CN106204587B - Multiple organ dividing method based on depth convolutional neural networks and region-competitive model - Google Patents

Multiple organ dividing method based on depth convolutional neural networks and region-competitive model Download PDF

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CN106204587B
CN106204587B CN201610539736.5A CN201610539736A CN106204587B CN 106204587 B CN106204587 B CN 106204587B CN 201610539736 A CN201610539736 A CN 201610539736A CN 106204587 B CN106204587 B CN 106204587B
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kidney
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CN106204587A (en
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孔德兴
胡佩君
吴法
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Zhejiang Deshang Yunxing Medical Technology Co., Ltd.
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ZHEJIANG DESHANG YUNXING IMAGE SCIENCE & TECHNOLOGY Co Ltd
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    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/10Image acquisition modality
    • G06T2207/10072Tomographic images
    • G06T2207/10081Computed x-ray tomography [CT]
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/20Special algorithmic details
    • G06T2207/20081Training; Learning
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/20Special algorithmic details
    • G06T2207/20084Artificial neural networks [ANN]
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/30Subject of image; Context of image processing
    • G06T2207/30004Biomedical image processing
    • G06T2207/30056Liver; Hepatic

Abstract

The present invention relates to Medical Image Processings, it is desirable to provide the multiple organ dividing method based on depth convolutional neural networks and region-competitive model.The multiple organ dividing method based on depth convolutional neural networks and region-competitive model includes process: training Three dimensional convolution neural network;Using in trained Three dimensional convolution neural network learning CTA volume data liver, spleen, kidney and background prior probability image;The initial segmentation region of each tissue is determined by the prior probability image of various organization;Determine that each pixel is belonging respectively to four kinds of probability organized in image;Establish the multi_region model based on region-competitive;With convex optimization method solving model;It is post-processed, obtains the profile of each organ.The present invention quickly detects the position of abdomen liver, spleen and kidney using convolutional neural networks automatically, obtains the prior probability image of each organ, recycles region-competitive model, can accurately be partitioned into the profile of liver, spleen and kidney simultaneously.

Description

Multiple organ dividing method based on depth convolutional neural networks and region-competitive model
Technical field
The present invention relates to field of medical image processing, in particular to are based on depth convolutional neural networks and region-competitive mould The multiple organ dividing method of type.
Background technique
The segmentation of abdomen organ has important research significance and clinical value.Clinically, doctor is usually by means of CT machine, That is computed tomography scanner, to obtain a series of plane gray scale faultage images of human abdomen, and by continuously checking this A little images are come size, position, the correlation etc. of sentencing each organ.Fast automaticly coming out organ segmentation from CT image is Carry out the visual first step.Than visualization importantly, determine organ of interest position and region in radiotherapy operation by Important meaning.Only according to the spatial geometric shape of organ and volume, accurate Radiation treatment plans and radiotherapeutic agents can be just made Amount.
Traditional abdominal organ segmentation method can be divided into the method based on image and the method based on model.Based on image Method include threshold segmentation method, region growing method, deformation model etc..These methods generally require artificial initialization or Interaction, and be easy to be influenced by gray value, there is a situation where less divided or over-segmentation occurs.In method based on model, allusion quotation Type algorithm has probability atlas calculation and statistical shape model.But these two types of algorithms are influenced big, algorithm by prior shape initialization Process is complicated, and prior shape is difficult to portray the organ shape of Different Individual.On the one hand due to the shape of abdomen organ, position and Size difference in different crowd is huge, on the other hand due to the presence of different tissues organ adhesion and pathological tissues, so that device Edge blurry, the contrast of official is low, is difficult to detect.These problems all bring challenge to existing abdominal organ segmentation method. Have in newest algorithm through convolutional neural networks and detect the multiple organs of abdomen, but does not obtain accurate segmentation result.
It is therefore proposed that one kind can detect abdominal multivisceral organ position automatically, and being capable of each organ of quick Accurate Segmentation Algorithm it is clinically very necessary and need.
