CN108717685A - A kind of method and system of enhancing image resolution ratio - Google Patents

A kind of method and system of enhancing image resolution ratio Download PDF

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CN108717685A
CN108717685A CN201810456228.XA CN201810456228A CN108717685A CN 108717685 A CN108717685 A CN 108717685A CN 201810456228 A CN201810456228 A CN 201810456228A CN 108717685 A CN108717685 A CN 108717685A
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image
hot spot
original image
point spread
spread function
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CN108717685B (en
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赵伟
张策
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Northwest University
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    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T3/00Geometric image transformations in the plane of the image
    • G06T3/40Scaling of whole images or parts thereof, e.g. expanding or contracting
    • G06T3/4053Scaling of whole images or parts thereof, e.g. expanding or contracting based on super-resolution, i.e. the output image resolution being higher than the sensor resolution
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T5/00Image enhancement or restoration
    • G06T5/70Denoising; Smoothing
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T5/00Image enhancement or restoration
    • G06T5/73Deblurring; Sharpening

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  • General Physics & Mathematics (AREA)
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  • Theoretical Computer Science (AREA)
  • Microscoopes, Condenser (AREA)
  • Investigating, Analyzing Materials By Fluorescence Or Luminescence (AREA)

Abstract

The present invention provides a kind of method and system of enhancing image resolution ratio, wherein the method includes:Pending original image is obtained, and in the case where keeping the original image visual field size constant, the original image is extended to the pixel of specified quantity;Based on selected wavelet function, two-dimensional discrete wavelet conversion carried out to the image after expansion, and removes picture noise and extracts during the two-dimensional discrete wavelet conversion and specify image;Deconvolution processing is carried out to the specified image of extraction using preset algorithm, to obtain the image of resolution ratio enhancing.Technical solution provided by the present application can realize the inhibition to noise information while promoting image resolution ratio.

Description

A kind of method and system of enhancing image resolution ratio
Technical field
The present invention relates to technical field of image processing, more particularly to a kind of method and system of enhancing image resolution ratio.
Background technology
Deconvolution techniques be it is a kind of it is widely applied, without to target carry out in advance identification and signature analysis, have compared with The image processing techniques of high universality can significantly improve the resolution ratio of imaging technique, be more than optical system used to obtain The high-definition picture of system resolution ratio itself provides more sample informations for researcher.
Currently, the difference of difference or realization method based on algorithm, there are many kinds of types for deconvolution techniques, including most pass through The Lucy-Richardson methods of allusion quotation and more flexible blind methods.The realization of Lucy-Richardson methods needs Based on the accurate expection of the point spread function (Point Spread Function, PSF) to optical system, to realize to mesh The deconvolution processing of logo image.The latter is not needing the accurate expection to the PSF of optical system for the former, only needs Substantially to a range, blind algorithms that can go to approach actual PSF by built-in iterative algorithm to realize to target figure The analysis of deconvoluting of picture.
However, deconvolution techniques used at present, including Lucy-Richardson and blind methods, exist excessive The negative factor of processing.It is, deconvolution techniques while removing noise, improving resolution ratio, can additionally introduce a large amount of Information introduces a large amount of undulatory patterns while removing random noise and shotnoise (shot noise).This is to image The identification of middle effective information judges and the promotion of picture quality has apparent negative effect.
Invention content
The application's is designed to provide a kind of method and system of enhancing image resolution ratio, can promote image resolution While rate, the inhibition to noise information is realized.
To achieve the above object, the application provides a kind of method of enhancing image resolution ratio, the method includes:
Pending original image is obtained, and in the case where keeping the original image visual field size constant, it will be described Original image extends to the pixel of specified quantity;
Based on selected wavelet function, two-dimensional discrete wavelet conversion is carried out to the image after expansion, and small from two-dimensional discrete Noise is removed during wave conversion and is extracted specifies image;
Deconvolution processing is carried out to the specified image of extraction using preset algorithm, to obtain the figure of resolution ratio enhancing Picture.
Further, obtaining pending original image includes:
It imports the text data of the original image or imports the original image for specifying picture format.
