CN107649504A - A kind of method of resistance gene contamination in repairing and treating soil - Google Patents
A kind of method of resistance gene contamination in repairing and treating soil Download PDFInfo
- Publication number
- CN107649504A CN107649504A CN201710983680.7A CN201710983680A CN107649504A CN 107649504 A CN107649504 A CN 107649504A CN 201710983680 A CN201710983680 A CN 201710983680A CN 107649504 A CN107649504 A CN 107649504A
- Authority
- CN
- China
- Prior art keywords
- soil
- azolla imbricata
- gene
- repairing
- antibiotic
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 239000002689 soil Substances 0.000 title claims abstract description 85
- 108090000623 proteins and genes Proteins 0.000 title claims abstract description 54
- 238000000034 method Methods 0.000 title claims abstract description 22
- 238000011109 contamination Methods 0.000 title claims abstract description 11
- 241000351595 Azolla imbricata Species 0.000 claims abstract description 36
- 244000052909 Dioscorea esculenta Species 0.000 claims description 5
- 230000002093 peripheral effect Effects 0.000 claims description 2
- 239000002023 wood Substances 0.000 claims 1
- 230000003115 biocidal effect Effects 0.000 abstract description 22
- 238000005516 engineering process Methods 0.000 abstract description 13
- 229910001385 heavy metal Inorganic materials 0.000 abstract description 13
- 244000144977 poultry Species 0.000 abstract description 8
- 108010020764 Transposases Proteins 0.000 abstract description 7
- 244000144972 livestock Species 0.000 abstract description 6
- 244000005700 microbiome Species 0.000 abstract description 5
- 229910052751 metal Inorganic materials 0.000 abstract description 4
- 239000002184 metal Substances 0.000 abstract description 4
- 230000001684 chronic effect Effects 0.000 abstract description 3
- 230000002262 irrigation Effects 0.000 abstract description 2
- 238000003973 irrigation Methods 0.000 abstract description 2
- 239000010865 sewage Substances 0.000 abstract description 2
- 239000000523 sample Substances 0.000 description 39
- 241000196324 Embryophyta Species 0.000 description 9
- 241001672694 Citrus reticulata Species 0.000 description 8
- 238000004458 analytical method Methods 0.000 description 7
- 238000012360 testing method Methods 0.000 description 7
- 108020004465 16S ribosomal RNA Proteins 0.000 description 6
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 6
- 108020004414 DNA Proteins 0.000 description 6
- 238000005070 sampling Methods 0.000 description 6
- 241000894006 Bacteria Species 0.000 description 5
- 238000001514 detection method Methods 0.000 description 4
- 239000005416 organic matter Substances 0.000 description 4
- 238000003753 real-time PCR Methods 0.000 description 4
- 241000894007 species Species 0.000 description 4
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 4
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 3
- 229910052793 cadmium Inorganic materials 0.000 description 3
- 229910052802 copper Inorganic materials 0.000 description 3
- 239000000284 extract Substances 0.000 description 3
- 210000003608 fece Anatomy 0.000 description 3
- 229910052745 lead Inorganic materials 0.000 description 3
- 230000000813 microbial effect Effects 0.000 description 3
- 239000000203 mixture Substances 0.000 description 3
- 229910052757 nitrogen Inorganic materials 0.000 description 3
- 238000009777 vacuum freeze-drying Methods 0.000 description 3
- 229910052725 zinc Inorganic materials 0.000 description 3
- CGNLCCVKSWNSDG-UHFFFAOYSA-N SYBR Green I Chemical compound CN(C)CCCN(CCC)C1=CC(C=C2N(C3=CC=CC=C3S2)C)=C2C=CC=CC2=[N+]1C1=CC=CC=C1 CGNLCCVKSWNSDG-UHFFFAOYSA-N 0.000 description 2
- 239000004098 Tetracycline Substances 0.000 description 2
- 239000003242 anti bacterial agent Substances 0.000 description 2
- 229940088710 antibiotic agent Drugs 0.000 description 2
- 239000003153 chemical reaction reagent Substances 0.000 description 2
- MYSWGUAQZAJSOK-UHFFFAOYSA-N ciprofloxacin Chemical compound C12=CC(N3CCNCC3)=C(F)C=C2C(=O)C(C(=O)O)=CN1C1CC1 MYSWGUAQZAJSOK-UHFFFAOYSA-N 0.000 description 2
- 238000007405 data analysis Methods 0.000 description 2
- 230000003247 decreasing effect Effects 0.000 description 2
- 238000009792 diffusion process Methods 0.000 description 2
- 230000000694 effects Effects 0.000 description 2
- 238000000605 extraction Methods 0.000 description 2
- 238000011049 filling Methods 0.000 description 2
- -1 lincolamycin Proteins 0.000 description 2
- 239000010871 livestock manure Substances 0.000 description 2
- 238000002156 mixing Methods 0.000 description 2
- 238000012986 modification Methods 0.000 description 2
- 230000004048 modification Effects 0.000 description 2
- 238000012545 processing Methods 0.000 description 2
- 230000000644 propagated effect Effects 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 239000006228 supernatant Substances 0.000 description 2
- 235000019364 tetracycline Nutrition 0.000 description 2
- 150000003522 tetracyclines Chemical class 0.000 description 2
- 238000012546 transfer Methods 0.000 description 2