Summary of the invention
It is a primary object of the present invention to overcome deficiency in the prior art, a kind of automatic detection multiple organs of abdomen are provided Position, and be able to solve the joint dividing method of multiple organ in the medical image of speed and precision problem.It is above-mentioned to solve Technical problem, solution of the invention is:
The multiple organ dividing method based on depth convolutional neural networks and region-competitive model is provided, for abdominal CT A (Computed Tomography Angiography, CT angiography) three-dimensional data, i.e. computed tomography blood vessel Liver, spleen, left kidney, right kidney in contrastographic picture carry out while dividing, described competing based on depth convolutional neural networks and region The multiple organ dividing method for striving model includes following processes:
One, training Three dimensional convolution neural network;
Two, liver, spleen, kidney and the background in trained Three dimensional convolution neural network learning CTA volume data are utilized Prior probability image;
Three, the initial segmentation region of each tissue is determined by the prior probability image of various organization;
Four, determine that each pixel is belonging respectively to four kinds of probability organized in image;
Five, the multi_region model based on region-competitive is established;
Six, with convex optimization method solving model;
Seven, it is post-processed, obtains the profile of each organ;
The process one specifically include the following steps:
Step A: prepare training set: collecting size and be the abdomen Hepatic CT A volume data of 512 × 512 × n, and make these The Standard Segmentation of the livers of data, spleen and kidney is as a result, wherein n is the number of plies of volume data;
Step B: designing the structure of convolutional neural networks, and input picture block size is 496 × 496 × 279, and output image is The image block that four sizes are 496 × 496 × 256, respectively corresponds each pixel and belongs to background, liver, spleen and kidney Probability value;
Step C: using the various parameters in training set training convolutional neural networks, by training set ready in step A It is put into designed convolutional neural networks in step B to be trained, obtains the various parameters in convolutional neural networks, trained At;
The process two specifically refers to:
If the image for needing to carry out organ segmentation is three-dimensional data I (x), image definition domain isPixel is x= (x1, x2, x3);
By in the trained convolutional neural networks of image input process one to be tested, make each pixel quilt of image I (x) The probability value for belonging to four kinds of tissues is assigned, it is respectively L that note, which belongs to the probability value of background, liver, spleen and kidney,0(x), L1(x), L2(x) and L3(x), the size of x ∈ Ω, this four probability graphs are identical as original image size;
Wherein, symbolExpression is contained in, and symbol ∈ expression belongs to set;
The process three specifically refers to:
Respectively to probability graph Li(x), i=0,1,2,3 each pixel point value takes threshold value 0.5, greater than the pixel of threshold value Belong to the histioid prime area Si, i=0,1,2,3;
The process four specifically refers to:
To the every bit pixel x in the original image I (x) of input, for the original area of background, liver, spleen and kidney Domain Si, i=0,1,2,3, count the grey level histogram H in each regioni, i=0,1,2,3;Then according to the gray scale of pixel x Value, by this gray value in grey level histogram HiIn shared ratio belong to the probability of i class as this pixel, be denoted as pi (x);
The process five specifically include the following steps:
Step D: the label function for defining background, liver, spleen and kidney is respectively as follows:
For x ∈ Ω and satisfaction
ui(x) value is equal to 1 expression pixel x and belongs to the i-th class loading;
Wherein, symbol :=indicate to be defined as;Ω indicates image-region;Region Ωi, i=0,1,2,3 respectively represent background, Liver, spleen and kidney region;Symbol ∪ indicates union of sets;∑ is summation symbol;
Step E: to original image I (x), it is as follows to calculate frontier probe function g (x):
Wherein, β is positive number (value 0.2), and symbol :=expression is defined as;SymbolIndicate gradient operator;Symbol | | Indicate L2 norm;
Step F: the region-competitive model based on prior probability image and regional statistical information is established:
And calculate Ci(x) :=[α1(-log pi(x))+α2(-log Li(x))] g (x), i=0,1,2,3;
Wherein, g (x) is the frontier probe function that step E is defined;Symbol :=indicate to be defined as;Ω indicates image-region; ∫ΩIndicate the integral in the Ω of region;Dx indicates domain integral member;∑ is summation symbol;pi(x) pixel calculated for process four Point x belongs to the probability of class i;Li(x) the pixel x to be obtained by process two belongs to the prior probability of class i;Log is indicated with 10 Seek logarithm in bottom;Symbol | | indicate L1Norm;α1, α2For normal number, for adjusting every weight, value section [20, 50] in;Indicate gradient operator;The λ refers to regularization parameter, and for adjusting every weight, value is between [0,20];
(C in the first item of above-mentioned energy functional (1)i(x) it is the item based on region, utilizes the prime area of each tissue Grey-level statistics pi(x) and prior probability image Li(x), it estimates each pixel x and belongs to the i-th histioid cost function Ci (x);Section 2 is the item based on boundary, can capture boundary information well, guarantees the slickness of liver profile being partitioned into; Area item and border item pass through a frontier probe function g (x) and weight α1, α2, λ adaptive adjusting specific gravity, so that close The place on boundary, model depend on boundary information, the smooth region in liver, and model depends on area information;It is optimal SolutionIt is available by the above-mentioned energy functional of minimization)
The process six includes the following steps:
Step G: convex relaxation is carried out to the model (1) in process five, is obtained:
And meet
Step H: the problem of solving above-mentioned belt restraining with Augmented Lagrange method (2) obtains optimal solution
Step I: the cut zone of each tissue is determined according to the value of each region label function, can specifically be indicated are as follows:
Ωi=x ∈ Ω | ui(x)=max (u0(x), u1(x), u2(x), u3(x)) }, respectively for i=0,1,2,3;
The process seven specifically refers to:
For the tissue binary segmentation result that process six obtains, the processing of hole operator successively is filled out with two dimension to get arriving finally Corresponding tissue regions are realized and are divided to liver, spleen, the kidney in computed tomography angiography image.
