CN107419007A - Method based on nucleic acid chromatography biosensor technique detection staphylococcus aureus - Google Patents

Method based on nucleic acid chromatography biosensor technique detection staphylococcus aureus Download PDF

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CN107419007A
CN107419007A CN201710482408.0A CN201710482408A CN107419007A CN 107419007 A CN107419007 A CN 107419007A CN 201710482408 A CN201710482408 A CN 201710482408A CN 107419007 A CN107419007 A CN 107419007A
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staphylococcus aureus
nature controlling
lamp
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罗云波
许文涛
徐瑗聪
张莉
黄昆仑
程楠
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China Agricultural University
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China Agricultural University
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
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    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/689Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for bacteria

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Abstract

The present invention relates to a kind of method based on nucleic acid chromatography biosensor technique detection staphylococcus aureus, according to the virulence gene nuc of staphylococcus aureus, design loop-mediated isothermal amplification (LAMP) primer (SEQ ID NO:1 4), with reference to nano enzyme nucleic acid test strip, establish a kind of detection methods of staphylococcus aureus based on LAMP nanometer enzyme sensors.This method can be successfully used to distinguish living bacterial cells and dead bacterium cell, to the Monitoring lower-cut of staphylococcus aureus up to 10CFU/mL.

Description

Method based on nucleic acid chromatography biosensor technique detection staphylococcus aureus
Technical field
The present invention relates to bio-sensing detection technique field, specifically, is related to a kind of based on nucleic acid chromatography bio-sensing The method of technology for detection staphylococcus aureus.
Background technology
Staphylococcus aureus (Staphylococcus aureus) is a kind of important pathogen of the mankind, is under the jurisdiction of Portugal Grape Coccus (Staphylococcus), there is the nickname of " thermophilic meat bacterium ", be the representative of gram-positive bacteria, can cause many serious Infection.Typical staphylococcus aureus is ball-type, 0.8 μm or so of diameter, is arranged in thyrsiform under microscope, no brood cell, Flagellum, most of no pod membranes, Gram-positive.Staphylococcus aureus is ubiquitous in nature, empty gas and water, ash It can all be found in the excreta of dirt and humans and animals.The Center for Disease Control is reported, is felt as caused by staphylococcus aureus Dye accounts for second, is only second to Escherichia coli.Staphylococcus aureus enterotoxin turns into worldwide health problem, in the U.S., by Poison by food caused by Staphylococcus aureus enterotoxin, account for the 33% of whole food posioning, it is Canadian then more, account for To 45%, food poisoning caused by Chinese staphylococcus aureus also happens occasionally.
Traditional method of detecting bacterium is mainly according to physiological and biochemical property, but traditional detection method needs to increase before passing through The steps such as bacterium, the separation of selective flat board, Biochemical Identification, determine that result needs 5-7 days from being sampled to, detection cycle length, behaviour Make cumbersome, workload is big;Using the specificity of antigen-antibody reaction, bacterium is differentiated, the history of existing over half a century, But the screening of microbial antibodies is very cumbersome, and final detection specificity is not high;Molecular Biological Detection technology is not It is disconnected to improve and develop, the problems such as traditional detection method experimental implementation is cumbersome, time-consuming is overcome, also to carry out for microorganism Quick determination method developed rapidly, but be to be not easy analysis result the shortcomings that molecular biology method.With existing For the development of biotechnology, more faster than conventional method, more sensitive biology sensor new technology is in field of detection of food safety Show up prominently.Biology sensor possesses the advantages that high specificity, high sensitivity, can shorten analysis with Simplified analysis detecting step Time, it is often more important that make it possible on-line real-time measuremen, be easy to carry and field work, obtained in field of food safety Faster development.In recent years, the development and application of numerous new materials, new technology is just turning into the focus of research, is biology sensor Development be filled with new vitality, huge application potential is shown in microorganism detection field.Therefore golden yellow grape is established Coccus is reliable, quick sensor detecting method, the method that can particularly identify life or death bacterium, is sieved in daily monitoring, market Look into etc. is significant.
The content of the invention
It is an object of the invention to provide a kind of side based on nucleic acid chromatography biosensor technique detection staphylococcus aureus Method.
Present inventive concept is as follows:Develop quick and the super sensitivity detection method, particularly energy of a kind of staphylococcus aureus The method of enough identification life or death bacterium, foundation are based on nitrine propidium iodide (PMA), loop-mediated isothermal amplification (LAMP) and nano enzyme The continuous cascade nanometer enzyme biologic sensor of the living stems of test paper.In LAMP reactions, modified using fluorescein (FITC) With the nuc genes of the primer measure staphylococcus aureus of biotin (BIO) modification.PMA is combined with LAMP, applied to anyway The separation of staphylococcus aureus.Then, the immunochromatography bar (nano enzyme based on magnetic-particle is prepared using nanometer enzyme probe Bar) it is used to detect amplified signal, detect by visual observation or carry out result interpretation or quantitative using bar graph-type readout, be Site Detection Staphylococcus aureus viable bacteria provides quick, hypersensitive and easily instrument.