- SPFYMRJSYKOXGV-UHFFFAOYSA-N Baytril Chemical compound C1CN(CC)CCN1C(C(=C1)F)=CC2=C1C(=O)C(C(O)=O)=CN2C1CC1 SPFYMRJSYKOXGV-UHFFFAOYSA-N 0.000 description 1
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 1
- 238000007400 DNA extraction Methods 0.000 description 1
- 238000007399 DNA isolation Methods 0.000 description 1
- 206010059866 Drug resistance Diseases 0.000 description 1
- 108020005210 Integrons Proteins 0.000 description 1
- 102000004882 Lipase Human genes 0.000 description 1
- 108090001060 Lipase Proteins 0.000 description 1
- 239000004367 Lipase Substances 0.000 description 1
- PNKYCIJJAAVDGK-UHFFFAOYSA-N N.[N+](=O)([O-])[O-].[Mg+2].[N+](=O)([O-])[O-] Chemical compound N.[N+](=O)([O-])[O-].[Mg+2].[N+](=O)([O-])[O-] PNKYCIJJAAVDGK-UHFFFAOYSA-N 0.000 description 1
- 241000184339 Nemophila maculata Species 0.000 description 1
- 239000004677 Nylon Substances 0.000 description 1
- 238000012408 PCR amplification Methods 0.000 description 1
- OAICVXFJPJFONN-UHFFFAOYSA-N Phosphorus Chemical compound [P] OAICVXFJPJFONN-UHFFFAOYSA-N 0.000 description 1
- 108010090804 Streptavidin Proteins 0.000 description 1
- 108010059993 Vancomycin Proteins 0.000 description 1
- KIPLYOUQVMMOHB-MXWBXKMOSA-L [Ca++].CN(C)[C@H]1[C@@H]2[C@@H](O)[C@H]3C(=C([O-])[C@]2(O)C(=O)C(C(N)=O)=C1O)C(=O)c1c(O)cccc1[C@@]3(C)O.CN(C)[C@H]1[C@@H]2[C@@H](O)[C@H]3C(=C([O-])[C@]2(O)C(=O)C(C(N)=O)=C1O)C(=O)c1c(O)cccc1[C@@]3(C)O Chemical compound [Ca++].CN(C)[C@H]1[C@@H]2[C@@H](O)[C@H]3C(=C([O-])[C@]2(O)C(=O)C(C(N)=O)=C1O)C(=O)c1c(O)cccc1[C@@]3(C)O.CN(C)[C@H]1[C@@H]2[C@@H](O)[C@H]3C(=C([O-])[C@]2(O)C(=O)C(C(N)=O)=C1O)C(=O)c1c(O)cccc1[C@@]3(C)O KIPLYOUQVMMOHB-MXWBXKMOSA-L 0.000 description 1
- 238000009825 accumulation Methods 0.000 description 1
- PBCJIPOGFJYBJE-UHFFFAOYSA-N acetonitrile;hydrate Chemical compound O.CC#N PBCJIPOGFJYBJE-UHFFFAOYSA-N 0.000 description 1
- 230000009471 action Effects 0.000 description 1
- 238000007605 air drying Methods 0.000 description 1
- 230000003321 amplification Effects 0.000 description 1
- 238000000137 annealing Methods 0.000 description 1
- 230000008485 antagonism Effects 0.000 description 1
- 238000001479 atomic absorption spectroscopy Methods 0.000 description 1
- 244000052616 bacterial pathogen Species 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 229910052799 carbon Inorganic materials 0.000 description 1
- 230000008859 change Effects 0.000 description 1
- 238000006243 chemical reaction Methods 0.000 description 1
- 229960005091 chloramphenicol Drugs 0.000 description 1
- WIIZWVCIJKGZOK-RKDXNWHRSA-N chloramphenicol Chemical compound ClC(Cl)C(=O)N[C@H](CO)[C@H](O)C1=CC=C([N+]([O-])=O)C=C1 WIIZWVCIJKGZOK-RKDXNWHRSA-N 0.000 description 1
- 229960003405 ciprofloxacin Drugs 0.000 description 1
- 239000002361 compost Substances 0.000 description 1
- 230000001143 conditioned effect Effects 0.000 description 1
- 239000013068 control sample Substances 0.000 description 1
- 230000001276 controlling effect Effects 0.000 description 1
- 238000007796 conventional method Methods 0.000 description 1
- 230000007423 decrease Effects 0.000 description 1
- 230000007547 defect Effects 0.000 description 1
- 230000007850 degeneration Effects 0.000 description 1
- 238000004925 denaturation Methods 0.000 description 1
- 230000036425 denaturation Effects 0.000 description 1
- 235000013399 edible fruits Nutrition 0.000 description 1
- 238000001962 electrophoresis Methods 0.000 description 1
- 239000003480 eluent Substances 0.000 description 1
- 229960000740 enrofloxacin Drugs 0.000 description 1
- 230000007613 environmental effect Effects 0.000 description 1
- 238000000855 fermentation Methods 0.000 description 1
- 230000004151 fermentation Effects 0.000 description 1
- 238000007667 floating Methods 0.000 description 1
- 239000012634 fragment Substances 0.000 description 1
- 230000002068 genetic effect Effects 0.000 description 1
- PCHJSUWPFVWCPO-UHFFFAOYSA-N gold Chemical compound [Au] PCHJSUWPFVWCPO-UHFFFAOYSA-N 0.000 description 1
- 229910052737 gold Inorganic materials 0.000 description 1
- 239000010931 gold Substances 0.000 description 1
- 229940076085 gold Drugs 0.000 description 1
- 238000010438 heat treatment Methods 0.000 description 1
- 238000012165 high-throughput sequencing Methods 0.000 description 1
- 244000052637 human pathogen Species 0.000 description 1
- 239000003621 irrigation water Substances 0.000 description 1
- 235000019421 lipase Nutrition 0.000 description 1
- 238000001294 liquid chromatography-tandem mass spectrometry Methods 0.000 description 1
- 238000011068 loading method Methods 0.000 description 1
- ZEKZLJVOYLTDKK-UHFFFAOYSA-N lomefloxacin Chemical compound FC1=C2N(CC)C=C(C(O)=O)C(=O)C2=CC(F)=C1N1CCNC(C)C1 ZEKZLJVOYLTDKK-UHFFFAOYSA-N 0.000 description 1
- 229960002422 lomefloxacin Drugs 0.000 description 1
- 239000003120 macrolide antibiotic agent Substances 0.000 description 1
- 238000011880 melting curve analysis Methods 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
- 230000002906 microbiologic effect Effects 0.000 description 1