Further, the pixel for the original image being extended to specified quantity includes:
According to the total quantity of the current pixel of the original image, determine with the total quantity of the current pixel most The n times exponential value of close 2, described immediate 2 n times exponential value are more than or equal to the sum of the current pixel Amount, and the N is integer;
The quantity for the pixel that the original image includes is extended to described immediate 2 n times exponential value.
Further, specified image is extracted from the result of two-dimensional discrete wavelet conversion includes:
Signal from the result of two-dimensional discrete wavelet conversion corresponding to scale of the extraction with peak signal energy carries out Reduction, and the signal corresponding to smallest dimension signal and scale with least energy is eliminated, it is small from two-dimensional discrete to obtain Noise and the specified image of extraction are removed during wave conversion.
Further, carrying out deconvolution processing to the specified image of extraction includes:
The point spread function of the fluorescence hot spot of calculating optical system, and based on the point spread function to the finger of extraction Determine image and carries out deconvolution processing.
Further, the point spread function of calculating optical system includes:
If the unknown parameters of the fluorescence hot spot of the optical system, by the number for inputting microscope types, microcobjective It is worth aperture and medium refraction index, and theoretical based on microscopical ideal hot spot, it is assumed that incident light is collimated light beam and no polarization, knot Gaussian Profile is closed, the point spread function distribution of fluorescence hot spot is calculated;
Further, the point spread function of calculating optical system includes:
If the parameter of the optical system is it is known that by the wavelength of laser, polarization state, the numerical aperture of microcobjective and medium Refractive index inputs hot spot simulation program, using numerical simulation, calculates different refractivity, numerical aperture, optical maser wavelength, polarization state Under, the point spread function of laser is distributed, and calculates the point spread function distribution of fluorescence hot spot in turn.
To achieve the above object, the application also provides a kind of system of enhancing image resolution ratio, the system comprises:
Image expansion unit for obtaining pending original image, and is keeping the original image visual field size not In the case of change, the original image is extended to the pixel of specified quantity;
Wavelet transform unit, for based on selected wavelet function, 2-d discrete wavelet change to be carried out to the image after expansion It changes, and removes noise during the two-dimensional discrete wavelet conversion and extract and specify image;
Deconvolution processing unit, for carrying out deconvolution processing to the specified image of extraction using preset algorithm, with Obtain the image of resolution ratio enhancing.
Further, the deconvolution processing unit includes:
Point spread function calculating module, the point spread function of the fluorescence hot spot for calculating optical system, and based on described Point spread function carries out deconvolution processing to the specified image of extraction.
Further, the point spread function calculating module includes:
Unknown parameters processing module, it is aobvious by inputting if the unknown parameters of the fluorescence hot spot for the optical system Micro mirror type, the numerical aperture of microcobjective and medium refraction index, and it is theoretical based on microscopical ideal hot spot, it is assumed that incident light For collimated light beam and no polarization the point spread function distribution of fluorescence hot spot is calculated in conjunction with Gaussian Profile;
Parameter known treatment module, if the parameter for the optical system is it is known that by the wavelength of laser, polarization state, show The numerical aperture and medium refraction index of speck mirror input hot spot simulation program, using numerical simulation, calculate different refractivity, numerical value Under aperture, optical maser wavelength, polarization state, the point spread function of laser is distributed, and calculates the point spread function of fluorescence hot spot in turn Distribution.
Therefore in the present invention, by the way that two-dimentional (2D) discrete wavelet analytical technology is combined with the methods of deconvoluting, Pre-treatment is carried out to image with the analysis of 2D discrete wavelets, and then analysis of deconvoluting is carried out to image using the methods of deconvoluting again, Finally it is aided with non-linear sharpening, to realize the very big inhibition to noise and be obviously improved to image resolution ratio.With existing skill Art is compared, and the present invention at least has following advantageous effect:
1, noise reduction is extremely notable, and signal-to-noise ratio is high;
2, it can be obviously improved to graininess, point plaque-like, the resolution ratio of circle and Similar Round Object;
3, with strong points:It is analyzed by 2D discrete wavelets, sample is effectively extracted, in conjunction with deconvolution algorithm, improved The clarity and resolution ratio of sample;
4, applied widely:Suitable for different wave length, the derived techniques of different fluorescent dye, different lens systems Post processing of image, including inverted fluorescence microscope, Laser Scanning Confocal Microscope, stimulated radiation loss microscope etc..
