CN106397514B - A kind of double labelling uridine-(13C,15N2) synthetic method - Google Patents
A kind of double labelling uridine-(13C,15N2) synthetic method Download PDFInfo
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- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
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Abstract
The present invention relates to a kind of double labelling uridine-(13C,15N2) synthetic method, this method using anhydrous benzene as solvent, double labelling urea-(13C,15N2) and propiolic acid be raw material carry out cyclization, obtain double labelling uracil-(13C,15N2);In Ar2Under atmosphere, acetonitrile as solvents, double labelling uracil-(13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β-D-RIBOSE mixing, are subsequently added into hexamethyldisilazane and trifluoromethane sulfonic acid trimethyl silicone grease, the intermediate obtained after post-treated is hydrolyzed with ammonium hydroxide, can be obtained double labelling uridine-(13C,15N2).Compared with prior art, present invention process is simple, and yield is higher, and isotope abundance does not decline, be suitble to Laboratory Production double labelling uridine-(13C,15N2)。
Description
Technical field
The present invention relates to the preparation method of the organic compound of stable isotope labeling more particularly to a kind of double labelling urine are phonetic
Pyridine nucleosides-(13C,15N2) methodology of organic synthesis.
Background technique
Uridine is white, needle-shaped crystals or powder, odorlessness, taste slightly sweet tea and micro-pungent, is slightly soluble in dilute alcohol, does not dissolve in
Dehydrated alcohol is the related ingredient for constituting zooblast nucleic acid.It is indispensable raw material in biomedical research, while
It is the basic element for preparing biologics.Uridine is a kind of drug, be usually used in treatment resist huge red blood cell anaemia and liver,
The diseases such as the cerebrovascular, angiocarpy, and manufacture fluorouracil (S-FC), deoxyribonucleoside, iodoxuridine (IDUR), bromine glycosides (BUDR), fluorine
The primary raw material of the drugs such as glycosides (FUDR).
In order to study uridine and its derivative drug to the organism mechanism of action, need to compound and its metabolism
Object is tracked, but since compound is in factors such as high noisy background, complicated matrix effect, preceding processing and mass detectors
Under the influence of, it is affected to analysis method measurement result.In order to avoid the inaccuracy of analysis, stable isotope mark is used
Remember compound, the error that can effectively occur in bearing calibration significantly improves the stability of detection method.Double labelling uracil
Nucleosides-(13C,15N2) can effective and accurate detection nucleoside medicine and its metabolin as isotopic label.
Currently, the method for preparing uridine has RNA chemical hydrolysis and fermentation method.Traditional uridine preparation
Method is using RNA through chemical hydrolysis, then prepare 2 kinds of pyrimidine nucleosides (Kazarinova LA, Livshits VA,
Preobrazhenskaya ES,et al.Method for producing uridine-5'-monophosphate by
fermentation using mutantstrains of coryneform bacteria [P].United States
Patent:6344344,2002-02-05), this method not only needs a large amount of high quality rna raw material, but also is not suitable for preparing same position
Element label uridine;Fermentation method (progress [J] biotechnology communications of Wang Rui pyrimidine nucleoside, 2007,18 (3):
539~541.) be by means of microorganism have synthesize itself needed for nucleosides ability, at the mutagenesis to specified microorganisms
Reason, selects auxotroph and nucleoside analog resistant mutant strain, to release the feedback inhibition in Metabolism regulation and feedback resistance
Hold back, to achieve the purpose that accumulate pyrimidine nucleoside during the fermentation, addition precursor fermentation method is closed using nucleotide biology
Pyrimidine bases are made to pass through benefit by adding precursor uracil in the culture medium that nucleosides produces bacterium at the remedial pathway of approach
The direct synthetic nucleosides of approach are rescued, to increase the production quantity of uridine.Fermentation method is with fermentation condition is simple, the period is short and yield is high
The advantages that, but it is more difficult to select useful strain, and isotope abundance is easy to be diluted.