In order to realize the object of the invention, present invention firstly provides for detecting staphylococcus aureus The LAMP primer group of (Staphylococcus aureus), including (SEQ ID NO:1-4):
Outside forward primer F3:5’-GTCAAAGAACTGATAAATATGGAC-3’;
Outside reverse primer B3:5’-TTACAATGAGCATTATTGACCT-3’;
Inner side forward primer FIP:5’-GCCTTGACGAACTAAAGCTTCGGTGGCTTAGCGTATATTTATGC-3’;
Inner side reverse primer BIP:5’-TTAAGAAAAAGTGAAGCACAAGC-GAATCAGCGTTGTCTTCG-3’.
Wherein, primers F IP 5 ' end mark biotins, primer BIP 5 ' end mark fluorescent element FITC.
The present invention also provides a kind of nanometer enzymatic nucleic acid chromatograph test strip, and the preparation method of the test strips includes following step Suddenly:
1)Fe3O4The preparation of magnetic particle;
2) preparation of nanometer enzyme probe (MNP):By Fe3O4Magnetic particle is incubated with biotin secondary antibody, obtains biotin two Anti- nanometer enzyme probe;
3) assembling of nanometer enzymatic nucleic acid chromatograph test strip:The test strips include sample pad, pad, nitrocellulose filter And absorption pad, wherein, the nitrocellulose filter is provided with least 1 detection line and 1 nature controlling line;It is fixed on the pad There is biotin secondary antibody nanometer enzyme probe;
1. marking detection line and nature controlling line on nitrocellulose filter with FITC antibody and biotin antibody respectively, dry;
2. by above-mentioned sample pad, pad, the nitrocellulose filter with detection line and nature controlling line and absorption pad successively It is pasted onto on bottom plate (plastics lining board), completes the assembling of test strips.The structural representation of the test strips assembled is shown in Fig. 5.
Hydro-thermal method synthesis Fe is utilized in step 1)3O4Magnetic particle, it is specially:By 0.6-0.8g FeCl3·6H2O is dissolved in In 20mL ethylene glycol, 1.5-2.0g sodium acetates are then added, 30-40min is stirred vigorously, is then sealed in autoclave, 200 DEG C Heat 16-18h;Magnetic granular product is washed several times with ethanol, and is dried at 60 DEG C;Dichloroethanes and N- hydroxysuccinimidyls acyl is sub- Each 5-8mg of amine is dissolved in 1mL deionized waters by being vortexed, and mixed liquor is made, and 5-8mg magnetic particle then is added into mixed liquor In, 30-40min is incubated at room temperature, is then collected magnetic particle with magnet, is produced Fe with milli-Q water twice3O4Magnetic particle.
Step 2) is specially:The μ g/mL of concentration 100 biological antibody is added in 50mM pH 6.0 sodium-acetate buffer, Then with 5-8mg Fe3O4Magnetic particle mixes, by mixture vortex mixed, 4 DEG C of overnight incubations;Two are washed with pH7.0 PBS liquid Secondary mixture, then it is incubated at room temperature 30min in 50mM pH7.2 Tris buffer solutions;Washed again with pH7.0 PBS liquid, i.e., Obtain biotin secondary antibody nanometer enzyme probe.
Detection line is located on the position away from nitrocellulose filter lower edge 1.1cm in step 3), and nature controlling line is located at away from nitric acid On cellulose membrane lower edge 1.6cm position.The distance between detection line and nature controlling line are 4.5mm.By 1.0 μ L/cm by FITC Antibody and biotin antibody are sprayed in the detection line and nature controlling line of nitrocellulose filter respectively.Wherein in detection line and nature controlling line The concentration of coated antibody is 0.5-2mg/mL.The optium concentration of antibody is 1mg/mL.
The biotin antibody used in the present invention is purchased from Sigma companies, and goods number B7653, FITC antibody are purchased from Sigma Company, goods number F5636.Biotin secondary antibody is sheep anti-mouse igg.Nitrocellulose filter used is Millipore135S.