Other features and advantages of the present invention will be illustrated in the following description, also, partly becomes from specification It obtains it is clear that understand through the implementation of the invention.The purpose of the present invention and other advantages can be by the explanations write Specifically noted structure is realized and is obtained in book, claims and attached drawing.
Below by drawings and examples, technical scheme of the present invention will be described in further detail.
Description of the drawings
Attached drawing is used to provide further understanding of the present invention, and a part for constitution instruction, the reality with the present invention It applies example to be used to explain the present invention together, not be construed as limiting the invention.In the accompanying drawings:
Fig. 1 is the method flow diagram for enhancing image resolution ratio in the embodiment of the present invention;
Fig. 2 is the method flow diagram that PSF is calculated in the embodiment of the present invention;
Fig. 3 (a) is the original image in the present invention the first application example;
Fig. 3 (b) is treated image in the present invention the first application example;
Fig. 4 (a) is the original image in the present invention the second application example;
Fig. 4 (b) is treated image in the present invention the second application example;
Fig. 5 (a) is the original image in third application example of the present invention;
Fig. 5 (b) is treated image in third application example of the present invention.
Specific implementation mode
Hereinafter, preferred embodiments of the present invention will be described with reference to the accompanying drawings, it should be understood that preferred reality described herein Apply example only for the purpose of illustrating and explaining the present invention and is not intended to limit the present invention.
Referring to Fig. 1, the application provides a kind of method of enhancing image resolution ratio, the method includes:
S1:Pending original image is obtained, and in the case where keeping the original image visual field size constant, by institute State the pixel that original image extends to specified quantity;
S2:Based on selected wavelet function, two-dimensional discrete wavelet conversion carried out to the image after expansion, and from two-dimensional discrete Noise is removed during wavelet transformation and is extracted specifies image;
S3:Deconvolution processing is carried out to the specified image of extraction using preset algorithm, to obtain resolution ratio enhancing Image.
In the present embodiment, obtaining pending original image includes:
It imports the text data of the original image or imports the original image for specifying picture format.
In the present embodiment, the pixel for the original image being extended to specified quantity includes:
According to the total quantity of the current pixel of the original image, determine with the total quantity of the current pixel most The n times exponential value of close 2, described immediate 2 n times exponential value are more than or equal to the sum of the current pixel Amount, and the N is integer;
The quantity for the pixel that the original image includes is extended to described immediate 2 n times exponential value.
In the present embodiment, specified image is extracted from the result of two-dimensional discrete wavelet conversion includes:
Signal from the result of two-dimensional discrete wavelet conversion corresponding to scale of the extraction with peak signal energy carries out Reduction, and the signal corresponding to smallest dimension signal and scale with least energy is eliminated, it is small from two-dimensional discrete to obtain Noise and the specified image of extraction are removed during wave conversion.
In the present embodiment, carrying out deconvolution processing to the specified image of extraction includes:
The point spread function of the fluorescence hot spot of calculating optical system, and based on the point spread function to the finger of extraction Determine image and carries out deconvolution processing.
In the present embodiment, the point spread function of the fluorescence hot spot of calculating optical system includes:
If the unknown parameters of the fluorescence hot spot of the optical system, by the number for inputting microscope types, microcobjective It is worth aperture and medium refraction index, and theoretical based on microscopical ideal hot spot, it is assumed that incident light is collimated light beam and no polarization, knot Gaussian Profile is closed, the point spread function distribution of fluorescence hot spot is calculated;
In the present embodiment, the point spread function of the fluorescence hot spot of calculating optical system includes:
If the parameter of the optical system is it is known that by the wavelength of laser, polarization state, the numerical aperture of microcobjective and medium Refractive index inputs hot spot simulation program, using numerical simulation, calculates different refractivity, numerical aperture, optical maser wavelength, polarization state Under, the point spread function of laser is distributed, and calculates the point spread function distribution of fluorescence hot spot in turn.