In the present invention, the convolutional neural networks in the step B specifically:
Convolutional neural networks share 10 layers of convolutional layer: the 1st layer is convolutional layer, is inputted as the original of 496 × 496 × 279 sizes Beginning image, export be for 96 sizes 248 × 248 × 136 sizes characteristic pattern, convolution kernel size be 7 × 7 × 9, step-length 2; 2nd convolutional layer inputs the characteristic pattern that 96 sizes are 124 × 124 × 68, exports the feature that 512 sizes are 62 × 62 × 64 Figure, convolution kernel size are 5 × 5 × 5, step-length 2;3rd layer to the 7th layer convolutional layer is distributed in operation on 4 GPU, on each GPU The characteristic pattern that 512 sizes are 31 × 31 × 32 is all inputted, the characteristic pattern that 512 sizes are 31 × 31 × 32, convolution kernel are exported Size is 3 × 3 × 3, step-length 1;512 characteristic patterns being distributed on 4 GPU are summed it up in the 7th layer of convolutional layer;8th convolution Layer inputs the characteristic pattern that 64 sizes are 62 × 62 × 64, exports the characteristic pattern that 512 sizes are 62 × 62 × 64, and convolution kernel is big Small is 3 × 3 × 3, step-length 1;The characteristic pattern that 9th convolutional layer input size is 124 × 124 × 128, exports 128 sizes For 124 × 124 × 128 characteristic pattern;The characteristic pattern that 10th convolutional layer input is 16 248 × 248 × 256, exports 4 248 × 248 × 256 characteristic pattern, convolution kernel size are 3 × 3 × 3, step-length 1;Then a softmax function output is acted on 4 248 × 248 × 256 image blocks;Finally, the image block of output is upsampled to 496 × 496 × 256 sizes, obtain most 4 whole probability graphs;
Wherein, average pond layer is acted on after the 1st, 2 convolutional layer, local domain size is 2 × 2 × 2;In the 7th, 8,9 Double size output layer is reset in effect respectively after a convolutional layer, and 8 channels of input are become 2 × 2 × 2, i.e. double size, and 1/ 8 port numbers;And the scale for exporting and inputting after 3 rearrangements is consistent.
In the present invention, in the process seven, two dimension is filled out the processing of hole operator and is specifically referred to:
To every tomographic image of volume data, the hole in tissue regions is detected, it is believed that also belonged to by the hole that the tissue surrounds In the tissue, the value of its corresponding binary segmentation result is set as 1 to get the tissue regions for arriving final complete and accurate.
Compared with prior art, the beneficial effects of the present invention are:
The present invention can quickly detect the position of abdomen liver, spleen and kidney using convolutional neural networks automatically, and And study obtains the prior probability image of accurate each organ, it then, can simultaneously accurately using region-competitive model It is partitioned into the profile of liver, spleen and kidney.The present invention does not need man-machine interactively, and algorithm speed is fast, and segmentation result is accurate.
Detailed description of the invention
Fig. 1 is operational flowchart of the invention.
Fig. 2 is the 118th layer of original image of three-dimensional data.
Fig. 3 is intermediate effect figure of the 118th layer data after Three dimensional convolution Processing with Neural Network.
Fig. 4 is the 118th layer data through the technology of the present invention treated final effect figure.
Fig. 5 is the 189th layer of original image of three-dimensional data.
