A kind of Chinese tamarisk salt stress response key gene TcARF6 and its application
Technical field
The invention belongs to field of plant genetic, and in particular to a kind of Chinese tamarisk salt stress responds key gene
TcARF6 and its application.
Background technology
China there are about more than 20 ten thousand square kilometres of salt-soda soils and in continuous increase, and salt-soda soil can not be utilized in agricultural production
The contradiction that population increased requirement can not be met by causing China's grain-production is becoming increasingly acute, the plant in active demand High Efficiency Reform salt-soda soil
Goods and materials source;Chinese tamarisk is China's indigenous tree, belongs to one of salt tolerance most strong xylophyta, is maintaining the beach such as the Huanghe delta
Important function weight has been played in the Ecological Stabilization of wetland Saline Region, has been also the valuable source that China coast shelter-forest builds.
Although in willow, paddy rice isotype species, there is the correlative study of many resistant gene of salt, part resistant gene of salt passes through transgenosis skill
Art high efficient expression, but the effect that the genetically modified plants salt tolerance of these genes of application is improved at present is unsatisfactory, it is impossible to meet
Demand in actual production and be difficult to promote, this may not evolve the special salt tolerant of similar halophytes with glycophyte
Mechanism is relevant.There is Chinese tamarisk uniqueness to secrete molecules of salt mechanism and corresponding stress response gene, to plant salt tolerance study mechanism meaning
It is great, can be provided fundamental basis and resistant gene resource for salt lick desalination, adversity resistant plant breeding, at present Tamarix other
Cloned in plant species and obtained tens important resistant gene of salt and transcription factor, weight is provided for plant salt tolerance breeding
Want molecule resource, but not yet have the report of resistant gene of salt in China's distribution area most wide Chinese tamarisk, in the urgent need to exploitation Chinese tamarisk
Resistant gene of salt.
ARF transcription factors are the distinctive transcription factor families of plant, and are widely present and have between different plant species
Necessarily conservative property, goes in approach in the auxin signal of plant and plays a significant role, and adjusts the table of the lots of genes in downstream
Reach.ARF functional studies are mostly derived from growing and morphogenesis research, mesh for the native plant in the fields such as arabidopsis, paddy rice, willow
Before, numerous studies show that ARF families are coerced by the post-transcriptional control mechanism regulating such as microRNA and trans-acting siRNA s
Expression under compeling, and then induce a large amount of plant salt tolerance genes in downstream so that plant improves salt tolerance.Meanwhile, ARF family
Race causes family member's substantial amounts due to gene expansion event, and member has obvious functional redundancy between, increases pair
The parsing difficulty of specific ARF gene functions, certain interference is caused to the resistant gene of salt selection in follow-up transgenic research.Enter
The research of row Chinese tamarisk ARF families will be helpful to people and deeply understand Auxin Signal Tranducation approach under halophytes environment stress
Mechanism of action, it helps heighten people and the not high redundancy gene of salt tolerance is removed in breeding for stress tolerance, important resistance to alkali is screened
The identification capability of cause.
At present, not yet there is the ARF families relevant report of Tamarix, clone and develop these genetic resourceses, no
Only help to illustrate forest salt tolerant molecular Regulation Mechanism, and forest molecular breeding process can also be promoted, salt-soda soil is utilized and
The development of agricultural has immeasurable value.
The content of the invention
Goal of the invention:For the deficiencies in the prior art, it is an object of the invention to provide a kind of Chinese tamarisk salt stress sound
Key gene TcARF6 is answered, use demand is met.Closed it is a further object of the present invention to provide a kind of above-mentioned Chinese tamarisk salt stress response
Key gene TcARF6 application.
Technical scheme:In order to realize foregoing invention purpose, the technical solution adopted by the present invention is as follows:
A kind of Chinese tamarisk salt stress responds key gene TcARF6, and its nucleotide sequence is as shown in SEQ ID NO.1.
Described Chinese tamarisk salt stress response key gene TcARF6 expressing protein, its amino acid sequence such as SEQ ID
Shown in NO.2.
Carrier containing described Chinese tamarisk salt stress response key gene TcARF6.
5 ' end assembling composing type strongly expressed promoter P35Ss of the carrier in TcARF6 genes.
The carrier assembles strong terminator NOS at 3 ' ends of TcARF6 genes.
The carrier assembles HPT expression casettes, and as the selection markers of genetically modified plants, transgenosis is carried out with hygromycin
The screening of plant.
The carrier assembles LB and RB sequences, promotes to assemble TcARF6 gene expression constructs and selection markers base therebetween
Because HPT is integrated into dicotyledon recipient cell chromosome.
