CN104818342B - Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV) - Google Patents

Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV) Download PDF

Info

Publication number
CN104818342B
CN104818342B CN201510127369.3A CN201510127369A CN104818342B CN 104818342 B CN104818342 B CN 104818342B CN 201510127369 A CN201510127369 A CN 201510127369A CN 104818342 B CN104818342 B CN 104818342B
Authority
CN
China
Prior art keywords
seq
hpv
kinds
risk
detection
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CN201510127369.3A
Other languages
Chinese (zh)
Other versions
CN104818342A (en
Inventor
江春琴
林清华
施伟杰
韩元龙
郑立谋
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Amoy Diagnostics Co Ltd
Original Assignee
Amoy Diagnostics Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Amoy Diagnostics Co Ltd filed Critical Amoy Diagnostics Co Ltd
Priority to CN201510127369.3A priority Critical patent/CN104818342B/en
Publication of CN104818342A publication Critical patent/CN104818342A/en
Application granted granted Critical
Publication of CN104818342B publication Critical patent/CN104818342B/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701Specific hybridization probes
    • C12Q1/708Specific hybridization probes for papilloma
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Virology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

The invention discloses a kind of detection kit, detection architecture and method of detection HPV (HPV) 19 kinds of high-risk-types, wherein 19 kinds of high-risk HPV s include HPV16,18,26,31,33,35,39,45,51,52,53,56,58,59,66,68,70,73,82;The present invention is expanded using a plurality of universal primer to purpose fragment, amplified fragments are detected in real time using special fluorescence probe, using universal primer, the complexity of system primer consumption and system are reduced, cost is saved, 10 primer collective effects detect all high-risk-types;20 specific probe makes a distinction to each type.The present invention can detect 19 kinds of high-risk HPVs in same reaction tube, and sensitivity is high, and high specificity is simple and efficient to handle, meanwhile, for patients, save examination expense.