- OGJPXUAPXNRGGI-UHFFFAOYSA-N norfloxacin Chemical compound C1=C2N(CC)C=C(C(O)=O)C(=O)C2=CC(F)=C1N1CCNCC1 OGJPXUAPXNRGGI-UHFFFAOYSA-N 0.000 description 1
- 229960001180 norfloxacin Drugs 0.000 description 1
- 238000002414 normal-phase solid-phase extraction Methods 0.000 description 1
- 235000015097 nutrients Nutrition 0.000 description 1
- 229920001778 nylon Polymers 0.000 description 1
- 239000002420 orchard Substances 0.000 description 1
- 230000002688 persistence Effects 0.000 description 1
- 229910052698 phosphorus Inorganic materials 0.000 description 1
- 239000011574 phosphorus Substances 0.000 description 1
- 239000013612 plasmid Substances 0.000 description 1
- 238000002203 pretreatment Methods 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 230000001902 propagating effect Effects 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 238000003908 quality control method Methods 0.000 description 1
- 238000011002 quantification Methods 0.000 description 1
- 238000004445 quantitative analysis Methods 0.000 description 1
- LISFMEBWQUVKPJ-UHFFFAOYSA-N quinolin-2-ol Chemical compound C1=CC=C2NC(=O)C=CC2=C1 LISFMEBWQUVKPJ-UHFFFAOYSA-N 0.000 description 1
- 238000011084 recovery Methods 0.000 description 1
- 238000004064 recycling Methods 0.000 description 1
- 239000012925 reference material Substances 0.000 description 1
- 239000013074 reference sample Substances 0.000 description 1
- 230000001105 regulatory effect Effects 0.000 description 1
- 238000005067 remediation Methods 0.000 description 1
- 230000008439 repair process Effects 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 230000004044 response Effects 0.000 description 1
- 238000012216 screening Methods 0.000 description 1
- 230000035945 sensitivity Effects 0.000 description 1
- 238000007873 sieving Methods 0.000 description 1
- 244000000000 soil microbiome Species 0.000 description 1
- 238000003900 soil pollution Methods 0.000 description 1
- 230000007480 spreading Effects 0.000 description 1
- 239000010421 standard material Substances 0.000 description 1
- 238000007619 statistical method Methods 0.000 description 1
- 230000001629 suppression Effects 0.000 description 1
- 229940063650 terramycin Drugs 0.000 description 1
- 101150004433 tetQ gene Proteins 0.000 description 1
- 229960002180 tetracycline Drugs 0.000 description 1
- 229930101283 tetracycline Natural products 0.000 description 1
- 229940040944 tetracyclines Drugs 0.000 description 1
- 101150097091 tnpA gene Proteins 0.000 description 1
- 238000002137 ultrasound extraction Methods 0.000 description 1
- 229960003165 vancomycin Drugs 0.000 description 1
- MYPYJXKWCTUITO-LYRMYLQWSA-N vancomycin Chemical compound O([C@@H]1[C@@H](O)[C@H](O)[C@@H](CO)O[C@H]1OC1=C2C=C3C=C1OC1=CC=C(C=C1Cl)[C@@H](O)[C@H](C(N[C@@H](CC(N)=O)C(=O)N[C@H]3C(=O)N[C@H]1C(=O)N[C@H](C(N[C@@H](C3=CC(O)=CC(O)=C3C=3C(O)=CC=C1C=3)C(O)=O)=O)[C@H](O)C1=CC=C(C(=C1)Cl)O2)=O)NC(=O)[C@@H](CC(C)C)NC)[C@H]1C[C@](C)(N)[C@H](O)[C@H](C)O1 MYPYJXKWCTUITO-LYRMYLQWSA-N 0.000 description 1
- MYPYJXKWCTUITO-UHFFFAOYSA-N vancomycin Natural products O1C(C(=C2)Cl)=CC=C2C(O)C(C(NC(C2=CC(O)=CC(O)=C2C=2C(O)=CC=C3C=2)C(O)=O)=O)NC(=O)C3NC(=O)C2NC(=O)C(CC(N)=O)NC(=O)C(NC(=O)C(CC(C)C)NC)C(O)C(C=C3Cl)=CC=C3OC3=CC2=CC1=C3OC1OC(CO)C(O)C(O)C1OC1CC(C)(N)C(O)C(C)O1 MYPYJXKWCTUITO-UHFFFAOYSA-N 0.000 description 1
- 230000005570 vertical transmission Effects 0.000 description 1
- 150000003952 β-lactams Chemical class 0.000 description 1
Classifications
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B09—DISPOSAL OF SOLID WASTE; RECLAMATION OF CONTAMINATED SOIL
- B09C—RECLAMATION OF CONTAMINATED SOIL
- B09C1/00—Reclamation of contaminated soil
- B09C1/10—Reclamation of contaminated soil microbiologically, biologically or by using enzymes
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B09—DISPOSAL OF SOLID WASTE; RECLAMATION OF CONTAMINATED SOIL
- B09C—RECLAMATION OF CONTAMINATED SOIL
- B09C1/00—Reclamation of contaminated soil
- B09C1/10—Reclamation of contaminated soil microbiologically, biologically or by using enzymes
- B09C1/105—Reclamation of contaminated soil microbiologically, biologically or by using enzymes using fungi or plants
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B09—DISPOSAL OF SOLID WASTE; RECLAMATION OF CONTAMINATED SOIL
- B09C—RECLAMATION OF CONTAMINATED SOIL
- B09C2101/00—In situ
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Mycology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- General Health & Medical Sciences (AREA)
- Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Biomedical Technology (AREA)
- Soil Sciences (AREA)
- Environmental & Geological Engineering (AREA)
- Botany (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
