2. transcriptional activation system according to claim 1, which is characterized in that the activating transcription factor coded sequence is selected from
At least one of VP64 coded sequence, P65 coded sequence or HSF1 coded sequence;
Optionally, the activating transcription factor coded sequence includes VP64 coded sequence, P65 coded sequence and HSF1 code sequence
Column, the VP64 coded sequence are located at the upstream of the MCP albumen coded sequence, the VP64 coded sequence and the MCP egg
Contain self cleavage peptide T2A coded sequence between white coded sequence, the downstream of the MCP albumen coded sequence is followed successively by the P65
Coded sequence and the HSF1 coded sequence;
Optionally, the VP64 coded sequence is SEQ ID NO:21, and the coded sequence of the P65 is SEQ ID NO:26, institute
Stating HSF1 coded sequence is SEQ ID NO:27, and the coded sequence of the self cleavage peptide T2A is SEQ ID NO:23;
Optionally, the primer sequence for expanding the P65 coded sequence is SEQ ID NO:24 and SEQ ID NO:25;
Optionally, the primer sequence for expanding the HSF1 coded sequence is SEQ ID NO:27 and SEQ ID NO:28.
3. transcriptional activation system according to claim 1 or 2, which is characterized in that the dCas9 protein expression element and institute
SgRNA Expression element is stated to connect by plasmid vector;
Optionally, the plasmid vector is pNP plasmid;
Optionally, the MCP albumen coded sequence is SEQ ID NO:22;
Optionally, the MCP protein recognition sequences are MS2 sequence.
4. transcriptional activation system described in any one of claim 1 to 3, which is characterized in that further comprise:
At least two gypsy genes, the gypsy gene are located at the dCas9 protein expression element and the sgRNA table
Up to the upstream of element,
Ftz intron sequences, the ftz intron sequences are located at the downstream of the dCas9 protein expression element;
K10polyA sequence, the K10poly A sequence are located at the downstream of the dCas9 protein expression element;
Optionally, the gypsy gene order is SEQ ID NO:5;The ftz intron sequences are SEQ ID NO:6;It is described
K10polyA sequence is SEQ ID NO:44;
Optionally, further comprise: 10 × UAS sequence, 10 × UAS sequence are located at the upper of the p- transposase promoter
Trip;
Optionally, 10 × UAS sequence is SEQ ID NO:10;
Optionally, further comprise: antibiotic marker genes, vermilion gene, attB gene;
Optionally, the antibiotic marker genes are ampicillin resistance gene, the core of the ampicillin resistance gene
Acid sequence is SEQ ID NO:7, and the vermilion gene order is SEQ ID NO:8, and the attB gene order is SEQ
ID NO:9。
5. a kind of transcriptional activation system characterized by comprising
DCas9 protein expression element, the dCas9 protein expression element include p- transposase promoter and dCas9 encoding histone
Sequence, the dCas9 albumen coded sequence are located at the downstream of the p- transposase promoter, the dCas9 albumen coded sequence
Downstream be followed successively by VP64 coded sequence, self cleavage peptide T2A coded sequence, MCP albumen coded sequence, P65 coded sequence and
HSF1 coded sequence;
SgRNA Expression element contains U6B promoter, sgRNA insertion point, MS2 sequence and U6B on the sgRNA Expression element
3 ' non-translational region sequences;
At least two gypsy genes, the gypsy gene are located at the upstream of the dCas9 protein expression element and described
The upstream of sgRNA Expression element;
Ftz intron sequences, the ftz intron sequences are located at the downstream of the dCas9 protein expression element;
K10polyA sequence, the K10polyA sequence are located at the downstream of the ftz intron sequences;
Antibiotic marker genes, vermilion gene and attB gene;
Optionally, the transcriptional activation system further comprises: 10 × UAS sequence, and 10 × UAS sequence is located at the p- and turns
The upstream of seat enzyme promoters;
Optionally, the transcriptional activation system is as shown in Figure 1.