Summary of the invention
It is simple, feasible that it is an object of the present invention to overcome the above-mentioned drawbacks of the prior art and provide a kind of methods
And double labelling uridine-suitable for mass production (13C,15N2) synthetic method.
The purpose of the present invention can be achieved through the following technical solutions: a kind of double labelling uridine-(13C,15N2)
Synthetic method, which is characterized in that this method using anhydrous benzene as solvent, double labelling urea-(13C,15N2) and propiolic acid be raw material
Carry out cyclization, obtain double labelling uracil-(13C,15N2);In Ar2Under atmosphere, acetonitrile as solvents, double labelling uracil-
(13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β-D-RIBOSE mixing is subsequently added into two silicon nitrogen of hexamethyl
Alkane and trifluoromethane sulfonic acid trimethyl silicone grease, the intermediate obtained after post-treated are hydrolyzed with ammonium hydroxide, and double labelling urine can be obtained
Pyrimidine nucleoside-(13C,15N2)。
The method have the following steps are included:
(1) using anhydrous benzene as solvent, double labelling urea-(13C,15N2) and propiolic acid be added in solvent, 20~150 DEG C are anti-
It answers 10~40 hours, is separated water into during the reaction with water segregator, obtained dark red solution is added in ice water, immediately
There is the crystal of uracil to be precipitated, stands overnight, gained crystallization double labelling uracil-(13C,15N2) filtering, vacuum drying;
(2) in Ar2Under atmosphere, by double labelling uracil-(13C,15N2) and 1- acetoxyl group -2,3,5- tri-benzoyl oxygen
Base-β-D-RIBOSE is added in solvent, is stirred at room temperature, and is then placed in cooling in ice bath, is successively added with glass syringe
Hexamethyldisilazane and trifluoromethane sulfonic acid trimethyl silicone grease, solution is clarified after stirring, after 0~5 DEG C is stirred 10~50 minutes
It is stirred overnight at room temperature;
(3) reaction solution is spin-dried for solvent, residue after purification, with saturation Na2CO3It washes, organic phase anhydrous Na2SO4It is dry
Dry overnight, filtering obtains intermediate after being spin-dried for solvent;
(4) intermediate is dissolved in methanol, ammonium hydroxide is added, solution is stirred 12~48 hours and is hydrolyzed at room temperature, is spin-dried for
Crude product CH afterwards3OH-CH2Cl2Silica gel column purification is crossed as eluent, obtaining colorless solid is target product double labelling uridine diphosphate
Glycosides-(13C,15N2)。
Reaction route is as follows:
Double labelling urea-described in step (1) (13C,15N2) and propiolic acid reaction molar ratio be 1:1~2.
Double labelling urea-described in step (1) (13C,15N2) and propiolic acid reaction molar ratio be 1:1.2~1.5, reaction
Temperature is 80 DEG C and reacts 20 hours.
The temperature stood overnight described in step (1) is 0~5 DEG C, preferably 4 DEG C.
Double labelling uracil-described in step (2) (13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β -
The molar ratio of D-RIBOSE reaction is 1:1~2;The solvent is one of acetonitrile, methylene chloride, chloroform or more
Kind;Be added hexamethyldisilazane mole be uracil-(13C,15N2) 2~6 times;Trifluoromethane sulfonic acid trimethyl is added
The mole of silicone grease is uracil -- (13C,15N2) 0.5~3 times;
Double labelling uracil-described in step (2) (13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β -
The molar ratio of D-RIBOSE reaction is 1:1.2~1.5;The solvent is acetonitrile;Mole of hexamethyldisilazane is added
Amount be uracil-(13C,15N2) 3 times;The mole that trifluoromethane sulfonic acid trimethyl silicone grease is added is uracil -- (13C,15N2) 2 times.
Purifying described in step (3) is that residue is dissolved in solvent, and the solvent used is ethyl acetate, chloroform, second
One of ether is a variety of.
Ammonium hydroxide solubility described in step (4) is 5%~20%, and ammonium hydroxide hydrolysis time is 20 hours.