In a preferred embodiment of the present invention, the nanometer enzymatic nucleic acid chromatograph test strip prepare it is as follows:
Hydro-thermal method synthesis Fe is utilized in step 1)3O4Magnetic particle, it is specially:By 0.6g FeCl3·6H2O is dissolved in 20mL In ethylene glycol, 1.5g sodium acetates are then added, 30min is stirred vigorously, is then sealed in autoclave, 200 DEG C of heating 16h;Magnetic Granular product is washed several times with ethanol, and is dried at 60 DEG C;Dichloroethanes and each 5mg of n-hydroxysuccinimide are passed through into whirlpool Rotation is dissolved in 1mL deionized waters, and mixed liquor is made, and is then added in mixed liquor 5mg magnetic particle, is incubated 30min at room temperature, Then magnetic particle is collected with magnet, produces Fe with milli-Q water twice3O4Magnetic particle.
Step 2) is specially:The μ g/mL of concentration 100 biotin secondary antibody is added to 50mM pH 6.0 sodium-acetate buffer In, then with 5mg Fe3O4Magnetic particle mixes, by mixture vortex mixed, 4 DEG C of overnight incubations;Washed with pH7.0 PBS liquid Mixture twice, then it is incubated at room temperature 30min in 50mM pH7.2 Tris buffer solutions;Washed again with pH7.0 PBS liquid, Obtain biotin secondary antibody nanometer enzyme probe.Finally nanometer enzyme probe is distributed in 1mL 5%BSA-PBS solution.Use JEOL 2000FX 200kV transmission electron microscopes (TEM) observe the particle diameter of nanometer enzyme probe, and MNP Size Distribution, which is shown, puts down A diameter of 200nm, the structure available for nanometer enzyme sensor.
By sample pad, the pad for being fixed with biotin secondary antibody nanometer enzyme probe, the nitric acid with detection line and nature controlling line Cellulose membrane and absorption pad are pasted onto on bottom plate successively, that is, complete the assembling of test strips.
The present invention also provides the method based on nucleic acid chromatography biosensor technique detection staphylococcus aureus, including following Step:
S1, extraction testing sample DNA, using DNA as template, it is anti-to carry out LAMP-PCR amplifications using above-mentioned LAMP primer group Should;
S2, the LAMP-PCR amplified productions for taking 10 μ L steps S1, above-mentioned receive is added drop-wise to after being mixed with 50 μ L reaction buffers In the sample pad of rice enzymatic nucleic acid chromatograph test strip, after 5-20min (preferred reaction time is not less than 15min), in p-wire and matter Control and 2 drop substrate buffer solutions are added dropwise on line, then colour developing situation, sentence read result are observed by the naked eye after reacting 5min:Negative reaction: Nature controlling line develops the color, and detection line does not develop the color;Positive reaction:Nature controlling line, detection line develop the color;Failure reaction:If nature controlling line does not develop the color, Then detection failure or test strips failure.
For quantitative measurment, using the optics of the portable strip reader record strip band combined with band reader software Intensity, the content of staphylococcus aureus in testing sample is calculated according to optical strength.
Wherein, reaction buffer is described in step S2:4 × SSC, 0.2m/m% Tween-20.
The substrate buffer solution used in the present invention is that commercial reagents (are purchased from the limited public affairs of Beijing Zhong Shan Golden Bridge biotechnology Department), contain 20 × DAB and 20 × H2O2
In the present invention, the system of LAMP-PCR amplified reactions is:1 × Bst Thermal Buffer, 0.6M Betaine, 0.5mM dNTPs solution, 1.6 μM of FIP, 1.6 μM of BIP, 0.2 μM of F3,0.2 μM of B3,3.6mM MgSO4, 8U Bst DNA Polymerase Large fragment, 2 μ L templates, ddH2O complements to 25 μ L.
LAMP-PCR response procedures are:65 DEG C of 30min, then 85 DEG C of 3min.
The step of nitrine propidium iodide is handled is carried out before step S1, in addition to testing sample, is specially:To 1 μ L Final concentration of 10 μ g/mL nitrine propidium iodide is added in testing sample containing viable bacteria or hot inactivation of bacterial, lucifuge is incubated 5min, then sample cell is remotely from light source 20cm and level is put by sample exposure 5min using 500W halogen light sources Put on ice, shake sample cell every 30s to keep the uniform exposure to light source;Then DNA extractions are carried out.
The present invention further provides be used to detect the LAMP primer group of staphylococcus aureus and/or described receive containing described The kit of rice enzymatic nucleic acid chromatograph test strip.
The present invention has advantages below:
(1) present invention develops the nanometer enzyme biologic sensor that PMA, LAMP are combined with nanometer enzyme test peper first.
(2) nanometer enzyme test peper is successfully used to distinguish living bacterial cells and dead bacterium cell first.
(3) nanometer enzyme biologic sensor of the invention can be used for the field diagnostic test of staphylococcus aureus viable bacteria.
(4) one group of new LAMP primer is provided, the nuc genes available for detection staphylococcus aureus.
(5) nanometer enzyme sensor to the Monitoring lower-cut of staphylococcus aureus up to 10CFU/mL.
