CN107233750B - A kind of preparation method of DNA paper folding biological chromatography column and its application in drug screening - Google Patents

A kind of preparation method of DNA paper folding biological chromatography column and its application in drug screening Download PDF

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CN107233750B
CN107233750B CN201710401978.2A CN201710401978A CN107233750B CN 107233750 B CN107233750 B CN 107233750B CN 201710401978 A CN201710401978 A CN 201710401978A CN 107233750 B CN107233750 B CN 107233750B
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silica gel
paper folding
dna
target spot
dna paper
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CN107233750A (en
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周婕
陈秀英
孙芳
孟令偿
孙冲
叶卫冉
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Zhengzhou University
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    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01DSEPARATION
    • B01D15/00Separating processes involving the treatment of liquids with solid sorbents; Apparatus therefor
    • B01D15/08Selective adsorption, e.g. chromatography
    • B01D15/10Selective adsorption, e.g. chromatography characterised by constructional or operational features
    • B01D15/20Selective adsorption, e.g. chromatography characterised by constructional or operational features relating to the conditioning of the sorbent material
    • B01D15/206Packing or coating
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    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N30/00Investigating or analysing materials by separation into components using adsorption, absorption or similar phenomena or using ion-exchange, e.g. chromatography or field flow fractionation
    • G01N30/02Column chromatography

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Abstract

The present invention relates to the preparation method of DNA paper folding biological chromatography column and its applications in drug screening, it is not high that drug screening accuracy in the prior art can effectively be solved, the problem of process complexity, method is, activated silica gel and preparation carboxylated silica gel, the single stranded DNA that target spot length is 10 ~ 30 bp is modified, by M13mp18 ssDNA, 216 staple chains, target spot compound feeds intake in PCR instrument, 35 DEG C are dropped to from 60 DEG C with the rate of 6 DEG C/min, obtain the amidized DNA paper folding for being assembled with target spot compound, by carboxylated colloidal silica dispersion in PBS solution, DCC and NHS is added to mix, it adds and assembles the amidized DNA paper folding of target spot compound, it is stirred at room temperature, with PBS solution and milli-Q water, vacuum drying, then Dress column, homogenate and displacement fluid are PBS buffer solution to get DNA paper folding biological chromatography column is arrived, and the present invention gives full play to drug effect using easy, efficient, accuracy is high.

Description

The preparation method of a kind of DNA paper folding biological chromatography column and its in drug screening Using
Technical field
The present invention relates to chromatographic column, the preparation method of especially a kind of DNA paper folding biological chromatography column and its in drug screening In application.
Background technique
Currently, be applied to drug screening model specifically include that the horizontal model of whole animal, the horizontal model of histoorgan and Cell, molecular level model.
The screening of whole animal model drug can only screen limited sample, and copy with experimental animal Pathological model it is extremely limited, there is significant limitation, poor efficiency and high cost etc. using whole animal model discrimination new drug Drawback.The horizontal model of histoorgan overcomes the deficiency of whole animal model to a certain extent, but there are still small scale, The disadvantages of low efficiency, limited reaction drug effect.Cell, molecular level medicaments sifting model be at present using more one kind Method, but since detection method is limited to, it is extremely limited for the Testing index of drug screening, and the screening model accuracy is not High (drug reaches cell rather than action target spot), screening process complicated (needing several days or even longer time), amount of samples are big (need tens to several hundred milligrams).
2006, Rothemund was put forward for the first time a kind of completely new DNA self-assembling method --- DNA paper folding art (Origami), and in Nature magazine with cover paper publishing.DNA paper folding have good biocompatibility, spatial addressability, No cytotoxicity and shape and size can explication the advantages that, in addition to this, the distinguishing feature that DNA paper folding art also has has: 1) assembling process is simple;2) multidimensional nanostructure can accurately be assembled;3) assemblnig object type is various;4) can be used for studying Field is extensive.
