CN108961229A - Cardiovascular OCT image based on deep learning easily loses plaque detection method and system - Google Patents

Cardiovascular OCT image based on deep learning easily loses plaque detection method and system Download PDF

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CN108961229A
CN108961229A CN201810678850.5A CN201810678850A CN108961229A CN 108961229 A CN108961229 A CN 108961229A CN 201810678850 A CN201810678850 A CN 201810678850A CN 108961229 A CN108961229 A CN 108961229A
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oct image
image
oct
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李林灿
贾同
原志伟
陈浩锋
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Northeastern University China
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    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00Image analysis
    • G06T7/0002Inspection of images, e.g. flaw detection
    • G06T7/0012Biomedical image inspection
    • G06T5/70
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/10Image acquisition modality
    • G06T2207/10072Tomographic images
    • G06T2207/10101Optical tomography; Optical coherence tomography [OCT]
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/20Special algorithmic details
    • G06T2207/20081Training; Learning
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/20Special algorithmic details
    • G06T2207/20084Artificial neural networks [ANN]
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/30Subject of image; Context of image processing
    • G06T2207/30004Biomedical image processing
    • G06T2207/30101Blood vessel; Artery; Vein; Vascular

Abstract

The present invention provides the cardiovascular OCT images based on deep learning easily to lose plaque detection method and system.Described method includes following steps: obtaining angiocarpy OCT image to be detected from OCT image documentation equipment instrument first and establishes image data set;By the patch region in specialist mark OCT image;Data augmentation is carried out to original digital image data collection by the way of scalloping;Original OCT image is denoised using a kind of full convolutional neural networks and extracts area-of-interest.Using object detection field, state-of-the-art Faster R-CNN frame positions and identifies the easy loss patch in OCT image at present;Output marks out the easily OCT image of loss plaque location and stores to image data.The experiment proved that the OCT image proposed by the present invention based on deep learning easily loses, plaque detection method and system discrimination is high, and accurate positioning, performance is stablized, and detection speed is exceedingly fast, and has stronger robustness and higher clinical value.

Description

Cardiovascular OCT image based on deep learning easily loses plaque detection method and system
Technical field
The present invention relates to the field of medical instrument technology, are related to a kind of based on depth learning technology detection angiocarpy OCT image In easy loss patch method and system.
Background technique
The patch that vulnerable plaque (Vulnerable Plaque) refers to that those are unstable and has thrombophilia.Rapid wear Patch and acute cardiovascular event are related closely, are to cause thrombus, cause acute coronary artery syndrome, coronary heart disease and even lead The main reason for causing sudden death.There are about 19,000,000 patients because of acute coronary syndrome (ACS) and cardiogenic sudden every year in the world It is dead and dead, because unstable Coronary Atherosclerotic Plaque rupture is further formed thrombus and leads to the patient of myocardial infarction 70% is accounted for, therefore cardiovascular easily loss plaque detection is of great significance in terms of cardiovascular disease prevention.
Optical coherence tomography (OCT) developed in recent years is image in current domestic and international newer coronary artery Technology, resolution ratio are about 10 μm, are 10 times of IVUS resolution ratio.And OCT has tissue resolving ability, that is, passes through OCT image Can basic understanding patch main component and histologic characteristics, therefore cardiovascular optical coherence tomography (IVOCT) technology at For at present clinically for detecting the prefered method of cardiovascular vulnerable plaque.
The cardiovascular easily loss patch of clinical detection is that analysis OCT image is manually read by doctor at present, observes its texture Feature and elasticity.It takes time and effort in this way and the case where mistaken diagnosis easily occurs.
The algorithm that patch is easily lost in current existing automatic detection IVOCT image mainly uses SVM classifier, uses Shallow-layer CNN neural network etc..
Due to the characteristic of OCT image imaging, the more speckle noise that image contains, to the interference of testing result compared with Greatly, therefore before detection easily loss patch it is very necessary the operations such as image accurately to be denoised, is divided.It is existing at present automatic Denoising, partitioning algorithm are mainly the algorithm designed based on image grayscale, Gradient Features.
The method of the artificial read tablet of doctor used clinical at present needs doctor to have professional experiences knowledge abundant, and by It is high in OCT image resolution, 200 multiple images will be generated to the bracket scanning of one section of 4cm, taken so that doctor diagnosed is time-consuming Power is also easy to the case where failing to pinpoint a disease in diagnosis, mistaken diagnosis occur.