Brief description of the drawings
Fig. 1 is staphylococcus aureus LAMP amplifications in the embodiment of the present invention 1;Wherein, M is DNA Marker, swimming Road 1-3 expands for S. aureus-positive, and swimming lane 4 expands to be negative.
Fig. 2 is the optimization to biology sensor in the embodiment of the present invention 2;Wherein, (A) membrane material is to biology sensor peak face Long-pending influence;(B) influence of the FITC antibody concentrations to biology sensor peak area in detection line;(C) dosage of nanometer enzyme probe Influence of the volume to the peak area of biology sensor;(D) influence of the reaction time to the peak area of biology sensor.
Fig. 3 is performance of biosensor analysis result figure in the embodiment of the present invention 3;Wherein, (A) sensor reappearance is analyzed Result figure.(B) sensor specificity analysis result figure.Sample is respectively from left to right:Distilled water, other enterobacteria DNA cloning Product, other non-staphylococcus aureus strains DNA cloning products, dead staphylococcus aureus strains DNA cloning product, gold living Staphylococcus aureus bacterial strain DNA cloning product;(C) sensor stability analysis result figure.It is with a collection of sensor from left to right Test result week about.
Fig. 4 is the linearity curve that staphylococcus aureus detects in the embodiment of the present invention 4:Peak area is with lg (golden yellow Portugals Grape coccus concentration) change.
Fig. 5 is the structural representation of nanometer enzymatic nucleic acid chromatograph test strip of the present invention.Wherein, 1- sample pads, 2- cellulose nitrates Plain film, 3- pads, 4- absorption pads, 5- p-wires, 6- nature controlling lines, 7- bottom plates.
Embodiment
Following examples are used to illustrate the present invention, but are not limited to the scope of the present invention.Unless otherwise specified, embodiment According to conventional laboratory conditions, as Sambrook equimoleculars Cloning: A Laboratory Manual (Sambrook J&Russell DW, Molecular Cloning:A Laboratory Manual, 2001), or the condition according to manufacturer's specification suggestion.
Method of the embodiment 1 based on nucleic acid chromatography biosensor technique detection staphylococcus aureus
1st, experiment material
Staphylococcus aureus used is shown in Table 1 with non-staphylococcus aureus strains information in the present embodiment.
The information of staphylococcus aureus and non-staphylococcus aureus used in table 1
The specificity of nanometer enzyme sensor is determined using staphylococcus aureus and other bacterium bacterial strains.Will before use All bacterial strains are stored in -80 DEG C 20% (v/v) glycerite.It is then incubated overnight activation in LB culture mediums.It is logical Cross light splitting spectrophotometric determination of gold staphylococcus aureus concentration.
2nd, staphylococcus aureus gene group is extracted
Using the bacterial genomes DNA extraction kit of New Industry companies, comprise the following steps that:
(1) inoculum 1.5mL, 12000g centrifugation 1min is taken, exhausts supernatant as far as possible.
(2) 200 μ L solution As are added into bacterial precipitation, vibrates to thalline and fully suspends.
(3) 20 μ L10mg/mL Proteinase K is added into pipe, is fully mixed, centrifuge tube during which can be overturned and mix number, Untill treatments of the sample is complete.It is that liquid is limpid and sticky to digest complete mark.
(4) 2000 μ L solution Bs are added into pipe, are fully mixed.Such as there is white precipitate, 75 DEG C of 15-30min can be placed in, Precipitation can disappear, and not influence subsequent experimental.
(5) 220 μ L absolute ethyl alcohols are added into pipe, are fully mixed, now it is possible that flocculent deposit, does not influence DNA Extraction, solution and flocculent deposit can be all added in adsorption column, stand 2min.
(6) 12000g centrifuges 1min, waste liquid, adsorption column is put into collecting pipe.
(7) 700 μ L rinsing liquids are added into adsorption column, 12000g centrifugation 1min, waste liquid, adsorption column are put into collecting pipe In.
(8) 500 μ L rinsing liquids are added into adsorption column, 12000g centrifugation 1min, waste liquid, adsorption column are put into collecting pipe In.
(9) 12000g centrifuges 2min, and adsorption column is placed in into room temperature or 50 DEG C of incubators are placed several minutes, is removed residual in adsorption column The rinsing liquid stayed.
(10) adsorption column is put into a clean centrifuge tube, to the hanging 500-200 μ L that are added dropwise in adsorbed film center through 75 The eluent of DEG C water-bath preheating, room temperature place 2min, 12000g centrifugations 2min.
(11) centrifugation gained eluent is added in adsorption column, and room temperature places 2min, 12000g centrifugations 2min, you can obtain The bacterial genomes DNA of high quality.