Fig. 6 is intermediate effect of the 189th layer data after Three dimensional convolution Processing with Neural Network.
Fig. 7 is the 189th layer data through the technology of the present invention treated final effect figure.
Specific embodiment
Present invention is further described in detail with specific embodiment with reference to the accompanying drawing:
The following examples can make the professional technician of this profession that the present invention be more fully understood, but not with any side The formula limitation present invention.
As shown in Figure 1, using the multiple organ dividing method based on convolutional neural networks and region-competitive model, to computer Liver, spleen and kidney in Tomography Angiography image carry out while dividing, specific steps are as follows:
The process one specifically include the following steps:
Step A: 140 sizes are collected and are the abdomen Hepatic CT A volume data of 512 × 512 × N, and these are provided by doctor The liver segmentation standard results of data, wherein N is the number of plies of volume data.For the data of N > 286, delete in data without liver The number of plies of dirty tissue, so that the data number of plies is reduced to 286 layers;For the data of N < 286, increase in its last layer several Layer without liver organization, so that the data number of plies increases to 286 layers.
Step B, C: selecting size with machine frame from 512 × 512 × 286 image is the image of 496 × 496 × 279 sizes Block inputs in network.Random initializtion network parameter, the probability graph then exported using propagated forward.According to what is obtained Cost function between probability graph and the label of Standard Segmentation, backpropagation update network parameter.After 90 step of iteration, stop network Training.
The process two specifically: input three dimensional CT A sweep image I size is 512 × 512 × 245, adjusts window width and window level So that liver intensity range is between 0 to 255.Image is tested in trained convolutional neural networks, obtains four With original image with the probability graph L of sizei, i=0,1,2,3.Probability graph given image every belongs to the probability L of class ii(x), value Range is in [0.1,0.9].
The process three specifically: selected threshold value is 0.5, to probability graph L1Take truncation, it is believed that probability is greater than 0.5 point category In liver;To probability graph L2Take truncation, it is believed that point of the probability greater than 0.5 belongs to spleen;To probability graph L3Take truncation, it is believed that probability Point greater than 0.5 belongs to kidney;To probability graph L0Take truncation, it is believed that point of the probability greater than 0.5 belongs to background.In this way given four Histioid initial segmentation result.
The process four specifically: to the every bit pixel x in the original image I (x) of input, for background, liver, spleen Dirty and kidney prime area Si, i=0,1,2,3, count the grey level histogram H in each regioni, i=0,1,2,3.Then root According to the gray value of pixel x, by this gray value in grey level histogram HiIn shared ratio belong to i class as this pixel Probability, be denoted as pi(x)。
The process five specifically: image is calculated in each pixel according to the formula that five step B, C of process provides in explanation The C of pointi(x) and the value of g (x).In this example, it takes and determines parameter alpha1=40, α2=24, λ=12.
The process six specifically: utilize convex relaxation and that primal-dual interior pointmethod, introduce variable ps, pt, p, by energy functional Conversion are as follows:
s.t.pi(x)≤Ci(x), qi(x)≤λg(x);I=0,1,2,3
To solve above-mentioned new model, using the technology of staggeredly iteration, respectively to i=0,1,2,3, iteratively calculate following formula Son:
1, fixed variableOptimization Solution
This step can use Chambolle Projection algorithm solves;
2, fixed variable updates
3, fixed variableIt updates
4, fixed variableIt updates
Iterative steps k=k+1 repeats the above 1-4 iteration until stopping after convergence.
Wherein, c is the step-length in iteration, is set as 0.35 in this example.G is that this illustrates that boundary defined in step 4 is visited It surveys function g (x).After finally solving above-mentioned model, optimum segmentation label function
5, to obtained label functionTwo-value words, obtain final segmentation result, specifically,
Ωi=x ∈ Ω | ui(x)=max (u0(x), u1(x), u2(x), u3(x)) }, respectively for i=0,1,2,3.
In above-mentioned symbol, s.t. indicates " constrained in ";Max indicates maximizing, and min expression is minimized;K and k+1 Indicate iteration kth step and+1 step of kth;The subscript k of equal symbols indicates iteration kth step;Arg max expression, which is asked, to be made Obtain the maximum variate-value of energy function;|| ||Indicate Infinite Norm;Div indicates divergence operator;:=indicate " being defined as ";∫Ω Indicate the integral in the Ω of region;Dx indicates domain integral member;Set omega0, Ω1, Ω2, Ω3Respectively correspond background, liver, spleen Dirty and kidney region.