Compared with prior art, in order to effectively and accurately detect the metabolic pathway of pyridimine nucleosides drug, this
Invention is used using anhydrous benzene as solvent, double labelling urea-(13C,15N2) and propiolic acid be that raw material carries out cyclization, crude product is through de-
Color and recrystallization after obtain double labelling uracil-(13C,15N2).In Ar2Under atmosphere, acetonitrile as solvents, double labelling uracil-
(13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β-D-RIBOSE be stirred, then use glass syringe
Hexamethyldisilazane and trifluoromethane sulfonic acid trimethyl silicone grease is added.The intermediate obtained after post-treated is hydrolyzed with ammonium hydroxide,
Can be obtained double labelling uridine-(13C,15N2).Yield >=72% (with double labelling urea-(13C,15N2) meter),13C and15N
Abundance is both greater than 98% (being measured with the liquid chromatograph-mass spectrometer and MAT271 isotope mass spectrometer of Thermo), and chemistry is pure
Degree is greater than 99% (the Mahna-IR550 determination of infrared spectroscopy of Waters liquid chromatogram and Nicole company).The method label13C,15N2Isotope simple process, yield is higher, and isotope abundance does not decline, and is suitble to Laboratory Production double labelling uridine diphosphate
Glycosides-(13C,15N2)。
Specific embodiment
It elaborates below to the embodiment of the present invention, the present embodiment carries out under the premise of the technical scheme of the present invention
Implement, the detailed implementation method and specific operation process are given, but protection scope of the present invention is not limited to following implementation
Example.
Embodiment 1
Take double labelling urea-(13C,15N2) 10mmol and propiolic acid 15mmol be added in the solution that anhydrous benzene is solvent,
80 DEG C are reacted 40 hours, are separated water into during the reaction with water segregator, obtained dark red solution is added in ice water, are stood
There is the crystal of uracil to be precipitated, 4 DEG C stand overnight.Crystallization double labelling uracil-(13C,15N2) filtering, it is dried in vacuo, obtains
1.01g product (1).
In Ar2Under atmosphere, using acetonitrile as solvent, by 10mmol uracil-(13C,15N2) and 20mmol 1- acetoxyl group-
2,3,5- thribenzoyl-β-D-RIBOSE is added in solution, is stirred at room temperature, and is then placed in cooling in ice bath, uses glass
60mmol hexamethyldisilazane and 5mmol trifluoromethane sulfonic acid trimethyl silicone grease, solution after stirring is successively added in glass syringe
Clarification, 0 DEG C stirring 30 minutes after be stirred overnight at room temperature.
Reaction solution is spin-dried for solvent, residue is dissolved in ethyl acetate, with saturation Na2CO3It is washed till pH neutrality, is saturated NaCl
Organic phase 3 times are washed, organic phase anhydrous Na2SO4It is dried overnight.Filtering obtains intermediate (2) after being spin-dried for solvent.
Intermediate (2) is dissolved in methanol, 10% ammonium hydroxide is added, solution ammonia hydrolyzes 20 hours at room temperature, thick after being spin-dried for
Product CH3OH-CH2Cl2Silica gel column purification is crossed as eluent, product is obtained and is washed with n-hexane, colorless solid is obtained after vacuum drying is
For target product double labelling uridine-(13C,15N2), total recovery be 72.5% (with double labelling urea-(13C,15N2) meter)
,13C >=98%,15N >=98%, chemical purity >=99%.
Embodiment 2
Take double labelling urea-(13C,15N2) 10mmol and propiolic acid 10mmol be added in the solution that anhydrous benzene is solvent,
20 DEG C are reacted 20 hours, are separated water into during the reaction with water segregator, obtained dark red solution is added in ice water, are stood
There is the crystal of uracil to be precipitated, 4 DEG C stand overnight.Crystallization double labelling uracil-(13C,15N2) filtering, it is dried in vacuo, obtains
0.86g product (1).