3rd, nitrine propidium iodide is handled
By 1 μ L viable bacterias or hot inactivation of bacterial, the final concentration of 10 μ g/mL of addition PMA.Sample lucifuge is incubated 5min, and Mixing makes PMA penetrate into dead cell.Then 500W halogen light sources are used by sample exposure 5min.Sample cell is remotely from At light source 20cm and lie in a horizontal plane on ice to avoid superheated.Sample cell is shaken per 30s to keep to the uniform sudden and violent of light source Dew.The genome of staphylococcus aureus is separated using the bacterial genomes DNA extraction kit of New Ind μ stry companies DNA, the genomic DNA of extraction carry out LAMP reactions immediately after preparation.In the heat inactivation staphylococcus aureus sample of PMA processing In product, genomic DNA is not extracted, and sample can not be expanded using LAMP.And not using the life or death bacterium of PMA processing Genomic DNA can be carried out expanding.It can be seen that eliminating the amplified band of dead bacterium by PMA processing, the amplification of viable bacteria is only left Band.Thus prove that PMA processing can effectively eliminate the DNA signals of dead bacterium.
4th, design of primers
The staphylococcus aureus gene nuc announced according to document conserved region, it is situated between by Japanese Rong Yan Co., Ltd. ring Guide thing Photographing On-line software LAMP primer designing software primerexplorer V 4.0 (https://primerexplorer.jp/lamp4.0.0/index.html) for gene design primer, including draw outside 2 Thing F3, B3 and 2 inner primer FIP, BIP (table 2).In FIP 5 ' end mark biotins, BIP 5 ' end mark fluorescent elements (FITC).Primer is synthesized by Shanghai Ying Weijieji biologies Co., Ltd, for follow-up screening and optimizing.
Primer sequence used in the LAMP of table 2
5th, the amplification of staphylococcus aureus gene group
Staphylococcus aureus gene group is expanded (table 3) using ring mediated isothermal amplification method.
The LAMP reaction systems of table 3
LAMP response procedures are:30min is reacted at 65 DEG C, reacting 3min at 85 DEG C inactivates enzyme.This experiment is used and often managed 25 μ L system, wherein being not added with staphylococcus aureus gene group as negative control group.The μ L of amplified production 5 are taken, with 1 μ L loadings Buffer solution is well mixed, and carries out electrophoresis with 2% Ago-Gel, typical DNA cloning band (figure occurs in staphylococcus aureus 1), non-staphylococcus aureus strains do not produce any band, thus prove the primer pair staphylococcus aureus of design and have 100% specificity.
6th, the preparation of magnetic particle and nanometer enzyme probe
Magnetic particle is synthesized according to hydro-thermal method.Specifically, by 0.6g FeCl3·6H2O is dissolved in 20mL ethylene glycol, then 1.5g sodium acetates are added, 30min is stirred vigorously, is then sealed in autoclave, 200 DEG C of heating 16h;Magnetic granular product ethanol Washing several times, and is dried at 60 DEG C;Dichloroethanes and each 5mg of n-hydroxysuccinimide are dissolved in 1mL by being vortexed In ionized water, mixed liquor is made, then 5mg magnetic particle is added in mixed liquor, 30min is incubated at room temperature, is then received with magnet Collect magnetic particle, produce Fe with milli-Q water twice3O4Magnetic particle.
The μ g/mL of concentration 100 biotin secondary antibody (sheep anti-mouse igg) is added in 50mM pH 6.0 sodium-acetate buffer, Then with 5mg Fe3O4Magnetic particle mixes, by mixture vortex mixed, 4 DEG C of overnight incubations;Washed twice with pH7.0 PBS liquid Mixture, then it is incubated at room temperature 30min in 50mM pH7.2 Tris buffer solutions;Washed, obtained with pH7.0 PBS liquid again Biotin secondary antibody nanometer enzyme probe.Finally nanometer enzyme probe is distributed in 1mL 5%BSA-PBS solution.Use JEOL 2000FX 200kV transmission electron microscopes (TEM) observe the particle diameter of nanometer enzyme probe, and MNP Size Distribution shows average diameter For 200nm, the structure available for nanometer enzyme sensor.
7th, the preparation of nanometer enzyme sensor
The assembling of nanometer enzymatic nucleic acid chromatograph test strip (nanometer enzyme test peper):The test strips include sample pad, pad, nitre Acid cellulose film and absorption pad, wherein, the nitrocellulose filter is provided with least 1 detection line and 1 nature controlling line.
1. the preparation of sample pad and pad:The first sticking two-faced adhesive tape on bottom plate, then pastes pad, is then combining Sample pad, sample pad 2-4mm overlapping with pad are pasted on pad.The spy of biotin secondary antibody nano enzyme is wherein fixed with pad Pin.