Applications of the described salt stress response key gene TcARF6 in plant resistance to environment stress breeding.
Beneficial effect:Compared with prior art, the present invention passes through RACE skills using the Chinese tamarisk of Chinese tamarisk salt stress processing as material
Art has cloned TcARF6 genes.By Quantitative Real-Time TaqMan PCR Technique, detection TcARF6 genes are after Chinese tamarisk is forced
Expression pattern, verifies the key of its response stress.Meanwhile, using its Chinese tamarisk Overexpression vector of gateway technique constructions
PH35GS-TcARF6, under promoter P35GS driving, TcARF6 can in transgenosis high efficient expression.Salt stress response process
In TcARF6 relative quantifications, show TcARF6 only the specificity in root be rapid to lower expression, demonstrate the gene and rung in stress
Key effect in answering, turning resistance breeding field in forest has significant application value.
Brief description of the drawings
Fig. 1 is the expression pattern figure under the salt stress of TcARF6 genes;
Fig. 2 is plant expression vector pH35GS structure charts.
Embodiment
With reference to specific embodiment, the present invention is described further.
Embodiment 1
1st, TcARF6 genes are cloned by RACE technologies
Result of study is sequenced based on existing Chinese tamarisk salt stress transcript profile, the RACE primers of 5 ' and 3 ' ends are designed, obtained
Responsively PCR primer, is cloned into T- carriers, is sequenced after carrying out positive-selecting to Insert Fragment, sequencing result sequence passes through
Overlay region is spliced, and obtains cNDA total lengths.RNA is derived from
TcARF6RACE primers:
RACE Adaptor contain unique design Adaptor Primer sequences (5 '-
CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT-3 ') it is easy to design primer.
3 ' RACE forward primers:
Outer Primer:5’-TACAGCATCCTCAACAGCAAATGGT-3’;
Inner Primer:5'-TAGACATGGTTGGTACAGACTC-3’;
3 ' RACE reverse primers:
Outer Primer:5'-CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT-3’;
Inner Primer:5-'CTAATACGACTCACTATAGGGC-3’;
5 ' RACE forward primers:
Outer Primer:5'-CTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGT-3’;
Inner Primer:5'-CTAATACGACTCACTATAGGGC-3’;
5 ' RACE reverse primers:
Outer Primer:5'-ACCATCGGGCTCTTCCAGTGTAGTTA-3’;
Inner Primer:5'-AATCTGTCTTTCGGCTATCTCC-3’.
1) 3'RACE courses of reaction:
(1) in reverse transcription, the small centrifuge tube that following component is added to a RNase-free being placed on ice:1μg
Total RNA (are extracted from Chinese tamarisk blade and obtained), 4 μ L dNTP Mix, 2 μ L 3'RACEAdapter, 2 μ L 10X RT
Buffer, 1 μ L RNase Inhibitor, 1 μ L M-MLV Reverse Transc riptase, Nuclease-free
Water is mended to 20 μ L.
(2) gently mix, of short duration centrifugation, 42 DEG C of incubation 1h;Into PCR steps, or -20 DEG C of preservation reactants;
(3) 3'RACE nest-type PRCs;
Reaction system is:50 μ L Outer 3'RACE compositions:5.0μL 10×LA PCR Buffer(Mg2+Free),
5.0μL MgCl2(25mM), 8.0 μ L dNTP Mixture (each 2.5mM), 2.0 μ L 3'RACE gene-specific
Outer primer, 2.0 μ L 3'RACE Outer Primer (10 μM), 1 μ L RT reaction product, 0.5 μ L
TakaRa LA Taq (5U/ μ L), 26.5 μ L Nuclease-free Water.
50 μ L Inner 3'RACE compositions:5.0μL 10×LA PCR Buffer(Mg2+Free), 5.0 μ L M gCl2
(25mM), 8.0 μ L dNTP Mixture (each 2.5mM), 2.0 μ L 3'RACE gene specific in ner
The μ L Outer 3'RACE PCR of primer, 2.0 μ L 3'RACE Inner Primer (10 μM), 1 product, 0.5 μ L
TakaRa LA Taq (5U/ μ L), 26.5 μ L Nuclease-free Water.
Response procedures:94℃3min;94 DEG C of 30sec, 60 DEG C of 30sec, 72 DEG C of 1min, 35cycles;72℃7min.
(4) coupled reaction of purified fragments and cloning vector
Target DNA molecule is cloned using the pMD19-T simple Vetor of TaKaRa companies, reference explanation book, connection is anti-
System is answered slightly to be improved with program.