In Ar2Under atmosphere, using acetonitrile as solvent, by 10mmol uracil-(13C,15N2) and 13mmol 1- acetoxyl group-
2,3,5- thribenzoyl-β-D-RIBOSE is added in solution, is stirred at room temperature, and is then placed in cooling in ice bath, uses glass
30mmol hexamethyldisilazane and 10mmol trifluoromethane sulfonic acid trimethyl silicone grease, solution after stirring is successively added in glass syringe
Clarification, 0 DEG C stirring 30 minutes after be stirred overnight at room temperature.
Reaction solution is spin-dried for solvent, residue is dissolved in ethyl acetate, with saturation Na2CO3It is washed till pH neutrality, is saturated NaCl
Organic phase 3 times are washed, organic phase anhydrous Na2SO4It is dried overnight.Filtering obtains intermediate (2) after being spin-dried for solvent.
Intermediate (2) is dissolved in methanol, 20% ammonium hydroxide is added, solution ammonia hydrolyzes 12 hours at room temperature, thick after being spin-dried for
Product CH3OH-CH2Cl2Silica gel column purification is crossed as eluent, product is obtained and is washed with n-hexane, colorless solid is obtained after vacuum drying is
For target product double labelling uridine-(13C,15N2), total recovery be 73.0% (with double labelling urea-(13C,15N2) meter)
,13C >=98%,15N >=98%, chemical purity >=99%.
Embodiment 3
Take double labelling urea-(13C,15N2) 10mmol and propiolic acid 20mmol be added in the solution that anhydrous benzene is solvent,
150 DEG C are reacted 10 hours, are separated water into during the reaction with water segregator, obtained dark red solution is added in ice water,
There is the crystal of uracil to be precipitated immediately, 4 DEG C stand overnight.Crystallization double labelling uracil-(13C,15N2) filtering, it is dried in vacuo, obtains
To 1.00g product (1).
In Ar2Under atmosphere, using acetonitrile as solvent, by 10mmol uracil-(13C,15N2) and 10mmol 1- acetoxyl group-
2,3,5- thribenzoyl-β-D-RIBOSE is added in solution, is stirred at room temperature, and is then placed in cooling in ice bath, uses glass
20mmol hexamethyldisilazane and 30mmol trifluoromethane sulfonic acid trimethyl silicone grease, solution after stirring is successively added in glass syringe
Clarification, 0 DEG C stirring 30 minutes after be stirred overnight at room temperature.
Reaction solution is spin-dried for solvent, residue is dissolved in ethyl acetate, with saturation Na2CO3It is washed till pH neutrality, is saturated NaCl
Organic phase 3 times are washed, organic phase anhydrous Na2SO4It is dried overnight.Filtering obtains intermediate (2) after being spin-dried for solvent.
Intermediate (2) is dissolved in methanol, 5% ammonium hydroxide is added, solution ammonia hydrolyzes 48 hours at room temperature, is spin-dried for rear crude product
Use CH3OH-CH2Cl2Silica gel column purification is crossed as eluent, product is obtained and is washed with n-hexane, colorless solid is obtained after vacuum drying is
Target product double labelling uridine-(13C,15N2), total recovery be 73.5% (with double labelling urea-(13C,15N2) meter),13C
>=98%,15N >=98%, chemical purity >=99%.
Embodiment 4
Take double labelling urea-(13C,15N2) 10mmol and propiolic acid 12mmol be added in the solution that anhydrous benzene is solvent,
100 DEG C are reacted 20 hours, are separated water into during the reaction with water segregator, obtained dark red solution is added in ice water,
There is the crystal of uracil to be precipitated immediately, 0 DEG C stands overnight.Crystallization double labelling uracil-(13C,15N2) filtering, it is dried in vacuo, obtains
To 1.00g product (1).
In Ar2Under atmosphere, using methylene chloride as solvent, by 10mmol uracil-(13C,15N2) and 12mmol 1- acetyl
Oxygroup -2,3,5- thribenzoyl-β-D-RIBOSE are added in solution, are stirred at room temperature, and are then placed in cooling in ice bath,
30mmol hexamethyldisilazane and 20mmol trifluoromethane sulfonic acid trimethyl silicone grease are successively added with glass syringe, after stirring
Solution clarification, 5 DEG C of stirrings are stirred overnight at room temperature after ten minutes.