The algorithm that patch is easily lost in existing automatic detection is based primarily upon traditional algorithm such as SVM classifier or shallow-layer volume Product neural network (CNN), the accuracy detected in this way is unsatisfactory, and detection speed also has to be hoisted.
Due to the imaging characteristic of OCT image, image contains more speckle noise, produces interference to detection lesion. Current Denoising Algorithm is mainly based upon the algorithm of image grayscale, Gradient Features design, such as the Denoising Algorithm based on kernel function, But can only realize and remove partial noise, it cannot still achieve satisfactory results.
Summary of the invention
Of the existing technology in order to solve the problems, such as, the present invention proposes that a kind of OCT image based on deep learning easily loses Plaque detection method and system realize the easy loss patch in quick, accurate detection OCT image.
The specific technical proposal of the invention is:
Cardiovascular OCT image based on deep learning easily loses plaque detection method, comprises the following steps that
Step 1: obtaining angiocarpy OCT image from OCT image documentation equipment, data augmentation is carried out to image data set;
Step 1-1 obtains the data set being made of m OCT angiocardiograms, including containing easy loss patch Positive sample and negative sample without easy loss patch, positive sample quantity are greater than negative sample quantity, and all positive samples are by Special Medical Teacher marks out the specific location of easily loss patch;
Step 1-2 carries out data augmentation to the data set of m OCT angiocardiogram compositions, to obtain 4m~10m Sample;The data augmentation mode includes that appropriate part expansion, contraction, torsion, corolla and the torsion of flag shape are carried out to original image It is bent;
Step 2: being denoised and extracted area-of-interest to cardiovascular OCT image with full convolutional neural networks;
Data set is divided into training set, verifying collection and test set, training set and verifying each image pair of collection by step 2-1 A label figure is answered, the label figure is to remove background, conduit redundance, only retains interested region (RoI);Test set There is no label figure;By training set, the verifying collection input full convolutional network training, with the performance of test set test network;
After the full convolutional neural networks of step 2-2, step 2-1 show well on test set, by all images of data set Area-of-interest is denoised and extracted using the full convolutional neural networks;
Step 3: being positioned and identified in cardiovascular OCT image with Faster R-CNN target detection frame and easily lose patch; Faster R-CNN is the frame that current object detection field is most advanced, most popular.It walks four of target detection substantially Suddenly within (candidate region generates, feature extraction, classification, position refine) unification to a depth network frame, all calculating do not have There is repetition, completed in GPU completely, substantially increases the speed of service.
Training dataset image passes through full convolutional network processing described in step 2, and every figure correspondence is marked by specialist Patch region co-ordinate position information;FasterR-CNN algorithm is made of two big modules: (1) network (Region is suggested in region Proposal Network, RPN), (2) Fast R-CNN detects network;
Step 3-1 suggests that network extracts detection zone using region, it can be with the convolution of entire detection network share full figure Feature, so that region suggests hardly taking time.Region suggests that network carries out feature extraction first, then generates candidate region (anchor), window classification and position refine are finally carried out;
Step 3-2 suggests network for subsequent trained region, gives each candidate region distribution class label { target, non-targeted }; The label setting in network candidates region, which is described as follows, to be suggested to region:
Target: it is greater than x with the registration of any reference standard (ground truth) bounding box (bounding box) The candidate region of (IoU > x);
It is non-targeted: to be less than the candidate region of (1-x) with the registration of all reference standard bounding boxs;
Since feature extraction network extracts large number of candidate frame, there are many overlapping regions between each candidate frame, adopt Realize that detection block merges and deletion with non-maxima suppression method (NMS, non-maximum suppression);Specifically, by institute There is the score of candidate frame to sort, chooses best result and its corresponding frame;X (IoU will be greater than with the registration of top score candidate frame > x) candidate frame all delete, be only left this top score candidate frame;After non-maxima suppression method, candidate region is arranged Sequence takes the top n after sorting to detect;
Step 3-3 is realized most after region suggests that network (RPN) extraction obtains candidate region using Fast R-CNN module Whole detection and identification makes the convolutional layer that network is suggested in region and Fast R-CNN shares ResNet101 by training;
Step 4: system stores detection data, output test result;
To each OCT image of OCT image documentation equipment acquisition, can be obtained after step 2, the processing of 3 deep learning methods To marking out the output result for easily losing plaque region domain and its probability on image.