Since DNA paper folding has many advantages, such as that good biocompatibility, of uniform size, controlled shape, surface are easy modification, It can be effectively improved Silica Surface, more receptors or compound is enable to be bonded to Silica Surface by DNA paper folding.But such as What is anti-using the specificity between target spot (protein, biological enzyme, membrane receptor, nuclear receptor and other target spot compounds) and drug It answers, realizes drug screening, and situations such as understanding drug distribution in vivo, metabolism and design and develop there is height The drug molecule of activity, hypotoxicity is all of great significance, but so far there are no the technology public reporting.
Summary of the invention
For above situation, for the defect for overcoming the prior art, the purpose of the present invention is just to provide a kind of DNA paper folding biology The preparation method of chromatographic column and its application in drug screening, can effectively solve in the prior art that drug screening accuracy is not High, process complexity problem.
The technical solution that the present invention solves is, the method for the present invention the following steps are included:
1, activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% the 5-7 h that flows back, is washed with water to neutrality, in vacuum oven In, 12-18 h(, which is dried in vacuo, at 55-65 DEG C stays overnight), at activated silica gel, activated silica gel is placed in dry toluene, is added In gamma-aminopropyl-triethoxy-silane, under nitrogen protection, 100-120 DEG C of reflux 22-26 h washs 3 with toluene and ether respectively Secondary, 55-65 DEG C of dry 12-18 h(is stayed overnight in a vacuum drying oven), at silicon amide glue, by amination silica gel ultrasonic disperse in In 30 mL tetrahydrofurans, the succinic anhydride with gamma-aminopropyl-triethoxy-silane equimolar ratio is added, 24 h are stirred at room temperature, uses Dehydrated alcohol washs 3 ~ 5 times, and 55-65 DEG C of dry 12-18 h(is stayed overnight in a vacuum drying oven), it is described at carboxylated silica gel Silica gel partial size: 5 μm, aperture: 100-300 (commercial product such as: Qingdao Mei Gao Chemical Co., Ltd. product);
2, DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp to be modified, i.e., target spot compound contains one section of free DNA chain, Staple chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, on target spot compound Modifying DNA chain it is complementary, 5 ' ends of 3 ~ 5 staple chains with amido modified, by M13mp18 ssDNA, 216 staple chains, Target spot compound is by 1:(5-10): 1 molar ratio feeds intake in PCR instrument, is dropped with the rate of 6 DEG C/min from 60 DEG C by annealing To 35 DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound, the target spot is protein, life Object enzyme, membrane receptor, nuclear receptor and other target spot compounds;
3, the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 DCC and 5 mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 22- at room temperature The PBS solution and ultrapure water that 26 h are 7.2-7.4 with pH value wash 3 times respectively, in a vacuum drying oven 55-65 DEG C of dry 12- 18 h(are stayed overnight), obtain DNA paper folding biological chromatography medium;
4, DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is carried out Fill column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the rust steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
The chromatographic column is effective in drug screening.
The DNA paper folding chromatographic media provided by the invention for being suitable for drug screening, it is characterized in that using activated silica gel as matrix, Using the good biocompatibility of DNA paper folding, spatial addressability, the advantages that object is various and assembling process is simple can be assembled by target Point (protein, biological enzyme, membrane receptor, nuclear receptor and other target spot compounds) is assembled into DNA paper folding nanostructure, then by group The DNA paper folding for having filled target spot compound is bonded on silica matrix and obtains novel biological chromatography medium.The object assembled Can be as needed, assemble different compounds.Obtained biological chromatography medium is loaded in liquid-phase chromatographic column, one kind is obtained DNA paper folding biological chromatography column.With using it is easy, efficiently, accuracy is high and gives full play to drug effect, economic and social benefit It is huge.
Specific embodiment
The present invention will be further described in detail with reference to embodiments.