Reaction system (5 μ L):The PCR primer that 2.2 μ L purifying is reclaimed, 0.3 μ L pMD-19Simple Vector, 2.5 μ L
Solution I。
Reaction condition:16℃30min;4 DEG C overnight.
(5) Escherichia coli convert:By fresh preparation or -70 DEG C of Escherichia coli TOP10 competent cells frozen on ice
Melt;The connection product of 5 μ L purified fragments and cloning vector is taken, is added in 100 μ L competent cells, and gently mix, ice
Bathe 30min or so;Thermal shock 90sec in 42 DEG C of water-baths, is immediately placed in 3-5min on ice;Add 800 μ L LB fluid nutrient mediums, 37
DEG C &100rmp shakes bacterium 1h;4000rmp centrifuges 3min, sops up the μ L culture mediums of upper strata 800, mixes remaining bacterium solution;Bacterium solution is applied to
On LB sifting motion cultivation plates containing Amp, 37 DEG C of inversion overnight incubations.
(6) positive colony screening and sequencing analysis
From picking individual colonies on sifting motion cultivation plate are inoculated in LB fluid nutrient mediums, 37 DEG C &250rmp shake bacterium and stayed overnight;Directly
The PCR detections of recombinant conversion are carried out by template of the bacterium solution of overnight incubation.
Reaction system (20.0 μ L):2.0μL 10×PCR Buffer(Mg2+Free), 1.5 μ L MgCl2(25mM), 1.3 μ
L dNTP Mixture (each 2.5mM), 1.0 μ L 3'RACE gene specific inner primer (10 μM), 1.0 μ
L 3'RACE Inner Primer (10 μM), 0.1 μ L bacterium solutions, 1.0 μ L rTaq, 12.1 μ L Milli-Q Water,
Response procedures:94℃3min;94 DEG C of 30sec, 60 DEG C of 30sec, 72 DEG C of 1min, 28cycles;72℃7min.
Clone Song Ying fine horses biotech company (Shanghai) sequencing identification of bacterium solution PCR test positive.
2) 5'RACE courses of reaction
(1) RNA processing:CIP is reacted, and following composition is added in RNase-free small centrifuge tube:10μg Total
RNA, 2 μ L 10X CIP buffer, 2 μ L Calf Intestine Alkaline Phosphatase (CIP), Nuclease-
Free Water to 20 μ L.
(2) gently mix, of short duration centrifugation;37 DEG C of incubation 1h;
(3) add following reagent and react centrifuge tube to CIP:15 μ L Ammonium Acetate Solution, 115 μ L
Nuclease-free Water, 150 μ L acid phenol:chloroform.
(4) fully it is vortexed, room temperature high speed centrifugation (≤10000g) 5min;
(5) transfer upper strata aqueous phase adds 150 μ l chloroforms, is fully vortexed into a new centrifuge tube, room temperature high speed centrifugation
(≧10000g)5min;
(6) transfer upper strata aqueous phase adds 150 μ l isopropanols, is fully vortexed into a new centrifuge tube, ice bath 10min;
(7) maximum (top) speed centrifugation 20min, is precipitated with 70% alcohol flushing of 0.5ml precoolings, maximum (top) speed centrifugation 5min,
It is careful to abandon ethanol, the dry precipitation of gas;
(8) it is resuspended and is precipitated with 11 μ L Nuclease-free Water, produce CIP ' RNA, is placed be further used on ice
TAP reacts, or -20 DEG C of preservations;
(9) TAP reacts, in the small centrifuge tube for following component being added to a RNase-free:5μL CIP’d RNA
(from f above), 1 μ L 10X TAP buffer, 2 μ L Tobacco Acid Pyrophosphatase (TAP), 2 μ L
Nuclease-free Water;
(10) gently mix, of short duration centrifugation, 37 DEG C of incubation 1h produce CIP/TAP-treated RNA;Into joint connection
Step, or -20 DEG C of preservation reactants;
(11) 5'RACE joints are connected, in the small centrifuge tube for following component being added to a RNase-free:2μL
CIP/TAP-treated RNA, 1 μ L 5'RACE Adapter, 1 μ L 10 × RNA Ligase Buffer, 2 μ L T4RNA
Ligase (2.5U/ μ l), 4 μ L Nuclease-free Water.
(12) gently mix, of short duration centrifugation, 37 DEG C of incubation 1h produce Ligated RNA;Into reverse transcription step, or -20
DEG C preserve reactant.