Further, the full convolutional network model framework that above-mentioned steps 2 use: the full convolutional neural networks by left side receipts The extensions path on contracting path and right side composition, it is U-shaped integral into one.N times down-sampling is carried out to input picture and constitutes left side contraction Path carries out n times up-sampling to image and constitutes right extension path.Wherein, constricted path by two repeated applications convolution kernel Size be 3*3 convolutional layer form, each convolutional layer follow an amendment linear unit (rectified linear unit, ReLU), down-sampling (down sampling) of A rear progress of every convolution, the maximum for the 2*2 that down-sampling operation is 2 by step-length Pond layer (max pooling) is completed, and each down-sampling step doubles feature number of active lanes;Right extension path repeated application The convolutional layer that two convolution kernel sizes are 3*3 each follows an amendment linear unit, carries out after every convolution A times primary Up-sampling, up-sampling (up sampling) halve the quantity in feature channel;The convolution kernel of right extension path the last layer is big It is small be 1*1, by characteristic pattern be converted into certain depth as a result, if the pixel of an image is divided into B classification, certain depth Equal to B.
Further, in above-mentioned steps 3-1 feature extraction using deep learning network ResNet101;It generates candidate Region is each position to the image, considers that x kind ratio, y kind size amount to the candidate window of x*y size;It carries out When window classification and position refine, classification layer exports the probability that x*y candidate region on each position belongs to foreground and background; Window, which returns layer and exports each candidate region in each position and correspond to window, should translate the parameter of scaling.
Further, above-mentioned steps 3-3, specific training process are as follows: suggest the Suggestion box that network generates using region, By Fast R-CNN training, one is individually detected network, which initialized by ResNet101, is trained first Suggest that network, fixed shared convolutional layer only finely tune region and suggest the exclusive layer of network, then keep shared convolutional layer in region It is fixed, finely tune the full articulamentum of Fast R-CNN;The identical convolutional layer of two network shares constitutes a unified network.
The above-mentioned cardiovascular OCT image based on deep learning easily loses plaque detection system, including sequentially connected OCT shadow As acquiring unit, digital signal processing unit, data storage cell, testing result display unit;
OCT image capturing unit: image is transferred to system from OCT image documentation equipment by connection OCT image documentation equipment and this system In;
Digital signal processing unit: implementing entire detection algorithm, denoises including (1) to the original image that image documentation equipment is shot Extract the easy loss patch in area-of-interest and (2) positioning, identification OCT image;
Data storage cell: the original image of result and the image documentation equipment shooting to OCT Image detection is stored;
Testing result display unit: output test result, result figure show OCT image in easily lose patch position and Its probability.
Beneficial effects of the present invention are the cardiovascular easily loss spot of OCT marked using deep learning network and specialist The image of block data set magnanimity trains the algorithm that can accurately detect easily loss patch, realizes the whole deep learning of diagnosis Change, using the large volume data sets training deep learning network after expansion, realizes that picture is accurately divided, lesion accurately detects. The Faster R-CNN target detection frame detection speed that the present invention uses is exceedingly fast, the average picture inspection on GPU server Survey only needs 200ms.Solve the problems, such as that the time-consuming that patch is easily lost by doctor Artificial Diagnosis OCT image and misdiagnosis rate are higher.
Detailed description of the invention
Fig. 1 is the original OCT image schematic diagram under polar coordinate system.
Fig. 2 is the easy loss plaque detection method flow diagram based on deep learning.
Fig. 3 is that the present invention carries out saying for data augmentation to original OCT image data collection in such a way that scalloping deforms It is bright, wherein (a) original OCT image, (b) carries out the distortion of flag shape to original image (a), local expansion (c) is carried out to original image (a) Distortion, (d) carries out extruding distortion to original image (a).
Fig. 4 is the label figure (a) and original image (b) example of the training set production to full convolutional network used in step 2.
Fig. 5 is a kind of architecture diagram for full convolutional network U-net that detection method step 2 uses.
Fig. 6 is using the OCT striograph for only retaining area-of-interest after trained full convolutional network segmentation.
Fig. 7 is the target detection frame Faster R-CNN architecture diagram that the present invention uses.
Fig. 8 is the plaque location coordinate text examples marked by specialist.