6. a kind of method for constructing transcriptional activation system according to any one of claims 1 to 5 characterized by comprising
(1) include using plamid vector construction dCas9 albumen coded sequence the first recombinant plasmid;
(2) activating transcription factor coded sequence being connected on first recombinant plasmid, building obtains the second recombinant plasmid,
Described in activating transcription factor coded sequence be located at the downstream of the dCas9 albumen coded sequence;
(3) sgRNA Expression element is connected on second recombinant plasmid, building obtains transcriptional activation system.
7. according to the method described in claim 6, it is characterized in that, step (1) further comprises:
Cas9 albumen coded sequence is connected on plasmid vector by (1-1), and building obtains including Cas9 albumen coded sequence
Third recombinant plasmid;
(1-2) is mutated the Cas9 albumen coded sequence on the third recombinant plasmid, obtains including described
First recombinant plasmid of dCas9 albumen coded sequence;
Optionally, the plasmid vector is pNP plasmid;
Optionally, the primer sequence for expanding the Cas9 albumen coded sequence is SEQ ID NO:1 and SEQ ID NO:2,
The dCas9 albumen coded sequence is SEQ ID NO:19;
Optionally, the Cas9 albumen coded sequence is connected to the plasmid by way of homologous recombination and carried by step (1-1)
On body;
Optionally, utilize reverse complemental mutant primer SEQ ID NO:11 and SEQ ID NO:12 to described in step (1-2)
The base that the 10th amino acids are encoded on Cas9 albumen coded sequence is mutated, and reverse complemental mutant primer SEQ ID is utilized
NO:13 and SEQ ID NO:14 is mutated the base of the 840th amino acids in the Cas9 albumen coded sequence;
Optionally, the activating transcription factor coded sequence is connected to described by way of homologous recombination in step (2)
On one recombinant plasmid;
Optionally, sgRNA Expression element is connected to second recombinant plasmid by way of homologous recombination in step (3)
On.
8. method according to claim 6 or 7, which is characterized in that on the sgRNA Expression element containing stent sequence and
3 ' non-translational region sequence of U6B promoter contains MCP protein recognition sequences in the stent sequence;
Optionally, the stent sequence is SEQ ID NO:34, and the sequence of the U6B promoter is SEQ ID NO:36, described
3 ' non-translational region sequence of U6B promoter is SEQ ID NO:37.
9. a kind of method of prepare transgenosis drosophila characterized by comprising
(a) the sgRNA sequence for targeting target gene is imported into transcriptional activation system according to any one of claims 1 to 5
In, obtain the transcriptional activation system of targeting target gene;
(b) the transcriptional activation system introducing of the targeting target gene is obtained into transgenic fly into drosophila embryos;
Optionally, step (a) further comprises:
(a-1) the transcriptional activation system is subjected to digestion processing, obtains the transcriptional activation system by digestion processing;
(a-2) the sgRNA sequence of the targeting target gene after annealed pairs is connected to turn by digestion processing
In the sgRNA insertion point for recording activation system, so that the sgRNA sequence of the targeting target gene is imported into described turn
It records in activation system.