Description

Detection kit, detection architecture for 19 kinds of high-risk human mammilla papillomavirus (HPV) And method
Technical field
The invention belongs to biological technical field, it is used to detecting 19 kinds of high-risk human mammilla papillomavirus more particularly to a kind of Primer, probe, kit and its method.
Background technology
HPV (HPV) is a kind of papilloma vacuolating virus A category for belonging to papovaviridae, is spherical DNA Virus, can cause the scaly epithelium of human body skin mucous membrane to be bred, and the mankind are its unique hosts.Have determined HPV types at present 190 kinds are had been over, about more than 50 plant the stratified squamous epithelium of orientation infection human body genital tract skin and mucous membrane.Clinically, HPV is divided to for high-risk-type and the major class of low risk two according to HPV different subtype pathogenicities big I.High-risk-type is except can cause outer reproduction Outside device wart, it is often more important that cause external genital organs cancer, cervical carcinoma and high-grade cervical intraepithelial neoplasia (cin), high-risk-type is to cause uterine neck The main arch-criminal of cancer, about 99.7% cervical carcinoma is caused by the lasting or repeated infection of high-risk human mammilla papillomavirus;And it is low It is low in epithelium of cervix uteri that danger type HPV (HPV) mainly causes the benign lesions such as the condyloma acuminatum of men and women's external genital organs to include Lesion (CIN I) is spent, if benign lesion is diagnosed and treated not in time also the possibility for developing into canceration.Therefore, targetedly Complete detection is carried out to high-risk HPV, had great importance to the early diagnosis and therapy of cervical carcinoma.
Traditional cytology detection method is only capable of detecting the change in terms of cytology, its sensitivity is low, poor specificity, vacation Negative rate and false positive rate are high, and can not carry out parting to HPV.
The content of the invention
It is an object of the invention to provide primer, the probe for detecting 19 kinds of high-risk HPV s, 19 kinds of high-risk HPV s Including HPV16,18,26,31,33,35,39,45,51,52,53,56,58,59,66,68,70,73,82;Its primer sequence is such as Shown in table 1, as shown in table 2, interior label primer probe is as shown in table 3 for probe sequence.
The primer of table 1 and sequence
The probe of table 2 and sequence
HPV types Probe title Probe sequence Sequence number
HPV16 HPV16-P1-C CGCAGTACAAATATGTCATTATGTGCTGCC SEQ ID NO:11
HPV18 HPV18-P3-C TTAACAATATGTGCTTCTACACAGTCTCCTGTACC SEQ ID NO:12
HPV26 HPV26-P1-F GTTGATACCACCCGCAGTACTAACCTTACC SEQ ID NO:13
HPV31 HPV31-P1-F CCAATATGTCTGTGTGTGCTGCAATTGC SEQ ID NO:14
HPV33 HPV33-P1 CCACTCGCAGTACTAATATGACTTTATGCACAC SEQ ID NO:15
HPV35 HPV35-P1-F GTCTGTGTGTTCTGCTGTGTCTTCTAGTGACAG SEQ ID NO:16
HPV39 HPV39-P1-F CCTGTCTACCTCTATAGAGTCTTCCATACCTTCTAC SEQ ID NO:17
HPV45 HPV45-P1 TTATGTGCCTCTACACAAAATCCTGTGCC SEQ ID NO:18
HPV51 HPV51-P1 CTATTAGCACTGCCACTGCTGCAGTTTCC SEQ ID NO:19
HPV52 HPV52-P1-F CAGTTGTAGATACCACTCGTAGCACTAACATGACTTTA SEQ ID NO:20
HPV53 HPV53-P1-F CATGACTCTTTCTGCAACCACACAGTCTATG SEQ ID NO:21
HPV56 HPV56-P1 CTGCTACAGAACAGTTAAGTAAATATGATGCACG SEQ ID NO:22
HPV58 HPV58-P1 GATACCACTCGTAGCACTAATATGACATTATGCAC SEQ ID NO:23
HPV59 HPV59-P1 CAGCACCAATCTTTCTGTGTGTGCTTC SEQ ID NO:24
HPV66 HPV66-P1-F CTACCAGAAGTACCAACATGACTATTAATGCAGC SEQ ID NO:25
HPV68 HPV68-A-P2-F CGTTGTGGATACAACGCGCAGTACTAATT SEQ ID NO:26
HPV68 HPV68-B-P2-F TATTTCTTACTGTTGTGGATACCACTCGCAGTACC SEQ ID NO:27
HPV70 HPV70-P1-F ATTGTCTGCCTGCACCGAAACGG SEQ ID NO:28
HPV73 HPV73-P1-F GTGTAGGTACACAGGCTAGTAGCTCTACTACAACG SEQ ID NO:29
HPV82 HPV82-P3-F CACTGCTGTTACTCCATCTGTTGCACAA SEQ ID NO:30
The interior label primer probe of table 3 and sequence
Primed probe title Sequence Sequence number
E-Ex4-F1 TCAGCAACAACCCTGCCCTG SEQ ID NO:31
E-Ex4-R1 GAAGGTCTTGGTGGACCCGTC SEQ ID NO:32
E-Ex4-P1 TGGGACGGGACACGTTGCACCTCT SEQ ID NO:33
Another object of the present invention is to provide the kit of 19 kinds of high-risk HPVs of detection, it is characterised in that the reagent Box includes sequence such as SEQ ID NO:1~SEQ ID NO:Primer shown in 10, and sequence such as SEQ ID NO:11~SEQ ID NO:The one or more of 30 specific probe, and sequence such as SEQ ID NO:31~SEQ ID NO:It is interior shown in 33 Index thing and probe;
The kit uses noncompetitive internal standard detecting system, chooses one section of conservative region of human genome as interior Mark amplification purpose fragment, probe marks VIC fluorescence, is used to monitor sample DNA whether there is correct add and PCR expansions as internal standard reagent Increasing course of reaction has without exception.CY5 fluorophors, other 17 kinds of high-risk-types are marked for 16/18 high-risk HPV DNA probe HPV DNA probe flag F AM fluorophors, internal standard probe mark VIC fluorophors.
