CN104560725A - Kit for high-throughput screening of ethanol-producing fungi based on flow cytometry and application thereof - Google Patents

Kit for high-throughput screening of ethanol-producing fungi based on flow cytometry and application thereof Download PDF

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CN104560725A
CN104560725A CN201410753166.0A CN201410753166A CN104560725A CN 104560725 A CN104560725 A CN 104560725A CN 201410753166 A CN201410753166 A CN 201410753166A CN 104560725 A CN104560725 A CN 104560725A
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reagent
ethanol
flow cytometry
fungi
test kit
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CN104560725B (en
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虞龙
刘媛
李玉燕
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Nanjing Tech University
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Abstract

The invention discloses a kit for high-throughput screening of ethanol-producing fungi based on flow cytometry and application thereof, wherein the kit comprises a kit body and reagents, and also comprises a cell culture plate, a centrifuge tube and a copper sieve, wherein the reagents are as follows: reagent A: citric acid: 6.15 g; sodium citrate: 17.544 g; 1000 mL; and (3) reagent B: propidium Iodide (PI): 0.3 mg; 2, 7-Dihydrodichloro-fluorescent yellow sodium diacetate: 0.3 mg; and (3) reagent C: glucose: 2g, 50 mL; and (3) reagent D: glucose: 12g, 50 mL; and (3) reagent E: yeast powder: 0.5 g; tryptone: 0.5 g; ammonium hydrogen phosphate: 0.05 g; magnesium sulfate: 0.025g, pH5.5, 50 mL; and (3) reagent F: yeast powder: 0.05 g; tryptone: 0.05 g; ammonium hydrogen phosphate: 0.05 g; magnesium sulfate: 0.025g, pH5.5, 50 mL.