2. FITC antibody and biotin antibody are diluted to optium concentration 1mg/mL with optimized buffer liquid respectively.It will dilute FITC antibody-solutions load BIODOT Film-cutting machines shower nozzle 2, be fixed on the position away from NC film lower edges 1.1cm, diluted Biotin two corresponding anti-solution loads BIODOT Film-cutting machines shower nozzle 1, is fixed on the position away from NC film lower edges 1.6cm.Detection line (T Line) with the distance between nature controlling line (C lines) it is 4.5mm, it is sprayed on respectively on the T lines and C lines of NC films by 1.0 μ L/cm.It will spray It is standby after good 37 DEG C of drying overnight of NC films.The wide test paper of 3.8mm is cut into cutting machine, the test paper cut is put into equipped with drying In the packaging bag of agent.
3. above-mentioned sample pad, pad, NC films and absorption pad with T lines and C lines are pasted onto on bottom plate successively, it is complete Into the assembling of test strips.
8th, the detection of staphylococcus aureus
After PMA and LAMP operating procedures are completed, detected with nanometer enzyme test peper.Detection walks comprising two reactions Suddenly:(1) hybridization reaction;(2) signal enhancing.
10 μ L LAMP-PCR amplified productions are taken, are mixed with 50 μ L reaction buffers (4 × SSC, 0.2m/m% Tween-20) It is added drop-wise in the sample pad of above-mentioned nanometer enzymatic nucleic acid chromatograph test strip, after reacting 15min, is added dropwise on p-wire and nature controlling line afterwards 2 drop substrate buffer solutions (contain 20 × DAB and 20 × H2O2Commercial reagents), reaction and then observes by the naked eye colour developing at 5min Situation, sentence read result:Negative reaction:Nature controlling line develops the color, and detection line does not develop the color;Positive reaction:Nature controlling line, detection line develop the color; Failure reaction:If nature controlling line does not develop the color, detection failure or test strips failure.
For quantitative measurment, the optics of the portable strip reader record strip band combined with band reader software is used Intensity, the content of staphylococcus aureus in testing sample is calculated according to optical strength.
It is of the invention right in order to verify accuracy of the biology sensor of the invention established in actual sample detection process Certain density staphylococcus aureus carries out mark-on reclaims checking.From local supermarket, purchase baby milk powder passes through standard culture It is negative with colony counting method detection staphylococcus aureus.Then by staphylococcus aureus with 10,103With 105CFU/mL's is dense Mixed in degree incorporation milk powder.PMA processing, genome extraction, LAMP amplifications, nucleic acid test strip colour developing are carried out successively, and peak area is read Take, quantitative analysis, as a result show scope of the rate of recovery of staphylococcus aureus 96.1 ± 6.4% to 106.7 ± 2.8% It is interior, show that the sensor detecting method of the invention established can be used for the detection (table 4) of actual sample.
4 nanometers of enzyme sensor detection milk powder staphylococcus aureus contents of table
The optimization of the nano enzyme nucleic acid test strip of embodiment 2
Fe is synthesized according to hydro-thermal method3O4Magnetic particle, then magnetic particle and biotin secondary antibody (sheep anti-mouse igg) are incubated, Prepare nanometer enzyme probe.The T lines and the line of C line positions of FITC antibody and biotin antibody on NC films are utilized respectively, after drying It is assembled into nano enzyme nucleic acid test strip.In order to improve the sensitivity of nanometer enzyme sensor, by comparing the performance including membrane material, The concentration of detection zone FITC antibody, the amount of nanometer enzyme probe, reaction time are systematically analyzed.As a result prove to use The performance of the nanometer enzyme sensor of Millipore135S nitrocellulose filters is more preferable (Fig. 2A).Using 1mg/mL FITC antibody and 1mg/mL sheep anti-mouse iggs, the signal peak area highest (Fig. 2 B) of acquisition.In addition, the amount of nanometer enzyme probe influences nanometer enzyme probe Hybridization efficiency between sample, and the use of 10 μ L nanometer enzyme probe is optimal volume (Fig. 2 C).Test strips chromogenic reaction Time is not less than 15min (Fig. 2 D).