The kit forms are as shown in table 4.
Internal standard testing result can be truly reflected sample DNA mass and experimental implementation situation, can be used as to reagent, The Quality Control of DNA mass and experimental implementation, the amplification region of selection is human EGFR gene conservative section relatively, and target sequence is long Spend about 100bp.
The kit forms of table 4
Another aspect of the present invention provides a kind of reaction system for being used to detect 19HPVs, specific as follows:
The application method of kit of the present invention comprises the following steps:
1. sample collection:Applicable specimen types have urogenital tract secretion cotton swab, genital tract scraping blade, tissue biopsy Sample etc.;
2. extract sample DNA;
3. the DNA extracted is mixed according to correspondence ratio with mixed enzyme, and it is added in PCR reaction tubes;And by HPV19 Positive control and HPV19 negative controls are separately added into corresponding PCR reaction tubes;
4. the Ct values shown according to fluorescent PCR amplification instrument judge testing result;
5. the explanation of testing result, as shown in table 5:
1. HEX (or VIC) passage should have substantially or have the amplification curve of " S " type trend to rise, and Ct value≤29.If Ct values >29 or HEX passages rise without obvious amplification curve, illustrate add DNA contain PCR inhibitor or DNA additions it is very few, it is necessary to Again extract or increase DNA applied sample amounts and tested again;In such cases, if FAM the and CY5 passages of sample one of them or two Individual rise and Ct value≤27, then the sample need not be detected again, as a result be judged as that high-risk HPV DNA is positive.
2. the amplification curve of CY5 passages is judged as the types of HPV 16/18 sun in typical " S " type and Ct value≤27, then result Property.
1. the amplification curve of FAM passages is judged as other high-risk-types of HPV in typical " S " type and Ct value≤27, then result It is positive.
2. a sample is probably that the types of HPV 16/18 and other high-risk-types are simultaneously positive.
The sample results of table 5 judge
The beneficial effects of the invention are as follows:
Molecular diagnostic techniques can then improve the sensitivity and specificity of HPV detections.By cytology detection method and molecule Diagnostic method combines the diagnostic level that can preferably improve that cervical carcinoma and other anogenital cancers become.The present invention provides a kind of highly sensitive The primer, probe and detection architecture that are used to detect the parting of HPV 19 of degree and high specific.The detection kit is adopted Purpose fragment is expanded with a plurality of universal primer, amplified fragments detected in real time using special fluorescence probe, is grasped Make that simple and efficient there is provided a kind of fast and reliable detection method.This method can realize that same reaction tube disposably detects 19 kinds HPV (HPV), substantially reduces time and the examination expense of detection, for clinical early diagnosis provide it is important according to According to.
The present invention can detect 19 kinds of high-risk HPVs in same reaction tube, i.e., the present invention uses general primer and pin To various other Idiotype probe, the difference of the probe by adding Idiotype can constitute detection one or more, at most may be used To detect 19 kinds of high-risk HPVs.The amplified fragments of selection are located at the L1 gene regions of HPV genomes, using a plurality of universal primer pair Purpose fragment is expanded, and amplified fragments is detected in real time using special fluorescence probe, using noncompetitive internal standard Detecting system, chooses one section of conservative region of human genome as amplification of internal standard purpose fragment, probe marks VIC fluorescence, as Internal standard reagent is used to monitor sample DNA and whether there is correctly to add have without exception with pcr amplification reaction process.For 16/18 high-risk-type HPV DNA probe mark CY5 fluorophors, other 17 kinds of high-risk HPV DNA probe flag F AM fluorophors, internal standard Probe marks VIC fluorophors.Judge finally according to PCR amplification curves among system with the presence or absence of kit detection range High-risk HPV DNA.Using universal primer, the complexity of system primer consumption and system is reduced, cost has been saved;10 are drawn Thing collective effect detects all high-risk-types;19 specific probe makes a distinction to each type.PCR amplifications of the present invention are anti- Answer system simultaneously contain UNG enzymes, can selectively be broken the uracil glycosidic bond in the PCR fragment containing dU, effectively reduce because The false positive that PCR primer pollution is produced.