Description

Based on test kit and the application thereof of Flow Cytometry high flux screening producing and ethanol fungi
Technical field
The invention belongs to technical field of microbial fermentation, be specifically related to a kind of test kit based on Flow Cytometry high flux screening producing and ethanol fungi and application thereof.
Background technology
Biomass energy is the important component part of following sustainable energy system, from this century, bioenergy enters the research field of renewable resources, it is with pollution-free, efficiency advantages of higher becomes the Main way utilizing the energy in the world, therefore develops the common objective that bioenergy has become various countries at present.And in the middle of bioenergy, at present research is the most extensive, utilization and the exploitation of the most effective is exactly bio-ethanol.By the scientific and technological level of current society and the degree of development, in the coming few decades that can predict, alcohol fuel completely likely realizes industrialization to produce.
Excellent microbial strains is basis and the key of fermentation industry, make the kind of fermentation industry product, seed output and quality has greatly improved, the production bacterial strain of first necessary seed selection excellent property, the bacterial strain of excellent property can bring very high economic benefit for producing.Mainly contain in the method for high-yield ethanol yeast saccharomyces cerevisiae screening at present, alcohol in high concentration plate screening model, TTC compound slab sieve method etc.These method workloads are all very large, when carrying out bacterium colony screening, often rely on experimenter's experience, by means of visual inspection, select object bacterial strain, there is blindness, greatly reduce screening efficiency.
Active oxygen (reactive oxygen species, ROS) refers to that some derivative of oxygen is as superoxide anion (O 2-), hydroxy radical qiao (OH) and hydrogen peroxide (H 2o 2) etc., excessive ROS can make biomacromolecule as DNA, protein, lipid generation peroxidation chain reaction, causes cyto-architectural damage, affects physiologically active.Howlett have detected the change of ROS in the yeast saccharomyces cerevisiae born of the same parents caused by cupric ion, finds that the horizontal cell cycle of ROS has certain influence.There are some researches show, yeast cell overall activity and the level of producing ROS in alcohol ability and its body are negative correlativing relation to a certain degree, and this is for we provide strong support using the content of ROS in logarithmic phase yeast body as screening conditions.
Flow Cytometry (Flow cytometry, FCM) spectrochemical analysis can be carried out to individual cells rapidly, researchist is made to set up the multidimensional presentation of individual cells in colony, there is a lot of advantage compared with the method for cell count of routine, as advantages such as tolerance range are high, reproducible.It is for counting the molecule be suspended in fluid and sorting.By using specific dyestuff to dye to sample, thus the fluorescent signal of excitation-detection mark, realize cell quantitative at a high speed, one by one and sorting.
Summary of the invention
The object of this invention is to provide a kind of test kit based on Flow Cytometry high flux screening producing and ethanol fungi and application thereof, this test kit is based on Flow Cytometry, the level utilizing fungal cell's overall activity and produce ROS in alcohol ability and its body is negative correlativing relation to a certain degree, judge the product alcohol ability of tested fungi, applying this test kit can the fungi of screening high-yield ethanol rapidly and efficiently, improves industrial screening efficiency.
In order to achieve the above object, the technical solution used in the present invention is:
Based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, comprise box body and reagent, also comprise Tissue Culture Plate, centrifuge tube and copper sieve, described reagent comprises each one bottle of reagent A, B, C, D, E, F:
Reagent A: citric acid: 6.15g; Trisodium Citrate: 17.544g; Add distilled water and be settled to 1000mL, encapsulate after autoclaving;
Reagent B: propidium iodide (PI): 0.3mg; 2,7-dihydro dichlorofluorescein sodium Diacetate: 0.3mg;
Reagent C: glucose: 2g, adds distilled water and is settled to 50mL, encapsulate after autoclaving;
Reagent D: glucose: 12g, adds distilled water and is settled to 50mL, encapsulate after autoclaving;
Reagent E: yeast powder: 0.5g; Tryptones: 0.5g; Secondary ammonium phosphate: 0.05g; Magnesium sulfate: 0.025g, adds distilled water 40mL and dissolves, and regulates pH to 5.5, then is settled to 50mL with distilled water, encapsulate after autoclaving by NaOH solution;
Reagent F: yeast powder: 0.05g; Tryptones: 0.05g; Secondary ammonium phosphate: 0.05g; Magnesium sulfate: 0.025g, adds distilled water 40mL and dissolves, and regulates pH to 5.5, then is settled to 50mL with distilled water, encapsulate after autoclaving by NaOH solution.
Described Tissue Culture Plate is 48 hole ~ 96 porocyte culture plates.
Described centrifuge tube is 0.5 ~ 1.5mL centrifuge tube.
Described copper sieve is 200 ~ 400 orders.
Described Tissue Culture Plate is 1 ~ 2 piece, and centrifuge tube is 48 ~ 96, and copper sieves 1.
Described reagent B is divided in brown centrifuge tube.
Described NaOH solution concentration is 1 ~ 5mol/L.
Described Tissue Culture Plate, centrifuge tube and copper sieve all carried out sterilising treatment, and can be uv irradiating sterilizing, also can be heat sterilizing.Under described test kit is kept at 4 DEG C of conditions.
The described application of test kit in screening producing and ethanol fungi based on Flow Cytometry high flux screening producing and ethanol fungi.
Described application, comprises the steps:
Reagent B: propidium iodide (PI): 0.3mg; 2,7-dihydro dichlorofluorescein sodium Diacetate (DCFH-DA): 0.3mg; Facing the used time adds aseptic double-distilled water and is settled to 3mL, and dark place filters sterilization, now with the current;
Reagent E fully mixes with reagent C, and 4 DEG C save backup;
Reagent F fully mixes with reagent D, and 4 DEG C save backup;
Test kit using method of the present invention is as follows:
1), the configuration of reagent B: propidium iodide (PI): 0.3mg; 2,7-dihydro dichlorofluorescein sodium Diacetate (DCFH-DA): 0.3mg; Facing the used time adds aseptic double-distilled water and is settled to 3mL, and dark place filters sterilization, now with the current;
2), the preparation of bacteria suspension
Get tested bacterium liquid 1mL in 4 DEG C, the centrifugal 10min of 5500r/min, discard supernatant liquid, bacterial sediment reagent A cleans both sides, then suspends by 1mL reagent A, obtains bacteria suspension, for subsequent use;
3), as required various mutagenic treatment is carried out to bacteria suspension, such as, after the process such as chemomorphosis, uv irradiating mutagenesis, ion beam mutation mutagenesis, obtain the bacteria suspension after mutagenesis, for subsequent use;
4), by reagent C fully mix with reagent E, add reagent C+E in the orifice plate, addition is 500-1000 μ l/ hole; To step 2) add 30 μ l reagent B in the bacteria suspension that obtains, place 10min in 37 DEG C of lucifuges, with the sieved filter of 300 order copper after, detect on flow cytometer, collect with orifice plate, each hole collection 1 × 10 4individual thalline; Put into constant-temperature table, 37 DEG C, 250r/min cultivates 24h;
5), by reagent D fully mix with reagent F, divide and be filled in aseptic 10mL centrifuge tube, 5mL/ manages;
6), the bacterium liquid that will obtain in step 4), add to one to one in the ready centrifuge tube of step 5 institute, 500-1000 μ l/ manages; Put into constant-temperature table, 37 DEG C, 150r/min cultivates 60h;
7), detecting step 6) content of alcohol in the fermented liquid that obtains.
Beneficial effect: the test kit based on Flow Cytometry high flux screening producing and ethanol fungi provided by the invention and application thereof, this test kit is based on Flow Cytometry, the level utilizing fungal cell's overall activity and produce ROS in alcohol ability and its body is negative correlativing relation to a certain degree, judge the product alcohol ability of tested fungi, applying this test kit can the fungi of screening high-yield ethanol rapidly and efficiently, improve industrial screening efficiency, save labour cost, test kit agents useful for same amount is few simultaneously, 48 ~ 96 samples can be screened simultaneously, greatly raise the efficiency.
Embodiment
Below in conjunction with specific examples, the present invention is described in detail.
embodiment 1
With the impact of kit measurement ion beam mutation of the present invention on ROS content in Saccharomyces cerevisiae
One, solution is configured
Reagent B: propidium iodide (PI): 0.3mg; 2,7-dihydro dichlorofluorescein sodium Diacetate (DCFH-DA): 0.3mg, is divided in brown centrifuge tube, keeps in Dark Place, and adds aseptic double-distilled water and is settled to 3mL, and dark place filters sterilization, now with the current;
Two, ion beam mutation is measured on the impact of ROS content in Saccharomyces cerevisiae
1. pair yeast saccharomyces cerevisiae carries out ion beam mutation
A () cultured bacterium liquid, in 4 DEG C, the centrifugal 10min of 5500r/min, discards supernatant liquid, reagent A cleaning twice, then uses reagent A suspended yeast cell precipitation thing, waits until N +inject process.
B () dilutes above-mentioned bacteria suspension with the protection liquid (0.5% (wt) starch and 0.5% (wt) glucose) of sterilizing; get diluent 100 μ L; be spread evenly across with sterile glass spatula the sterile petri dish central authorities that diameter is 90mm, sterile wind dries up makes mycoderm.The mycoderm of preparation is placed in respectively on the aseptic target platform of ion implanter vacuum target chamber, 1 × 10 -3adopt energy to be 15KeV under pa vacuum state, dosage is respectively 0,4 × 10 15, 5 × 10 15, 6 × 10 15, 8 × 10 15, 10 × 10 15, 11 × 10 15ions/cm 2, N+ inject yeast mycoderm, to soak with 1.5mL reagent A respectively, wash-out, obtain the bacterium liquid eluted, the bacterium liquid of acquisition is named ck, a, b, c, d, e, f successively.
2. kit measurement
A () gets each 1mL of tested bacterium liquid ck, a, b, c, d, e, f in 4 DEG C, the centrifugal 10min of 5500r/min, discard supernatant liquid, bacterial sediment reagent A cleans one time, then suspends by 1mL reagent A, obtains bacteria suspension, for subsequent use;
B reagent C fully mixes with reagent E by (), add reagent C+E in 48 orifice plates, and addition is 500-1000 μ l/ hole;
Add 30 μ l reagent B in c bacteria suspension that () obtains to step (a), place 10min in 37 DEG C of lucifuges, with the sieved filter of 300 order copper after, detect on flow cytometer, collect with ready 48 orifice plates in step (b), each hole collection 1 × 10 4individual thalline, put into constant-temperature table, 37 DEG C, 250r/min cultivates 24h, obtains bacterium liquid;
D reagent D fully mixes with reagent F by (), point to be filled in 48 aseptic 10mL centrifuge tubes, 5mL/ manages;
E bacterium liquid that () will obtain in step (c), add to one to one in the ready centrifuge tube of step (d) institute, 1000 μ l/ manage; Put into constant-temperature table, 37 DEG C, 150r/min cultivates 60h;
Three, detected result is as table 1.
Table 1:
N+ ion implantation dosage (× 10 15ions/cm 2 0 4 5 6 8 10 11
DCF fluorescence intensity 65.38 142.38 234.65 139.63 198.55 248.89 265.87
embodiment 2
With the impact of kit measurement ultraviolet radiation mutagenesis of the present invention on ROS content in Saccharomyces cerevisiae