Embodiment 1
The present invention in specific implementation, is realized by following steps:
1, activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% and is flowed back 6 h, is washed with water to neutrality, in a vacuum drying oven, 15 h(are dried in vacuo at 60 DEG C to stay overnight), at activated silica gel, activated silica gel is placed in dry toluene, γ-aminopropyl is added In triethoxysilane, under nitrogen protection, 110 DEG C of 24 h of reflux are washed 3 times with toluene and ether, respectively in vacuum oven In 60 DEG C of 15 h(of drying stay overnight), at silicon amide glue, by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans, be added With the succinic anhydride of gamma-aminopropyl-triethoxy-silane equimolar ratio, 24 h are stirred at room temperature, are washed 3 ~ 5 times with dehydrated alcohol, in 60 DEG C of 15 h(of drying are stayed overnight in vacuum oven), at carboxylated silica gel;
2, DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp to be modified, i.e., target spot compound contains one section of free DNA chain, Staple chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, on target spot compound Modifying DNA chain it is complementary, 5 ' ends of 3 ~ 5 staple chains with amido modified, by M13mp18 ssDNA, 216 staple chains, Target spot compound feeds intake in PCR instrument by the molar ratio of 1:5:1, drops to 35 from 60 DEG C with the rate of 6 DEG C/min by annealing DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound;
3, the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 DCC and 5 mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 24 at room temperature The PBS solution and ultrapure water that h is 7.2-7.4 with pH value wash 3 times respectively, in a vacuum drying oven 60 DEG C of 15 h(mistakes of drying Night), obtain DNA paper folding biological chromatography medium;
4, DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is carried out Fill column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the rust steel liquid-phase chromatographic column intracavity diameter are 4.6mm, a length of 150 mm.
Embodiment 2:
The present invention in specific implementation, is realized by following steps:
1, activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% and is flowed back 5 h, is washed with water to neutrality, in a vacuum drying oven, 18 h(are dried in vacuo at 55 DEG C to stay overnight), at activated silica gel, activated silica gel is placed in dry toluene, γ-aminopropyl is added In triethoxysilane, under nitrogen protection, 100 DEG C of 26 h of reflux are washed 3 times with toluene and ether, respectively in vacuum oven In 55 DEG C of 18 h(of drying stay overnight), at silicon amide glue, by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans, be added With the succinic anhydride of gamma-aminopropyl-triethoxy-silane equimolar ratio, 24 h are stirred at room temperature, are washed 3 ~ 5 times with dehydrated alcohol, in 55 DEG C of 18 h(of drying are stayed overnight in vacuum oven), at carboxylated silica gel;
2, DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp to be modified, i.e., target spot compound contains one section of free DNA chain, Staple chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, on target spot compound Modifying DNA chain it is complementary, 5 ' ends of 3 ~ 5 staple chains with amido modified, by M13mp18 ssDNA, 216 staple chains, Target spot compound feeds intake in PCR instrument by the molar ratio of 1:8:1, drops to 35 from 60 DEG C with the rate of 6 DEG C/min by annealing DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound, the target spot be protein, biological enzyme, Membrane receptor, nuclear receptor and other target spot compounds;
3, the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 DCC and 5 mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 22- at room temperature The PBS solution and ultrapure water that 26 h are 7.2-7.4 with pH value wash 3 times respectively, in a vacuum drying oven 55 DEG C of 18 h of drying (overnight) obtains DNA paper folding biological chromatography medium;
4, DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is carried out Fill column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the rust steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
Embodiment 3
1, activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% the 5-7 h that flows back, is washed with water to neutrality, in vacuum oven In, it is dried in vacuo 12 h(at 65 DEG C and stays overnight), at activated silica gel, activated silica gel is placed in dry toluene, γ-ammonia third is added In ethyl triethoxy silicane alkane, under nitrogen protection, 120 DEG C of 22 h of reflux are washed 3 times with toluene and ether, respectively in vacuum drying 65 DEG C of 12 h(of drying are stayed overnight in case), add by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans at silicon amide glue Enter the succinic anhydride with gamma-aminopropyl-triethoxy-silane equimolar ratio, 24 h be stirred at room temperature, is washed 3 ~ 5 times with dehydrated alcohol, 65 DEG C of 12 h(of drying are stayed overnight in a vacuum drying oven), at carboxylated silica gel;
2, DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp to be modified, i.e., target spot compound contains one section of free DNA chain, Staple chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, on target spot compound Modifying DNA chain it is complementary, 5 ' ends of 3 ~ 5 staple chains with amido modified, by M13mp18 ssDNA, 216 staple chains, Target spot compound is by 1:(5-10): 1 molar ratio feeds intake in PCR instrument, is dropped with the rate of 6 DEG C/min from 60 DEG C by annealing To 35 DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound, the target spot is protein, life Object enzyme, membrane receptor, nuclear receptor and other target spot compounds;
3, the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 DCC and 5 mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 22- at room temperature The PBS solution and ultrapure water that 26 h are 7.2-7.4 with pH value wash 3 times respectively, in a vacuum drying oven 65 DEG C of 12 h of drying (overnight) obtains DNA paper folding biological chromatography medium;
4, DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is carried out Fill column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the rust steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
The DNA paper folding biological chromatography column that above-described embodiment provides is effective in drug screening.
