CN106503856A - Test design method for artificial neural network method Optimal Medium - Google Patents

Test design method for artificial neural network method Optimal Medium Download PDF

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CN106503856A
CN106503856A CN201610948640.4A CN201610948640A CN106503856A CN 106503856 A CN106503856 A CN 106503856A CN 201610948640 A CN201610948640 A CN 201610948640A CN 106503856 A CN106503856 A CN 106503856A
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artificial neural
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culture medium
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王珣
朱虎
李忠伟
孙贝贝
辛月振
夏盛瑜
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China University of Petroleum East China
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Abstract

The invention discloses a kind of test design method for artificial neural network method Optimal Medium, n different values in m influence factor in culture medium, the span of each influence factor are constituted matrix, different rows respectively takes a value and forms one group of experiment B in a matrixk,j, so as to obtain the test set β of s × n groups test, selecting t rows, and often capable one value of each taking-up in a matrix, composition has the checking set γ of t element, and verifies that set γ, in set β is tested, at least occurs once, at most occurs λ time.The present invention, so that each factor can be considered by equilibrium in culture medium, culture experiment is carried out using the method, and the experimental result for obtaining is applied to artificial neural network, each neuron in artificial neural network is covered well can, and train neuron to reflect the interactivity between culture medium each element so that in the case where experimental group number is as few as possible, to reach the training best to artificial neural network.