A kind of method of resistance gene contamination in repairing and treating soil, pass through Azolla imbricata phytoremediation chronic administration livestock and poultry muck and the soil of sewage irrigation, diversity of soil microorganism is added, promotes the degraded of antibiotic in soil, reduces soil available content of beary metal.Under the conditions of optimal dose Azolla imbricata phytoremediation, the content of antibiotic and available heavy metal declines 28.1% 44.8% and 46.8% 95.9% respectively in soil, and the quantity of resistant gene reduces 27.1%.Azolla imbricata phytoremediation technology can effectively control total resistant gene in soil, the relative abundance of transposase gene.Azolla imbricata phytoremediation technology is a kind of green technology method that can effectively administer heavy metal in soil, antibiotic and resistant gene combined pollution.The advantages that this method is simple to operate, easy to implement, cost is low, green, has broad application prospects.
Description
Technical field
Present invention relates particularly to technical field of soil remediation, and in particular to resistance gene contamination in a kind of repairing and treating soil
Method.
Background technology
Abuse of antibiotics and induce drug resistance pathogenic bacteria and caused what people were spread to antibiotic and resistant gene (ARGs)
Concern.ARGs persistence residual, and environmental hazard of the propagation than antibiotic in itself in varying environment medium are bigger.Contain
Antibiotic irrigation water can cause soil pollution, be the important sources of soil antibiotic as applying the muck containing antibiotic.Poultry
In poultry manure containing high-caliber antibiotic, heavy metal (selection index system is cooperateed between resistant gene), resistant microorganism and
Resistant gene, the influence during its recycling to environment are interesting issue at present.
Soil is the main place of feces of livestock and poultry consumption, is the main source of human pathogen's bacterium resistant gene.Using pig manure
It is that an important factor for influenceing resistance gene abundance in soil, resistance level of the edaphon to antibiotic can be dramatically increased.Heap
Fertile fermentation energy reduces the concentration of residual antibiotic in fresh livestock and poultry muck, and reduces its resistant gene content, has at present
The technology mode for reaching control resistant gene by regulating and controlling compost and propagating.A large amount of administrations of livestock and poultry muck, it is most likely that can cause
The resistant gene pollution of soil.Phytoremediation technology is a kind of inexpensive high effective green environmentally friendly technology, and how to utilize the skill
Art pollutes to administer the resistant gene of soil, not yet solves so far.Azolla imbricata is Filicineae Azolla imbricata section floating plant, in China
It is widely distributed, it is annual herb, the four seasons are in great numbers, and tillering ability is strong, and plant is short and small, network of roots life, and the accumulation of plant nitrogen is obvious, organic
Matter content is high, and purifying water effect is good.
The content of the invention
The defects of in order to overcome above-mentioned prior art to exist, it is dirty that the present invention provides resistant gene in a kind of repairing and treating soil
The method of dye, the degraded of antibiotic in soil is promoted, reduce soil available content of beary metal and resistant gene
Quantity is reduced.
The technical solution that the present invention uses is:The method of resistance gene contamination, described in a kind of repairing and treating soil
Restorative procedure be that, by filling fresh Azolla imbricata plant around tree root, the amount of described Azolla imbricata plant landfill is every
5-15kg Azolla imbricata plants are filled around tree root.
The depth of the described fresh Azolla imbricata plant of landfill is 5-10cm.
The described mode that fresh Azolla imbricata plant is filled around tree root is:Uniformly placed within one week in tree root full
The red plant in river is simultaneously buried.
Region of the described tree root peripheral region for the area centered on tree for 1.4m × 1.4m.
Described trees are Ou Ganshu.
The beneficial effects of the invention are as follows:The invention provides a kind of method of resistance gene contamination in repairing and treating soil,
By Azolla imbricata phytoremediation chronic administration livestock and poultry muck and the soil of sewage irrigation, diversity of soil microorganism is added,
The degraded of antibiotic in soil is promoted, reduces soil available content of beary metal.Repaiied in optimal dose Azolla imbricata plant
Under the conditions of multiple, the content of antibiotic and available heavy metal declines 28.1%-44.8% and 46.8%- respectively in soil
95.9%, and the quantity of resistant gene reduces 27.1%.Azolla imbricata phytoremediation technology can effectively control total resistance in soil
The relative abundance of gene, transposase gene.Azolla imbricata phytoremediation technology is that one kind can effectively administer heavy metal in soil, resist
Raw element and the green technology method of resistant gene combined pollution, this method is simple to operate, easy to implement, cost is low, green
The advantages that, have broad application prospects.