The building of DNA paper folding refers to Paul W. K. Rothemund(Rothemund P W. in 2006 in the present invention Folding DNA to create nanoscale shapes and patterns [J]. Nature, 2006, 440: 297 ~ 302) building of rectangle paper folding in the article delivered, the single stranded circle DNA of M13 bacteriophage are 216 long as scaffold chain Short different short chain DNA is as staple chain.The present invention will in Paul W. K. Rothemund article number be 4,13,55, 63,102,106,116,123,162,170,208,212 etc. 12 staple chains use 20 base sequences at 3 ' ends (ATTCTACTTG AGAGAGCGAC) is modified, and 3 staple chains such as number 100,105,110 use amino at 5 ' ends (NH2-C6-TTTTTTTTTT) it is modified.The staple chain of other numbers is unmodified, no longer lists.
4 GAGCCGCCCC ACCACCGGAA CCGCGACGGA AAATTCTACT TGAGAGAGCG AC
13 ATCGGCTGCG AGCATGTAGA AACCTATCAT ATATTCTACT TGAGAGAGCG AC
55 CACCAGAGTT CGGTCATAGC CCCCGCCAGC AAATTCTACT TGAGAGAGCG AC
63 CAAGCAAGAC GCGCCTGTTT ATCAAGAATC GCATTCTACT TGAGAGAGCG AC
102 ACAAACAATT TTAATCAGTA GCGACAGATC GATAGCATTC TACTTGAGAG AGCGAC
106 TATAGAAGTT TTCGACAAAA GGTAAAGTAG AGAATAATTC TACTTGAGAG AGCGAC
116 TTCGCCATTG CCGGAAACCA GGCATTAAAT CAATTCTACT TGAGAG AGCG AC
123 TTTTAATTGC CCGAAAGACT TCAAAACACT ATATTCTACT TGAGAGAGCG AC
162 CAGCTGGCGG ACGACGACAG TATCGTAGCC AGATTCTACT TGAGAGAGCG AC
170 TACCTTTAAG GTCTTTACCC TGACAAAGAA GTATTCTACT TGAGAGAGCG AC
208 CACGACGTTT TTGTAATGGG ATAGGTCAAA ACGGCGATTC TACTTGAGAG AGCGAC
212 ATATAATGTT TTCATTGAAT CCCCCTCAAA TCGTCAATTC TACTTGAGAG AGCGAC
100 NH2-C6-TTTTTTTTTT TTTTTATAAG TATAGCCCGG CCGTCGAG
105 NH2-C6-TTTTTTTTTT GCGCATTATT TTGCTTATCC GGTATTCTAA ATCAGA
110 NH2-C6-TTTTTTTTTT GATGGCAATT TTAATCAATA TCTGGTCACA AATATC
The above-mentioned embodiment provided is only for illustrating a specific embodiment of the invention, is not intended to limit the invention Protection scope, it is all in itself it is identical with technical solution of the present invention it is various improve, transformation or substitution belong to the present invention Protection scope, it is very good that the present invention is tested its effect, and easy to use, accuracy is high, and high-efficient, relevant information is as follows:
Experiment 1:
For the present invention by taking target spot compound is bovine serum albumin(BSA) as an example, specific experiment situation is as follows:
DNA paper folding biological chromatography column (target spot compound therein is bovine serum albumin(BSA)) in this experiment using preparation is to Ah Department woods is analyzed under conditions of phosphate buffer is mobile phase, and aspirin is in new bio chromatographic column of the present invention With a hook at the end on (using bovine serum albumin(BSA) as target spot), retention time is 3.937 min;Aspirin does not have on silica gel chromatographic column Retain, with etoh solvent appearance.Chromatographic condition is as follows: mobile phase is the phosphate buffer of 20mM, and flow velocity is 0.8 mL/ Min, 30 DEG C of column temperature, the concentration of aspirin is 0.1 mg/mL, and sampling volume is 20 μ L.