3) reverse transcription
(1) following component is added in a RNase-free being placed on ice small centrifuge tube:2μL Ligated
RNA, 4 μ L dNTP Mix, 2 μ L Random Decamers, 2 μ L 10X RT Buffer, 1 μ L RNase Inhibitor, 1 μ
L M-MLV Reverse Transcriptase, Nuclease-free Water are mended to 20 μ L.
(2) gently mix, of short duration centrifugation;42 DEG C of incubation 1h, produce RT reaction;Into PCR steps, or -20 DEG C of guarantors
Deposit reactant.
(3) 5'RACE nest-type PRCs:Reaction system, reaction condition are consistent with 3'RACE nest-type PRC.
(4) PCR primer cloning and sequencing, operation is consistent with 3'RACE clones.
Splicing is compared to 3'RACE and 5'RACE sequences, and predicts that it is read using NCBI-ORFfinder instruments
Frame.According to full length gene primers (amplicon includes initiation codon and terminator codon), TcARF6 genes are carried out
Full-length clone.
TcARF6ORF forward primers:5'-ATGAAGCTTTCCTCAGCAGGT-3’;
TcARF6ORF reverse primers:5'-CTAAAACTCAAGTGAATCCAG-3'.
TcARF6 full length cDNA sequences are 3704bp, and its sequence is complete comprising 2631bp as shown in SEQ ID NO.1
Whole reading frame (such as Fig. 1), the amino acid sequence of corresponding TcARF6 albumen is 877AA, and its sequence is as shown in SEQ ID NO.2.
Embodiment 2
Mutually being responded in salt stress for TcARF6 genes, the ORF based on TcARF6 genes are verified by fluorescent quantitative pcr technology
Fluorescence quantification PCR primer is designed in region, and the TIFY genes design internal control primer based on Chinese tamarisk, sequence is as follows:
TcARF6 forward primers:5’-TCTGGGCATTCGGCGAGCTA-3’;
TcARF6 reverse primers:5'-GCGGCTATTTGTCGCTGCTG-3’;
TIFY forward primers:5’-TGGAGTAACTGAACCAGGGAGGAG-3’;
TIFY forward primers:5’-GGCTGTAGGTGCCTGAACTGG-3’.
Using saturable dye evagreen (Biotium companies) and quantitative real time PCR Instrument Viia7 (ABI companies), inspection in real time
Survey the fluorescence intensity of PCR processes, specific PCR system is with reference to evagreen specifications, by comparing TcARF6 genes and internal reference
The period of fluorescence threshold is reached to calculate the relative expression quantity of determination TcARF6 genes.Wherein, pcr template is different tissues
The cDNA that mRNA reverse transcriptions are obtained, sample of tissue is from Chinese tamarisk cuttage seeding without processing, clear water processing, salt treatment 0.5 hour, salt treatment
1 hour with the salt treatment root of 4 hours, stem, leaf, obtained quantitative result as shown in figure 1, TcARF6 genes are special in Chinese tamarisk root
Property expression (salt treatment 0.5 hour and 1 hour expression quantity are adjusted downward to 0.5 or so, salt treatment 4 hours is notable be lowered to 0.04),
Constitutive expression (expression quantity faint change between 0.81-1.11) in leaf and stem, illustrates that the gene is specific in Chinese tamarisk root
Ground responds rapidly to the salt stress in environment.
Embodiment 3TcARF6 gene plant expression vector establishments
Utilize the Overexpression vector of gateway technique construction TcARF6 genes.Use specific PCR primers (TcARF6ORF
Primer), using cDNA as template, enter performing PCR amplification, TcARF6 genes ORF is building up to entry vector.Entry vector is
pCRTM8/GW/TOPOTM vector(Invitrogen).Reaction system is:Fresh PCR product(purified)10-
20ng;Salt solution 1μL;pCRTM8/GW/TOPOTM vector 1μL;Plus sterile ddH2O supplies 6 μ L.Reaction interval
Sequence is:It is stored at room temperature 30min.