Embodiment
With reference to embodiment, the present invention will be described in detail, and embodiment is only the preferred embodiment of the present invention,
It is not limitation of the invention.
Method
Sample region overview
Sample is in three YangOu Gan gardens of Wenzhou City Ouhai District.Bowl mandarin orange is local characteristic fruit, three YangOu Gan gardens areas
About 1000 mu, a large amount of Xiaohegous are run through in mandarin orange garden, pollution of area source discharge in mandarin orange garden causes river seriously to pollute.Planting household directly utilizes
River recharge Gan Yuan, and chronic administration livestock and poultry muck.Along stream seining cultivation Azolla imbricata plant in mandarin orange garden, plant-micro- is utilized
Bio combined processing river, and salvage Azolla imbricata and be used to repair mandarin orange Orchard Soil.
Sampled point is set and sample collection
In April, 2016,18 Ou Ganshu of the same size are selected in three YangOu Gan gardens.With bowl mandarin orange under every bowl mandarin orange tree crown
Equal area (1.4m × 1.4m) sample is set centered on tree.In sample ground 10cm depths uniformly fill different fresh weights (5kg,
7.5kg, 10kg, 12.5kg, 15kg) Azolla imbricata plant, each amount of landfill repeats with setting 3 pieces of samples, totally 18 pieces, wherein 3
The individual sample for not filling Azolla imbricata, as control.After 45d, 15cm depths is taken by serpentine circuit five-spot in each sample ground
Soil, mixing are fitted into sterile sampling bag.According to plant amount of landfill order from low to high, by soil sample be designated as AS1, AS2, AS3,
AS4, AS5, control sample are designated as CS.The soil of collection removes plant roots and visible organic matter residuum.Each sampling is small by 5
Sample forms, and scene uniformly mixing.Sample loading ice chest is taken back into lab analysis.The fresh samples of 200g carry out physics and chemistry after air-drying sieving
Indexs measure;Progress vacuum freeze drying is stored in -80 DEG C after another 200g samples cross 2mm sieves, in case total genomic dna extracts,
For microorganism and Resistance gene analysis;Remaining sample is stored in -80 DEG C in case heavy metal and antibiotic detection.
Determination of physical and chemical properties
Physiochemical properties of soil determines according to soil agrochemistry conventional method.
Sample antibiotic determines
Soil sample crushed the standby survey of 60 mesh sieves in room-dry.Sample pretreating method is with reference to pertinent literature and is improved:
Weigh 1.00g soil samples to be placed in 10mL centrifuge tubes, add 50% magnesium nitrate-ammonia spirit (96/4, volume ratio) 4mL, vibration
5min, ultrasonic extraction 15min, centrifuge (4500rmin-1) 8min, collect supernatant.Residue extracts 2 repeatedly in aforementioned manners again
It is secondary.Merge supernatant, after HLB solid phase extraction columns (successively crossing 6mL methanol and 6mL water) extracting and enriching.Cleaned with 6mL water small
Post, 10min is dried in vacuo, then pillar is eluted with the acetic acidacetonitriles of 3mL 1%.Eluent is blown to closely under 40 DEG C of water-baths with nitrogen
It is dry, 1mL is settled to acetonitrile-water (20/80, volume ratio), solution is crossed 0.22 μm of filter membrane and is collected in sample bottle, protected at 4 DEG C
Deposit for LC-MS/MS analysis measure.
Sample determining heavy metals
Soil sample by pre-treatment, air-dry, after the levigate mesh nylon mesh of mistake 100 it is stand-by.Soil sample heavy metal (Pb, Zn, Cu, Cd)
Three steps that form (exchangeable species, reducible state, oxidable state, residual form) analysis is proposed using reference material administration of the European Community are continuous
Grading extraction method.National standard material is added during analysis and carries out quality control.Pb, Zn, Cu and Cd are used after sample treatment
Atomic absorption spectrometry.
The biological community structure of sample
Equivalent sample is respectively taken from 3 repetition soil samples of vacuum freeze drying, is mixed, then therefrom takes sample 0.1g, is used
DNA extraction kit PowerMicroorganism total DNA in DNA Isolation Kit extraction samples.Using based on
The biological community structure of Illumina HiSeq 2000 high throughput sequencing technologies analysis sample.Goal in research fragment is thin
Bacterium 16S rDNA V6 hypervariable regions, PCR amplification using primers F 985 (5 '-CNACGCGAAGAACCTTANC-3 ')/R1046 (5 '-
CGACAGCCATGCANCACCT-3 '), amplification program and conditioned reference pertinent literature.The sequence measured is by splicing and screening
Afterwards, it is that standard obtains activity classification unit (OTU) with similitude 97%, OTU passes through RDP databases (http://
Rdp.cme.msu.edu/ Classifer programs progress searching classification in), analysis microbiologic population Shannon diversity indices,
Species composition, relative abundance, contrast the biological community structure of each sample.
The high throughput fluorescence quantitative analysis of resistant gene
Equivalent sample is respectively taken from 3 repetition soil samples of vacuum freeze drying, is mixed, then therefrom weighs soil sample 0.5g, is adopted
Soil sample STb gene is extracted with Fast DNA Spin Kit for Soil kits, then carries out electrophoresis with 1% Ago-Gel
Checking.The DNA sample extracted determines concentration and corresponding purity with trace dna protein analyzer, extracts DNA sample
A260/A280Value is between 1.8~2.0.