Aspirin produces the spy of receptor-ligand with BSA on Novel DNA paper folding biological chromatography column prepared by the present invention Different affinity interaction, and aspirin does not retain on silica gel chromatographic column, with solvent appearance.Aspirin is in two chromatographic columns The difference of upper retention time, illustrate silica gel itself be to aspirin it is uncensored, in Novel DNA paper folding prepared by the present invention Reservation on biological chromatography column is its specific effect between BSA.Compared to directly biologically active BSA is bonded to The method of drug is screened or is analyzed on inorganic silica gel surface, and method provided by the present invention is by being assembled into DNA paper folding for BSA On, then be bonded on carboxylated silica gel by the effect of EDC and NHS, nothing is effectively improved using the biocompatibility of DNA paper folding The surface of machine silica gel can effectively keep the bioactivity of BSA.And compared to traditional medicaments sifting model, system of the present invention Standby Novel DNA paper folding biological chromatography column can be analyzed directly using high performance liquid chromatograph, so that this screening technique is more Accurately (drug go directly action target spot), easy (can be analyzed within 15 min), detection method is sensitive, and (sample volume is 20 μ G), analysis result is more intuitive, and also environmental protection is easy to get the mobile phase used.In addition to this, drug sieve provided by the present invention Modeling type is for the first time to share DNA paper folding and liquid chromatograph in drug screening, therefore drug screening provided by the present invention Model is more innovative.
Experiment 2:
The DNA paper folding biological chromatography column (target spot therein that the present invention is prepared using target spot compound as the lipase of biological enzyme Compound is lipase) scutelloside is analyzed under conditions of phosphate buffer is mobile phase.Scutelloside is in the present invention With a hook at the end on biological chromatography column (using lipase as target spot), retention time is 9.733 min;Aspirin is on silica gel chromatographic column Do not retain, with solvent methanol appearance.Chromatographic condition is as follows: mobile phase is the phosphate buffer of 20 mM, flow velocity 0.4 ML/min, column temperature are 30 DEG C, and the concentration of scutelloside is 0.1mg/mL, and sampling volume is 20 μ L.
Scutelloside produces the special of receptor-ligand with lipase on DNA paper folding biological chromatography column prepared by the present invention Affinity interaction, and scutelloside does not retain on silica gel chromatographic column, with solvent appearance.Scutelloside retains in two chromatographic columns The difference of time, illustrate silica gel itself be to scutelloside it is uncensored, on DNA paper folding biological chromatography column prepared by the present invention Reservation be its specific effect between lipase.It will be biologically active lipase bonded to inorganic silicon compared to directly The method of drug is screened or is analyzed on glue surface, method provided by the present invention by the way that lipase is assembled into DNA paper folding, then It is bonded on carboxylated silica gel by the effect of EDC and NHS, effectively improves inorganic silicon using the biocompatibility of DNA paper folding The surface of glue can effectively keep the bioactivity of lipase.And compared to traditional medicaments sifting model, present invention preparation Novel DNA paper folding biological chromatography column can directly be analyzed using high performance liquid chromatograph so that this screening technique is more quasi- Really (drug go directly action target spot), easy (can be analyzed within 15 min), detection method is sensitive, and (sample volume is 20 μ G), analysis result is more intuitive, and the mobile phase used is nontoxic, is easy to get.In addition to this, drug screening provided by the present invention Model is for the first time to share DNA paper folding and liquid chromatograph in drug screening, therefore drug sieve modeling provided by the present invention Type is more innovative.