Fig. 9 is the composition of the loss function used in Faster R-CNN detection framework figure of the invention.
Figure 10 is that detection block of the present invention merges and deletes schematic diagram.
Figure 11 is the detection final result figure of the easy loss plaque detection method and system based on deep learning.
Figure 12 is that the easy loss plaque detection system based on deep learning forms figure.
Figure 13 is the easy loss plaque detection method flow diagram based on deep learning.
Specific embodiment
Next specific embodiments of the present invention are described with reference to the accompanying drawings, make technology path of the invention, feature and excellent Point is more understandable.
Step 1: obtaining angiocarpy OCT image from OCT image documentation equipment, data augmentation is carried out to image data set.
Step 1-1 obtains 2000 cardiovascular OCT images from equipment, establishes image data set, wherein 1000 for containing The easily positive sample of loss patch, 1000 are the negative sample without easy loss patch.OCT raw video is as shown in Figure 1.
Step 1-2 carries out data augmentation to image data set referring to Fig. 2, is carried out using the method for scalloping to original image The distortions such as part expansion, contraction, torsion, corolla and the flag shape of appropriateness increase image data to 4N~10N.Specifically, originally Invention expands image data amount to original 4 times, obtains 8000 images.(a) in Fig. 2 (c), is respectively (d): one (b) Original OCT image is opened, the distortion of flag shape is carried out to original image, part expansion is carried out to original image and is distorted, extruding distortion is carried out to original image.
The algorithm flow chart of step 2 and step 3 deep learning method, in brief, step 2 are given referring to Fig. 3, Fig. 3 Area-of-interest, step 3 are denoised and extracted to original cardiovascular OCT image using a kind of full convolutional neural networks (U-net) It uses the OCT image handled through step 2 as input, is positioned using Faster R-CNN frame and identify the rapid wear in OCT image Lose patch.
Step 2: being denoised and extracted area-of-interest to cardiovascular OCT image with a kind of full convolutional neural networks.
Step 2-1 concentrates the training for choosing 5000 pictures as full convolutional network from the OCT image data by expanding Collection chooses 500 pictures as verifying collection from training set, randomly selects 500 conducts from remaining 3000 OCT images Test set.Referring to Fig. 4 (a), label figure is opened for the OCT making video one in every training set, only retains area-of-interest, removes Unrelated conduit, background, corner, Fig. 4 (b) are original image corresponding with Fig. 4 (a).
Referring to Fig. 5, Fig. 5 is a kind of framework for full convolutional network U-net that the present invention uses.The full convolutional neural networks by The constricted path in left side and the extensions path composition on right side, it is U-shaped integral into one.Specifically, which carries out 4 to input picture Secondary down-sampling constitutes left side constricted path, carries out 4 up-samplings to image and constitutes right extension path.Wherein, constricted path by The convolutional layer that the convolution kernel size of two repeated applications is 3*3 forms, and each convolutional layer follows an amendment linear unit (rectified linear unit, ReLU).Specifically, the present invention takes A=2, carries out a down-sampling after every convolution 2 times (down sampling).The maximum pond layer (max pooling) for the 2*2 that down-sampling operation is 2 by step-length is completed, under each Sampling step doubles feature number of active lanes.Repeated application two convolution kernel sizes in right extension path are the convolutional layer of 3*3, often One all follows an amendment linear unit, is once up-sampled after every convolution 2 times, and up-sampling (up sampling) makes spy The quantity in sign channel halves.The convolution kernel size of right extension path the last layer is 1*1, converts certain depth for characteristic pattern As a result, the pixel by original OCT image specifically, in the present embodiment is needed to be divided into 2 classifications, then certain depth is equal to B= 2。
Particularly, be illustrated to the full convolutional network U-net of present invention training: setting momentum=0.90 in this way may be used To use GPU memory to large extent, so that a large amount of former network sample for training determines in current optimizer more Newly.The last layer introduces w using intersection entropy function and softmax in order to keep certain pixels more important in formula (x).It is estimated to each mark image to have calculated a weight map, carry out the different frequency that compensation training concentrates every class pixel, makes net Network more focuses on learning the partitioning boundary of area-of-interest (RoI).
Step 2-2, after step 2-1 trains full convolutional network U-net, data set 8000 opens image and uses U-net It carries out image denoising and extracts area-of-interest, Fig. 6 is provided two anticipatory remarks invention and handled using trained full convolutional network U-net The result figure obtained after original OCT image.