In a practical application scene, the technical solution of the application can turn to software with product, this software is for promotion The resolution ratio of picture system and develop, developing instrument be Matlab softwares.This software includes mainly image expansion, 2D discrete wavelets 4 parts such as analysis, the image procossing based on deconvolution method and non-linear sharpening are constituted.
First, original image is read in from data file.Data file can be Document type data file, can also be Or the image file of .GIF formats .GIFf.
Then, original image is expanded.Since the n times power that discrete wavelet is generally basede on 2 carries out, thus need former Beginning image spreading to immediate 2 n times power is counted.Such as original image multiplies 100 pixels for 100.It is inserted by non-linear Gauss Value is extended, and in the case where not influencing original image visual field size, obtains 128 images for multiplying 128 pixels.
In turn, by selecting different wavelet functions (such as db3), discrete wavelet processing is carried out to the image after expansion, The signal of extraction energy out to out is restored, and eliminates the corresponding noise of energy smallest dimension, discrete small to obtain 2D The image of wave extraction.
After the image for obtaining the extraction of 2D discrete wavelets, further deconvolution processing is carried out to image.It is built-in in this software Four kinds of image algorithms, respectively Lucy-Richardson algorithms, Blind algorithms, regularized filter and Wiener Filter algorithms.
Deconvolution method is dependent on the estimation or prediction to optical system fluorescence hot spot PSF.This program provides two kinds of moulds Block estimates the PSF of the fluorescence hot spot of optical system, and by taking copolymerization is burnt and inverted fluorescence microscope as an example, specific flow is as schemed Shown in 2:
(1) if the unknown parameters of exciting light or the non-optical profession of operator, as shown in the right side of fig 2, it is only necessary to input Microscope types, the numerical aperture of microcobjective and medium refraction index, so it is theoretical based on microscopical ideal hot spot, it is assumed that enter It is that collimated light beam (infinity focus) and no polarization (or circular polarization state) calculate ideal fluorescence light in conjunction with Gaussian Profile to penetrate light Spot PSF distributions.
(2) if the parameter of exciting light it is known that and operator be familiar with basic optical principle, as shown on the left of Fig. 2, by light Wavelength, polarization state, the numerical aperture of microcobjective and medium refraction index input hot spot simulation program, using numerical simulation, calculate Under different refractivity, numerical aperture, optical maser wavelength, polarization state, the PSF of laser is distributed, and then calculates the PSF of fluorescence hot spot.
Microscopy Microscopy is lost for stimulated radiation, PSF function can also be by calculating exciting light and the exciting light that disappears PSF so that estimate to obtain in conjunction with a variety of inhibition function modes.PSF is updated in software, is calculated based on four kinds of images above-mentioned Method promotes the resolution ratio of image and reduces influence of noise, extracts true image information.Finally, it is further to promote image pair Than degree, we are handled image using the non-linear sharpening algorithm of index, the super-resolution image that ultimately generates that treated.
Below from multiple technique effects for illustrating the application using example:
Application example 1:
After being illustrated in fig. 3 shown below to apply the image processing method, the handling result of confocal images.In Fig. 3 (b) For the anodised aluminium porous structure of coated 102 fluorescent dyes of Coumarin in surface, the fluorescence speck in figure is (such as arrow institute Show) by the fluorescent dye that is full of in the hole of the anodised aluminium of unprocessed mistake, also represent the structure in anodised aluminium hole. These fluorescence hot spots are influenced by noise of detector and optical diffraction, it is difficult to effectively identify its exact position, size and shape.And After the software of the application, as shown in Fig. 3 (b), while retaining useful signal, making an uproar for image is not only greatly inhibited Sound, while greatly improving the resolution ratio to target.For example, in Fig. 3 (a), part shown in arrow is very fuzzy, and is linked to be It is a piece of, it is difficult to distinguish.By the processing of the software, as shown in the arrow in Fig. 3 (b), the image to join together is by clearly area It separates, and picture noise is minimum, the resolution ratio of original image is about 300nm, and the resolution ratio of treated image is more than 50nm。
Application example 2:
For the anodised aluminium porous structure of coated 102 fluorescent dyes of Coumarin in same surface, we utilize Stimulated radiation loss microscope has also carried out scanning analysis to it.Fig. 4 (a) is that microscopical original scan figure is lost in stimulated radiation Picture, although resolution ratio is promoted relative to Laser Scanning Confocal Microscope, noise is equally serious, it is difficult to effectively identify its accurate position It sets, size and shape.And by the software of the application, as shown in Fig. 4 (b), while retaining useful signal, not only greatly The noise of image is inhibited, while greatly improving the resolution ratio to target.The structure that cannot be distinguished in many Fig. 3 (b), It can be distinguished in Fig. 4 (b), the resolution ratio of treated image is more than 40nm.