Using the quantitative reaction platform of Smart Chip Real-time PCR Systems high throughput fluorescences.Fluorescent quantitation
Reagent is the SYBR Green I Master of Light Cycler 480.Quantifying system volume 100n L, wherein each reagent is dense eventually
Spend and be:The SYBR Green I Master Mix 1 of Light Cycler 480 ×, Nuclease-free PCR-Grade
The μ g μ L of water, BSA 1-1, DNA concentration 5ng μ L-1, 1 μm of olL of primer-1.Quantitative PCR response procedures:95 DEG C of pre-degenerations
10min;95 DEG C of denaturation 30s, 60 DEG C of annealing extension 30s, 40 circulate;Program automatic heating carries out melting curve analysis.Resistance
Gene primer has used 334 pairs of primers, according to Smart Chip Real-Time PCR System instruments with reference to pertinent literature
Setting have selected 295 antagonism gene primers and the general 16S rRNA gene primers of a pair of bacteriums.
Quantitative PCR data processing is carried out according to relevant document.According to Smart Chip Real-Time System detection
Limit and sensitivity, determine CTBe worth for 31 when detection threshold value as instrument.Each sample carries out 3 technologies and repeats to test, 3 skills
Art, which repeats all to amplify, is considered positive when coming;3 sampling repetitions at least two with a sampled point amplify, it is believed that sample
The target gene of product is effectively detected;Work as CTWhen value exceeds 31, corresponding CTValue is replaced by 31.The statistical method of relative quantification
Calculated with formula (1), (2) and (3):
ΔCT=CT(ARGs)-CT(16S) (1)
ΔΔCT=Δ CT(test)-ΔCT(control) (2)
FC=2[-(ΔΔCT)] (3)
In formula, ARGs is 295 kinds of antibiotics resistance genes to be determined, and 16S refers to the 16S rRNA bases of testing sample
Cause, CTIt is that high throughput fluorescence quantifies determined cycle threshold, Δ CTThe target gene C of certain sampleTValue and 16S rRNA gene CsT
The difference of value, Δ Δ CTRefer to the target gene Δ C of (test) sample to be measuredTIt is worth the Δ C with compareing (control) sampleTDifference
Value, FC values refer to that the target gene of (test) sample to be measured is the enrichment times for compareing (control) sample.
Data analysis
Data analysis is carried out using Excel 2010, the significance of difference of each achievement data is examined using student t.Meter
Calculate FC lower limits FC=2[-(ΔΔCT+s)], s is the parallel functional gene C of 3 samplingsTStandard variance is the same as 16S rRNA gene CsTStandard
The root of quadratic sum between variance.S=(S1 2+S2 2)1/2.In formula, s1For the parallel functional gene C of 3 samplingsTThe standard side of value
Difference, s2For the 16S rRNA gene Cs in same sampling siteTThe standard variance of value.Work as FC=2[-(ΔΔCT+s)]> 1, and student
T is examined thinks testing sample relative to reference sample significant enrichment when having conspicuousness.
Testing result
The physicochemical property of the soil of table 1
Explanation:Each data are the average value repeated three times;In same column data, same letter represents
Difference is not notable (P > 0.05), and different alphabets show significant difference (P < 0.05);Following table is same
The pH value of each treatment group soil, validity nitrogen, available phosphorus, organic carbon, NH4 +-N、NO3 -- N content is above compareing
Soil.
Antibiotic content (μ gkg in the soil of table 2-1)
Norfloxacin, Ciprofloxacin, Lomefloxacin, Enrofloxacin, tetracycline, terramycin and gold in each treatment group soil
Mycin content is below compareing soil.Compared with CS, the antibiotic concentration in AS3 is remarkably decreased (P < 0.05), have dropped
37.6%-70.2%, minimum is reached.
Each form content of beary metal (μ gg in the soil of table 3-1)
Explanation:Available state=exchangeable species+reducible state+oxidable state
Available state Pb, Zn, Cu, Cd content in each treatment group soil is less than control soil, and residual form heavy metal contains
Amount is significantly higher than control soil (P < 0.05).Under the conditions of optimal dose (the fresh Azolla imbricata/Ou Ganshu of 15kg), an available state huge sum of money
The content of category have dropped 46.8%-95.9%.
The relative abundance of resistant gene in the soil of table 4
Resistant gene recall rate in the soil of table 5
Explanation:MLSB=macrolide lipase, lincolamycin, streptavidin B resistant
Gene,
FCA=quinolone chloramphenicol resistance gene
Detect 220 kinds of ARGs in pedotheque altogether, soil bacteria show antibiotic (sulfamido, beta-lactam, FCA,
MLSB, Tetracyclines and vancomycin) resistance, the accountings of these antibiotic resistances is respectively 1.4%, 24.1%, 19.6%,
26.3%th, 19.1% and 9.5%.
9 kinds of transposase genes (tnpA-01, tnpA-02, tnpA-03, tnpA-04, tnpA- are detected in pedotheque altogether
05th, tnpA-06, tnpA-07, Tp614 and IS613).The detection of transposase gene (tnpA, IS613 and Tp614) in AS1-3
Rate is 4.1%-5.1%.Compared with AS1-3, the diversity of transposase gene have dropped respectively with relative abundance in AS4-5
66.7%-87.5% and 69.3%-89.4%, illustrate that suitable Azolla imbricata dosage can effectively control transposase gene in soil
Propagation.