The process seven specifically: to the binary segmentation result that process seven obtains, fill out the processing of hole operator with two dimension.Specifically , to every tomographic image of volume data, detect the hole in liver area, it is believed that liver is also belonged to by the hole that liver surrounds, The value of its corresponding binary segmentation result is set as 1.Similarly, same processing is also done to spleen, kidney region.
The the 118th, 189 layer of the respectively exemplary three-dimensional volume data of Fig. 2,5.Fig. 3,6 is by Three dimensional convolution Processing with Neural Network Initial segmentation afterwards, Fig. 4,7 are the technology of the present invention treated final segmentation result.As can be seen that Three dimensional convolution network can be with The position of liver, kidney and spleen is accurately navigated to, but segmentation result is inaccurate;By point of region-competitive model It cuts, available each accurate segmentation result of organ.
Finally it should be noted that the above enumerated are only specific embodiments of the present invention.It is clear that the invention is not restricted to Above embodiments can also have many variations.Those skilled in the art can directly lead from present disclosure Out or all deformations for associating, it is considered as protection scope of the present invention.

Claims (3)

1. the multiple organ dividing method based on depth convolutional neural networks and region-competitive model, for abdominal CT A said three-dimensional body Data, i.e., liver, spleen, left kidney, right kidney in computed tomography angiography image carry out while dividing, and feature exists In the multiple organ dividing method based on depth convolutional neural networks and region-competitive model includes following processes:
One, training Three dimensional convolution neural network;
Two, the elder generation of liver, spleen, kidney and background in trained Three dimensional convolution neural network learning CTA volume data is utilized Test probability graph;
Three, the initial segmentation region of each tissue is determined by the prior probability image of various organization;
Four, determine that each pixel is belonging respectively to four kinds of probability organized in image;
Five, the multi_region model based on region-competitive is established;
Six, with convex optimization method solving model;
Seven, it is post-processed, obtains the profile of each organ;
The process one specifically include the following steps:
Step A: prepare training set: collecting size and be the abdomen Hepatic CT A volume data of 512 × 512 × n, and make these data Liver, spleen and kidney Standard Segmentation as a result, wherein n is the number of plies of volume data;
Step B: designing the structure of convolutional neural networks, and input picture block size is 496 × 496 × 279, and output image is four The image block that size is 496 × 496 × 256, respectively corresponds the probability that each pixel belongs to background, liver, spleen and kidney Value;
Step C: using the various parameters in training set training convolutional neural networks, training set ready in step A is put into Designed convolutional neural networks are trained in step B, obtain the various parameters in convolutional neural networks, and training is completed;
The process two specifically refers to:
If the image for needing to carry out organ segmentation is three-dimensional data I (x), image definition domain isPixel is x=(x1, x2, x3);
By in the trained convolutional neural networks of image input process one to be tested, it is endowed each pixel of image I (x) Belong to the probability value of four kinds of tissues, it is respectively L that note, which belongs to the probability value of background, liver, spleen and kidney,0(x), L1(x), L2 (x) and L3(x), the size of x ∈ Ω, this four probability graphs are identical as original image size;
Wherein, symbolExpression is contained in, and symbol ∈ expression belongs to set;
The process three specifically refers to:
Respectively to probability graph Li(x), i=0,1,2,3 each pixel point value take threshold value 0.5, and the pixel greater than threshold value belongs to this Histioid prime area Si, i=0,1,2,3;
The process four specifically refers to:
To the every bit pixel x in the original image I (x) of input, for the prime area S of background, liver, spleen and kidneyi, i =0,1,2,3, count the grey level histogram H in each regioni, i=0,1,2,3;It then, will according to the gray value of pixel x This gray value is in grey level histogram HiIn shared ratio belong to the probability of i class as this pixel, be denoted as pi(x);
The process five specifically include the following steps:
Step D: the label function for defining background, liver, spleen and kidney is respectively as follows:
For x ∈ Ω and satisfaction
ui(x) value is equal to 1 expression pixel x and belongs to the i-th class loading;