Description

Test design method for artificial neural network method Optimal Medium
Technical field
The present invention relates to medium optimization, and in particular to for the EXPERIMENTAL DESIGN side of artificial neural network method Optimal Medium Method.
Background technology
Culture medium is and the nutrient for constituting by a certain percentage in order to produce bacteria growing, breeding, metabolism and synthetic product Multiple factors such as matter, nitrogen source, carbon source and trace element in component all can produce impact, culture medium to the growth of Phellinus igniarius (L. ex Fr.) Quel. and metabolism Optimize the optimal proportion that culture medium is found using technological means, to reach maximum production.
In medium optimization, most representational prior art is Response surface meth od (Response Surface Methods):In the analysis of multifactor quantity process test, result of the test (dependent variable) and multiple experimental factors can be analyzed Regression relation between (independent variable), this recurrence possibly curve or bent relation of plane, thus referred to as response surface analysis.Such as agriculture Crop yield is relevant with the dose of several fertilizer, can set up the recurrence between yield and fertilising key element by regression analyses and close System, so as to try to achieve optimal fertilizer application formula, in the hope of maximum output.The maximum shortcoming of the method i.e., in the feelings that optimizing factors are excessive Under condition, it is necessary first to determined using experiment of single factor and screening test method for designing (Plackett-Burman Design) Significant factor in each factor of culture medium, so that, centered on significant factor, carry out response surface experiment.Wherein experiment of single factor Using often very big deviation is caused to testing accuracy, this is because experiment of single factor have ignored each factor in culture medium Reciprocal action, assert that these factors are that individually culture medium is worked;Screening test method for designing can only also filter out some and show The factor is write, equally ignores the reciprocal action between factor.
And the artificial neural network method Optimal Medium for newly rising at present, a kind of brand-new mould is provided for medium optimization Formula.Artificial neural network considers each factor in culture medium, then in simulative neural network neuron transmission information mode These factors are modeled.The great advantage of artificial neural network has the ability of intellectual learning, i.e., using existing examination Test result (Medium Proportion and corresponding yield) to be trained network, after carrying out certain training, artificial neural network Judge best medium proportioning and maximum production.Artificial neural network compared to Response surface meth od advantage i.e. to all cultures Axoneme is all comprehensively considered.But it is existing substantial amounts of result of the test using the premise of artificial neural network, merely It is low that mass propgation experimentation cost height, efficiency are carried out for this purpose.
As can be seen here, the reciprocal action of each factor or needs in culture medium are ignored in the method presence of current medium optimization Carry out the problem that mass propgation test causes high cost, efficiency low.
Content of the invention
The technical problem to be solved be current medium optimization method exist ignore in culture medium each because The reciprocal action of element needs to carry out the problem that mass propgation test causes high cost, efficiency low.
In order to solve above-mentioned technical problem, the technical solution adopted in the present invention there is provided a kind of for ANN The test design method of network method Optimal Medium, comprises the following steps:
First, by n different value group in m influence factor in culture medium, the span of each influence factor Into following matrix:
Then, in above-mentioned matrix, t rows, 1≤t≤m, and often capable one value of each taking-up, composition is arbitrarily selected to have t individual The checking set γ of element, and verify that set γ, in the test according to following condition design, at least occurs once, to having more Existing λ time, λ >=1, per group of test Bk,jFollowing condition should be met:
(1)In each element both from above-mentioned matrix, and be taken respectively from matrix Different rows, 1≤j1,j2,...,jm
J=1 is made, 2 ... n, then have the such test of n groups, βk={ Bk,1,Bk,2,...Bk,nRepresent this n groups test Set;K=1 is made, 2 ..., s, β={ β1, β2..., βs, so as to obtain the test of s × n groups;
(2) to each βk={ Bk,1,Bk,2,...Bk,n, k=1,2 ..., s, it is desirable toThat is Bk,j(j=1,2 ..., union n) is just It is well the element in whole matrix;
Finally, by the EXPERIMENTAL DESIGN scheme β={ β obtained according to above method1, β2..., βsTested, and will examination The training that structure is applied to artificial neural network is tested, so as to obtain the artificial neuron that can accurately embody culture medium factor and yield Network.
In such scheme, m=6, and each influence factor respectively inoculum concentration, liquid amount, temperature, pH value, yeast is dense Degree and concentration of glucose.
In such scheme, the span of inoculum concentration is 5g/L~7g/L, and liquid amount is 50ml~100ml, and temperature is 27.5 DEG C~32.5 DEG C, pH value is 6~8, and yeast concentration is 4g/L~8g/L, and concentration of glucose is 45g/L~85g/L.
In such scheme, t=2.
In such scheme, λ=3.