Picking positive colony enters performing PCR detection and sequence verification from sifting motion cultivation plate, and the introduction with TcARF6 genes is carried
Body carries out LR reactions with plant expression vector pH35GS.Vector plasmid is as shown in Figure 2.Reaction system is:linearized
entry clone 100ng;purified destination vector(100ng/μL)1.5μL;LR Clonase II
enzyme mix 2μL;Plus TE (pH 8.0) supplies 10 μ L.Reaction condition:25℃1h.TcARF6 channel genes after being reacted through LR
In plant expression vector pH35GS, in 5 ' end assembling composing type strongly expressed promoter P35S of TcARF6 genes, it can make
TcARF6 genes high efficient expression in plant;Strong terminator NOS is assembled at 3 ' ends of TcARF6 genes, can effectively be terminated
The transcription of TcARF6 genes;, can be with as the selection markers of genetically modified plants in vector plasmid over-assemble HPT expression casettes
The screening of transfer-gen plant is carried out with hygromycin;LB and RB sequences are assembled in vector plasmid, promote to assemble TcARF6 therebetween
Gene expression construct and riddled basins HPT are integrated into recipient plant cell chromosome.Detected and be sequenced by PCR and tested
Card, confirms the success of overexpression vector construction, is named as pH35GS-TcARF6, the gene is located at after promoter P35S, is opening
Under mover P35S driving, TcARF6 can in plant high efficient expression.
SEQUENCE LISTING
<110>Nanjing Forestry University
<120>A kind of Chinese tamarisk salt stress response key gene TcARF6 and its application
<130> 100
<160> 17
<170> PatentIn version 3.3
<210> 1
<211> 3704
<212> DNA
<213> Tamarix chinensis Lour
<400> 1
gatcgcatat taatttgctc tccttgcata ttaaatgaca acaaaaagta atggcagttg 60
gcctttgatt gattgaagcg gctgatgaaa aaatgaaact ataatcgtac ttacacagga 120
acgaagcagt gctattcctt tgaattagca tcacttttta ctcctatatt ttgttgtgtt 180
tctaaaacag agctggccag tgcttcattc acttcaagca tgcggcagag ccgtcgagat 240
ctggcttgtc tagtacttcg gtgaatgtgt tttctgtgtt tttgggaaca gaaagggttt 300
tgtgctttta cttacttcct gtgtaagctg ttgctttcat tttggtgctt agtgttagca 360
tttgagatct gtctgatttg cttcctttaa tgtattgcaa tcgaagttat agtggttgag 420
tgggttgctt actcggagct ttgagttgaa atgagtttat taagctgtta aatgttttat 480
ttttcttctt tttataaaat atgaagttcg tagttcaatt ttgggtctgc gggaggtggg 540
ttggggaagc tggaagggga tgaggctgaa atcgatccga tttattagga atacaggttt 600
tgtttgagct tgtgggaggg cggtaagggc ctttgatgaa gattttatga attagtttct 660
cttcagggtg ggtttcattt ggggctgtgc tggtaaatta tgataattag gagagaggag 720
atagccgaaa gacagattgt tttgtggtgt gggtgtgagg tcaagtttct actgctgggc 780
tattttgggg gttagaatag tcgattgtgt ctggctttct gaccgatcta cggcggagtt 840
tcggtaaaat atgaagcttt cctcagcagg ttttagtcct cagccacaag aaggggtgaa 900
gaaatgtttg aactctgaat tatggcatgc atgtgctggt ccactagttt ctcttcctgc 960
tgtgggcagt catgtcgttt atttccccca gggacacagt gagcaggttg ctgcatccac 1020
caacagagaa gtggatgccc agactcctaa ctatccgacc ttactacctc aactcatctg 1080
tcagcttcat gatgtgacca tgcacgcaga tattgagaca gatgaagtgt acgcccagat 1140