Application example 3:
Fig. 5 show the comparison before and after the processing of the inverted fluorescence microscope image of the cell of GFP dyeing.Fig. 5 (a) is dyeing The original image of cell afterwards, it can be seen that the ambient noise of cell membrane produces seriously observation fluorescence speck (shown in arrow) Negative effect so that image is very fuzzy.And in Fig. 5 (b), not only the bulk background of cell membrane fractions is successfully removed, Meanwhile as shown by arrows, the spatial resolution of sample is greatly promoted.
The application also provides a kind of system of enhancing image resolution ratio, the system comprises:
Image expansion unit for obtaining pending original image, and is keeping the original image visual field size not In the case of change, the original image is extended to the pixel of specified quantity;
Wavelet transform unit, for based on selected wavelet function, 2-d discrete wavelet change to be carried out to the image after expansion It changes, and removes noise during the two-dimensional discrete wavelet conversion and extract and specify image;
Deconvolution processing unit, for carrying out deconvolution processing to the specified image of extraction using preset algorithm, with Obtain the image of resolution ratio enhancing.
In the present embodiment, the deconvolution processing unit includes:
Point spread function calculating module, the point spread function of the fluorescence hot spot for calculating optical system, and based on described Point spread function carries out deconvolution processing to the specified image of extraction.
In the present embodiment, the point spread function calculating module includes:
Unknown parameters processing module, it is aobvious by inputting if the unknown parameters of the fluorescence hot spot for the optical system Micro mirror type, the numerical aperture of microcobjective and medium refraction index, and it is theoretical based on microscopical ideal hot spot, it is assumed that incident light For collimated light beam and no polarization the point spread function distribution of fluorescence hot spot is calculated in conjunction with Gaussian Profile;
Parameter known treatment module, if the parameter for the optical system is it is known that by the wavelength of laser, polarization state, show The numerical aperture and medium refraction index of speck mirror input hot spot simulation program, using numerical simulation, calculate different refractivity, numerical value Under aperture, optical maser wavelength, polarization state, the point spread function of laser is distributed, and calculates the point spread function of fluorescence hot spot in turn Distribution.
Therefore in the present invention, by the way that two-dimentional (2D) discrete wavelet analytical technology is combined with the methods of deconvoluting, Pre-treatment is carried out to image with the analysis of 2D discrete wavelets, and then analysis of deconvoluting is carried out to image using the methods of deconvoluting again, Finally it is aided with non-linear sharpening, to realize the very big inhibition to noise and be obviously improved to image resolution ratio.With existing skill Art is compared, and the present invention at least has following advantageous effect:
1, noise reduction is extremely notable, and signal-to-noise ratio is high;
2, it can be obviously improved to graininess, point plaque-like, the resolution ratio of circle and Similar Round Object;
3, with strong points:It is analyzed by 2D discrete wavelets, sample is effectively extracted, in conjunction with deconvolution algorithm, improved The clarity and resolution ratio of sample;
4, applied widely:Suitable for different wave length, the derived techniques of different fluorescent dye, different lens systems Post processing of image, including inverted fluorescence microscope, Laser Scanning Confocal Microscope, stimulated radiation loss microscope etc..
Obviously, various changes and modifications can be made to the invention without departing from essence of the invention by those skilled in the art God and range.In this way, if these modifications and changes of the present invention belongs to the range of the claims in the present invention and its equivalent technologies Within, then the present invention is also intended to include these modifications and variations.