The present invention, overcomes dependence of the conventional experimental technique to experiment of single factor so that each factor can be equal in culture medium Weighing apparatus consideration, and the interactivity between factor is embodied, so that optimization experiment is more accurate;Culture examination is carried out using the method Test, and the experimental result for obtaining is applied to artificial neural network, each god in artificial neural network can be covered well Through unit, and neuron is trained to reflect the interactivity between culture medium each element so that in experimental group number feelings as few as possible Under condition, the training best to artificial neural network is reached.
Specific embodiment
The present invention is described in detail with reference to specific embodiment.
Test design method provided by the present invention for artificial neural network method Optimal Medium is comprised the following steps:
First, by n different value group in m influence factor in culture medium, the span of each influence factor Into following matrix:
Then, in above-mentioned matrix, select t rows, 1≤t≤m, and often capable one value of each taking-up, composition that there is t element Checking set γ, and verify that set γ, in the test according to following condition design, at least occurs once, λ at most occurs Secondary, λ >=1, per group of test Bk,jFollowing condition should be met:
(1)In each element both from above-mentioned matrix, and be taken respectively from matrix Different rows, 1≤j1,j2,...,jm
J=1 is made, 2 ... n, then have the such test of n groups, βk={ Bk,1,Bk,2,...Bk,nRepresent this n groups test Set;K=1 is made, 2 ..., s, β={ β1, β2..., βs, so as to obtain the test of s × n groups;
(2) to each βk={ Bk,1,Bk,2,...Bk,n, k=1,2 ..., s, it is desirable toThat is Bk,j(j=1,2 ..., union n) is just It is well the element in whole matrix;
Finally, by the EXPERIMENTAL DESIGN scheme β={ β obtained according to above method1, β2..., βsTested, and will examination The training that structure is applied to artificial neural network is tested, so as to obtain the artificial neuron that can accurately embody culture medium factor and yield Network.
In such scheme, m=6, and each influence factor respectively inoculum concentration, liquid amount, temperature, pH value, yeast is dense Degree and concentration of glucose.
In such scheme, the span of inoculum concentration is 5g/L~7g/L, and liquid amount is 50ml~100ml, and temperature is 27.5 DEG C~32.5 DEG C, pH value is 6~8, and yeast concentration is 4g/L~8g/L, and concentration of glucose is 45g/L~85g/L.
In such scheme, t=2.In 6 influence factors, the value of two influence factors is selected to verify collection to constitute Close, more easy to operate, also more reasonable.
In such scheme, λ=3.
The application is illustrated now by specific embodiment:
Influence factor m is 6, and is respectively:Inoculum concentration, liquid amount, temperature, pH value, yeast concentration, concentration of glucose, Each factor takes three values respectively, i.e. n=3, concrete value condition are as follows:
Inoculum concentration:5g/L,6g/L,7g/L;
Liquid amount:50ml,75ml,100ml;
Temperature:27.5℃,30℃,32.5℃;
PH value:6,7,8;
Yeast concentration:4g/L,6g/L,8g/L;
Concentration of glucose:45g/L,70g/L,85g/L;
As matrix
For above value, s=3 is made, the test of following 9 groups of parameter settings can be obtained:
β1={ a=5g/L, b=75ml, c=32.5 DEG C, d=7, e=4g/L, f=70g/L },
{ a=6g/L, b=50ml, c=30 DEG C, d=6, e=8g/L, f=45g/L },
{ a=7g/L, b=100ml, c=27.5 DEG C, d=8, e=6g/L, f=85g/L } };
β2={ a=5g/L, b=100ml, c=30 DEG C, d=8, e=6g/L, f=45g/L },
{ a=6g/L, b=75ml, c=27.5 DEG C, d=7, e=4g/L, f=85g/L },
{ a=7g/L, b=50ml, c=32.5 DEG C, d=6, e=8g/L, f=70g/L } };
β3={ a=5g/L, b=50ml, c=27.5 DEG C, d=6, e=8g/L, f=85g/L },
{ a=6g/L, b=100ml, c=32.5 DEG C, d=8, e=6g/L, f=70g/L },
{ a=7g/L, b=75ml, c=30 DEG C, d=7, e=4g/L, f=45g/L } };
In above EXPERIMENTAL DESIGN, make t=2, composition that there is the checking set γ of 2 elements, such as (a=5g/L, b= 100ml), (a=5g/L, b=50ml), (a=5g/L, b=75ml) etc., are only occurred in that once in 9 groups of tests respectively);
Such as (d=7, e=4g/L), (d=8, e=6g/L), (d=6, e=8g/L) are occurred in that in 9 groups of tests respectively 3 times), then 1≤λ≤3, therefore, not only ensure that the repetitive rate of the value of two factors is less, will not be too dependent on some Element, it is ensured that the coverage rate of each value, will not omit, meet condition;
By the training of the fermentation yield market demand carried out according to above 9 groups of EXPERIMENTAL DESIGN to ANN, so as to obtain To the artificial neural network that can accurately embody culture medium factor and yield.
The present invention, overcomes dependence of the conventional experimental technique to experiment of single factor so that each factor can be equal in culture medium Weighing apparatus consideration, and the interactivity between factor is embodied, so that optimization experiment is more accurate;Culture examination is carried out using the method Test, and the experimental result for obtaining is applied to artificial neural network, each god in artificial neural network can be covered well Through unit, and neuron is trained to reflect the interactivity between culture medium each element so that in experimental group number feelings as few as possible Under condition, the training best to artificial neural network is reached.
The present invention is not limited to above-mentioned preferred forms, and anyone should learn the knot that makes under the enlightenment of the present invention Structure change, every with of the invention with same or like technical scheme, each fall within protection scope of the present invention.