In conclusion the present invention relates to a kind of preparation of DNA paper folding biological chromatography column, and utilize the target spot (egg of its assembling White matter, biological enzyme, membrane receptor, nuclear receptor and other target spot compounds) and drug between specificity realize the screening of drug. Present invention utilizes the efficient, easy of the plurality of advantages of DNA paper folding and liquid chromatogram, compared to cell used at present, point Sub horizontal medicaments sifting model, this drug screening method have more the through action target spot of accuracy drug, make full use of drug big Curative effect is improved greatly, and utilization ratio of drug improves dozens or even hundreds of times, and at low cost, amount of samples is reduced thousands of times, has very strong Use value, economic and social benefit is huge.
SEQUENCE LISTING
<110>Zhengzhou University
<120>a kind of preparation method of DNA paper folding biological chromatography column and its application in drug screening
<160> 15
<210> 4
<211> 52
<212> DNA
<213>artificial sequence
<400> 4
GAGCCGCCCC ACCACCGGAA CCGCGACGGA AAATTCTACT TGAGAGAGCG AC 52
<210> 13
<211> 52
<212> DNA
<213>artificial sequence
<400> 13
ATCGGCTGCG AGCATGTAGA AACCTATCAT ATATTCTACT TGAGAGAGCG AC 52
<210> 55
<211> 52
<212> DNA
<213>artificial sequence
<400> 55
CACCAGAGTT CGGTCATAGC CCCCGCCAGC AAATTCTACT TGAGAGAGCG AC 52
<210> 63
<211> 52
<212> DNA
<213>artificial sequence
<400> 63
CAAGCAAGAC GCGCCTGTTT ATCAAGAATC GCATTCTACT TGAGAGAGCG AC 52
<210> 102
<211> 56
<212> DNA
<213>artificial sequence
<400> 102
ACAAACAATT TTAATCAGTA GCGACAGATC GATAGCATTC TACTTGAGAG AGCGAC 56
<210> 106
<211> 56
<212> DNA
<213>artificial sequence
<400> 106
TATAGAAGTT TTCGACAAAA GGTAAAGTAG AGAATAATTC TACTTGAGAG AGCGAC 56
<210> 116
<211> 52
<212> DNA
<213>artificial sequence
<400> 116
TTCGCCATTG CCGGAAACCA GGCATTAAAT CAATTCTACT TGAGAG AGCG AC 52
<210> 123
<211> 52
<212> DNA
<213>artificial sequence
<400> 123
TTTTAATTGC CCGAAAGACT TCAAAACACT ATATTCTACT TGAGAGAGCG AC 52
<210> 162
<211> 52
<212> DNA
<213>artificial sequence
<400> 162
CAGCTGGCGG ACGACGACAG TATCGTAGCC AGATTCTACT TGAGAGAGCG AC 52
<210> 170
<211> 52
<212> DNA
<213>artificial sequence
<400> 170
TACCTTTAAG GTCTTTACCC TGACAAAGAA GTATTCTACT TGAGAGAGCG AC 52
<210> 208
<211> 56
<212> DNA
<213>artificial sequence
<400> 208
CACGACGTTT TTGTAATGGG ATAGGTCAAA ACGGCGATTC TACTTGAGAG AGCGAC 56
<210> 212
<211> 56
<212> DNA
<213>artificial sequence
<400> 212
ATATAATGTT TTCATTGAAT CCCCCTCAAA TCGTCAATTC TACTTGAGAG AGCGAC 56
<210> 100
<211> 38
<212> DNA
<213>artificial sequence
<400> 100
NH2-C6-TTTTTTTTTT TTTTTATAAG TATAGCCCGG CCGTCGAG 38
<210> 105
<211> 46
<212> DNA
<213>artificial sequence
<400> 105
NH2-C6-TTTTTTTTTT GCGCATTATT TTGCTTATCC GGTATTCTAA ATCAGA 46
<210> 110
<211> 46
<212> DNA
<213>artificial sequence
<400> 110
NH2-C6-TTTTTTTTTT GATGGCAATT TTAATCAATA TCTGGTCACA AATATC 46

Claims (5)

1. a kind of preparation method of DNA paper folding biological chromatography column, which comprises the following steps:
(1), activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% the 5-7 h that flows back, is washed with water to neutrality, in a vacuum drying oven, in It is dried in vacuo 12-18 h at 55-65 DEG C activated silica gel is placed in dry toluene at activated silica gel, γ-aminopropyl three is added In Ethoxysilane, under nitrogen protection, 100-120 DEG C of reflux 22-26 h is washed 3 times respectively with toluene and ether, dry in vacuum 55-65 DEG C of dry 12-18 h in dry case, at silicon amide glue, by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans, The succinic anhydride with gamma-aminopropyl-triethoxy-silane equimolar ratio is added, 24 h are stirred at room temperature, wash 3 ~ 5 with dehydrated alcohol It is secondary, 55-65 DEG C of dry 12-18 h in a vacuum drying oven, at carboxylated silica gel, described silica gel partial size: 5 μm, aperture: 100-300 Å;
(2), DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp is modified, i.e., target spot compound contains one section of free DNA chain, stapler Nail chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, with repairing on target spot compound Adorn that DNA chain is complementary, 5 ' ends of 3 ~ 5 staple chains are with amido modified, by M13mp18 ssDNA, 216 staple chains, target spots Compound is by 1:(5-10): 1 molar ratio feeds intake in PCR instrument, drops to 35 from 60 DEG C with the rate of 6 DEG C/min by annealing DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound, the target spot be protein, biological enzyme, Membrane receptor, nuclear receptor and other target spot compounds;