10. a kind of method of gene expression in activation drosophila reproductive system characterized by comprising
The sgRNA sequence for targeting target gene is imported into transcriptional activation system according to any one of claims 1 to 5,
Obtain the transcriptional activation system of targeting target gene;
By the transcriptional activation system introducing of the targeting target gene into drosophila embryos, transgenic fly is obtained;
By the transgenic fly and the drosophila hybrid culture of Gal4 tool, drosophila offspring is obtained, to activate drosophila reproductive system
The expression of middle target gene.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201811312144.5A CN109517840B (en) | 2018-11-06 | 2018-11-06 | Efficient transcriptional activation system in drosophila reproductive system |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201811312144.5A CN109517840B (en) | 2018-11-06 | 2018-11-06 | Efficient transcriptional activation system in drosophila reproductive system |
Publications (2)
Publication Number | Publication Date |
---|---|
CN109517840A true CN109517840A (en) | 2019-03-26 |
CN109517840B CN109517840B (en) | 2021-01-01 |
Family
ID=65773108
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN201811312144.5A Active CN109517840B (en) | 2018-11-06 | 2018-11-06 | Efficient transcriptional activation system in drosophila reproductive system |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN109517840B (en) |
Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN104120127A (en) * | 2014-07-01 | 2014-10-29 | 清华大学 | Separated oligonucleotide and applications thereof |
CN104561095A (en) * | 2015-01-27 | 2015-04-29 | 长春力太生物技术有限公司 | Preparation method for transgenic mice capable of producing human nerve growth factor |
CN107012164A (en) * | 2017-01-11 | 2017-08-04 | 电子科技大学 | CRISPR/Cpf1 Plant Genome directed modifications functional unit, the carrier comprising the functional unit and its application |
-
2018
- 2018-11-06 CN CN201811312144.5A patent/CN109517840B/en active Active
Patent Citations (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN104120127A (en) * | 2014-07-01 | 2014-10-29 | 清华大学 | Separated oligonucleotide and applications thereof |
CN104561095A (en) * | 2015-01-27 | 2015-04-29 | 长春力太生物技术有限公司 | Preparation method for transgenic mice capable of producing human nerve growth factor |
CN107012164A (en) * | 2017-01-11 | 2017-08-04 | 电子科技大学 | CRISPR/Cpf1 Plant Genome directed modifications functional unit, the carrier comprising the functional unit and its application |
Non-Patent Citations (2)
Title |
---|
YU JIA ET AL.,: "Next-generation CRISPR/Cas9 transcriptional activation in Drosophila using flySAM", 《PNAS》 * |
贾豫等: "高效特异的CRISPR_dCas9转录激活系统--flySAM系统", 《遗传》 * |
Also Published As
Publication number | Publication date |
---|---|
CN109517840B (en) | 2021-01-01 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
US20220162647A1 (en) | Method for inducing targeted meiotic recombinations | |
EP1152056B1 (en) | Method for modifying genetic characteristics of an organism | |
CN110551759B (en) | Composition and method for improving recombination efficiency of transgenic cells | |
CN109312308A (en) | The genome editor of human nerve stem cell is carried out by using nuclease | |
CN109072207A (en) | Improved method for modifying target nucleic acid | |
JP2022520428A (en) | Enzyme with RUVC domain | |
CN106795521A (en) | The method and composition of target gene seat for modifying | |
CN107794272A (en) | A kind of CRISPR genome editor's systems of high specific | |
CA3066599A1 (en) | Method for producing dna-edited eukaryotic cell, and kit used in the same | |
EP3263708B1 (en) | Protein with recombinase activity for site-specific dna-recombination | |
CN109415729A (en) | With the gene editing reagent for reducing toxicity | |
JP6958917B2 (en) | How to make gene knock-in cells | |
CN109154001A (en) | Novel minimum UTR sequence | |
CN106061511A (en) | Construct and sequence for enhanced gene expression | |
CN106676075A (en) | PG-haESCs (parthenogenetic-haploid embryonic stem cells) as well as preparation and application thereof | |
CN102453716A (en) | Clone and application of pig skeletal muscle specificity expression gene alpha-actin promoters | |
WO2002098455A8 (en) | Production of recombinant human arylsulfatase a | |
CN109517840A (en) | Efficient transcriptional activation system in drosophila reproductive system | |
WO2023046153A1 (en) | Circular rna and preparation method thereof | |
US20240101983A1 (en) | Programmable rna editing platform | |
US11203760B2 (en) | Gene therapy DNA vector GDTT1.8NAS12 and the method for obtaining thereof | |
CN109563508A (en) | By fixed point DNA cracking and repair targeting protein diversification in situ | |
CN107058324A (en) | Rice root specific expression promoter POsRO4 and corresponding rice cultivating method | |
CN106478791A (en) | Application with corn male fertility-associated protein and its encoding gene | |
Muzaffar et al. | History of biotechnology |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination | ||
GR01 | Patent grant | ||
GR01 | Patent grant |