Step 3: being positioned and identified in cardiovascular OCT image with Faster R-CNN target detection frame and easily lose patch.
Referring to Fig. 7, Fig. 7 is the target detection frame Faster R-CNN flow chart that the present invention uses.FasterR-CNN is calculated Method is made of two big modules: (1) network (Region Proposal Network, RPN) is suggested in region, (2) Fast R-CNN inspection Survey grid network.
Step 3-1: data preparation first is carried out for the training of Faster R-CNN.The input picture of Faster R-CNN network The result figure obtained from second stage.As shown in figure 8, the corresponding patch region marked by specialist of each figure Coordinate position label.Specifically, be illustrated to each data concrete meaning of label: first data indicates picture name, the Two data indicate that the figure belongs to positive sample there are two selectable value (0,1), 1, contain patch region at least one, 0 represents the figure For negative sample, patch region is free of.Begin from third data are split as the column pixel of the starting and ending in patch region in image. By taking 0006.png as an example, which is positive sample, contains patch region at two, first patch region starting column pixel is 1, knot Beam column pixel is 164;Second patch region starting column pixel is 688, and end column pixel is 720.Patch region column pixel is sat It is denoted as the reference standard (ground truth) for Faster R-CNN network detection block.
Step 3-2: suggesting that network extracts detection zone with region, it can be special with the convolution of entire detection network share full figure Sign, so that region suggests hardly taking time.Region suggests that network carries out feature extraction first, then generates candidate region, most Window classification and position refine are carried out afterwards.Feature extraction is carried out using deep learning network of network common on ImageNet, special Not, the present invention deep learning network ResNet101 best using current performance.Candidate region is generated specifically to this Each position of image considers that x kind ratio, y kind size amount to the candidate window of x*y size.Particularly, the present invention takes X=3, y=3, taking three kinds of sizes is { 1282, 2562, 5122, three kinds of ratios are { 1:1,1:2,2:1 }, carry out window classification and When the refine of position, classification layer exports the probability window recurrence that 3*3=9 candidate region on each position belongs to foreground and background The layer output each candidate region in each position, which corresponds to window, should translate the parameter of scaling.
Particularly, it in order to train region to suggest network, needs to distribute class label { target, non-mesh to each candidate region Mark }.For positive and negative label, target is equal to positive label, non-targeted to be equal to negative label;
The present invention provides following regulation:
Referring to Fig. 9, the multitask loss in Faster R-CNN is described.To the function of an image in FasterR-CNN Is defined as:
piThe probability of target is predicted as anchor;Ground truth label:
ti={ tx,ty,tw,thIt is a vector, indicate that 4 parametrizations of the bounding box bounding box of prediction are sat Mark;It is the coordinate vector of ground truth bounding box corresponding with positive anchor;It is two classes Other logarithm loss: It is Loss is returned, is usedIt calculates, R is smooth L1 function.This means only There is prospectJust there is recurrence to lose, other situations just do not have.Cls layers and reg layers of output is respectively by { pi} { uiComposition, this two respectively by NclsAnd NregAn and balance weight λ normalization.
Bounding box in Faster R-CNN is returned:
tx=(x-xa)/wa,ty=(y-ya)/ha,
tw=log (w/wa),th=log (h/ha),
Wherein, x, y, w, h are centre coordinate, width, the height of box:
Referring to Fig.1 0 (a), since feature extraction network extracts large number of candidate frame, have between each candidate frame very much Overlapping region realizes that detection block merges and deletion using non-maxima suppression method (NMS, non-maximum suppression). Specifically, the operation of non-maxima suppression method is as follows: the score of all candidate frames being sorted, best result and its corresponding frame are chosen. The candidate frame for being greater than 0.7 (IoU > 0.7) with the registration of top score candidate frame is all deleted, this top score time is only left Frame is selected, as shown in Figure 10 (b).Similarly, settable by registration about certain threshold value x or probability about certain threshold at final test side The prediction block of value P is merged using non-maxima suppression method.Non-maxima suppression method will not influence final Detection accuracy, But significantly reduce the quantity of Suggestion box.