gacactgcaa cctcttagtc tgcaaggaca aaaggacatc tattttccag cagagatggg 1200
catgcacaac aagcagccaa caaattactt ctgcaagata cttacagcaa gtgacacaag 1260
cacgcatgga gggttttcag tacctcggcg ggcagctgaa aaagtttttc ctcctctgga 1320
cttctccctg caacctccag cccaagagct aattgctcga gatcttcatg acaatgaatg 1380
gaagtttaga cacatatttc gtggacaacc caagaggcat ctgttgacaa ctggatggag 1440
tgtgtttgtt agtgcaaaac ggcttgttgc tggtgatgct gtcctgttta tatggaatga 1500
aaaaaaccag ttacttctgg gcattcggcg agctaaccgg cctcaagcgg tgatgccttc 1560
atctgtcatc tctagtgaca gcatgcattt gggccttctt gctgcagcag ctcatgcagc 1620
agcgacaaat agccgcttta ctatctttta caaccctagg gcttgcccat ctgagtttgt 1680
tatacctctt gccaagtata taaaagcggt ccatcatact cgaatatctg ttgggatgcg 1740
cttccgaatg ttatttgaga cagaagaatc aagtgttcgt cgatatatgg gcacaatcac 1800
tggtataagc gactatgatc cagtcaaatg gccaaattcg cactggcgat cagtgaaggt 1860
cggttgggat gagtctactg ctggggaaag acagccaaga gtgtccttat gggagattga 1920
accattgaca acatttccaa tatatccatc tccatttacc attggactga aacggccatg 1980
gccatcaggc attcgggatg atgatcttac catgaaccga catccgtggc tccacggaga 2040
cggtgcagat cgtatgatgc aatcgttgaa ctttcaggga atgggggtat caccttggat 2100
gcaaccaagg tttgatcttt ctgtactcgg tcagcgtact gacatgtacc aagctatagc 2160
ttctgctgct cttcagagta tgagggttat ggatccttct atgcctacca gatcccctct 2220
tctgcagctc cctcaatccc agattacccc tggacctact tttatgcagc ctcagtcact 2280
tcagcagtct gatgctcatc aagccttctt tcaaggtgct caagggagca tgccgcagct 2340
tcaatcacag gctctgtctc agcctcacgt ggaccttcta cagcaacagt tgcagcattc 2400
acagatgtca ttaagcagta agctgcagca gccacaacta cagcatcctc aacagcaaat 2460
ggtgaattcc caaagactgg cagagcttgt ttcaacagtg cctcaattta ctactgctgc 2520
tcaatcccca gcaccatcgt tgcaaacagt tccttctttg ccacatcagc aaagttttct 2580
agattatagc acaaatgctg cctccagcac tgttttttct tcagggcatt ctgttatagc 2640
ctcacttcct caggctgaaa catccaatat gctagacatg gttggtacag actcctttgt 2700
atcatctgcg gcttgtcagc agaaacaggc tgacacactg cctctgattg aacagtcttc 2760
cgagacacat tatcagaata ttgtttcctt accacctttt ccagggaaag aatgctcagt 2820
tggtgaagat ggaagtacag tgccgcaaag ccatgtctta ttcaggggca gtgttgattc 2880
atcgtccatc atggtacaca atggcctcag ggtagttggc actcatggcg aatcttcaga 2940
cattcctttc tcaatttcca acttccctgg tccaggggct gattatggac cgaatccagc 3000
tactacatct tccagttttg tcgatgaagc acctgtcata catacttcag ataatctggg 3060
gcaagaaaat ccacctacaa ctaatagcac atatgttaag gtccataaat tagggtcatg 3120
tgggaggttg ctagatatca caaagttcag cagctacatg gagctgcgtc gtgagcttgc 3180
tcgtttattt ggtcttgaag gccagttaga atcccggaga tcaggctggc agcttgtata 3240
tgttgacaag gagaatgatg ttctcctcct aggggatgac ccttggactg ggtttgtaaa 3300
tagtgtctcg tgcataaaga tactctcgcc tctagaagtg cagcagatgg atagacttgg 3360
tctggagctt ctaaactcgg ctcctagctc gacactttca aatggcacct atgaagatta 3420
ttcaagtcga caggatccac cgagtgctag aattgcatgt ctggattcac ttgagtttta 3480
gattattgta acggattcgc atttcttccg ttcgtgggag attagaacct ggtcaaaatc 3540
tcagtgaggt ctagctagtt ctaccgaagg caattctatt ttctgtattt gatgaaaata 3600
cttagttttt gaaatttcta cgacatataa aaatcgcaaa acttctagta tgtgatgatt 3660
cttgtatctt cttccctaaa aaaaaaaaaa aaaaaaaaaa aaaa 3704
<210> 2
<211> 876
<212> PRT