Azolla imbricata phytoremediation technology is greatly reduced the relative abundance of ARGs in soil, including aac (6 ')-Ib-02,
AadE, acrA-05, vanXD, blaCTX-M-04, blaCMY2-01, blaCMY tetR-01, tetQ, tetPA, tetM-02 with
tet(34).Compared with compareing soil, bla TEM relative abundance have dropped 95.4%, 81.0% respectively in AS1, AS2 and AS3
With 99.8%.In AS3, in addition to aadA2-03, tetG-02 and mexF, other ARGs relative abundance substantially reduces.With
Control soil compares, when plant dosage increases to 10kg (AS3), erm B, erm F, ermT-01 and erm C relative abundance
Drop to 0.02%, 0.002%, 0.001% and 0.01% respectively.
When plant dosage increases to the fresh Azolla imbricatas of 15kg/bowl mandarin orange tree, soil ARGs quantity have dropped 27.1%.With compareing
Soil compares, and in addition to AS2, total ARGs of each treatment group soil relative abundance has decline, wherein AS3 total ARGs's
Relative abundance have dropped 44.5%, illustrate that suitable plant dosage can effectively suppress the relative abundance of total ARGs in soil.
Compared with compareing soil, the ermT-01 quantity in AS1-3 significantly reduces, and the ermT-01 quantity in AS4 and AS5
Slight rebound.It can be seen that suitable Azolla imbricata dosage can effectively control the ermT-01 in soil.
In treatment group soil, there is obvious Succession in biological community structure.Compared with compareing soil, everywhere
Microbial diversity in reason group soil adds, and wherein AS3 (the fresh Azolla imbricata/Ou Ganshu of 10kg) microbial diversity is most rich
Richness, and AS4-5 diversity of soil microorganism slightly falls after rise.Therefore, the Azolla imbricata plant of different amounts is more to edaphon
Sample generates different influences.
4 action principles
Contain substantial amounts of nutrient and organic matter in Azolla imbricata plant, be applied to energy improved soil structure after soil,
Improve soil physico-chemical property.Organic matter can strengthen retentivity of the heavy metal in soil surface after entering soil.With exchangeable species,
Heavy metal existing for reducible state and oxidable state has bioactivity for environment, belongs to biologically effective state;Residual form category is former
Rawore thing reference state, inanimate object validity.
The Spreading and diffusion of resistant gene includes vertical and horizontal and shifts two important channels, and vertical transfer refers to by resistance base
Host's bacterium colony succession of cause is propagated, and horizontal transfer is situated between by Mobile genetic elements (transposons, integron, plasmid etc.)
Lead and propagated between bacterium.Antibiotic and the selection pressure that heavy metal is resistant gene in environment, can co-induction resistant gene.One
Aspect, Azolla imbricata phytoremediation make antibiotic in soil be decreased obviously with available heavy metal content, meanwhile, also make in soil
The propagation of transposase gene has obtained effective suppression, so as to effectively control the propagation and diffusion of resistant gene in soil;It is another
Aspect, structure of soil microbial community and composition cause to carry ARGs there occurs obvious succession under Azolla imbricata repairing condition
Flora change, ARGs vertical transmission is have impact on, so as to have impact on ARGs distribution and return.Therefore, Azolla imbricata is planted
Thing recovery technique can effectively control the resistant gene of soil to pollute.
Described above is only the preferred embodiment of the present invention, and protection scope of the present invention is not limited merely to above-mentioned implementation
Example, all technical schemes belonged under thinking of the present invention belong to protection scope of the present invention.It should be pointed out that for the art
Those of ordinary skill for, some improvements and modifications without departing from the principles of the present invention, these improvements and modifications
It should be regarded as protection scope of the present invention.
Claims (5)
1. a kind of method of resistance gene contamination in repairing and treating soil, it is characterised in that described restorative procedure is, by
Fresh Azolla imbricata plant is filled around tree root, the amount of described Azolla imbricata plant landfill is to fill 5- around each tree wood root system
15kg Azolla imbricata plants.
2. the method for resistance gene contamination in a kind of repairing and treating soil according to claim 1, it is characterised in that described
The depth of the fresh Azolla imbricata plant of landfill be 5-10cm.
3. the method for resistance gene contamination in a kind of repairing and treating soil according to claim 1, it is characterised in that described
The mode that fresh Azolla imbricata plant is filled around tree root be:Azolla imbricata plant is uniformly placed within one week in tree root and is covered
Bury.
4. the method for resistance gene contamination in a kind of repairing and treating soil according to claim 1, it is characterised in that described
Tree root peripheral region for centered on tree area for 1.4m × 1.4m region.