After region suggests that network (RPN) extraction obtains candidate region, final detection is realized using Fast R-CNN module And identification, the convolutional layer that network is suggested in region and Fast R-CNN shares ResNet101 is made by training.Specific training process It is as follows:
Suggest the Suggestion box that network generates using region, one is individually detected network, the inspection by Fast R-CNN training Survey grid network is initialized by ResNet101, and region is trained to suggest that network, fixed shared convolutional layer only finely tune area first The exclusive layer of network is suggested in domain, and shared convolutional layer is then kept to fix, and finely tunes the full articulamentum of Fast R-CNN.In this way, two The convolutional layer of a network share ResNet101 constitutes a unified network.
1 (a) and Figure 11 (b) referring to Fig.1, provides two the present embodiment testing result figures, it can be seen that result figure is clearly marked It is good to outpour the easily position of loss patch and probability, detection effect.
Referring to Fig.1 2, provide the framework of the easy loss plaque detection device based on deep learning.The detection device is by OCT shadow As obtaining module, digital signal processing module, data memory module and testing result display module totally four module compositions.
OCT image acquiring module includes three units: probe unit, probe interface unit and optical signal processing unit, OCT Image acquiring module is used to obtain the image of patient vessel's inner wall.
Digital signal processing module: the digital signal processing module is used to detect the easy loss in the OCT image obtained Patch.OCT image to be detected is handled by above-mentioned second stage and the deep learning method of phase III, original image is gone in realization It makes an uproar, extract area-of-interest and detect the position and the probability that easily lose patch.
Data memory module: the memory module is used to store the OCT image and OCT of OCT image acquiring module acquisition The testing result of image.
Testing result display module: the testing result display module is for showing that patient OCT image easily loses patch Testing result.
The present embodiment carries out data augmentation to the OCT image obtained from OCT equipment, devises the calculation of two stages deep learning Method, and the easy loss plaque location label of specialist mark is combined, so that trained deep learning network exact divides OCT Equipment shooting Cardiovascular imaging detects whether to will test containing easy loss patch and its position and probability, last detection system Data storage simultaneously detects output result.This embodiment achieves the deep learning of diagnosis process whole process, accuracy in detection is high, fast Degree is fast, and an OCT image is detected on GPU server averagely only needs 200ms, is truly realized real-time detection, has preferable Clinical value.

Claims (6)

1. the cardiovascular OCT image based on deep learning easily loses plaque detection method, which is characterized in that comprise the following steps that
Step 1: obtaining angiocarpy OCT image from OCT image documentation equipment, data augmentation is carried out to image data set;
Step 1-1 obtains the data set being made of m OCT angiocardiograms, including the positive sample containing easy loss patch This and the negative sample without easy loss patch, positive sample quantity are greater than negative sample quantity, and all positive samples are by specialist mark Outpour the specific location of easily loss patch;
Step 1-2 carries out data augmentation to the data set of m OCT angiocardiogram compositions, to obtain 4m~10m samples; The data augmentation mode includes the part expansion that appropriateness is carried out to original image, contraction, torsion, corolla and the distortion of flag shape;
Step 2: being denoised and extracted area-of-interest to cardiovascular OCT image with full convolutional neural networks;
Data set is divided into training set, verifying collection and test set, training set and collects each image corresponding one with verifying by step 2-1 Label figure is opened, the label figure is to remove background, conduit redundance, only retains interested region (RoI);Test set does not have Label figure;By training set, the verifying collection input full convolutional network training, with the performance of test set test network;
After the full convolutional neural networks of step 2-2, step 2-1 show well on test set, all images of data set are made Area-of-interest is denoised and extracted with the full convolutional neural networks;
Step 3: being positioned and identified in cardiovascular OCT image with Faster R-CNN target detection frame and easily lose patch;
Training dataset image passes through full convolutional network processing described in step 2, the corresponding spot marked by specialist of every figure Block area coordinate location information;FasterR-CNN algorithm is made of two big modules: (1) network (Region is suggested in region Proposal Network, RPN), (2) Fast R-CNN detects network;
Step 3-1 suggests that network extracts detection zone using region, and region is suggested that network carries out feature extraction first, then given birth to At candidate region (anchor), window classification and position refine are finally carried out;
Step 3-2 suggests network for subsequent trained region, gives each candidate region distribution class label { target, non-targeted };To area Suggest that the label setting in network candidates region is described as follows in domain: target is equal to positive label, non-targeted to be equal to negative label;
Positive label: with the registration of any reference standard (ground truth) bounding box (bounding box) be greater than x (IoU > X) candidate region;
Negative label: it is less than the candidate region of (1-x) with the registration of all reference standard bounding boxs;
Realize that detection block merges and deletion using non-maxima suppression method;Specifically, the score of all candidate frames is sorted, is chosen Best result and its corresponding frame;Candidate frame with the registration of top score candidate frame greater than x (IoU > x) is all deleted, only It is left this top score candidate frame;After non-maxima suppression method, candidate region is ranked up, the top n after sorting is taken to examine It surveys;
Step 3-3 is realized finally after region suggests that network (RPN) extraction obtains candidate region using Fast R-CNN module Detection and identification make the convolutional layer that network is suggested in region and Fast R-CNN shares ResNet101 by training;
Step 4: system stores detection data, output test result;
To each OCT image of OCT image documentation equipment acquisition, mark can be obtained after step 2, the processing of 3 deep learning methods Outpour the output result that plaque region domain and its probability are easily lost on image.