One, solution is configured
Reagent B: propidium iodide (PI): 0.3mg; 2,7-dihydro dichlorofluorescein sodium Diacetate (DCFH-DA): 0.3mg, is divided in brown centrifuge tube, keeps in Dark Place, and adds aseptic double-distilled water and is settled to 3mL, and dark place filters sterilization, now with the current;
Two, uviolizing is measured on the impact of ROS content in Saccharomyces cerevisiae
1. pair yeast saccharomyces cerevisiae carries out uv irradiating
A () cultured bacterium liquid, in 4 DEG C, the centrifugal 10min of 5500r/min, discards supernatant liquid, reagent A cleaning twice, then uses reagent A suspended yeast cell precipitation thing, waits until uv irradiation and injects process.
B () uses the bacteria suspension in sterilized water dilution step (a), get 2 mL in the sterile petri dish of U=75 mm, be placed in 30cm place under 30W ultraviolet lamp, radiation treatment respectively: 30 s, 45 s, 90 s, 120 s, 180 s, 240 s, each process repetition 3 times, leaves standstill 30min after each uv irradiating in dark culturing case.Compare not carry out irradiation, the later operation of uviolizing is carried out all in the dark, prevents light reparation.The bacterium liquid of acquisition is named ck1, a1, b1, c1, d1, e1, f1 successively.
2. kit measurement
A () gets tested bacterium liquid ck1, a1, b1, c1, d1, e1, f1.Each 1mL, in 4 DEG C, the centrifugal 10min of 5500r/min, discards supernatant liquid, bacterial sediment reagent A cleaning, then suspends by 1mL reagent A, obtains bacteria suspension, for subsequent use;
B reagent C fully mixes with reagent E by (), add reagent C+E in 48 orifice plates, and addition is 500-1000 μ l/ hole;
Add 30 μ l reagent B in c bacteria suspension that () obtains to step (a), place 10min in 37 DEG C of lucifuges, with the sieved filter of 300 order copper after, detect on flow cytometer, collect with ready 48 orifice plates in step (b), each hole collection 1 × 10 4individual thalline; Put into constant-temperature table, 37 DEG C, 250r/min cultivates 24h;
D reagent D fully mixes with reagent F by (), point to be filled in 48 aseptic 10mL centrifuge tubes, 5mL/ manages;
E bacterium liquid that () will obtain in step (c), add to one to one in the ready centrifuge tube of step (d) institute, 1000 μ l/ manage; Put into constant-temperature table, 37 DEG C, 150r/min cultivates 60h;
Three, detected result is as shown in table 2.
Table 2:
Uv irradiation time (s) 0 30 45 90 120 180 240
DCF fluorescence intensity 65.38 142.38 234.65 348.69 473.82 643.19 753.28
Embodiment 3
With test kit high flux screening producing and ethanol yeast saccharomyces cerevisiae of the present invention
One, mutagenesis is carried out to yeast saccharomyces cerevisiae
Be that laboratory screening obtains by starting strain used for starting strain Saccharomyces Cerevisiae in S 23(, reported in patent 201410495426.9, and the present invention be only exemplarily, does not relate to the protection of concrete bacterial strain) make cell suspension, adjustment cell concn is 10 6individual/milliliter, then by bacterium liquid in 4 DEG C, the centrifugal 10min of 5500r/min, discard supernatant liquid, reagent A cleaning twice, then uses reagent A suspended yeast cell precipitation thing, carries out mutagenic treatment.Mutagenic treatment is: the process of different uv irradiating intensity illumination, and different ions bundle injects process, then selects different mutagenic bacteria liquid and adds up to 48 parts.
Two, test kit screening
A () gets each 1mL of bacterium liquid after mutagenesis in 4 DEG C, the centrifugal 10min of 5500r/min, discard supernatant liquid, bacterial sediment reagent A cleaning, then suspends by 1mL reagent A, obtains bacteria suspension, for subsequent use;
B reagent C fully mixes with reagent E by (), add reagent C+E in 48 orifice plates, and addition is 500-1000 μ l/ hole;
30 μ l reagent B are added in c bacteria suspension that () obtains to step (a), 10min is placed in 37 DEG C of lucifuges, after the sieved filter of 300 order copper, detect on flow cytometer, collect with ready 48 orifice plates in step (b), collect the thalline that DCF fluorescence intensity is less than 200, each hole collects 1 × 10 4individual thalline, puts into constant-temperature table, 37 DEG C, and 250r/min cultivates 24h;
D reagent D fully mixes with reagent F by (), point to be filled in 48 aseptic 10mL centrifuge tubes, 5mL/ manages;
E bacterium liquid that () will obtain in step (c), add to one to one in the ready centrifuge tube of step (d) institute, 1000 μ l/ manage; Put into constant-temperature table, 37 DEG C, 150r/min cultivates 60h;
Ethanol content in f fermented liquid that () determination step (e) obtains, screens high-proof bacterial strain.
Three, experimental result
In the 48 strain bacterium liquid simultaneously screened, ethanol content (mL/L) is as shown in table 3 respectively, and wherein the ethanol content of starting strain is 60 mL/L.
Table 3:
[60,70) [70,80) [80,90) [90,100) [100,110) [110,120) [120,+∞)
2 2 4 7 18 9 6
In table [a, b) for scope is between a and b, comprise a, but do not comprise b.As can be seen from Table 3, obtain the yeast of different producing and ethanol ability without mutagenesis, use this test kit to screen, can investigate the fermentation capacity of multi-strain bacteria strain, reagent dosage is few, and screening efficiency is high simultaneously.
Above embodiment is only to further explanation explanation of the present invention; not as limiting the scope of the invention; test kit of the present invention can select the hole count of Tissue Culture Plate and the number of centrifuge tube according to the number of test strains; the screening of producing and ethanol ability is carried out to the bacterial strain of different mutagenic condition simultaneously; simple to operate; reagent dosage is few, and screening efficiency is high, greatly reduces labour payment.