Claims (10)

1. a kind of method of enhancing image resolution ratio, which is characterized in that the method includes:
Pending original image is obtained, and in the case where keeping the original image visual field size constant, it will be described original Image extends to the pixel of specified quantity;
Based on selected wavelet function, two-dimensional discrete wavelet conversion is carried out to the image after expansion, and become from 2-d discrete wavelet Noise is removed during changing and is extracted specifies image;
Deconvolution processing is carried out to the specified image of extraction using preset algorithm, to obtain the image of resolution ratio enhancing.
2. according to the method described in claim 1, it is characterized in that, obtaining pending original image and including:
It imports the text data of the original image or imports the original image for specifying picture format.
3. according to the method described in claim 1, it is characterized in that, the original image to be extended to the pixel of specified quantity Including:
According to the total quantity of the current pixel of the original image, determination is closest with the total quantity of the current pixel 2 n times exponential value, described immediate 2 n times exponential value is more than or equal to the total quantity of the current pixel, And the N is integer;
The quantity for the pixel that the original image includes is extended to described immediate 2 n times exponential value.
4. according to the method described in claim 1, it is characterized in that, extracting specified figure from the result of two-dimensional discrete wavelet conversion As including:
Signal from the result of two-dimensional discrete wavelet conversion corresponding to scale of the extraction with peak signal energy is restored, And the signal corresponding to smallest dimension signal and scale with least energy is eliminated, to obtain from two-dimensional discrete wavelet conversion During remove the specified image of noise and extraction.
5. according to the method described in claim 1, it is characterized in that, the specified image to extraction carries out deconvolution processing packet It includes:
The point spread function of the fluorescence hot spot of calculating optical system, and based on the point spread function to the specified figure of extraction As carrying out deconvolution processing.
6. according to the method described in claim 5, it is characterized in that, the point spread function packet of the fluorescence hot spot of calculating optical system It includes:
If the unknown parameters of the fluorescence hot spot of the optical system, by the numerical aperture for inputting microscope types, microcobjective Diameter and medium refraction index, and it is theoretical based on microscopical ideal hot spot, it is assumed that and incident light is collimated light beam and no polarization, in conjunction with height This distribution calculates the point spread function distribution of fluorescence hot spot.
7. according to the method described in claim 5, it is characterized in that, the point spread function packet of the fluorescence hot spot of calculating optical system It includes:
If the parameter of the optical system is it is known that by the wavelength of laser, polarization state, the numerical aperture of microcobjective and medium refraction Rate inputs hot spot simulation program, using numerical simulation, calculates under different refractivity, numerical aperture, optical maser wavelength, polarization state, The point spread function of laser is distributed, and calculates the point spread function distribution of fluorescence hot spot in turn.
8. a kind of system of enhancing image resolution ratio, which is characterized in that the system comprises:
Image expansion unit for obtaining pending original image, and is keeping the original image visual field size constant In the case of, the original image is extended to the pixel of specified quantity;
Wavelet transform unit, for based on selected wavelet function, two-dimensional discrete wavelet conversion to be carried out to the image after expansion, and Noise is removed during the two-dimensional discrete wavelet conversion and is extracted specifies image;
Deconvolution processing unit, for carrying out deconvolution processing to the specified image of extraction using preset algorithm, to obtain The image of resolution ratio enhancing.
9. system according to claim 8, which is characterized in that the deconvolution processing unit includes:
Point spread function calculating module, the point spread function of the fluorescence hot spot for calculating optical system, and expanded based on the point The specified image for dissipating function pair extraction carries out deconvolution processing.
10. system according to claim 9, which is characterized in that the point spread function calculating module includes:
Unknown parameters processing module, if the unknown parameters of the fluorescence hot spot for the optical system, by inputting microscope Type, the numerical aperture of microcobjective and medium refraction index, and it is theoretical based on microscopical ideal hot spot, it is assumed that subject to incident light Collimated optical beam and no polarization calculate the point spread function distribution of fluorescence hot spot in conjunction with Gaussian Profile;
Parameter known treatment module, if the parameter for the optical system is it is known that by the wavelength of laser, polarization state, micro- object The numerical aperture and medium refraction index of mirror input hot spot simulation program, using numerical simulation, calculate different refractivity, numerical aperture Under diameter, optical maser wavelength, polarization state, the point spread function of laser is distributed, and calculates the point spread function point of fluorescence hot spot in turn Cloth.
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