2. the cardiovascular OCT image according to claim 1 based on deep learning easily loses plaque detection method, feature It is, the full convolutional network model framework that the step 2 uses: constricted path and right side of the full convolutional neural networks by left side Extensions path composition, it is U-shaped integral into one;To input picture carry out n times down-sampling constitute left side constricted path, to image into Row n times up-sampling constitutes right extension path;Wherein, the volume that constricted path is 3*3 by the convolution kernel size of two repeated applications Lamination composition, each convolutional layer follow an amendment linear unit (rectified linear unit, ReLU), every convolution A A down-sampling (down sampling), the maximum pond layer (max for the 2*2 that down-sampling operation is 2 by step-length are carried out after secondary Pooling it) completes, each down-sampling step doubles feature number of active lanes;Two convolution kernels of right extension path repeated application Size is the convolutional layer of 3*3, each follows an amendment linear unit, is once up-sampled after every convolution A times, above adopted Sample (up sampling) halves the quantity in feature channel;The convolution kernel size of right extension path the last layer is 1*1, will Characteristic pattern be converted into certain depth as a result, if the pixel of an image is divided into B classification, certain depth is equal to B.
3. the cardiovascular OCT image according to claim 1 or 2 based on deep learning easily loses plaque detection method, It is characterized in that, feature extraction is using deep learning network ResNet101 in step 3-1;Generating candidate region is to the figure Each position of picture considers that x kind ratio, y kind size amount to the candidate window of x*y size;Carry out window classification and position When setting refine, classification layer exports the probability that x*y candidate region on each position belongs to foreground and background;It is defeated that window returns layer The each candidate region in each position, which corresponds to window, out should translate the parameter of scaling.
4. the cardiovascular OCT image according to claim 1 or 2 based on deep learning easily loses plaque detection method, It is characterized in that, step 3-3, specific training process is as follows: suggesting the Suggestion box that network generates using region, by Fast R-CNN Training one individually detects network, which initialized by ResNet101, trains region to suggest net first Network, fixed shared convolutional layer only finely tune region and suggest the exclusive layer of network, then keep shared convolutional layer to fix, finely tune The full articulamentum of Fast R-CNN;The identical convolutional layer of two network shares constitutes a unified network.
5. the cardiovascular OCT image according to claim 3 based on deep learning easily loses plaque detection method, feature It is, step 3-3, specific training process is as follows: suggesting the Suggestion box that network generates using region, is trained by Fast R-CNN One is individually detected network, which initialized by ResNet101, trains region to suggest network first, Gu Surely shared convolutional layer only finely tunes region and suggests the exclusive layer of network, then keeps shared convolutional layer to fix, finely tune Fast The full articulamentum of R-CNN;The identical convolutional layer of two network shares constitutes a unified network.
6. using the detection system of any detection method of claim 1-5, which is characterized in that including sequentially connected OCT Image capturing unit, digital signal processing unit, data storage cell, testing result display unit;
OCT image capturing unit: image is transferred in system by connection OCT image documentation equipment and this system from OCT image documentation equipment;
Digital signal processing unit: implementing entire detection algorithm, extracts including (1) to the original image denoising that image documentation equipment is shot Easy loss patch in area-of-interest and (2) positioning, identification OCT image;
Data storage cell: the original image of result and the image documentation equipment shooting to OCT Image detection is stored;
Testing result display unit: output test result, result figure shows the position that patch is easily lost in OCT image and it is general Rate.
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