Claims (5)

1. the test design method of artificial neural network method Optimal Medium is used for, it is characterised in that comprised the following steps:
First, n different values in m influence factor in culture medium, the span of each influence factor are constituted such as Lower matrix:
Then, in above-mentioned matrix, select t rows, 1≤t≤m, and often capable one value of each taking-up, composition that there is testing for t element Card set γ, and verify that set γ, in the test according to following condition design, at least occurs once, at most occurs λ time, λ >=1, per group of test Bk,jFollowing condition should be met:
(1)In each element both from above-mentioned matrix, and be taken respectively from matrix not Colleague, 1≤j1,j2,Λ,jm
J=1 is made, 2, Κ n then have the such test of n groups, βk={ Bk,1,Bk,2,ΚBk,nRepresent the set that this n group is tested;Order K=1,2, Κ, s, β={ β1, β2, Κ, βs, so as to obtain the test of s × n groups;
(2) to each βk={ Bk,1,Bk,2,ΚBk,n, k=1,2, Κ, s, it is desirable toThat is Bk,j(j=1,2, Κ, union n) is just It is the element in whole matrix;
Finally, by the EXPERIMENTAL DESIGN scheme β={ β obtained according to above method1, β2, Κ, βsTested, and by test structure The training of artificial neural network is applied to, so as to obtain the artificial neural network that can accurately embody culture medium factor and yield.
2. the test design method of artificial neural network method Optimal Medium is used for as claimed in claim 1, it is characterised in that M=6, and each influence factor is respectively inoculum concentration, liquid amount, temperature, pH value, yeast concentration and concentration of glucose.
3. the test design method of artificial neural network method Optimal Medium is used for as claimed in claim 2, it is characterised in that The span of inoculum concentration is 5g/L~7g/L, and liquid amount is 50ml~100ml, and temperature is 27.5 DEG C~32.5 DEG C, and pH value is 6 ~8, yeast concentration is 4g/L~8g/L, and concentration of glucose is 45g/L~85g/L.
4. the test design method of artificial neural network method Optimal Medium is used for as claimed in claim 2, it is characterised in that T=2.
5. the test design method of artificial neural network method Optimal Medium is used for as claimed in claim 2, it is characterised in that λ=3.
CN201610948640.4A 2016-10-26 2016-10-26 Test design method for artificial neural network method Optimal Medium Pending CN106503856A (en)

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Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109859802A (en) * 2019-01-10 2019-06-07 中国石油大学(华东) A kind of Phellinus protein domain prediction threshold value method based on power spectrum
WO2022063341A1 (en) * 2020-09-27 2022-03-31 深圳太力生物技术有限责任公司 Basal culture medium development method, basal culture medium formulation and development, and system thereof

Citations (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN105069220A (en) * 2015-08-04 2015-11-18 莆田学院 Back-propagation (BP) neural network immune genetic algorithm based microbial fermentation optimization method
CN105373669A (en) * 2015-11-28 2016-03-02 泰山医学院 Pholiota adiposa fermentation condition optimization and dynamic model construction method

Patent Citations (2)

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Publication number Priority date Publication date Assignee Title
CN105069220A (en) * 2015-08-04 2015-11-18 莆田学院 Back-propagation (BP) neural network immune genetic algorithm based microbial fermentation optimization method
CN105373669A (en) * 2015-11-28 2016-03-02 泰山医学院 Pholiota adiposa fermentation condition optimization and dynamic model construction method

Non-Patent Citations (1)

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Title
高梦祥 等: ""基于人工神经网络的侧孢芽孢杆菌培养基的优化研究"", 《长江大学学报(自然科学版)》 *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109859802A (en) * 2019-01-10 2019-06-07 中国石油大学(华东) A kind of Phellinus protein domain prediction threshold value method based on power spectrum
WO2022063341A1 (en) * 2020-09-27 2022-03-31 深圳太力生物技术有限责任公司 Basal culture medium development method, basal culture medium formulation and development, and system thereof

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