Wherein, symbol :=indicate to be defined as;Ω indicates image-region;Region Ωi, i=0,1,2,3 respectively represent background, liver, Spleen and kidney region;∑ is summation symbol;
Step E: to original image I (x), it is as follows to calculate frontier probe function g (x):
Wherein, β is positive number, and symbol :=expression is defined as;SymbolIndicate gradient operator;Symbol | |2Indicate L2 norm;
Step F: the region-competitive model based on prior probability image and regional statistical information is established:
And calculate Ci(x) :=[α1(-log pi(x))+α2(-log Li(x))] g (x), i=0,1,2,3;
Wherein, g (x) is the frontier probe function that step E is defined;Symbol :=indicate to be defined as;Ω indicates image-region;∫ΩTable Show the integral in the Ω of region;Dx indicates domain integral member;∑ is summation symbol;pi(x) belong to for the pixel x that process four calculates In the probability of class i;Li(x) the pixel x to be obtained by process two belongs to the prior probability of class i;Log indicates to ask pair with 10 the bottom of for Number;Symbol | | indicate L1Norm;α1, α2For normal number, for adjusting every weight, value is in section [20,50];Indicate gradient operator;The λ refers to regularization parameter, and for adjusting every weight, value is between [0,20];
The process six includes the following steps:
Step G: convex relaxation is carried out to the model (1) in process five, is obtained:
And meet
Step H: the problem of solving above-mentioned belt restraining with Augmented Lagrange method (2) obtains optimal solution
Step I: the cut zone of each tissue is determined according to the value of each region label function, can specifically be indicated are as follows:
Ωi=x ∈ Ω | ui(x)=max (u0(x), u1(x), u2(x), u3(x)) }, respectively for i=0,1,2,3;
The process seven specifically refers to:
For the tissue binary segmentation result that process six obtains, the processing of hole operator successively is filled out with two dimension to get final correspondence is arrived Tissue regions are realized and are divided to liver, spleen, the kidney in computed tomography angiography image.
2. the multiple organ dividing method according to claim 1 based on depth convolutional neural networks and region-competitive model, It is characterized in that, the convolutional neural networks in the step B specifically:
Convolutional neural networks share 10 layers of convolutional layer: the 1st layer is convolutional layer, is inputted as the original graph of 496 × 496 × 279 sizes Picture, export be for 96 sizes 248 × 248 × 136 sizes characteristic pattern, convolution kernel size be 7 × 7 × 9, step-length 2;2nd A convolutional layer inputs the characteristic pattern that 96 sizes are 124 × 124 × 68, exports the characteristic pattern that 512 sizes are 62 × 62 × 64, Convolution kernel size is 5 × 5 × 5, step-length 2;3rd layer to the 7th layer convolutional layer is distributed in operation on 4 GPU, on each GPU The characteristic pattern that 512 sizes are 31 × 31 × 32 is inputted, the characteristic pattern that 512 sizes are 31 × 31 × 32 is exported, convolution kernel is big Small is 3 × 3 × 3, step-length 1;512 characteristic patterns being distributed on 4 GPU are summed it up in the 7th layer of convolutional layer;8th convolutional layer The characteristic pattern that 64 sizes are 62 × 62 × 64 is inputted, the characteristic pattern that 512 sizes are 62 × 62 × 64, convolution kernel size are exported It is 3 × 3 × 3, step-length 1;The characteristic pattern that 9th convolutional layer input size is 124 × 124 × 128, exporting 128 sizes is 124 × 124 × 128 characteristic pattern;The characteristic pattern that 10th convolutional layer input is 16 248 × 248 × 256, exports 4 248 × 248 × 256 characteristic pattern, convolution kernel size are 3 × 3 × 3, step-length 1;Then it acts on a softmax function and exports 4 248 × 248 × 256 image block;Finally, the image block of output is upsampled to 496 × 496 × 256 sizes, obtain final 4 probability graphs;
Wherein, average pond layer is acted on after the 1st, 2 convolutional layer, local domain size is 2 × 2 × 2;It is rolled up at the 7th, 8,9 Double size output layer is reset in effect respectively after lamination, 8 channels of input is become 2 × 2 × 2, i.e. double size, 1/8 is logical Road number;And the scale for exporting and inputting after 3 rearrangements is consistent.
3. the multiple organ dividing method according to claim 1 based on depth convolutional neural networks and region-competitive model, It is characterized in that, two dimension is filled out the processing of hole operator and is specifically referred in the process seven:
To every tomographic image of volume data, the hole in tissue regions is detected, it is believed that this is also belonged to by the hole that the tissue surrounds The value of its corresponding binary segmentation result is set as 1 to get the tissue regions for arriving final complete and accurate by tissue.
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