Claims (8)

1. based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, comprise box body and reagent, it is characterized in that: also comprise Tissue Culture Plate, centrifuge tube and copper sieve, described reagent comprises each one bottle of reagent A, B, C, D, E, F:
Reagent A: citric acid: 6.15g; Trisodium Citrate: 17.544g; Add distilled water and be settled to 1000mL, encapsulate after autoclaving;
Reagent B: propidium iodide: 0.3mg; 2,7-dihydro dichlorofluorescein sodium Diacetate: 0.3mg;
Reagent C: glucose: 2g, adds distilled water and is settled to 50mL, encapsulate after autoclaving;
Reagent D: glucose: 12g, adds distilled water and is settled to 50mL, encapsulate after autoclaving;
Reagent E: yeast powder: 0.5g; Tryptones: 0.5g; Secondary ammonium phosphate: 0.05g; Magnesium sulfate: 0.025g, adds distilled water 40mL and dissolves, and regulates pH to 5.5, then is settled to 50mL with distilled water, encapsulate after autoclaving by NaOH solution;
Reagent F: yeast powder: 0.05g; Tryptones: 0.05g; Secondary ammonium phosphate: 0.05g; Magnesium sulfate: 0.025g, adds distilled water 40mL and dissolves, and regulates pH to 5.5, then is settled to 50mL with distilled water, encapsulate after autoclaving by NaOH solution.
2. according to claim 1 based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, it is characterized in that: described Tissue Culture Plate is 48 hole ~ 96 porocyte culture plates.
3. according to claim 1 based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, it is characterized in that: described centrifuge tube is 0.5 ~ 1.5mL centrifuge tube.
4. according to claim 1 based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, it is characterized in that: described copper sieve is 200 ~ 400 orders.
5. according to claim 1 based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, it is characterized in that: described Tissue Culture Plate is 1 ~ 2 piece, centrifuge tube is 48 ~ 96, and copper sieves 1.
6. according to claim 1 based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, it is characterized in that: described reagent B is divided in brown centrifuge tube.
7. according to claim 1 based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi, it is characterized in that: described NaOH solution concentration is 1 ~ 5mol/L.
8. screening the application in producing and ethanol fungi based on the test kit of Flow Cytometry high flux screening producing and ethanol fungi described in any one in claim 1 ~ 7.
CN201410753166.0A 2014-12-11 2014-12-11 Kit for high-throughput screening of ethanol-producing fungi based on flow cytometry and application thereof Expired - Fee Related CN104560725B (en)

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CN106191029A (en) * 2016-07-26 2016-12-07 江南大学 A kind of method of high flux screening chlortetracycline superior strain based on flow cytometry
CN106191028A (en) * 2016-07-26 2016-12-07 江南大学 A kind of method of high flux screening high yield tylosin bacterial strain based on flow cytometry
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CN111693499A (en) * 2020-06-11 2020-09-22 北京市农林科学院 Active oxygen free radical detection method for edible fungus hyphae and application of active oxygen free radical detection method in strain viability detection

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