The performance detection of 3 nanometers of enzyme sensors of embodiment
The principle of this nanometer of enzyme sensor is as follows:First, sample (step 1) is handled with PMA.PMA can optionally be worn The cell membrane of saturating dead cell damage, is combined with intracellular DNA, and it is cannot be used for subsequent LAMP and expanded, but if When being the complete cell membrane of living cells, PMA cannot enter cell.Then, many BIO- are produced in a short time using LAMP Duplex DNA (the steps 2) connected with FITC-.In the presence of target substance nuc specific sequences, identified and expanded by four kinds of primers Increase.3rd is the visualization interpretation (step 3) of nanometer enzymatic nucleic acid test paper.By physical absorption by FITC antibody and sheep anti-mouse igg It is fixed on nitrocellulose filter, to form detection zone (TL) and quality control region (CL) respectively.If sample is positive, pass through LAMP expand, 5 ' end biotin labelings of target substance, 3 ' end marked with FITC, sample solution again with nanometer enzyme probe knot Close.Then, the FITC antibody hybridizations of conjugate and detection zone.The conjugate formed continues along band migration and passes through nano enzyme Probe and sheep anti-mouse igg reaction, develop the color in quality control region.By DAB/H2O2When zymolyte is applied to detection zone and quality control region, nanometer Enzyme and DAB/H2O2Enzymatic reaction between zymolyte is by color reaction is produced to strengthen visual effect.In the absence of living golden yellow In the case of staphylococcus, only quality control region develops the color.
The performance of nanometer enzyme sensor is assessed by the following aspects.First, reappearance is in biology sensor is evaluated Have great importance.By using the reproduction of 100CFU/mL work staphylococcus aureus (Fig. 3 A) test biology sensor Property, test five times altogether.The corresponding RSD values of optic response are 1.5%, show that this nanometer of enzyme sensor has excellent repeatability. Due to the sample always mixture of different bacterium species in practice, it is intended to make detection method that there is higher specificity. In order to evaluate the specificity of nanometer enzyme sensor, using distilled water, the DNA of the dead bacterium of staphylococcus aureus, Staphylococcus aureus The DNA of bacterium viable bacteria and other Enterobacter bacteria bacterial strain DNA and other non-Enterobacter bacteria bacterial strain DNA.As a result such as Fig. 3 B institutes Show, do not observe false positive.The response holding of the non-dead bacterium of staphylococcus aureus and staphylococcus aureus and background signal one Sample is low, shows that non-specific adsorption has no significant effect the inspection of staphylococcus aureus viable bacteria under the experiment condition to reaction system Survey.Early stage also further improves the high specific of nanometer enzyme sensor by using LAMP amplifications.For stability (life-span) Research, it is the performance that nanometer enzyme sensor is tested after storing 1-5 weeks at room temperature.As a result as shown in Figure 3 C, nanometer enzyme sensor Reaction to 100CFU/mL staphylococcus aureuses keeps almost identical, shows that the nano enzyme sensor stability is good.
The nano enzyme transducer sensitivity of embodiment 4 is verified
In order to evaluate the sensitivity of nanometer enzyme sensor, the golden yellow containing various concentrations is measured under optimum experimental condition (scope is from 0 to 10 for staphylococcus viable bacteria5CFU/mL sample solution), the absorption peak area of TL lines is then measured, three parallel Experiment.It is being minimal in maximum magnitude, the gained figure of the response to staphylococcus aureus concentration is linear, and related side Journey is peak area=21384lg staphylococcus aureuses concentration+3485.1, coefficient R2For 0.9948, it is adapted to quantitative detection. Wherein, staphylococcus aureus concentration unit is CFU/mL.
Although above the present invention is described in detail with a general description of the specific embodiments, On the basis of the present invention, it can be modified or improved, this will be apparent to those skilled in the art.Cause This, these modifications or improvements, belong to the scope of protection of present invention without departing from theon the basis of the spirit of the present invention.
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Claims (10)

1. the LAMP primer group for detecting staphylococcus aureus (Staphylococcus aureus), it is characterised in that bag Include:
Outside forward primer F3:5’-GTCAAAGAACTGATAAATATGGAC-3’;
Outside reverse primer B3:5’-TTACAATGAGCATTATTGACCT-3’;
Inner side forward primer FIP:5’-GCCTTGACGAACTAAAGCTTCGGTGGCTTAGCGTATATTTATGC-3’;
Inner side reverse primer BIP:5’-TTAAGAAAAAGTGAAGCACAAGC-GAATCAGCGTTGTCTTCG-3’;
Wherein, primers F IP 5 ' end mark biotins, primer BIP 5 ' end mark fluorescent element FITC.
2. a kind of nanometer enzymatic nucleic acid chromatograph test strip, it is characterised in that the preparation method of the test strips comprises the following steps:
1)Fe3O4The preparation of magnetic particle;
2) preparation of nanometer enzyme probe:By Fe3O4Magnetic particle is incubated with biotin secondary antibody, obtains biotin secondary antibody nano enzyme Probe;
3) assembling of nanometer enzymatic nucleic acid chromatograph test strip:The test strips include sample pad, pad, nitrocellulose filter and suction Pad is received, wherein, the nitrocellulose filter is provided with least 1 detection line and 1 nature controlling line;Life is fixed with the pad Thing element secondary antibody nanometer enzyme probe;
1. marking detection line and nature controlling line on nitrocellulose filter with FITC antibody and biotin antibody respectively, dry;
2. above-mentioned sample pad, pad, the nitrocellulose filter with detection line and nature controlling line and absorption pad are pasted successively On bottom plate, the assembling of test strips is completed.