Sensitivity of the present invention is high (reaching 5 copies/reaction, improve more than 2 orders of magnitude than existing certain methods), specifically Property it is strong, it is simple and efficient to handle, meanwhile, for patients, save examination expense.
Brief description of the drawings
Fig. 1 is HPV16 and HPV18 sensitivity analysis figures.
Fig. 2 is 17 kinds of HPV sensitivity analysis figures.
Fig. 3 is national full-length genome parting reference material (HPV16 and HPV18) detection figure.
Fig. 4 is national full-length genome parting reference material (HPV26/31/33/35/45/56) detection figure.
Fig. 5 is national full-length genome parting reference material (HPV58/59/66/6/73/82) detection figure.
Fig. 6 is national full-length genome parting reference material negative reference product N1-N5 detection figures.
Fig. 7 is national full-length genome parting reference material (HPV6/11/61/67/69/71/81) detection figure.
Fig. 8 is clinical negative sample testing result figure.
Fig. 9 is HPV16/18 positive clinical sample amplification figures.
Figure 10 is other high-risk-type positive clinical pattern detection result figures.
Embodiment
Below in conjunction with specific embodiment, the present invention is expanded on further.It should be understood that these embodiments be only used for the present invention and It is not used in limitation the scope of the present invention.Unless otherwise defined or described herein, described in this patent scientific and technical term and this area is general Logical technical staff is understood with identical implication.
Embodiment 1
The present embodiment using 19 kinds of high-risk human mammilla papillomavirus DNA plasmids in full-length genome parting reference material as template, Real-time PCR detection is carried out using kit of the present invention:
(1) PCR reaction systems are set up
Using the probe and special primer of above-mentioned design, 5 μ L reference materials DNA are taken as reaction template, it is anti-using following PCR System is answered to be expanded, pcr amplification reaction system is:
Having added the PCR reaction tubes of template to be put into real-time PCR detection instrument, carried out by following amplification program:First Stage:50 DEG C of 2min, 95 DEG C of 5min, 1 circulation;Second stage:95 DEG C of 5s, 40 DEG C of 30s, 72 DEG C of 30s, 10 circulations;3rd Stage:95 DEG C of 5s, 60 DEG C of 35s, 72 DEG C of 30s, 35 circulations;Phosphor collection:Collected during 60 DEG C of phase III FAM, HEX (or ) and CY5 signals VIC.
(2) the Ct values shown according to fluorescent PCR amplification instrument judge testing result, as shown in table 5.
1. HEX (or VIC) passage should have substantially or have the amplification curve of " S " type trend to rise, and Ct value≤29.If Ct values >29 or HEX passages rise without obvious amplification curve, illustrate add DNA contain PCR inhibitor or DNA additions it is very few, it is necessary to Again extract or increase DNA applied sample amounts and tested again;In such cases, if FAM the and CY5 passages of sample one of them or two Individual rise and Ct value≤27, then the sample need not be detected again, as a result be judged as that high-risk HPV DNA is positive.
2. the amplification curve of CY5 passages is judged as the types of HPV 16/18 sun in typical " S " type and Ct value≤27, then result Property.
3. the amplification curve of FAM passages is judged as other high-risk-types of HPV in typical " S " type and Ct value≤27, then result It is positive.
4. a sample is probably that the types of HPV 16/18 and other high-risk-types are simultaneously positive.
Sensitivity analysis:Concentration is the reference material DNA of 500 copies after taking quantitatively, carries out 10 times of gradient dilutions, 3 are done altogether Individual dilution gradient, 5 μ L, 8 parallel carry out amplified reactions are added per secondary response.As a result show, sensitivity of the present invention can be detected To 5 copies/μ L.
Testing result shows that detection architecture of the invention can accurately detect 19 kinds of high-risk HPVs, and the sensitivity of detection can Reach 5 copies/μ L.
Embodiment 2