(3), the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg DCC and 5 are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 Mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 22-26 h at room temperature, is used PH value is that the PBS solution of 7.2-7.4 and ultrapure water wash 3 times respectively, and 55-65 DEG C of dry 12-18 h, obtains in a vacuum drying oven DNA paper folding biological chromatography medium;
(4), DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is filled Column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the stainless steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
2. the preparation method of DNA paper folding biological chromatography column according to claim 1, which is characterized in that by following steps reality It is existing:
(1), activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% 6 h that flow back, is washed with water to neutrality, in a vacuum drying oven, in 60 It is dried in vacuo 15 h at DEG C, at activated silica gel, activated silica gel is placed in dry toluene, gamma-aminopropyl-triethoxy silicon is added In alkane, under nitrogen protection, 110 DEG C of 24 h of reflux are washed 3 times, 60 DEG C of dryings in a vacuum drying oven respectively with toluene and ether 15 h by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans, are added and three ethoxy of γ-aminopropyl at silicon amide glue The succinic anhydride of base silane equimolar ratio, is stirred at room temperature 24 h, is washed 3 ~ 5 times, in a vacuum drying oven 60 DEG C with dehydrated alcohol Dry 15 h, at carboxylated silica gel;
(2), DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp is modified, i.e., target spot compound contains one section of free DNA chain, stapler Nail chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, with repairing on target spot compound Adorn that DNA chain is complementary, 5 ' ends of 3 ~ 5 staple chains are with amido modified, by M13mp18 ssDNA, 216 staple chains, target spots Compound is by 1:(5-10): 1 molar ratio feeds intake in PCR instrument, drops to 35 from 60 DEG C with the rate of 6 DEG C/min by annealing DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound;
(3), the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg DCC and 5 are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 Mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 24 h at room temperature, use pH Value is that the PBS solution of 7.2-7.4 and ultrapure water wash 3 times respectively, and 60 DEG C of 15 h of drying, obtain DNA paper folding in a vacuum drying oven Biological chromatography medium;
(4), DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is filled Column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the stainless steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
3. the preparation method of DNA paper folding biological chromatography column according to claim 1, which is characterized in that by following steps reality It is existing:
(1), activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% 5h that flows back, is washed with water to neutrality, in a vacuum drying oven, in 55 It is dried in vacuo 18 h at DEG C, at activated silica gel, activated silica gel is placed in dry toluene, gamma-aminopropyl-triethoxy silicon is added In alkane, under nitrogen protection, 100 DEG C of 26 h of reflux are washed 3 times, 55 DEG C of dryings in a vacuum drying oven respectively with toluene and ether 18 h by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans, are added and three ethoxy of γ-aminopropyl at silicon amide glue The succinic anhydride of base silane equimolar ratio, is stirred at room temperature 24 h, is washed 3 ~ 5 times, in a vacuum drying oven 55 DEG C with dehydrated alcohol Dry 18 h, at carboxylated silica gel;