Reaction solution is spin-dried for solvent, residue is dissolved in chloroform, with saturation Na2CO3It is washed till pH neutrality, saturation NaCl has been washed
Machine phase 3 times, organic phase anhydrous Na2SO4It is dried overnight.Filtering obtains intermediate (2) after being spin-dried for solvent.
Intermediate (2) is dissolved in methanol, 10% ammonium hydroxide is added, solution ammonia hydrolyzes 24 hours at room temperature, thick after being spin-dried for
Product CH3OH-CH2Cl2Silica gel column purification is crossed as eluent, product is obtained and is washed with n-hexane, colorless solid is obtained after vacuum drying is
For target product double labelling uridine-(13C,15N2), total recovery be 73.8% (with double labelling urea-(13C,15N2) meter)
,13C >=98%,15N >=98%, chemical purity >=99%.
Embodiment 5
Take double labelling urea-(13C,15N2) 10mmol and propiolic acid 16mmol be added in the solution that anhydrous benzene is solvent,
110 DEG C are reacted 30 hours, are separated water into during the reaction with water segregator, obtained dark red solution is added in ice water,
There is the crystal of uracil to be precipitated immediately, 10 DEG C stand overnight.Crystallization double labelling uracil-(13C,15N2) filtering, vacuum drying,
Obtain 1.00g product (1).
In Ar2Under atmosphere, using chloroform as solvent, by 10mmol uracil-(13C,15N2) and 15mmol 1- acetoxyl group-
2,3,5- thribenzoyl-β-D-RIBOSE is added in solution, is stirred at room temperature, and is then placed in cooling in ice bath, uses glass
30mmol hexamethyldisilazane and 20mmol trifluoromethane sulfonic acid trimethyl silicone grease, solution after stirring is successively added in glass syringe
Clarification, 0 DEG C stirring 30 minutes after be stirred overnight at room temperature.
Reaction solution is spin-dried for solvent, residue is dissolved in chloroform, with saturation Na2CO3It is washed till pH neutrality, saturation NaCl has been washed
Machine phase 3 times, organic phase anhydrous Na2SO4It is dried overnight.Filtering obtains intermediate (2) after being spin-dried for solvent.
Intermediate (2) is dissolved in methanol, 15% ammonium hydroxide is added, solution ammonia hydrolyzes 36 hours at room temperature, thick after being spin-dried for
Product CH3OH-CH2Cl2Silica gel column purification is crossed as eluent, product is obtained and is washed with n-hexane, colorless solid is obtained after vacuum drying is
For target product double labelling uridine-(13C,15N2), total recovery be 74% (with double labelling urea-(13C,15N2) meter),13C
>=98%,15N >=98%, chemical purity >=99%.
Claims (8)
1. a kind of double labelling uridine-(13C,15N2) synthetic method, which is characterized in that this method with anhydrous benzene be it is molten
Agent, double labelling urea-(13C,15N2) and propiolic acid be raw material carry out cyclization, obtain double labelling uracil-(13C,15N2);
In Ar2Under atmosphere, acetonitrile as solvents, double labelling uracil-(13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl -
β-D-RIBOSE mixing is subsequently added into hexamethyldisilazane and trifluoromethane sulfonic acid trimethyl silicone grease, obtains after post-treated
To intermediate hydrolyzed with ammonium hydroxide, can be obtained double labelling uridine-(13C,15N2);
The method have the following steps are included:
(1) using anhydrous benzene as solvent, double labelling urea-(13C,15N2) and propiolic acid be added in solvent, 20~150 DEG C reaction 10
It~40 hours, is separated water into during the reaction with water segregator, obtained dark red solution is added in ice water, there is urine immediately
The crystal of pyrimidine is precipitated, and stands overnight, gained crystallization double labelling uracil-(13C,15N2) filtering, vacuum drying;
(2) in Ar2Under atmosphere, by double labelling uracil-(13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β -
D-RIBOSE is added in solvent, is stirred at room temperature, and is then placed in cooling in ice bath, hexamethyl is successively added with glass syringe
Disilazane and trifluoromethane sulfonic acid trimethyl silicone grease, after stirring solution clarify, 0~5 DEG C stirring 10~50 minutes after room temperature stir
It mixes overnight;
(3) reaction solution is spin-dried for solvent, after residue is dissolved in solvent purification, with saturation Na2CO3It washes, organic phase is with anhydrous
Na2SO4It is dried overnight, filters, obtain intermediate after being spin-dried for solvent;
(4) intermediate is dissolved in methanol, ammonium hydroxide is added, solution is stirred 12~48 hours and is hydrolyzed at room temperature, thick after being spin-dried for
Product CH3OH-CH2Cl2Silica gel column purification is crossed as eluent, obtaining colorless solid is target product double labelling uridine-
(13C,15N2)。
2. double labelling uridine-according to claim 1 (13C,15N2) synthetic method, which is characterized in that step
(1) described in double labelling urea-(13C,15N2) and propiolic acid reaction molar ratio be 1:1~2.