Reaction system such as embodiment 1, is referred to using kit of the present invention to the national full-length genome parting of HPV Each component in product is detected, investigates the reaction system finally determined and HPV full-length genome parting country is referred to The detection case of product, result of the test such as Fig. 3-7.
Result of the test shows that this kit is to the negative reference in HPV full-length genome parting National reference Product N1-N5 detection be feminine gender, in HPV full-length genome parting National reference 7 kinds of low risks (HPV6, 11st, 61,67,69,71,81) positive reference product are detected as feminine gender, to HPV full-length genome parting National reference In 13 kinds of high-risk-types (HPV16,18,26,31,33,35,45,56,58,59,66,73,82) positive reference product examine survey be sun Property, show that the reaction system finally determined is to the detection coincidence rate of HPV full-length genome parting National reference 100%.
Embodiment 3
Clinical sample is detected with the present invention, 80 clinical samples are detected altogether, and have with sub- energy biotechnology (Shenzhen) The human papilloma virus kit for detecting nucleic acid (PCR- fluorescence probe methods) (17 type) of limit company is used as control.Utilize the present invention The step of real-time fluorescence PCR system detects 80 clinical samples is as follows.
(1) detection sample DNA is extracted
Detect that sample includes urogenital tract secretion cotton swab, genital tract scraping blade, tissue biopsy specimen etc..
In centrifuge tube clean the sample transfer 1mL to one gathered, 12,000rpm centrifuge 1 minute;Carefully siphon away 700 μ L of supernatant liquid, 350 μ L Buffer VDL12 (plus absolute ethyl alcohol) are added into remaining precipitated liquid;Concussion mixes 10s, uses Hand held 5~10s of centrifuge, is placed in 80 DEG C of digestion 3min in incubator;Concussion mixing 10s, hand held centrifuge 5~ 10s, whole liquid are transferred in CB3DNA adsorption columns, 12000rpm centrifugations 30s;The liquid in collecting pipe is outwelled, is inhaled toward DNA 400 μ L Buffer RTW, 12000rpm centrifugation 3min (not empty to get rid of) are added in attached column;Collecting pipe is abandoned, adsorption column is carefully turned Move in clean 1.5mL centrifuge tubes, 80 μ L Buffer BDE are added dropwise toward DNA absorption center membranes;It is stored at room temperature 2min, 12000rpm centrifuges 1min, collects sample DNA and preserves.
(2) PCR reaction systems are set up
Using the probe and special primer of above-mentioned design, 5 μ L reference materials DNA are taken as reaction template, it is anti-using following PCR System is answered to be expanded, pcr amplification reaction system is:
Having added the PCR reaction tubes of template to be put into real-time PCR detection instrument, carried out by following amplification program:First Stage:50 DEG C of 2min, 95 DEG C of 5min, 1 circulation;Second stage:95 DEG C of 5s, 40 DEG C of 30s, 72 DEG C of 30s, 10 circulations;3rd Stage:95 DEG C of 5s, 60 DEG C of 35s, 72 DEG C of 30s, 35 circulations;Phosphor collection:Collected during 60 DEG C of phase III FAM, HEX (or ) and CY5 signals VIC.
(3) the Ct values shown according to fluorescent PCR amplification instrument judge testing result, as shown in table 5.
1. HEX (or VIC) passage should have substantially or have the amplification curve of " S " type trend to rise, and Ct value≤29.If Ct values >29 or HEX passages rise without obvious amplification curve, illustrate add DNA contain PCR inhibitor or DNA additions it is very few, it is necessary to Again extract or increase DNA applied sample amounts and tested again;In such cases, if FAM the and CY5 passages of sample one of them or two Individual rise and Ct value≤27, then the sample need not be detected again, as a result be judged as that high-risk HPV DNA is positive.
2. the amplification curve of CY5 passages is judged as the types of HPV 16/18 sun in typical " S " type and Ct value≤27, then result Property.
3. the amplification curve of FAM passages is judged as other high-risk-types of HPV in typical " S " type and Ct value≤27, then result It is positive.
4. a sample is probably that the types of HPV 16/18 and other high-risk-types are simultaneously positive.
As a result show, 80 detected altogether clinical sample, contrast agents box detection positive sample 39, negative sample 41 Example, and this kit detection positive sample 43, negative sample 37;Compared with contrast agents box, the positive symbol of this kit Conjunction rate is up to 92.3%, and negative match-rate is up to 97.6%, and total coincidence rate is up to 95%, and result of the test visualizingre agent box has been criticized with market Quasi- kit has good coincidence rate.Such as Fig. 8-10.