(2), DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp is modified, i.e., target spot compound contains one section of free DNA chain, stapler Nail chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, with repairing on target spot compound Adorn that DNA chain is complementary, 5 ' ends of 3 ~ 5 staple chains are with amido modified, by M13mp18 ssDNA, 216 staple chains, target spots Compound is by 1:(5-10): 1 molar ratio feeds intake in PCR instrument, drops to 35 from 60 DEG C with the rate of 6 DEG C/min by annealing DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound, the target spot be protein, biological enzyme, Membrane receptor, nuclear receptor and other target spot compounds;
(3), the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg DCC and 5 are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 Mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 22-26 h at room temperature, is used PH value is the PBS solution of 7.2-7.4 and ultrapure water washs 3 times respectively, and 55 DEG C of 18 h of drying, obtain DNA folding in a vacuum drying oven Paper biological chromatography medium;
(4), DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is filled Column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the stainless steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
4. the preparation method of DNA paper folding biological chromatography column according to claim 1, which is characterized in that by following steps reality It is existing:
(1), activated silica gel and preparation carboxylated silica gel:
Silica gel is placed in the hydrochloric acid that volumetric concentration is 20% the 5-7 h that flows back, is washed with water to neutrality, in a vacuum drying oven, in It is dried in vacuo 12 h at 65 DEG C, at activated silica gel, activated silica gel is placed in dry toluene, gamma-aminopropyl-triethoxy is added In silane, under nitrogen protection, 120 DEG C of 22 h of reflux are washed 3 times respectively with toluene and ether, are done for 65 DEG C in a vacuum drying oven Dry 12 h by amination silica gel ultrasonic disperse in 30 mL tetrahydrofurans, is added and three second of γ-aminopropyl at silicon amide glue The succinic anhydride of oxysilane equimolar ratio, is stirred at room temperature 24 h, washs 3 ~ 5 times with dehydrated alcohol, and in a vacuum drying oven 65 DEG C dry 12 h, at carboxylated silica gel;
(2), DNA paper folding assembles target spot:
The single stranded DNA that target spot length is 10 ~ 30 bp is modified, i.e., target spot compound contains one section of free DNA chain, stapler Nail chain has 216, wherein 5 ' ends of 12 staple chains are modified with one section of free single stranded DNA, with repairing on target spot compound Adorn that DNA chain is complementary, 5 ' ends of 3 ~ 5 staple chains are with amido modified, by M13mp18 ssDNA, 216 staple chains, target spots Compound is by 1:(5-10): 1 molar ratio feeds intake in PCR instrument, drops to 35 from 60 DEG C with the rate of 6 DEG C/min by annealing DEG C to get to the amidized DNA paper folding nanostructure for being assembled with target spot compound, the target spot be protein, biological enzyme, Membrane receptor, nuclear receptor and other target spot compounds;
(3), the DNA paper folding for assembling target spot is bonded carboxylated silica gel:
6 mg DCC and 5 are added in the PBS solution that pH value is 7.2-7.4 in carboxylated silica gel ultrasonic disperse prepared by step 1 Mg NHS is mixed, and is added and is assembled amidized 4 mg of DNA paper folding of target spot compound, stirs 22-26 h at room temperature, is used PH value is the PBS solution of 7.2-7.4 and ultrapure water washs 3 times respectively, and 65 DEG C of 12 h of drying, obtain DNA folding in a vacuum drying oven Paper biological chromatography medium;
(4), DNA paper folding biological chromatography column is made in dress column:
Stainless steel liquid-phase chromatographic column is taken, at 10 ~ 20 MPa, DNA paper folding biological chromatography medium prepared by step 3 is filled Column, the homogenate and displacement fluid for filling column be pH value be 7.2-7.4 PBS buffer solution to get to DNA paper folding biological chromatography Column, the stainless steel liquid-phase chromatographic column intracavity diameter are 4.6 mm, a length of 150 mm.
5. application of the DNA paper folding biological chromatography column of claim 1 the method preparation in drug screening.
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