5. the method for resistance gene contamination in a kind of repairing and treating soil according to claim 1, it is characterised in that described
Trees be Ou Ganshu.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201710983680.7A CN107649504B (en) | 2017-10-20 | 2017-10-20 | A kind of method of resistance gene contamination in repairing and treating soil |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201710983680.7A CN107649504B (en) | 2017-10-20 | 2017-10-20 | A kind of method of resistance gene contamination in repairing and treating soil |
Publications (2)
Publication Number | Publication Date |
---|---|
CN107649504A true CN107649504A (en) | 2018-02-02 |
CN107649504B CN107649504B (en) | 2018-08-28 |
Family
ID=61117944
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN201710983680.7A Active CN107649504B (en) | 2017-10-20 | 2017-10-20 | A kind of method of resistance gene contamination in repairing and treating soil |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN107649504B (en) |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN114433621A (en) * | 2022-01-27 | 2022-05-06 | 北京市农林科学院 | Method for reducing abundance of antibiotic resistance genes in soil by using edible fungi |
Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN101628755A (en) * | 2009-08-24 | 2010-01-20 | 南华大学 | Method for restoring uranium contaminated water body employing floating plant |
CN103387432A (en) * | 2013-07-29 | 2013-11-13 | 中国林业科学研究院亚热带林业研究所 | Method for efficiently removing antibiotics by composting bamboo carbon and pig dung |
CN205635080U (en) * | 2016-05-18 | 2016-10-12 | 温州科技职业学院 | A compound ecological bed that floats for agriculture non -point source pollution administers |
CN106311734A (en) * | 2016-08-18 | 2017-01-11 | 浙江工商大学 | Agent for soil antibiotics resistance gene contamination reduction and preparation and application of agent |
-
2017
- 2017-10-20 CN CN201710983680.7A patent/CN107649504B/en active Active
Patent Citations (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN101628755A (en) * | 2009-08-24 | 2010-01-20 | 南华大学 | Method for restoring uranium contaminated water body employing floating plant |
CN103387432A (en) * | 2013-07-29 | 2013-11-13 | 中国林业科学研究院亚热带林业研究所 | Method for efficiently removing antibiotics by composting bamboo carbon and pig dung |
CN205635080U (en) * | 2016-05-18 | 2016-10-12 | 温州科技职业学院 | A compound ecological bed that floats for agriculture non -point source pollution administers |
CN106311734A (en) * | 2016-08-18 | 2017-01-11 | 浙江工商大学 | Agent for soil antibiotics resistance gene contamination reduction and preparation and application of agent |
Non-Patent Citations (6)
Title |
---|
C. FORNI等: ""Drugs uptake and degradation by aquatic plants as a bioremediation technique"", 《MINERVA BIOTEC》 * |
万合锋等: "满江红资源化利用及对环境修复作用的研究进展", 《福建农业学报》 * |
廖德平: "绿肥在林果园土壤培肥中的作用及施用方法", 《四川农业科技》 * |
秦丽婷等: "环境中磺胺类抗生素的生物降解及其抗性基因污染现状", 《环境化学》 * |
蔡道基等: "稻田绿肥——红萍(满江红)的养殖和利用的研究", 《土壤通报》 * |
陈小洁等: "两种水生植物对抗生素污染水体的修复作用", 《亚热带植物科学》 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN114433621A (en) * | 2022-01-27 | 2022-05-06 | 北京市农林科学院 | Method for reducing abundance of antibiotic resistance genes in soil by using edible fungi |
Also Published As
Publication number | Publication date |
---|---|
CN107649504B (en) | 2018-08-28 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
Li et al. | Straw alters the soil organic carbon composition and microbial community under different tillage practices in a meadow soil in Northeast China | |
Tan et al. | Soil potentials to resist continuous cropping obstacle: Three field cases | |
Yang et al. | Application of biosolids drives the diversity of antibiotic resistance genes in soil and lettuce at harvest | |
Cherif et al. | Effects of municipal solid waste compost, farmyard manure and chemical fertilizers on wheat growth, soil composition and soil bacterial characteristics under Tunisian arid climate | |
Luo et al. | Grass and maize vegetation systems restore saline‐sodic soils in the Songnen Plain of northeast China | |
Lee et al. | Bacterial populations assimilating carbon from 13C-labeled plant residue in soil: analysis by a DNA-SIP approach | |
Chen et al. | Phytoremediation of cadmium-contaminated soil by Sorghum bicolor and the variation of microbial community | |
Hu et al. | Nitrogen fixation and crop productivity enhancements co‐driven by intercrop root exudates and key rhizosphere bacteria | |
Kalkhajeh et al. | Co-application of nitrogen and straw-decomposing microbial inoculant enhanced wheat straw decomposition and rice yield in a paddy soil | |
Watanabe et al. | Vertical changes in bacterial and archaeal communities with soil depth in Japanese paddy fields | |
Bagwell et al. | Persistence of selected Spartina alterniflora rhizoplane diazotrophs exposed to natural and manipulated environmental variability | |
de Sosa et al. | Spatial zoning of microbial functions and plant-soil nitrogen dynamics across a riparian area in an extensively grazed livestock system | |
Schmidt et al. | Spatio-temporal variability of microbial abundance and community structure in the puddled layer of a paddy soil cultivated with wetland rice (Oryza sativa L.) | |
Lu et al. | Distribution of antibiotic resistance genes in soil amended using Azolla imbricata and its driving mechanisms | |
Stock et al. | Field-deployed extruded seed pellets show promise for perennial grass establishment in arid zone mine rehabilitation | |
Zhang et al. | Identification of fungal populations assimilating rice root residue-derived carbon by DNA stable-isotope probing | |
Yi et al. | Microplastics have rice cultivar-dependent impacts on grain yield and quality, and nitrogenous gas losses from paddy, but not on soil properties | |
Qiu et al. | Effects of biochar on bacterial genetic diversity in soil contaminated with cadmium | |
CN107649504B (en) | A kind of method of resistance gene contamination in repairing and treating soil | |
Zhou et al. | Effect of grazing intensities on the activity and community structure of methane-oxidizing bacteria of grassland soil in Inner Mongolia | |
CN108372194B (en) | Method for repairing polychlorinated biphenyl polluted soil by using arbuscular mycorrhizal fungi and pig charcoal in combined manner | |
CN113426828B (en) | Method for restoring strontium-polluted soil | |
CN106587557A (en) | Sludge treatment method using pennisetum hybrid | |
Chen et al. | Phytoremediation with application of anaerobic fermentation residues regulate the assembly of ecological clusters within co-occurrence network in ionic rare earth tailings soil: A pot experiment | |
Knoblauch et al. | Change of ergosterol content after inorganic N fertilizer application does not affect short-term C and N mineralization patterns in a grassland soil |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination | ||
GR01 | Patent grant | ||
GR01 | Patent grant |