Claims (3)

1. a kind of kit for being used to detect 19 kinds of high-risk human mammilla papillomavirus, it is characterised in that including:
1) primer
General HPV-F1TGCCTGGGGYAATCAGTTATTTGTTAC SEQ ID NO:1
General HPV-R3CCTCTGCCATGICKAATATATTSCTTAA SEQ ID NO:2
General HPV-R5CCTCTGCCATGYCKAATATAYTSCTTAA SEQ ID NO:3
General HPV-R6CCTCTGCCATGYCKAATATACTSCTTAA SEQ ID NO:4
HPV39 HPV-390-F1TGCCTGGGGCAATCAGTTATTTGTTAC SEQ ID NO:5
HPV53 HPV-530-R1CCTCTGCCATGTCTAAGGTATTCCTTAA SEQ ID NO:6
HPV51 HPV-510-R CCTCTGCCATGACTAACCTATTCCTTAA SEQ ID NO:7
HPV16 HPV-160-R CCTCTGCCATGYCTAATATAYTSCTTAA SEQ ID NO:8
HPV18 HPV-180-F TGCCTGGCATAATCAATTATTTGTTAC SEQ ID NO:9
HPV52 HPV-520-R CCTCTGCCATGTCTAATATATTCCTTAA SEQ ID NO:10;
2) probe
HPV16 HPV16-P1-C CGCAGTACAAATATGTCATTATGTGCTGCC SEQ ID NO:11
HPV18 HPV18-P3-C TTAACAATATGTGCTTCTACACAGTCTCCTGTACC SEQ ID NO:12
HPV26 HPV26-P1-F GTTGATACCACCCGCAGTACTAACCTTACC SEQ ID NO:13
HPV31 HPV31-P1-F CCAATATGTCTGTGTGTGCTGCAATTGC SEQ ID NO:14
HPV33 HPV33-P1 CCACTCGCAGTACTAATATGACTTTATGCACAC SEQ ID NO:15
HPV35 HPV35-P1-F GTCTGTGTGTTCTGCTGTGTCTTCTAGTGACAG SEQ ID NO:16
HPV39 HPV39-P1-F CCTGTCTACCTCTATAGAGTCTTCCATACCTTCTAC SEQ ID NO:17
HPV45 HPV45-P1 TTATGTGCCTCTACACAAAATCCTGTGCC SEQ ID NO:18
HPV51 HPV51-P1 CTATTAGCACTGCCACTGCTGCAGTTTCC SEQ ID NO:19
HPV52 HPV52-P1-F CAGTTGTAGATACCACTCGTAGCACTAACATGACTTTA SEQ ID NO:20
HPV53 HPV53-P1-F CATGACTCTTTCTGCAACCACACAGTCTATG SEQ ID NO:21
HPV56 HPV56-P1 CTGCTACAGAACAGTTAAGTAAATATGATGCACG SEQ ID NO:22
HPV58 HPV58-P1 GATACCACTCGTAGCACTAATATGACATTATGCAC SEQ ID NO:23
HPV59 HPV59-P1 CAGCACCAATCTTTCTGTGTGTGCTTC SEQ ID NO:24
HPV66 HPV66-P1-F CTACCAGAAGTACCAACATGACTATTAATGCAGC SEQ ID NO:25
HPV68 HPV68-A-P2-F CGTTGTGGATACAACGCGCAGTACTAATT SEQ ID NO:26
HPV68 HPV68-B-P2-F TATTTCTTACTGTTGTGGATACCACTCGCAGTACC SEQ ID NO:27
HPV70 HPV70-P1-F ATTGTCTGCCTGCACCGAAACGG SEQ ID NO:28
HPV73 HPV73-P1-F GTGTAGGTACACAGGCTAGTAGCTCTACTACAACG SEQ ID NO:29
HPV82 HPV82-P3-F CACTGCTGTTACTCCATCTGTTGCACAA SEQ ID NO:30
3) internal standard
E-Ex4-F1 TCAGCAACAACCCTGCCCTG SEQ ID NO:31
E-Ex4-R1 GAAGGTCTTGGTGGACCCGTC SEQ ID NO:32
E-Ex4-P1 TGGGACGGGACACGTTGCACCTCT SEQ ID NO:33。
2. a kind of kit for being used to detect 19 kinds of high-risk human mammilla papillomavirus as claimed in claim 1, it is characterised in that
Also include:
HPV19 mixed enzymes:Including Taq archaeal dna polymerases, the μ L of 1 pipe of UNG enzymes 27
HPV19 positive controls:Including the μ L of 18/26 type plasmids of HPV, 1 pipe 50.
3. a kind of reaction system for being used to detect 19 kinds of HPVs, specific as follows:
DEPC H2O
10 × PCR buffer solutions
MgCl2 20.0-50.0mmol
50-200 μm of ol of each pair of primer of claim 1
50-200 μm of ol of each pair of probe of claim 1
dNTP 20.0-30.0mmol
Mixed enzyme 0.5-1.0 μ L
Cumulative volume 30-50 μ L.
CN201510127369.3A 2015-03-23 2015-03-23 Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV) Active CN104818342B (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CN201510127369.3A CN104818342B (en) 2015-03-23 2015-03-23 Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
CN201510127369.3A CN104818342B (en) 2015-03-23 2015-03-23 Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV)