<213> Tamarix chinensis Lour
<400> 2
Met Lys Leu Ser Ser Ala Gly Phe Ser Pro Gln Pro Gln Glu Gly Val
1 5 10 15
Lys Lys Cys Leu Asn Ser Glu Leu Trp His Ala Cys Ala Gly Pro Leu
20 25 30
Val Ser Leu Pro Ala Val Gly Ser His Val Val Tyr Phe Pro Gln Gly
35 40 45
His Ser Glu Gln Val Ala Ala Ser Thr Asn Arg Glu Val Asp Ala Gln
50 55 60
Thr Pro Asn Tyr Pro Thr Leu Leu Pro Gln Leu Ile Cys Gln Leu His
65 70 75 80
Asp Val Thr Met His Ala Asp Ile Glu Thr Asp Glu Val Tyr Ala Gln
85 90 95
Met Thr Leu Gln Pro Leu Ser Leu Gln Gly Gln Lys Asp Ile Tyr Phe
100 105 110
Pro Ala Glu Met Gly Met His Asn Lys Gln Pro Thr Asn Tyr Phe Cys
115 120 125
Lys Ile Leu Thr Ala Ser Asp Thr Ser Thr His Gly Gly Phe Ser Val
130 135 140
Pro Arg Arg Ala Ala Glu Lys Val Phe Pro Pro Leu Asp Phe Ser Leu
145 150 155 160
Gln Pro Pro Ala Gln Glu Leu Ile Ala Arg Asp Leu His Asp Asn Glu
165 170 175
Trp Lys Phe Arg His Ile Phe Arg Gly Gln Pro Lys Arg His Leu Leu
180 185 190
Thr Thr Gly Trp Ser Val Phe Val Ser Ala Lys Arg Leu Val Ala Gly
195 200 205
Asp Ala Val Leu Phe Ile Trp Asn Glu Lys Asn Gln Leu Leu Leu Gly
210 215 220
Ile Arg Arg Ala Asn Arg Pro Gln Ala Val Met Pro Ser Ser Val Ile
225 230 235 240
Ser Ser Asp Ser Met His Leu Gly Leu Leu Ala Ala Ala Ala His Ala
245 250 255
Ala Ala Thr Asn Ser Arg Phe Thr Ile Phe Tyr Asn Pro Arg Ala Cys
260 265 270
Pro Ser Glu Phe Val Ile Pro Leu Ala Lys Tyr Ile Lys Ala Val His
275 280 285
His Thr Arg Ile Ser Val Gly Met Arg Phe Arg Met Leu Phe Glu Thr
290 295 300
Glu Glu Ser Ser Val Arg Arg Tyr Met Gly Thr Ile Thr Gly Ile Ser
305 310 315 320
Asp Tyr Asp Pro Val Lys Trp Pro Asn Ser His Trp Arg Ser Val Lys
325 330 335
Val Gly Trp Asp Glu Ser Thr Ala Gly Glu Arg Gln Pro Arg Val Ser
340 345 350
Leu Trp Glu Ile Glu Pro Leu Thr Thr Phe Pro Ile Tyr Pro Ser Pro
355 360 365
Phe Thr Ile Gly Leu Lys Arg Pro Trp Pro Ser Gly Ile Arg Asp Asp
370 375 380
Asp Leu Thr Met Asn Arg His Pro Trp Leu His Gly Asp Gly Ala Asp
385 390 395 400
Arg Met Met Gln Ser Leu Asn Phe Gln Gly Met Gly Val Ser Pro Trp
405 410 415
Met Gln Pro Arg Phe Asp Leu Ser Val Leu Gly Gln Arg Thr Asp Met
420 425 430
Tyr Gln Ala Ile Ala Ser Ala Ala Leu Gln Ser Met Arg Val Met Asp
435 440 445
Pro Ser Met Pro Thr Arg Ser Pro Leu Leu Gln Leu Pro Gln Ser Gln
450 455 460
Ile Thr Pro Gly Pro Thr Phe Met Gln Pro Gln Ser Leu Gln Gln Ser
465 470 475 480
Asp Ala His Gln Ala Phe Phe Gln Gly Ala Gln Gly Ser Met Pro Gln
485 490 495
Leu Gln Ser Gln Ala Leu Ser Gln Pro His Val Asp Leu Leu Gln Gln
500 505 510
Gln Leu Gln His Ser Gln Met Ser Leu Ser Ser Lys Leu Gln Gln Pro
515 520 525
Gln Leu Gln His Pro Gln Gln Gln Met Val Asn Ser Gln Arg Leu Ala
530 535 540
Glu Leu Val Ser Thr Val Pro Gln Phe Thr Thr Ala Ala Gln Ser Pro
545 550 555 560
Ala Pro Ser Leu Gln Thr Val Pro Ser Leu Pro His Gln Gln Ser Phe
565 570 575
Leu Asp Tyr Ser Thr Asn Ala Ala Ser Ser Thr Val Phe Ser Ser Gly
580 585 590
His Ser Val Ile Ala Ser Leu Pro Gln Ala Glu Thr Ser Asn Met Leu
595 600 605
Asp Met Val Gly Thr Asp Ser Phe Val Ser Ser Ala Ala Cys Gln Gln
610 615 620
Lys Gln Ala Asp Thr Leu Pro Leu Ile Glu Gln Ser Ser Glu Thr His