3. double labelling uridine-according to claim 1 or 2 (13C,15N2) synthetic method, which is characterized in that step
Suddenly double labelling urea-described in (1) (13C,15N2) and propiolic acid reaction molar ratio be 1:1.2~1.5, reaction temperature be 80 DEG C
Reaction 20 hours.
4. double labelling uridine-according to claim 1 (13C,15N2) synthetic method, which is characterized in that step
(1) temperature stood overnight described in is 0~10 DEG C.
5. double labelling uridine-according to claim 1 (13C,15N2) synthetic method, which is characterized in that step
(2) described in double labelling uracil-(13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β-D-RIBOSE it is anti-
The molar ratio answered is 1:1~2;The solvent is one or more of acetonitrile, methylene chloride, chloroform;Hexamethyl is added
The mole of disilazane be uracil-(13C,15N2) 2~6 times;The mole of trifluoromethane sulfonic acid trimethyl silicone grease is added
For uracil-(13C,15N2) 0.5~3 times.
6. according to claim 1 or 5 double labelling uridine-(13C,15N2) synthetic method, which is characterized in that step
Suddenly double labelling uracil-described in (2) (13C,15N2) and 1- acetoxyl group -2,3,5- thribenzoyl-β-D-RIBOSE
The molar ratio of reaction is 1:1.2~1.5;The solvent is acetonitrile;The mole that hexamethyldisilazane is added is uracil-
(13C,15N2) 3 times;Be added trifluoromethane sulfonic acid trimethyl silicone grease mole be uracil-(13C,15N2) 2 times.
7. double labelling uridine-according to claim 1 (13C,15N2) synthetic method, which is characterized in that step
(3) purifying described in is that residue is dissolved in solvent, the solvent used for one of ethyl acetate, chloroform, ether or
It is a variety of.
8. double labelling uridine-according to claim 1 (13C,15N2) synthetic method, which is characterized in that step
(4) the ammonium hydroxide solubility described in is 5%~20%, and ammonium hydroxide hydrolysis time is 20 hours.
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Non-Patent Citations (4)
Title |
---|
《Preparation of Uracil》;Ralph J. De Pasquale;《J.Org.Chem》;19771231;第42卷(第12期);2185-2187 |
《SYNTHESIS OF ISOTOPICALLY LABELLED DNA DEGRADATION PRODUCTS FOR USE IN MASS SPECTROMETRIC STUDIES OF CELLULAR DNA DAMAGE》;SAIC Frederick;《Journal of labelled compounds and radiopharmaceuticals》;19960831;第XXXVIII卷(第8期);713-723 |
《The economical synthesis of 【2-13C,1,3-15N2】uridine;preliminary conformational studies by solid state NMR》;Simon G.Patching;《Org. Biomol.Chem.》;20031231(第1期);2058,2061-2062 |
《同位素标记胞嘧啶的合成研究》;徐建飞;《化学试剂》;20160630;572 |
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