Publications (2)

Publication Number Publication Date
CN104818342A CN104818342A (en) 2015-08-05
CN104818342B true CN104818342B (en) 2017-09-22

Family

ID=53728822

Family Applications (1)

Application Number Title Priority Date Filing Date
CN201510127369.3A Active CN104818342B (en) 2015-03-23 2015-03-23 Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV)

Country Status (1)

Country Link
CN (1) CN104818342B (en)

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN109554506A (en) * 2016-01-15 2019-04-02 艾康生物技术(杭州)有限公司 It is a kind of for detecting the design method of the primer and probe of pathogen
CN105950788B (en) * 2016-06-15 2019-07-30 亚能生物技术(深圳)有限公司 Detect the primer, probe and kit of 18 kinds of high-risk HPV nucleic acid
CN107267663A (en) * 2017-05-08 2017-10-20 常州金麦格生物技术有限公司 HPV detection methods and kit
CN108660254B (en) * 2018-05-30 2023-07-28 杭州千基生物科技有限公司 Primer, probe, kit and method for detecting genital tract pathogen nucleic acid
CN110938712A (en) * 2019-12-27 2020-03-31 苏州药明检测检验有限责任公司 Primer, probe, kit and method for detecting human papilloma virus based on real-time fluorescent quantitative PCR technology
CN111455108B (en) * 2020-04-14 2022-09-13 天津普瑞赛斯分子诊断技术有限责任公司 Kit and detection method for detecting 14 high-risk HPV (human papilloma Virus) types
CN114214463A (en) * 2021-12-28 2022-03-22 广州安必平医药科技股份有限公司 Primer probe composition for detecting HPV (human papillomavirus) and application thereof

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20110111389A1 (en) * 2001-11-07 2011-05-12 Diagcor Bioscience Incorporation Limited Rapid genotyping analysis for human papillomavirus and the device thereof
GB0516145D0 (en) * 2005-08-05 2005-09-14 Genomica Sau In vitro diagnostic kit for identification of human papillomavirus in clinical samples
NO330943B1 (en) * 2009-04-30 2011-08-22 Unilabs Telelabs As A method for detecting and / or typing and / or quantifying human papillomavirus (HPV) type, primers and probes thereof, and diagnostic and use thereof.
CN103320533A (en) * 2013-06-26 2013-09-25 清华大学 HPV (human papillomavirus) DNA (deoxyribonucleic acid) genetic typing method and kit thereof