3. test strips according to claim 2, it is characterised in that hydro-thermal method synthesis Fe is utilized in step 1)3O4Magnetic particle, Specially:By 0.6-0.8g FeCl3·6H2O is dissolved in 20mL ethylene glycol, then adds 1.5-2.0g sodium acetates, stirs 30- 40min, then it is sealed in autoclave, 200 DEG C of heating 16-18h;Magnetic granular product is washed with ethanol, and is dried at 60 DEG C; Dichloroethanes and each 5-8mg of n-hydroxysuccinimide are dissolved in 1mL deionized waters by being vortexed, mixed liquor is made, so 5-8mg magnetic particle is added in mixed liquor afterwards, is incubated 30-40min at room temperature, then magnetic particle is collected with magnet, uses ultra-pure water Washing, produces Fe3O4Magnetic particle.
4. test strips according to claim 3, it is characterised in that step 2) is specially:By the μ g/mL of concentration 100 biology Plain secondary antibody is added in 50mM pH 6.0 sodium-acetate buffer, then with 5-8mg Fe3O4Magnetic particle mixes, by mixture whirlpool Rotation mixing, 4 DEG C of overnight incubations;Mixture is washed with pH7.0 PBS liquid, then the room in 50mM pH7.2 Tris buffer solutions Temperature is incubated 30-40min;Washed again with pH7.0 PBS liquid, that is, obtain biotin secondary antibody nanometer enzyme probe.
5. test strips according to claim 2, it is characterised in that step 2) and 3) described in biotin secondary antibody be goat-anti Mouse IgG;Nitrocellulose filter described in step 3) is Millipore135S.
6. according to the test strips described in claim any one of 1-5, it is characterised in that detection line is located at fine away from nitric acid in step 3) On the position for tieing up plain film lower edge 1.1cm, nature controlling line is located on the position away from nitrocellulose filter lower edge 1.6cm;Detection line The distance between nature controlling line is 4.5mm, and FITC antibody and biotin antibody are sprayed on into cellulose nitrate respectively by 1.0 μ L/cm In the detection line and nature controlling line of plain film, wherein coated antibody concentration is 0.5-2mg/mL in detection line and nature controlling line.
7. the method based on nucleic acid chromatography biosensor technique detection staphylococcus aureus, it is characterised in that including following step Suddenly:
S1, extraction testing sample DNA, using DNA as template, LAMP-PCR expansions are carried out using LAMP primer group described in claim 1 Increase reaction;
S2, the LAMP-PCR amplified productions for taking 10 μ L steps S1, claim 2-6 is added drop-wise to after being mixed with 50 μ L reaction buffers In the sample pad of any one test strips, after 5-20min, 2 drop substrate buffer solutions, reaction are added dropwise on p-wire and nature controlling line Colour developing situation, sentence read result are observed by the naked eye after 5min:Negative reaction:Nature controlling line develops the color, and detection line does not develop the color;It is positive anti- Should:Nature controlling line, detection line develop the color;Failure reaction:If nature controlling line does not develop the color, detection failure or test strips failure;
For quantitative measurment, the optics using the portable strip reader record strip band combined with band reader software is strong Degree, the content of staphylococcus aureus in testing sample is calculated according to optical strength;
Wherein, reaction buffer is described in step S2:4 × SSC, 0.2m/m% Tween-20;Contain in the substrate buffer solution 20 × DAB and 20 × H2O2
8. according to the method for claim 7, it is characterised in that the system of LAMP-PCR amplified reactions is in step S1:1× Bst Thermal Buffer, 0.6M Betaine, 0.5mM dNTPs solution, 1.6 μM of FIP, 1.6 μM of BIP, 0.2 μM of F3, 0.2 μM of B3,3.6mM MgSO4, 8U Bst archaeal dna polymerase large fragments, 2 μ L templates, ddH2O complements to 25 μ L;
LAMP-PCR response procedures are:65 DEG C of 30min, then 85 DEG C of 3min.
9. the method according to claim 7 or 8, it is characterised in that carried out before step S1, in addition to testing sample The step of nitrine propidium iodide processing, it is specially:Final concentration is added in the testing sample for containing viable bacteria or hot inactivation of bacterial to 1 μ L For 10 μ g/mL nitrine propidium iodide, lucifuge is incubated 5min, then using 500W halogen light sources by sample exposure 5min, by sample QC is remotely from light source 20cm and lain in a horizontal plane on ice, shakes sample cell every 30s to keep to the uniform of light source Exposure;Then DNA extractions are carried out.
10. the kit containing any one of LAMP primer group and/or claim the 2-6 test strips described in claim 1.
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