625 630 635 640
Tyr Gln Asn Ile Val Ser Leu Pro Pro Phe Pro Gly Lys Glu Cys Ser
645 650 655
Val Gly Glu Asp Gly Ser Thr Val Pro Gln Ser His Val Leu Phe Arg
660 665 670
Gly Ser Val Asp Ser Ser Ser Ile Met Val His Asn Gly Leu Arg Val
675 680 685
Val Gly Thr His Gly Glu Ser Ser Asp Ile Pro Phe Ser Ile Ser Asn
690 695 700
Phe Pro Gly Pro Gly Ala Asp Tyr Gly Pro Asn Pro Ala Thr Thr Ser
705 710 715 720
Ser Ser Phe Val Asp Glu Ala Pro Val Ile His Thr Ser Asp Asn Leu
725 730 735
Gly Gln Glu Asn Pro Pro Thr Thr Asn Ser Thr Tyr Val Lys Val His
740 745 750
Lys Leu Gly Ser Cys Gly Arg Leu Leu Asp Ile Thr Lys Phe Ser Ser
755 760 765
Tyr Met Glu Leu Arg Arg Glu Leu Ala Arg Leu Phe Gly Leu Glu Gly
770 775 780
Gln Leu Glu Ser Arg Arg Ser Gly Trp Gln Leu Val Tyr Val Asp Lys
785 790 795 800
Glu Asn Asp Val Leu Leu Leu Gly Asp Asp Pro Trp Thr Gly Phe Val
805 810 815
Asn Ser Val Ser Cys Ile Lys Ile Leu Ser Pro Leu Glu Val Gln Gln
820 825 830
Met Asp Arg Leu Gly Leu Glu Leu Leu Asn Ser Ala Pro Ser Ser Thr
835 840 845
Leu Ser Asn Gly Thr Tyr Glu Asp Tyr Ser Ser Arg Gln Asp Pro Pro
850 855 860
Ser Ala Arg Ile Ala Cys Leu Asp Ser Leu Glu Phe
865 870 875
<210> 3
<211> 45
<212> DNA
<213> Artificial
<220>
<223>Adaptor Primer sequences
<400> 3
ctaatacgac tcactatagg gcaagcagtg gtatcaacgc agagt 45
<210> 4
<211> 25
<212> DNA
<213> Artificial
<220>
<223>3'RACE forward primer Outer Primer
<400> 4
tacagcatcc tcaacagcaa atggt 25
<210> 5
<211> 22
<212> DNA
<213> Artificial
<220>
<223>3'RACE forward primer Inner Primer
<400> 5
tagacatggt tggtacagac tc 22
<210> 6
<211> 45
<212> DNA
<213> Artificial
<220>
<223>3'RACE reverse primer Outer Primer
<400> 6
ctaatacgac tcactatagg gcaagcagtg gtatcaacgc agagt 45
<210> 7
<211> 22
<212> DNA
<213> Artificial
<220>
<223>3'RACE reverse primer Inner Primer
<400> 7
ctaatacgac tcactatagg gc 22
<210> 8
<211> 45
<212> DNA
<213> Artificial
<220>
<223>5'RACE forward primer Outer Primer
<400> 8
ctaatacgac tcactatagg gcaagcagtg gtatcaacgc agagt 45
<210> 9
<211> 22
<212> DNA
<213> Artificial
<220>
<223>5'RACE forward primer Inner Primer
<400> 9
ctaatacgac tcactatagg gc 22
<210> 10
<211> 26
<212> DNA
<213> Artificial
<220>
<223>5'RACE reverse primer Outer Primer
<400> 10
accatcgggc tcttccagtg tagtta 26
<210> 11
<211> 22
<212> DNA
<213> Artificial
<220>
<223>5'RACE reverse primer Inner Primer
<400> 11
aatctgtctt tcggctatct cc 22
<210> 12
<211> 21
<212> DNA
<213> Artificial
<220>
<223>TcARF6 ORF forward primers
<400> 12
atgaagcttt cctcagcagg t 21
<210> 13
<211> 21
<212> DNA
<213> Artificial
<220>
<223>TcARF6 ORF reverse primers
<400> 13
ctaaaactca agtgaatcca g 21
<210> 14
<211> 20
<212> DNA
<213> Artificial
<220>
<223>TcARF6 forward primers
<400> 14
tctgggcatt cggcgagcta 20
<210> 15
<211> 20
<212> DNA
<213> Artificial
<220>
<223>TcARF6 reverse primers
<400> 15
gcggctattt gtcgctgctg 20
<210> 16
<211> 24
<212> DNA
<213> Artificial
<220>
<223>TIFY forward primers
<400> 16
tggagtaact gaaccaggga ggag 24
<210> 17
<211> 21
<212> DNA
<213> Artificial
<220>
<223>TIFY forward primers
<400> 17
ggctgtaggt gcctgaactg g 21