Also Published As

Publication number Publication date
CN104818342A (en) 2015-08-05

Similar Documents

Publication Publication Date Title
CN104818342B (en) Detection kit, detection architecture and method for 19 kinds of high-risk human mammilla papillomavirus (HPV)
CN102994651B (en) Primer, probe and kit for fluorescence PCR (Polymerase Chain Reaction) detection of 18 high-risk human papilloma viruses
CN101487063B (en) Human papilloma virus infection gene amplification fluorescent detection kit
CN105506173B (en) The kit for detecting nucleic acid and its application method of human papilloma virus and application
CN107739761A (en) It is a kind of to be used for HPV partings and the high-flux sequence detection method of integration
CN105755169B (en) Detection and typing kit for high-risk human papilloma virus and application thereof
CN101017141A (en) Polymerase chain reaction (PCR) method for diagnosing human papillomavirus (HPV) and reagent kit thereof
CN105603121A (en) Method, oligonucleotide and kit for detecting high-risk HPV (human papilloma viruses)
EP3187596B1 (en) Method for detecting and typing high-risk human papillomaviruses
CN102154524B (en) Nucleic acid detection kit for 12+2 high-risk human papilloma virus (HPV)
CN107841576A (en) 14 kinds of Combining high-risk human papillomavirus E6/E7 areas mRNA detection kits
CN105087827A (en) Primer, probe and kit for detecting type-16 HPV (human papillomavirus)
CN103725792A (en) Human papilloma virus (24 types) detection (fluorescent PCR method) kit and detection method
CN105018647B (en) A kind of kit and its detection method based on the accurate quantitative typing detection HPV16/18 of digital pcr
Lippert et al. Targeted next generation sequencing panel for HPV genotyping in cervical cancer
Chalabiani et al. Retrospective analysis of prevalence of high-risk and low-risk Human Papillomavirus (HPV) genotypes in iranian women during 2013-2016
CN104017906B (en) A kind of HPV high-risk-type parting fluorescence PCR detection kit
CN105803110A (en) Kit capable of carrying out typing and detection on many kinds of human papilloma viruses simultaneously and applications of kit
CN108179226B (en) Nucleic acid composition for detecting human papilloma virus, application thereof and kit
CN112575123B (en) Primer combination, probe combination and human papillomavirus nucleic acid detection kit
CN101886137B (en) Method for qualitatively detecting high-risk HPV by using fluorescence quantitative PCR and kit thereof
ES2525233T3 (en) Identification and quantification of oncogenic HPV nucleic acids through real-time PCR assays
CN106048081A (en) HPV (human papilloma virus) typing detection primers as well as detection method and application thereof
CN102140554B (en) Fluorescent PCR kit for detecting human papilloma virus subtypes
CN109609696B (en) Nucleic acid reagent, kit, system and method for detecting human papilloma virus

Legal Events

Date Code Title Description
C06 Publication
PB01 Publication
EXSB Decision made by sipo to initiate substantive examination
SE01 Entry into force of request for substantive examination
GR01 Patent grant
GR01 Patent grant
CP03 Change of name, title or address

Address after: No. 39, Haicang Ding Shan Road, Haicang District, Xiamen, Fujian

Patentee after: AMOY DIAGNOSTICS Co.,Ltd.

Address before: 361000 the 5 floor of No. 2 factory, Chuang Chuang center, 289 Weng Jiao Road, Xinyang street, Haicang District, Xiamen, Fujian, China.

Patentee before: Xiamen Aide Biomedical Technology Co.,Ltd.

CP03 Change of name, title or address
TR01 Transfer of patent right

Effective date of registration: 20210303

Address after: 361000 one of 39 Dingshan Road, Haicang District, Xiamen City, Fujian Province

Patentee after: Xiamen Xiawei Health Technology Co.,Ltd.

Address before: No. 39, Haicang Ding Shan Road, Haicang District, Xiamen, Fujian

Patentee before: AMOY DIAGNOSTICS Co.,Ltd.

TR01 Transfer of patent right
TR01 Transfer of patent right

Effective date of registration: 20230406

Address after: No. 39, Haicang Ding Shan Road, Haicang District, Xiamen, Fujian

Patentee after: AMOY DIAGNOSTICS Co.,Ltd.

Address before: 361000 one of 39 Dingshan Road, Haicang District, Xiamen City, Fujian Province

Patentee before: Xiamen Xiawei Health Technology Co.,Ltd.

TR01 Transfer of patent right